Advanced Search (OLGA)

Gene: CASP7 (caspase 7) Sus scrofa

Analyze

Symbol:

CASP7

Name:

caspase 7

RGD ID:

14118813

Description:

ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); execution phase of apoptosis (ortholog); fibroblast apoptotic process (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; glutathione metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); nucleus (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

caspase-7; caspase-7 isoform alpha

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	CASP7 (caspase 7)	HGNC	Ensembl, NCBI, OrthoDB
Mus musculus (house mouse):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	CASP7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Casp7 (caspase 7)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Sscrofa11.1 - Pig Sscrofa11.1 Assembly

Position:

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	124,019,164 - 124,050,365 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	124,017,776 - 124,050,369 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

acute myeloid leukemia (ISO)

acute myocardial infarction (ISO)

Alzheimer's disease (ISO)

breast cancer (ISO)

Breast Neoplasms (ISO)

chemical colitis (ISO)

colon cancer (ISO)

Diabetic Nephropathies (ISO)

endometritis (ISO)

Endotoxemia (ISO)

Experimental Liver Cirrhosis (ISO)

Experimental Mammary Neoplasms (ISO)

Kidney Reperfusion Injury (ISO)

Lung Neoplasms (ISO)

lung non-small cell carcinoma (ISO)

Myocardial Reperfusion Injury (ISO)

Osteoarthritis, Experimental (ISO)

Retina Reperfusion Injury (ISO)

retinitis pigmentosa (ISO)

rheumatoid arthritis (ISO)

sciatic neuropathy (ISO)

Spinocerebellar Ataxias (ISO)

transient cerebral ischemia (ISO)

type 2 diabetes mellitus (ISO)

ureteral obstruction (ISO)

vitiligo (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IBA,IEA)

cellular response to lipopolysaccharide (IEA)

cellular response to staurosporine (IEA)

defense response to bacterium (IEA,ISO)

execution phase of apoptosis (IBA,IEA,ISO)

fibroblast apoptotic process (IEA,ISO)

heart development (IEA,ISO)

leukocyte apoptotic process (ISO)

lymphocyte apoptotic process (IEA)

neuron apoptotic process (IEA,ISO)

positive regulation of neuron apoptotic process (IBA)

positive regulation of plasma membrane repair (IEA,ISO)

protein catabolic process (IEA,ISO)

protein maturation (IEA)

protein processing (IEA,ISO)

proteolysis (IEA)

response to UV (IEA,ISO)

striated muscle cell differentiation (ISO)

Cellular Component

cytoplasm (IBA,IEA)

cytosol (IEA,ISO)

extracellular space (IEA,ISO)

fibrillar center (IEA)

nucleoplasm (IEA)

nucleus (IEA,ISO)

plasma membrane (IEA)

Molecular Function

aspartic-type endopeptidase activity (IEA)

cysteine-type endopeptidase activity (IBA,IEA)

cysteine-type peptidase activity (IEA,ISO)

peptidase activity (IEA)

protein binding (ISO)

RNA binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

extrinsic apoptotic pathway (ISO)

FasL mediated signaling pathway (ISO)

glutathione metabolic pathway (ISO)

glutathione synthase deficiency pathway (ISO)

glutathionuria disease pathway (ISO)

intrinsic apoptotic pathway (ISO)

Trail mediated signaling pathway (ISO)

References

Additional References at PubMed

PMID:14681463	PMID:17145712	PMID:22301074	PMID:24282594	PMID:30032202

Genomics

Comparative Map Data

CASP7
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	124,019,164 - 124,050,365 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	124,017,776 - 124,050,369 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

CASP7
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	113,679,194 - 113,730,909 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	113,679,162 - 113,730,907 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	115,438,953 - 115,490,668 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	115,428,925 - 115,480,654 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	115,428,952 - 115,480,652	NCBI
Celera	10	109,166,297 - 109,218,022 (+)	NCBI		Celera
Cytogenetic Map	10	q25.3	NCBI
HuRef	10	109,065,803 - 109,118,487 (+)	NCBI		HuRef
CHM1_1	10	115,720,952 - 115,772,694 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	114,571,036 - 114,622,770 (+)	NCBI		T2T-CHM13v2.0

Casp7
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	56,382,640 - 56,430,780 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	56,385,561 - 56,430,776 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	56,396,833 - 56,442,348 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	56,397,129 - 56,442,344 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	56,471,619 - 56,516,834 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	56,450,379 - 56,495,594 (+)	NCBI		MGSCv36	mm8
Celera	19	58,584,433 - 58,629,610 (+)	NCBI		Celera
Cytogenetic Map	19	D2	NCBI
cM Map	19	51.84	NCBI

Casp7
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	265,442,647 - 265,481,938 (+)	NCBI		GRCr8
mRatBN7.2	1	255,437,438 - 255,476,737 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	255,437,172 - 255,476,729 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	263,654,318 - 263,686,579 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	270,360,357 - 270,392,618 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	263,006,435 - 263,038,671 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	277,190,557 - 277,242,779 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	277,190,964 - 277,242,774 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	284,572,208 - 284,623,736 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	262,689,300 - 262,721,591 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	262,900,344 - 262,932,633 (+)	NCBI
Celera	1	251,144,026 - 251,176,065 (+)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

Casp7
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	18,686,190 - 18,723,524 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	18,685,408 - 18,723,221 (+)	NCBI	ChiLan1.0	ChiLan1.0

CASP7
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	125,557,882 - 125,609,366 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	125,563,218 - 125,614,702 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	110,273,318 - 110,324,800 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	113,707,188 - 113,758,630 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	113,707,780 - 113,758,626 (+)	Ensembl	panpan1.1		panPan2

CASP7
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	24,599,866 - 24,630,018 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	24,599,493 - 24,628,668 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	24,751,150 - 24,781,371 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	25,131,618 - 25,161,826 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	25,131,720 - 25,161,823 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	24,688,961 - 24,719,167 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	24,696,885 - 24,727,323 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	24,896,252 - 24,926,727 (+)	NCBI		UU_Cfam_GSD_1.0

Casp7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	21,446,342 - 21,478,385 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	4,088,372 - 4,114,955 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	4,082,664 - 4,114,942 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CASP7
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	106,558,291 - 106,607,662 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	106,559,445 - 106,607,663 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	67,773,257 - 67,822,203 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Casp7
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	32,852,835 - 32,887,069 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	32,853,354 - 32,888,881 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CASP7
746 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	mesenchyme	mesoderm	nervous system	renal system	reproductive system	respiratory system
10	4	23	3	2	5	14	12	23	3	6	3

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021073318	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073319	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073320	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073321	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073322	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021073323	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AEMK02000096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK233348	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK390856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK400390	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CU012038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	GACC01000153	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	HF566398	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSSCT00000051241 ⟹ ENSSSCP00000032262

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	124,023,972 - 124,050,365 (+)	Ensembl

Ensembl Acc Id:

ENSSSCT00000056242 ⟹ ENSSSCP00000043126

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1 Ensembl	14	124,019,164 - 124,049,033 (+)	Ensembl

RefSeq Acc Id:

XM_021073318 ⟹ XP_020928977

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,018,451 - 124,050,369 (+)	NCBI

Sequence:

show sequence

GGGTCCCGAGTCGGAGGCGGGGCCCGCAGCCCCGCCCGCCGGGTCGGCGTCCTGCCCGGGGCGA
CTCCTCCCCTGGCCGCGTTGCGGCTTTACTTTCGCTTTCGTTGGAGCGGCCGCAGACCCTCGGG
GCGGAGGGACTGAGACAGCACCAGTTCTGGACGCCGTGGGAACGATGGCAGACGATCAAGACTG
TGTCGTCCAGCAGGGGGCTGGGGACTCAGAAAGCAGAGATACGGTTGATGCGAAGCCAGACCGG
TCCTCTTTTGTCCAGTCACTCTTCAAGGAGCTGTCCTGGAGTGGGGAGGATGCAGCCATGTGGA
GCCTGGGCATTTCTGCCGGTCAGCAGAGAAGGCGGAGGCCAGTGTGACTTTCCCAGCCCCAGTG
TCCTATGGAAAACTCCAGCGTGCAGTTCACTGCTGATTCAGGCACAGGCCTTCAGGGCCGGGCC
GGCTGTGCCAGTCTTCTGTCCCTGCTCGGCTCCGAGCATGTTGAGTTTTTATTATTTCAGAGAA
GAAGGAAACTCGCTGCCTGCTGTCACAGGGCGAAGCCTAGTTCTGATGCAGAGAGAGATGCTTT
CCGATGGAGACATGAGTAAGAAGAAGAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGA
CCGAGAGCCTACGTTTCAGTATAACATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAAC
AACAAGAACTTCGACAGAATGACAGGAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGG
CTCTTTTCAAGTGCTTCCGAAGCCTGGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGC
CAAGATGCAAGATCTGCTGAAAAAAGCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCC
TGCATCTTATTAAGCCACGGAGAAGAAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAA
AGGACCTGACGGTGCATTTTAGGGGGGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTT
CTTCATTCAGGCTTGCCGGGGCACGGAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATC
AATGACACAGATGCTAATCCCCGGTATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATT
CCACAGTTCCAGGCTATTACTCATGGAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCT
CTGCTCCATCCTGAACGAGCACGGGAAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAAT
GACCGGGTGGCCAGGCACTTTGAATCCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGA
TCCCCTGTGTGGTTTCCATGCTCACCAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCG
CATTCTAGCTGAGAGGTTACGGATCACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGG
GATACTCTTGAAAGATCCGGAAATTCTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACG
GGAAAGAAACTTTCTGGTGCTGTCCTACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACAT
TGTTATCCATTTGATGACTTAAGATTAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACAC
TTAGTACATACAACAAAAGTGACCTCTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGG
TGACATTGGTCAACTCTTAGAGTCATATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGC
CAAAGGGATATTCATTCGCCTGTATTGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTT
TTCATTGGCTTAGGGCAGATTCTCATGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGG
CGGGGGGGGAGTGTAATGATTCTAATATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCA
TTCTGAGTGTTTCAGTAGAGGGAATTTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGA
TCAATAAAAGGAAGCTCTTGCCACCTAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGC
TGGGGTTGTCCACAGGAGCTGGAACCATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGG
TGTTGTAGGAAATGGAACTGTGCCAGGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATG
ACTCAGACATGGAAATATACCCTGGTTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGAC
CTTGGCCCTTTCAGCCCCAGCTGGGAGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGC
AGTACAGAGCACAGCAAGGGGCAGTGAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAA
GTGAAGAGAAGGAATCCTTTTCCCTGTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGA
GTTGTCAGATAATCTGTGTATTGCCGACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATA
TCTGGAACTTTTTAGGTTATTCCAAGCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCT
CTAAATTGGGGAGGGTTGATGGCGAAGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTT
GAATTCCTGATAAATTACTGTTTTATTCTGCCTAATAACTTGTTAACAAACATTTATATTTATT
GATTAAAATGCGATTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_021073319 ⟹ XP_020928978

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,019,117 - 124,050,369 (+)	NCBI

Sequence:

show sequence

GTAAGCTCCTGTCATCCCCTCATCACTGTGCCTGGTGCAGGGCGCTGGAAGATTCTTTGAGGAA
GTGGAAGAAGGCAGGACTCTCAGGCTGCAGCTCTTCGCCGTTGTATTCACCTTTGGCTTTTGTG
GGGCAGTAAAATTATTTGTGGATGGCAGACGATCAAGACTGTGTCGTCCAGCAGGGGGCTGGGG
ACTCAGAAAGCAGAGATACGGTTGATGCGAAGCCAGACCGGTCCTCTTTTGTCCAGTCACTCTT
CAAGGAGCTGTCCTGGAGTGGGGAGGATGCAGCCATGTGGAGCCTGGGCATTTCTGCCGGTCAG
CAGAGAAGGCGGAGGCCAGTGTGACTTTCCCAGCCCCAGTGTCCTATGGAAAACTCCAGCGTGC
AGTTCACTGCTGATTCAGGCACAGGCCTTCAGGGCCGGGCCGGCTGTGCCAGTCTTCTGTCCCT
GCTCGGCTCCGAGCATGTTGAGTTTTTATTATTTCAGAGAAGAAGGAAACTCGCTGCCTGCTGT
CACAGGGCGAAGCCTAGTTCTGATGCAGAGAGAGATGCTTTCCGATGGAGACATGAGTAAGAAG
AAGAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGACCGAGAGCCTACGTTTCAGTATA
ACATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAACAACAAGAACTTCGACAGAATGAC
AGGAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGGCTCTTTTCAAGTGCTTCCGAAGC
CTGGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGCCAAGATGCAAGATCTGCTGAAAA
AAGCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCCTGCATCTTATTAAGCCACGGAGA
AGAAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAAAGGACCTGACGGTGCATTTTAGG
GGGGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCGGGGCA
CGGAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATCAATGACACAGATGCTAATCCCCG
GTATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATTCCACAGTTCCAGGCTATTACTCA
TGGAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAACGAGCACG
GGAAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAATGACCGGGTGGCCAGGCACTTTGA
ATCCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGATCCCCTGTGTGGTTTCCATGCTC
ACCAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCGCATTCTAGCTGAGAGGTTACGGA
TCACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGGGATACTCTTGAAAGATCCGGAAA
TTCTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACGGGAAAGAAACTTTCTGGTGCTGT
CCTACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACATTGTTATCCATTTGATGACTTAAG
ATTAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACACTTAGTACATACAACAAAAGTGAC
CTCTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGGTGACATTGGTCAACTCTTAGAGT
CATATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGCCAAAGGGATATTCATTCGCCTGT
ATTGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTTTTCATTGGCTTAGGGCAGATTCT
CATGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGGCGGGGGGGGAGTGTAATGATTCT
AATATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCATTCTGAGTGTTTCAGTAGAGGGA
ATTTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGATCAATAAAAGGAAGCTCTTGCCA
CCTAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGCTGGGGTTGTCCACAGGAGCTGGA
ACCATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGGTGTTGTAGGAAATGGAACTGTGC
CAGGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATGACTCAGACATGGAAATATACCCT
GGTTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGACCTTGGCCCTTTCAGCCCCAGCTG
GGAGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGCAGTACAGAGCACAGCAAGGGGCA
GTGAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAAGTGAAGAGAAGGAATCCTTTTCC
CTGTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGAGTTGTCAGATAATCTGTGTATTG
CCGACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATATCTGGAACTTTTTAGGTTATTCC
AAGCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCTCTAAATTGGGGAGGGTTGATGGC
GAAGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTTGAATTCCTGATAAATTACTGTTT
TATTCTGCCTAATAACTTGTTAACAAACATTTATATTTATTGATTAAAATGCGATTGCTTAATT
CCTAA

hide sequence

RefSeq Acc Id:

XM_021073320 ⟹ XP_020928979

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,017,870 - 124,050,369 (+)	NCBI

Sequence:

show sequence

AGGAAGGCGCGTCAGCGAATGGAAATGGCAGACGATCAAGACTGTGTCGTCCAGCAGGGGGCTG
GGGACTCAGAAAGCAGAGATACGGTTGATGCGAAGCCAGACCGGTCCTCTTTTGTCCAGTCACT
CTTCAAGGAGCTGTCCTGGAGTGGGGAGGATGCAGCCATGTGGAGCCTGGGCATTTCTGCCGGT
CAGCAGAGAAGGCGGAGGCCAGTGTGACTTTCCCAGCCCCAGTGTCCTATGGAAAACTCCAGCG
TGCAGTTCACTGCTGATTCAGGCACAGGCCTTCAGGGCCGGGCCGGCTGTGCCAGTCTTCTGTC
CCTGCTCGGCTCCGAGCATGTTGAGTTTTTATTATTTCAGAGAAGAAGGAAACTCGCTGCCTGC
TGTCACAGGGCGAAGCCTAGTTCTGATGCAGAGAGAGATGCTTTCCGATGGAGACATGAGTAAG
AAGAAGAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGACCGAGAGCCTACGTTTCAGT
ATAACATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAACAACAAGAACTTCGACAGAAT
GACAGGAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGGCTCTTTTCAAGTGCTTCCGA
AGCCTGGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGCCAAGATGCAAGATCTGCTGA
AAAAAGCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCCTGCATCTTATTAAGCCACGG
AGAAGAAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAAAGGACCTGACGGTGCATTTT
AGGGGGGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCGGG
GCACGGAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATCAATGACACAGATGCTAATCC
CCGGTATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATTCCACAGTTCCAGGCTATTAC
TCATGGAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAACGAGC
ACGGGAAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAATGACCGGGTGGCCAGGCACTT
TGAATCCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGATCCCCTGTGTGGTTTCCATG
CTCACCAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCGCATTCTAGCTGAGAGGTTAC
GGATCACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGGGATACTCTTGAAAGATCCGG
AAATTCTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACGGGAAAGAAACTTTCTGGTGC
TGTCCTACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACATTGTTATCCATTTGATGACTT
AAGATTAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACACTTAGTACATACAACAAAAGT
GACCTCTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGGTGACATTGGTCAACTCTTAG
AGTCATATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGCCAAAGGGATATTCATTCGCC
TGTATTGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTTTTCATTGGCTTAGGGCAGAT
TCTCATGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGGCGGGGGGGGAGTGTAATGAT
TCTAATATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCATTCTGAGTGTTTCAGTAGAG
GGAATTTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGATCAATAAAAGGAAGCTCTTG
CCACCTAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGCTGGGGTTGTCCACAGGAGCT
GGAACCATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGGTGTTGTAGGAAATGGAACTG
TGCCAGGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATGACTCAGACATGGAAATATAC
CCTGGTTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGACCTTGGCCCTTTCAGCCCCAG
CTGGGAGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGCAGTACAGAGCACAGCAAGGG
GCAGTGAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAAGTGAAGAGAAGGAATCCTTT
TCCCTGTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGAGTTGTCAGATAATCTGTGTA
TTGCCGACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATATCTGGAACTTTTTAGGTTAT
TCCAAGCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCTCTAAATTGGGGAGGGTTGAT
GGCGAAGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTTGAATTCCTGATAAATTACTG
TTTTATTCTGCCTAATAACTTGTTAACAAACATTTATATTTATTGATTAAAATGCGATTGCTTA
ATTCCTAA

hide sequence

RefSeq Acc Id:

XM_021073321 ⟹ XP_020928980

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,017,869 - 124,050,369 (+)	NCBI

Sequence:

show sequence

GAGGAAGGCGCGTCAGCGAATGGAAATGGCAGACGATCAAGACTGTGTCGTCCAGCAGGGGGCT
GGGGACTCAGAAAGCAGAGATACGGTTGATGCGAAGCCAGACCGGTCCTCTTTTGTCCAGTCAC
TCTTCAATAAGAAGAAGAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGACCGAGAGCC
TACGTTTCAGTATAACATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAACAACAAGAAC
TTCGACAGAATGACAGGAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGGCTCTTTTCA
AGTGCTTCCGAAGCCTGGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGCCAAGATGCA
AGATCTGCTGAAAAAAGCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCCTGCATCTTA
TTAAGCCACGGAGAAGAAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAAAGGACCTGA
CGGTGCATTTTAGGGGGGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCA
GGCTTGCCGGGGCACGGAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATCAATGACACA
GATGCTAATCCCCGGTATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATTCCACAGTTC
CAGGCTATTACTCATGGAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCAT
CCTGAACGAGCACGGGAAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAATGACCGGGTG
GCCAGGCACTTTGAATCCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGATCCCCTGTG
TGGTTTCCATGCTCACCAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCGCATTCTAGC
TGAGAGGTTACGGATCACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGGGATACTCTT
GAAAGATCCGGAAATTCTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACGGGAAAGAAA
CTTTCTGGTGCTGTCCTACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACATTGTTATCCA
TTTGATGACTTAAGATTAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACACTTAGTACAT
ACAACAAAAGTGACCTCTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGGTGACATTGG
TCAACTCTTAGAGTCATATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGCCAAAGGGAT
ATTCATTCGCCTGTATTGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTTTTCATTGGC
TTAGGGCAGATTCTCATGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGGCGGGGGGGG
AGTGTAATGATTCTAATATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCATTCTGAGTG
TTTCAGTAGAGGGAATTTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGATCAATAAAA
GGAAGCTCTTGCCACCTAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGCTGGGGTTGT
CCACAGGAGCTGGAACCATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGGTGTTGTAGG
AAATGGAACTGTGCCAGGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATGACTCAGACA
TGGAAATATACCCTGGTTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGACCTTGGCCCT
TTCAGCCCCAGCTGGGAGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGCAGTACAGAG
CACAGCAAGGGGCAGTGAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAAGTGAAGAGA
AGGAATCCTTTTCCCTGTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGAGTTGTCAGA
TAATCTGTGTATTGCCGACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATATCTGGAACT
TTTTAGGTTATTCCAAGCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCTCTAAATTGG
GGAGGGTTGATGGCGAAGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTTGAATTCCTG
ATAAATTACTGTTTTATTCTGCCTAATAACTTGTTAACAAACATTTATATTTATTGATTAAAAT
GCGATTGCTTAATTCCTAA

hide sequence

RefSeq Acc Id:

XM_021073322 ⟹ XP_020928981

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,017,776 - 124,050,369 (+)	NCBI

Sequence:

show sequence

GAATGATTCTGGCGCTACGTCCCGGCCAGCAGGCTCTGTTAAGAGGTGTGGACGTGCTCTGCAG
AAAACTGTTAGTTCCTGCCGCCCACGCGTGAGGAAGGCGCGTCAGCGAATGGAAGCAAGTTCTG
AGCGGCAGGAGACCACGGCGGCTCCCTCGGCTGGCCCTAGGGAGACGGTAACTCAGGAAGATGC
GGGCACCCAGTCCCCCGCATAGACGATCAGGGTCAGGATTTGGCTGAGGAGGAGCCGTTGGGCC
TTTGGAACAGGTCCCAGGGCCGGTGCGGAGGCCGAAGTCGCGGTGTAGACCGGAGGCAGCGGGA
GGGCAGGAAGGTGGACTCTGACCAGCGCCCCATTATCAAGCGCCGCGAAGTCGGCAGGGCGCAC
TCTTCAGTCCGCCCGACTGGGACGCTGCGTGCGCCGGGTCTGCGGAGCGCGCCCTTCAGGTCAC
TTGGAGCGCAGTGGACGCTGCAGAACTTTCTCCTGGAGATTGCGCGCGCAGCTCCGGGACCCCT
GTGGATCTCTGCAAACTTTGCCCAGGACGCGTCCGGTGCGCGCGACCAGCTTTGCCTGCCGAGG
GCGCCCTCCGCGACGACGCGCGCGACCGTGAGAGCGCGCCCTCCCCGACGGGGCGCGGCGGCGC
GGTGGTCCCGCGCGCGGCCGACTCTGAGAAGCGCGGGGTCCCGAGTCGGAGGCGGGGCCCGCAG
CCCCGCCCGCCGGGTCGGCGTCCTGCCCGGGGCGACTCCTCCCCTGGCCGCGTTGCGGCTTTAC
TTTCGCTTTCGTTGGAGCGGCCGCAGACCCTCGGGGCGGAGGGACTGAGACAGCACCAGTTCTG
GACGCCGTGGGAACGATGGCAGACGATCAAGACTGTGTCGTCCAGCAGGGGGCTGGGGACTCAG
AAAGCAGAGATACGGTTGATGCGAAGCCAGACCGGTCCTCTTTTGTCCAGTCACTCTTCAATAA
GAAGAAGAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGACCGAGAGCCTACGTTTCAG
TATAACATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAACAACAAGAACTTCGACAGAA
TGACAGGAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGGCTCTTTTCAAGTGCTTCCG
AAGCCTGGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGCCAAGATGCAAGATCTGCTG
AAAAAAGCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCCTGCATCTTATTAAGCCACG
GAGAAGAAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAAAGGACCTGACGGTGCATTT
TAGGGGGGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCGG
GGCACGGAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATCAATGACACAGATGCTAATC
CCCGGTATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATTCCACAGTTCCAGGCTATTA
CTCATGGAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAACGAG
CACGGGAAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAATGACCGGGTGGCCAGGCACT
TTGAATCCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGATCCCCTGTGTGGTTTCCAT
GCTCACCAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCGCATTCTAGCTGAGAGGTTA
CGGATCACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGGGATACTCTTGAAAGATCCG
GAAATTCTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACGGGAAAGAAACTTTCTGGTG
CTGTCCTACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACATTGTTATCCATTTGATGACT
TAAGATTAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACACTTAGTACATACAACAAAAG
TGACCTCTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGGTGACATTGGTCAACTCTTA
GAGTCATATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGCCAAAGGGATATTCATTCGC
CTGTATTGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTTTTCATTGGCTTAGGGCAGA
TTCTCATGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGGCGGGGGGGGAGTGTAATGA
TTCTAATATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCATTCTGAGTGTTTCAGTAGA
GGGAATTTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGATCAATAAAAGGAAGCTCTT
GCCACCTAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGCTGGGGTTGTCCACAGGAGC
TGGAACCATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGGTGTTGTAGGAAATGGAACT
GTGCCAGGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATGACTCAGACATGGAAATATA
CCCTGGTTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGACCTTGGCCCTTTCAGCCCCA
GCTGGGAGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGCAGTACAGAGCACAGCAAGG
GGCAGTGAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAAGTGAAGAGAAGGAATCCTT
TTCCCTGTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGAGTTGTCAGATAATCTGTGT
ATTGCCGACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATATCTGGAACTTTTTAGGTTA
TTCCAAGCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCTCTAAATTGGGGAGGGTTGA
TGGCGAAGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTTGAATTCCTGATAAATTACT
GTTTTATTCTGCCTAATAACTTGTTAACAAACATTTATATTTATTGATTAAAATGCGATTGCTT
AATTCCTAA

hide sequence

RefSeq Acc Id:

XM_021073323 ⟹ XP_020928982

Type:

CODING

Position:

Pig Assembly	Chr	Position (strand)	Source
Sscrofa11.1	14	124,018,617 - 124,050,369 (+)	NCBI

Sequence:

show sequence

GGAACGGTAACTTCGGCCGCCGCGCTTCCGCCCTGCCCTCCTTTCGCCCGCGTTCTCCCTGGCC
GTCCGGCTGCCCTCGCTCCTGCCACCCCGAGCGCCGTCGGTGGGATTCGATCCCCAGGGACTGG
GCGGCCCCGACGGCTCCACTGAACTTGAGGGAGAGAGCTCTGCCCGCCCCCAACATCACTTGCT
TGCTCAGCTTGTCCCTCCCTTCCCTCCTAGTCGCCGGGCTTGGGTCACCGGTGCTCTTCGGGAT
TTGGCAGAGAAGGGGGGATGGATTTGGAAGGGTGGGAAGGGCCTGGGCTGGCTAACAGTGAGAG
CTCCCTTGTGGGGCAGCCGTGGGTTCAGTCCCCCCCTCCCCCCCACTCTGTTTCTCTGCTGTGA
GGCCTTGGCCCTCTCTGTGCCCGTCTGTGTAATGGGGATAGTGGTGGGCCCGGGGTGGCGGCTG
CTGCGAGGATGGAGTGAGGGGGTTGGGGCGCAGAGCAGTGCTGTCAGGGTGTGTAAGCTCCTGT
CATCCCCTCATCACTGTGCCTGGTGCAGGGCGCTGGAAGATTCTTTGAGGAAGTGGAAGAAGGC
AGGACTCTCAGGCTGCAGCTCTTCGCCGTTGTATTCACCTTTGGCTTTTGTGGGGCAGTAAAAT
TATTTGTGGATGGCAGACGATCAAGACTGTGTCGTCCAGCAGGGGGCTGGGGACTCAGAAAGCA
GAGATACGGTTGATGCGAAGCCAGACCGGTCCTCTTTTGTCCAGTCACTCTTCAATAAGAAGAA
GAAAAGTGGCTCAGGGAGCTCAGTCAAGATCCCCCGGGACCGAGAGCCTACGTTTCAGTATAAC
ATGGATTTTGAGAAAGTGGGCAAATGCATCATCATTAACAACAAGAACTTCGACAGAATGACAG
GAATGGGTGTCCGCAACGGGACAGACAAAGATGCGGAGGCTCTTTTCAAGTGCTTCCGAAGCCT
GGGTTTCGATGTGACCGTCTATAACGACTGCTCTTGTGCCAAGATGCAAGATCTGCTGAAAAAA
GCTTCTGAGGAGGACCACCGAAATTCAGCCTGCTTCGCCTGCATCTTATTAAGCCACGGAGAAG
AAAATTTCATTTATGGAACAGATGGTGTGACAGCAATAAAGGACCTGACGGTGCATTTTAGGGG
GGATCGGTGCAAGACCCTTTTAGAGAAACCCAAACTCTTCTTCATTCAGGCTTGCCGGGGCACG
GAGCTCGATGACGGGATCCAGGCAGACTCGGGGCCTATCAATGACACAGATGCTAATCCCCGGT
ATAAGATCCCAGTTGAAGCCGACTTTCTCTTCGCCTATTCCACAGTTCCAGGCTATTACTCATG
GAGGAGCCCGGGGAGTGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAACGAGCACGGG
AAAAGCCTGGAGATCTTGCAGATCCTCACCAGGGTGAATGACCGGGTGGCCAGGCACTTTGAAT
CCCAGTCTGACGACCCTCGGTTCCACGAGAAGAAGCAGATCCCCTGTGTGGTTTCCATGCTCAC
CAAGGAACTCTACTTCTGAAGATGACCGTTTCAGGGGCGCATTCTAGCTGAGAGGTTACGGATC
ACTGGTTGATGAATCAGAAAAAAAAAAAAATTGGTGCGGGATACTCTTGAAAGATCCGGAAATT
CTGAAGGATTTTAATTTCAGGAAGATTACTAATTCAACGGGAAAGAAACTTTCTGGTGCTGTCC
TACGTTCTCTGAAATTTCAGGGACTTTCTCTTTTTACATTGTTATCCATTTGATGACTTAAGAT
TAATTTTCTGTTTGTCTCTCTTTCTCCTTGTTGTCACACTTAGTACATACAACAAAAGTGACCT
CTGCAGATGGCTTTTGGCTTTGTCCACTGTGATCGGTGGTGACATTGGTCAACTCTTAGAGTCA
TATTTGTACCTGGCAAAGAGTGCTTGACGAAAAAACAGCCAAAGGGATATTCATTCGCCTGTAT
TGCAGGCAGTGGGTACTGAGTGTGGTTTGAGTGATTTTTTTCATTGGCTTAGGGCAGATTCTCA
TGCAAAAATTCCCAGATATGTTATAGGGGTCGGGGGTGGCGGGGGGGGAGTGTAATGATTCTAA
TATGTAGCAGTCAGCATCTAGTCAGGAAAACAGAAGCCATTCTGAGTGTTTCAGTAGAGGGAAT
TTAAGAGAAATTGACATACATAGATGATGAAAGAGAAGATCAATAAAAGGAAGCTCTTGCCACC
TAAGGCTTTGAGGGGGTGTGATTCTTTGAGTCCAGAGGCTGGGGTTGTCCACAGGAGCTGGAAC
CATGGCAGGGGCTGGCTGGTGGAGCTAGTGCCCCTTAGGTGTTGTAGGAAATGGAACTGTGCCA
GGGACACAGCCACTGCCCCAGATGGGGCAACACCGGATGACTCAGACATGGAAATATACCCTGG
TTTCCCCTCTCCTTCTGGCCTTTAGTCTTTGTCCAGGACCTTGGCCCTTTCAGCCCCAGCTGGG
AGGGATCTGGCAAGGGCCCTGGGAAGTCTGGTTTCCTGCAGTACAGAGCACAGCAAGGGGCAGT
GAGTCAGGGGAGGAACAGGAAATAGGCCGGGCTTACAAAGTGAAGAGAAGGAATCCTTTTCCCT
GTGTTCAGTGATTCATCCATTCATTCCTTTATTCATTGAGTTGTCAGATAATCTGTGTATTGCC
GACCATGTGCCAAATAATTTGTTTCAGCTGGAAGATATATCTGGAACTTTTTAGGTTATTCCAA
GCCTTATTCTGGAGTAAAATTTTTGTTATCTCTAGTTCTCTAAATTGGGGAGGGTTGATGGCGA
AGATATTTGCACTGTGTTCCCAAAGTGGTGGTATCTTTTGAATTCCTGATAAATTACTGTTTTA
TTCTGCCTAATAACTTGTTAACAAACATTTATATTTATTGATTAAAATGCGATTGCTTAATTCC
TAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_020928977	(Get FASTA)	NCBI Sequence Viewer
	XP_020928978	(Get FASTA)	NCBI Sequence Viewer
	XP_020928979	(Get FASTA)	NCBI Sequence Viewer
	XP_020928980	(Get FASTA)	NCBI Sequence Viewer
	XP_020928981	(Get FASTA)	NCBI Sequence Viewer
	XP_020928982	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSSCP00000032262
	ENSSSCP00000032262.3
	ENSSSCP00000043126
	ENSSSCP00000043126.3
	ENSSSCP00015019260.1
	ENSSSCP00015019327.1
	ENSSSCP00025011973.1
	ENSSSCP00025011982.1
	ENSSSCP00030017912.1
	ENSSSCP00030017918.1
	ENSSSCP00035036963.1
	ENSSSCP00035036970.1
	ENSSSCP00035036974.1
	ENSSSCP00040042175.1
	ENSSSCP00040042284.1
	ENSSSCP00050024487.1
	ENSSSCP00050024495.1
	ENSSSCP00055046259.1
	ENSSSCP00055046290.1
	ENSSSCP00060023630.1
	ENSSSCP00060023637.1
	ENSSSCP00065033480.1
	ENSSSCP00065033486.1
	ENSSSCP00070010346.1
GenBank Protein	JAA53654	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_020928981 ⟸ XM_021073322
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1S241 (UniProtKB/TrEMBL), A0A286ZKY7 (UniProtKB/TrEMBL), K9J6J4 (UniProtKB/TrEMBL), A0A481B7T1 (UniProtKB/TrEMBL), A0A4X1T3I4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDQDCVVQQGAGDSESRDTVDAKPDRSSFVQSLFNKKKKSGSGSSVKIPRDREPTFQYNMDF EKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVYNDCSCAKMQDLLKKASE EDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELD DGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGSWFVQALCSILNEHGKSL EILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

RefSeq Acc Id:	XP_020928980 ⟸ XM_021073321
- Peptide Label:	isoform X2
- UniProtKB:	A0A481B7T1 (UniProtKB/TrEMBL), A0A4X1T3I4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MEMADDQDCVVQQGAGDSESRDTVDAKPDRSSFVQSLFNKKKKSGSGSSVKIPRDREPTFQYNM DFEKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVYNDCSCAKMQDLLKKA SEEDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTE LDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGSWFVQALCSILNEHGK SLEILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

RefSeq Acc Id:	XP_020928979 ⟸ XM_021073320
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1ZF64 (UniProtKB/TrEMBL), A0A8D0WBL3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSQTGPLLSSHSSRSCPGVGRMQPCGAWAFLPVSREGGGQCDFPSPSVLWKTPACSSLLIQAQ AFRAGPAVPVFCPCSAPSMLSFYYFREEGNSLPAVTGRSLVLMQREMLSDGDMSKKKKSGSGSS VKIPRDREPTFQYNMDFEKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVY NDCSCAKMQDLLKKASEEDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLL EKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGS WFVQALCSILNEHGKSLEILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

RefSeq Acc Id:	XP_020928977 ⟸ XM_021073318
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1ZF64 (UniProtKB/TrEMBL), A0A8D0WBL3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSQTGPLLSSHSSRSCPGVGRMQPCGAWAFLPVSREGGGQCDFPSPSVLWKTPACSSLLIQAQ AFRAGPAVPVFCPCSAPSMLSFYYFREEGNSLPAVTGRSLVLMQREMLSDGDMSKKKKSGSGSS VKIPRDREPTFQYNMDFEKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVY NDCSCAKMQDLLKKASEEDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLL EKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGS WFVQALCSILNEHGKSLEILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

RefSeq Acc Id:	XP_020928982 ⟸ XM_021073323
- Peptide Label:	isoform X3
- UniProtKB:	A0A8D1S241 (UniProtKB/TrEMBL), A0A286ZKY7 (UniProtKB/TrEMBL), K9J6J4 (UniProtKB/TrEMBL), A0A481B7T1 (UniProtKB/TrEMBL), A0A4X1T3I4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MADDQDCVVQQGAGDSESRDTVDAKPDRSSFVQSLFNKKKKSGSGSSVKIPRDREPTFQYNMDF EKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVYNDCSCAKMQDLLKKASE EDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLLEKPKLFFIQACRGTELD DGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGSWFVQALCSILNEHGKSL EILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

RefSeq Acc Id:	XP_020928978 ⟸ XM_021073319
- Peptide Label:	isoform X1
- UniProtKB:	A0A8D1ZF64 (UniProtKB/TrEMBL), A0A8D0WBL3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MRSQTGPLLSSHSSRSCPGVGRMQPCGAWAFLPVSREGGGQCDFPSPSVLWKTPACSSLLIQAQ AFRAGPAVPVFCPCSAPSMLSFYYFREEGNSLPAVTGRSLVLMQREMLSDGDMSKKKKSGSGSS VKIPRDREPTFQYNMDFEKVGKCIIINNKNFDRMTGMGVRNGTDKDAEALFKCFRSLGFDVTVY NDCSCAKMQDLLKKASEEDHRNSACFACILLSHGEENFIYGTDGVTAIKDLTVHFRGDRCKTLL EKPKLFFIQACRGTELDDGIQADSGPINDTDANPRYKIPVEADFLFAYSTVPGYYSWRSPGSGS WFVQALCSILNEHGKSLEILQILTRVNDRVARHFESQSDDPRFHEKKQIPCVVSMLTKELYF hide sequence

Ensembl Acc Id:

ENSSSCP00000032262 ⟸ ENSSSCT00000051241

Ensembl Acc Id:

ENSSSCP00000043126 ⟸ ENSSSCT00000056242

Protein Domains

Caspase family p10 Caspase family p20

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSSCG00000032408	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
	ENSSSCG00015036467	UniProtKB/TrEMBL
	ENSSSCG00025020843	UniProtKB/TrEMBL
	ENSSSCG00030027852	UniProtKB/TrEMBL
	ENSSSCG00035065518	UniProtKB/TrEMBL
	ENSSSCG00040069494	UniProtKB/TrEMBL
	ENSSSCG00050042204	UniProtKB/TrEMBL
	ENSSSCG00055029117	UniProtKB/TrEMBL
	ENSSSCG00060040824	UniProtKB/TrEMBL
	ENSSSCG00065056271	UniProtKB/TrEMBL
	ENSSSCG00070006578	UniProtKB/TrEMBL
Ensembl Transcript	ENSSSCT00000051241	ENTREZGENE
	ENSSSCT00000051241.3	UniProtKB/TrEMBL
	ENSSSCT00000056242	ENTREZGENE
	ENSSSCT00000056242.3	UniProtKB/TrEMBL
	ENSSSCT00015048428.1	UniProtKB/TrEMBL
	ENSSSCT00015048554.1	UniProtKB/TrEMBL
	ENSSSCT00025028291.1	UniProtKB/TrEMBL
	ENSSSCT00025028317.1	UniProtKB/TrEMBL
	ENSSSCT00030038933.1	UniProtKB/TrEMBL
	ENSSSCT00030038942.1	UniProtKB/TrEMBL
	ENSSSCT00035088454.1	UniProtKB/TrEMBL
	ENSSSCT00035088478.1	UniProtKB/TrEMBL
	ENSSSCT00035088483.1	UniProtKB/TrEMBL
	ENSSSCT00040095219.1	UniProtKB/TrEMBL
	ENSSSCT00040095431.1	UniProtKB/TrEMBL
	ENSSSCT00050057331.1	UniProtKB/TrEMBL
	ENSSSCT00050057341.1	UniProtKB/TrEMBL
	ENSSSCT00055057810.1	UniProtKB/TrEMBL
	ENSSSCT00055057846.1	UniProtKB/TrEMBL
	ENSSSCT00060055314.1	UniProtKB/TrEMBL
	ENSSSCT00060055333.1	UniProtKB/TrEMBL
	ENSSSCT00065077021.1	UniProtKB/TrEMBL
	ENSSSCT00065077037.1	UniProtKB/TrEMBL
	ENSSSCT00070012579.1	UniProtKB/TrEMBL
Gene3D-CATH	3.40.50.1460	UniProtKB/TrEMBL
InterPro	Caspase-like_dom_sf	UniProtKB/TrEMBL
	Caspase_cys_AS	UniProtKB/TrEMBL
	Caspase_his_AS	UniProtKB/TrEMBL
	Pept_C14_caspase	UniProtKB/TrEMBL
	Pept_C14_p10	UniProtKB/TrEMBL
	Pept_C14_p20	UniProtKB/TrEMBL
	Pept_C14A	UniProtKB/TrEMBL
NCBI Gene	CASP7	ENTREZGENE
PANTHER	PTHR10454	UniProtKB/TrEMBL
	PTHR10454:SF31	UniProtKB/TrEMBL
Pfam	Peptidase_C14	UniProtKB/TrEMBL
PRINTS	IL1BCENZYME	UniProtKB/TrEMBL
PROSITE	CASPASE_CYS	UniProtKB/TrEMBL
	CASPASE_HIS	UniProtKB/TrEMBL
	CASPASE_P10	UniProtKB/TrEMBL
	CASPASE_P20	UniProtKB/TrEMBL
SMART	CASc	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52129	UniProtKB/TrEMBL
UniProt	A0A286ZKY7	ENTREZGENE
	A0A287AGZ2_PIG	UniProtKB/TrEMBL
	A0A481B7T1	ENTREZGENE, UniProtKB/TrEMBL
	A0A4X1T3I4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D0WBL3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1S241	ENTREZGENE, UniProtKB/TrEMBL
	A0A8D1ZF64	ENTREZGENE, UniProtKB/TrEMBL
	K9J6J4	ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary	A0A286ZKY7	UniProtKB/TrEMBL
VGNC ID	VGNC:86203	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB

Send us a Message

Imported Disease Annotations - CTD

RGD Manual Annotations

Imported Annotations - SMPDB