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ONTOLOGY REPORT - ANNOTATIONS


Term:cellular response to biotic stimulus
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Accession:GO:0071216 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:narrow_synonym: cellular response to biotic stress


show annotations for term's descendants           Sort by:
 
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:3573941 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Tlr1 toll-like receptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:45,062,662...45,065,014
Ensembl chr14:45,062,662...45,081,991
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr6 toll-like receptor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:45,024,351...45,041,188
Ensembl chr14:45,024,351...45,046,446
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISS
ISO
GO_REF:0000024
(PMID:16880211)
UniProt
RGD
PMID:16880211 GO_REF:0000024 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd36 CD36 molecule involved_in ISO
ISS
(PMID:16880211)
GO_REF:0000024
RGD
UniProt
PMID:16880211 GO_REF:0000024 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO (PMID:16880211), (PMID:19931471) RGD PMID:16880211 PMID:19931471 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr6 toll-like receptor 6 involved_in ISO
IBA
(PMID:16880211), (PMID:19931471)
PMID:21873635
RGD PMID:16880211 PMID:19931471, PMID:21873635 RGD:13792537 NCBI chr14:45,024,351...45,041,188
Ensembl chr14:45,024,351...45,046,446
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:22,225,123...22,307,577
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Cda cytidine deaminase IEP K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 5:156,703,579...156,734,541
Ensembl chr 5:156,703,579...156,734,541
Ensembl chr 5:156,703,579...156,734,541
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr 5:69,857,717...69,983,042
Ensembl chr 5:69,857,771...69,983,015
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20300455 RGD:39456124 NCBI chr 4:22,339,829...22,517,642
Ensembl chr 4:22,133,521...22,425,515
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:263,554,426...263,612,556
Ensembl chr 1:263,554,453...263,613,252
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856663 (MGI:82358|PMID:8806812) RGD PMID:8806812 MGI:82358 NCBI chr 3:10,041,820...10,145,076
Ensembl chr 3:10,041,826...10,144,388
Ensembl chr 3:10,041,826...10,144,388
JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450), (PMID:23610393)
(MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
RGD PMID:23609450 PMID:23610393 MGI:5490395 MGI:5490396 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:71,810,377...71,887,926
Ensembl chr16:71,810,377...71,887,926
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166
JBrowse link
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:155,359,909...155,371,104
Ensembl chr 4:155,359,921...155,369,671
JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:5763364 NCBI chr 7:14,323,298...14,339,953
Ensembl chr 7:14,324,104...14,351,918
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)
RGD PMID:7730328 PMID:17239933 MGI:5294542 NCBI chr 1:254,726,985...254,745,673
Ensembl chr 1:254,726,969...254,735,548
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520
JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) RGD PMID:27671645 MGI:5887181 NCBI chr 9:42,871,907...42,886,725
Ensembl chr 9:42,871,950...42,884,855
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:82,550,892...82,580,761
Ensembl chr 1:82,549,420...82,580,761
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:114,087,287...114,093,311
Ensembl chr 3:114,087,287...114,093,309
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(PMID:16831874)
UniProt
RGD
PMID:16831874 GO_REF:0000024 NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (MGI:71493|PMID:7889565) RGD PMID:7889565 MGI:71493 NCBI chr20:14,421,250...14,546,406
Ensembl chr20:14,421,141...14,545,772
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:15,393,461...15,403,212
Ensembl chr 9:15,393,330...15,403,117
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:100,878,649...100,928,811
Ensembl chr13:100,878,650...100,928,811
JBrowse link
G Casp1 caspase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11536016)
Ensembl
RGD
PMID:11536016 GO_REF:0000107 NCBI chr 8:2,605,743...2,614,637
Ensembl chr 8:2,604,962...2,614,631
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO
(MGI:3699670|PMID:14662900) RGD PMID:14662900, PMID:8921263 MGI:3699670, RGD:8549522 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:88,918,359...88,921,017
Ensembl chr 9:88,918,433...88,921,001
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:10679098)
Ensembl
RGD
PMID:10679098 GO_REF:0000107 NCBI chr 8:133,192,398...133,215,599
Ensembl chr 8:133,197,032...133,215,614
JBrowse link
G Cd14 CD14 molecule involved_in IEP
ISO
ISS
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
GO_REF:0000024
(PMID:12594207), (PMID:8612135)
RGD
UniProt
PMID:8612135 PMID:12594207 PMID:24380872, PMID:22511970 GO_REF:0000024 MGI:5645195 MGI:80217, RGD:7183752 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3581654 (MGI:1860539|PMID:10880523)
RGD PMID:10880523, PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr 2:32,820,275...32,833,223
Ensembl chr 2:32,820,322...32,833,125
JBrowse link
G Cd274 CD274 molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:247,519,890...247,539,659
Ensembl chr 1:247,519,939...247,537,943
JBrowse link
G Cd300lb CD300 molecule-like family member b acts_upstream_of_or_within ISO MGI:4829592 (MGI:5446972|PMID:22772446) RGD PMID:22772446 MGI:5446972 NCBI chr10:103,471,082...103,481,071
Ensembl chr10:103,467,725...103,481,153
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:2447190 (MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704
JBrowse link
G Cd68 Cd68 molecule involved_in ISO (MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:6274946 NCBI chr10:56,268,726...56,270,605
Ensembl chr10:56,268,720...56,270,640
JBrowse link
G Cd80 Cd80 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3828894|PMID:19047410)
RGD PMID:19047410, PMID:21873635 MGI:3828894, RGD:13792537 NCBI chr11:64,815,201...64,855,293
Ensembl chr11:64,827,635...64,855,353
JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
(MGI:3828894|PMID:19047410)
PMID:21873635
RGD PMID:19047410, PMID:21039614, PMID:21873635 MGI:3828894, RGD:4892198, RGD:13792537 NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795
JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5319608|PMID:17911113)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17911113 GO_REF:0000024 GO_REF:0000107 MGI:5319608 NCBI chr13:60,403,771...60,496,511
Ensembl chr13:60,403,771...60,496,511
JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:45,458,499...45,598,799
Ensembl chr20:45,458,558...45,598,798
JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:78049 NCBI chr 7:70,345,971...70,352,689
Ensembl chr 7:70,349,863...70,352,418
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:164,424,502...164,425,933
Ensembl chr 3:164,424,515...164,425,910
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:33,356,119...33,357,517
Ensembl chr15:33,355,947...33,358,138
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within IEP
ISO
(MGI:4421084|PMID:19828624) RGD PMID:19828624, PMID:12121434 MGI:4421084, RGD:632369 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO
ISS
(PMID:27812135)
GO_REF:0000024
RGD
UniProt
PMID:27812135 GO_REF:0000024 NCBI chr 5:57,267,312...57,284,455
Ensembl chr 5:57,267,312...57,284,448
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) RGD PMID:7751651 MGI:73245 NCBI chr 6:45,683,242...45,694,824
Ensembl chr 6:45,683,234...45,694,822
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:143,171,457...143,278,485
Ensembl chr 1:143,171,264...143,278,485
JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:4421084 NCBI chr13:113,890,274...113,927,824
Ensembl chr13:113,890,272...113,927,877
JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070
JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:86,616,785...86,619,160
Ensembl chr10:86,616,785...86,619,157
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) RGD PMID:17911113 MGI:5319608 NCBI chr 1:175,839,140...175,869,167
Ensembl chr 1:175,839,108...175,869,165
JBrowse link
G Ctsg cathepsin G involved_in ISO
IEA
(PMID:1937776)
GO_REF:0000107
RGD
Ensembl
PMID:1937776 GO_REF:0000107 NCBI chr15:35,107,333...35,113,678
Ensembl chr15:35,111,091...35,113,678
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEP
ISO
UniProtKB:P05067 (MGI:6162390|PMID:23499256) RGD PMID:23499256, PMID:10422773 MGI:6162390, RGD:4892028 NCBI chr 8:128,740,756...128,754,514
Ensembl chr 8:128,740,756...128,754,514
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,743,678...18,745,457
Ensembl chr14:18,743,685...18,745,457
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO
IBA
(PMID:23776175)
PMID:21873635
RGD PMID:23776175, PMID:21873635 RGD:13792537 NCBI chr14:17,210,733...17,212,930
Ensembl chr14:17,210,733...17,212,930
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,195,395...17,198,170
Ensembl chr14:17,195,014...17,198,291
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,253,146...15,258,221
Ensembl chr14:15,253,125...15,258,207
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) RGD PMID:11017100 MGI:1891794 NCBI chr10:57,060,005...57,064,600
Ensembl chr10:57,060,007...57,064,600
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:16239643, PMID:21873635 RGD:5135237, RGD:13792537 NCBI chr14:18,731,346...18,733,391
Ensembl chr14:18,731,378...18,733,391
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:10738946, PMID:21873635 RGD:5135239, RGD:13792537 NCBI chr14:18,820,168...18,839,659
Ensembl chr14:18,820,168...18,839,595
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IEP
IBA
ISO
IEA
PMID:21873635
(PMID:8399143)
GO_REF:0000107
RGD
Ensembl
PMID:8399143, PMID:15778492, PMID:21873635 GO_REF:0000107, RGD:5135262, RGD:13792537 NCBI chr14:18,860,201...18,920,839
Ensembl chr14:18,860,264...18,862,407
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,228,832...17,233,743
Ensembl chr14:17,228,856...17,234,712
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:62,798,317...62,809,848
Ensembl chr 8:62,779,875...62,809,893
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:266,422,127...266,429,947
Ensembl chr 1:266,422,132...266,428,239
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4453088|PMID:19948740)
GO_REF:0000107
(PMID:19948740)
UniProt
RGD
Ensembl
PMID:19948740 GO_REF:0000024 GO_REF:0000107 MGI:4453088 NCBI chr 3:14,889,263...15,060,286
Ensembl chr 3:14,889,510...15,060,286
JBrowse link
G Defa10 defensin alpha 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:94880|MGI:94882|MGI:99582 (MGI:3698376|PMID:11248802)
RGD PMID:11248802, PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:75,498,236...75,499,012
Ensembl chr16:75,498,236...75,499,012
JBrowse link
G Defa11 defensin alpha 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,517,421...75,519,605
Ensembl chr16:75,517,505...75,518,336
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,345,086...75,346,122
Ensembl chr16:75,345,086...75,346,122
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,338,050...75,340,401
Ensembl chr16:75,338,052...75,340,360
JBrowse link
G Defa6 defensin alpha 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:94880|MGI:94882|MGI:94883 (MGI:3698376|PMID:11248802)
RGD PMID:11248802, PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:75,400,781...75,401,655
Ensembl chr16:75,400,781...75,401,655
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,428,675...75,429,568
Ensembl chr16:75,428,675...75,429,568
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,465,710...75,466,604
Ensembl chr16:75,465,710...75,466,606
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,366,925...75,367,985
Ensembl chr16:75,366,929...75,367,906
JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:88,004,775...88,036,354
Ensembl chr15:88,006,977...88,036,354
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 1:259,692,020...259,818,922
Ensembl chr 1:259,739,955...259,819,494
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 3:2,617,795...2,623,818
Ensembl chr 3:2,617,805...2,623,445
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:10,306,508...10,385,239
Ensembl chr 6:10,306,405...10,387,265
JBrowse link
G Fcar Fc fragment of IgA receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:73,230,392...73,263,462
Ensembl chr 1:73,230,390...73,264,302
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:89,385,775...89,396,047
Ensembl chr13:89,385,859...89,396,051
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:257,425,676...257,452,745
Ensembl chr 2:257,425,679...257,449,568
JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:15,273,937...15,281,759
Ensembl chr  X:15,378,789...15,382,066
Ensembl chr  X:15,378,789...15,382,066
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4412460|PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:14,059,347...14,061,703
Ensembl chr10:14,059,347...14,061,703
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
ISO (PMID:20547752) RGD PMID:20547752 NCBI chr14:3,058,035...3,073,332
Ensembl chr14:3,058,993...3,068,371
JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:113,065,953...113,071,265
Ensembl chr 2:113,066,885...113,070,261
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6478067|PMID:32460388)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:32460388 GO_REF:0000024 GO_REF:0000107 MGI:6478067 NCBI chr10:62,656,000...62,664,467
Ensembl chr10:62,656,000...62,664,466
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,705,917...9,721,921
Ensembl chr17:9,703,453...9,721,574
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009411|PMID:16023107)
BHF-UCL
RGD
PMID:16023107 GO_REF:0000024 MGI:5009411 NCBI chr 1:219,291,679...219,294,147
Ensembl chr 1:219,291,679...219,294,147
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:89,368,021...89,369,960
Ensembl chr 1:89,368,021...89,369,960
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) RGD PMID:25337993 MGI:5705210 NCBI chr10:31,561,838...31,590,624
Ensembl chr10:31,561,895...31,588,943
JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:90,140,183...90,169,853
Ensembl chr10:90,140,183...90,151,042
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:96,810,868...96,856,303
Ensembl chr 6:96,810,907...96,856,052
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) RGD PMID:28096568 MGI:6244743 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237
JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:36,077,615...36,080,191
Ensembl chr16:36,077,617...36,080,191
Ensembl chr11:36,077,617...36,080,191
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:200,452,623...200,480,785
Ensembl chr 2:200,452,624...200,479,423
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:18,516,253...18,554,536
Ensembl chr 7:18,516,512...18,554,227
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:117,538,523...117,565,478
Ensembl chr 7:117,538,523...117,565,478
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) RGD PMID:18791161 MGI:3821815 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419
JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within
ISO (PMID:23071313)
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717)
RGD PMID:19047410 PMID:21609717 PMID:23071313 MGI:3828894 MGI:5013871 NCBI chr13:47,738,933...47,743,392
Ensembl chr13:47,739,526...47,743,392
JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) RGD PMID:19047410 MGI:3828894 NCBI chr 2:165,076,945...165,083,996
Ensembl chr 2:165,076,607...165,084,318
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) RGD PMID:18025219 PMID:21606371 MGI:4412460 MGI:5013875 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:11739527 RGD:729357 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il1a interleukin 1 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:121,824,712...121,836,122
Ensembl chr 3:121,825,412...121,836,086
JBrowse link
G Il1b interleukin 1 beta involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:23200736, PMID:21873635 RGD:7175528, RGD:13792537 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,408,560...1,416,601
Ensembl chr 3:1,413,671...1,416,599
JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:47,618,451...47,623,849
Ensembl chr13:47,618,452...47,623,849
JBrowse link
G Il36a interleukin 36, alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,330,790...1,335,811
Ensembl chr 3:1,331,226...1,335,775
JBrowse link
G Il36b interleukin 36, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,366,123...1,464,851
Ensembl chr 3:1,366,119...1,371,626
JBrowse link
G Il36g interleukin 36, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,285,658...1,291,836
Ensembl chr 3:1,285,664...1,291,865
JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:1,385,256...1,392,275
Ensembl chr 3:1,385,654...1,392,275
JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within
involved_in
IEP
ISO
(MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142)
(PMID:23776175)
RGD PMID:19047410 PMID:21606371 PMID:23610142 PMID:23776175, PMID:2789217 MGI:3828894 MGI:5013875 MGI:5543352, RGD:11049548 NCBI chr 4:3,043,231...3,047,807
Ensembl chr 4:3,043,231...3,047,807
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15793310, PMID:21873635 RGD:1579809, RGD:13792537 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO MGI:1926332 (MGI:3653161|PMID:9348310) RGD PMID:9348310 MGI:3653161 NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928
JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:114,011,184...114,014,277
Ensembl chr 5:114,011,189...114,014,277
JBrowse link
G Klrk1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3028810|PMID:14764662)
Ensembl
RGD
PMID:14764662 GO_REF:0000107 MGI:3028810 NCBI chr 4:163,392,652...163,403,735
Ensembl chr 4:163,393,217...163,403,653
JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:93,684,324...93,715,378
Ensembl chr13:93,684,437...93,716,227
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
ISS
(PMID:12594207), (PMID:24120359)
(MGI:5645195|PMID:24380872)
GO_REF:0000024
RGD
UniProt
PMID:12594207 PMID:24120359 PMID:24380872 GO_REF:0000024 MGI:5645195 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:11,414,189...11,417,534
Ensembl chr 3:11,414,186...11,417,546
JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling involved_in ISO
IEA
(PMID:27812135)
GO_REF:0000107
RGD
Ensembl
PMID:27812135 GO_REF:0000107 NCBI chr  X:144,699,737...144,778,947
Ensembl chr  X:144,807,392...144,807,829
JBrowse link
G Lilrb2 leukocyte immunoglobulin like receptor B2 involved_in ISO (PMID:14971032) RGD PMID:14971032 NCBI chr 1:63,734,135...63,741,986
Ensembl chr 1:63,734,135...63,741,982
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:3687962 (MGI:3687609|PMID:16954198) RGD PMID:16954198 MGI:3687609 NCBI chr10:4,753,546...4,763,272
Ensembl chr10:4,719,713...4,763,510
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:35,736,486...35,743,088
Ensembl chr10:35,737,664...35,739,625
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:5645195 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) RGD PMID:16831874 NCBI chr18:61,108,712...61,162,446
Ensembl chr18:61,109,069...61,162,445
JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:45,089,455...45,110,802
Ensembl chr10:47,182,433...47,203,753
Ensembl chr10:47,182,433...47,203,753
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in ISO (MGI:1101248|PMID:9405446) RGD PMID:9405446 MGI:1101248 NCBI chr12:2,546,278...2,555,310
Ensembl chr12:2,548,218...2,555,164
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO (PMID:23776175) RGD PMID:23776175 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:23776175)
Ensembl
RGD
PMID:23776175 GO_REF:0000107 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:35,333,859...35,374,364
Ensembl chr10:35,333,859...35,374,355
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3829850|PMID:18955699)
UniProt
RGD
PMID:18955699 GO_REF:0000024 MGI:3829850 NCBI chr 2:11,658,534...11,822,788
Ensembl chr 2:11,658,568...11,822,787
JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:253,128,250...253,128,336
Ensembl chr 1:253,128,250...253,128,336
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:84,165,950...84,166,059
Ensembl chr10:84,165,950...84,166,059
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:59,704,827...59,704,911
Ensembl chr 1:59,704,827...59,704,911
JBrowse link
G Mir139 microRNA 139 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:166,589,545...166,589,612
Ensembl chr 1:166,589,545...166,589,612
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:39,608,951...39,609,049
Ensembl chr19:39,608,951...39,609,049
JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5013506|PMID:21536037) RGD PMID:21536037 MGI:5013506 NCBI chr10:75,050,839...75,050,925
Ensembl chr10:75,050,832...75,050,942
JBrowse link
G Mir146a microRNA 146a acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879) RGD PMID:18791161 PMID:21247879 MGI:3821815 MGI:5050043 NCBI chr10:28,962,476...28,962,570
Ensembl chr10:28,962,476...28,962,570
JBrowse link
G Mir146b microRNA 146b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:266,089,488...266,089,575
Ensembl chr 1:266,089,488...266,089,575
JBrowse link
G Mir147 microRNA 147 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 3:114,775,343...114,775,421
Ensembl chr 3:114,775,343...114,775,421
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 1:101,115,974...101,116,058
Ensembl chr 1:101,115,974...101,116,058
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr11:24,176,603...24,176,667
Ensembl chr11:24,176,603...24,176,667
JBrowse link
G Mir16 microRNA 16 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 2:165,606,072...165,606,166
Ensembl chr 2:165,606,072...165,606,166
JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:23,150,352...23,150,468
Ensembl chr 3:23,150,352...23,150,468
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:23,151,455...23,151,542
Ensembl chr 3:23,151,455...23,151,542
JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr19:25,290,211...25,290,316
Ensembl chr19:25,290,211...25,290,316
JBrowse link
G Mir184 microRNA 184 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 8:97,175,657...97,175,733
Ensembl chr 8:97,175,657...97,175,733
JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr10:67,065,885...67,065,996
Ensembl chr10:67,065,885...67,065,996
JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:103,250,576...103,250,658
Ensembl chr13:103,250,576...103,250,658
JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:221,634,786...221,634,870
Ensembl chr 1:221,634,786...221,634,870
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:2676863 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr13:80,125,487...80,125,596
Ensembl chr13:80,125,487...80,125,596
JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 4:157,236,786...157,236,854 JBrowse link
G Mir202 microRNA 202 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:212,295,630...212,295,701
Ensembl chr 1:212,295,630...212,295,701
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:112,233,283...112,233,390
Ensembl chr13:112,233,283...112,233,390
JBrowse link
G Mir21 microRNA 21 IEP RGD PMID:30542412 RGD:41410885 NCBI chr10:73,902,210...73,902,301
Ensembl chr10:73,902,210...73,902,301
JBrowse link
G Mir210 microRNA 210 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:214,208,355...214,208,464 JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr14:113,119,529...113,119,633
Ensembl chr14:113,119,529...113,119,633
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within IEP
ISO
(MGI:3817382|PMID:18762567), (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:18791161 PMID:21247879, PMID:29707878 MGI:3817382 MGI:3821815 MGI:5050043, RGD:25823197 NCBI chr  X:65,367,812...65,367,921
Ensembl chr  X:65,367,812...65,367,921
JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr  X:152,223,754...152,223,835
Ensembl chr  X:152,223,754...152,223,835
JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr17:823,222...823,318
Ensembl chr17:823,222...823,318
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:25,318,863...25,318,970
Ensembl chr19:25,318,863...25,318,970
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:127,714,441...127,714,530
Ensembl chr 8:127,714,441...127,714,530
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:81,675,275...81,675,359
Ensembl chr 9:81,675,275...81,675,359
JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:25,318,736...25,318,822
Ensembl chr19:25,318,736...25,318,822
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:58,343,931...58,344,018 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:58,344,310...58,344,390
Ensembl chr 4:58,344,310...58,344,390
JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:113,782,057...113,782,137
Ensembl chr13:113,782,057...113,782,140
JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:109,282,662...109,282,747
Ensembl chr 7:109,282,658...109,282,752
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 5:139,699,877...139,699,965
Ensembl chr 5:139,699,877...139,699,965
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:29,562,376...29,562,459
Ensembl chr 9:29,562,376...29,562,459
JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:109,286,463...109,286,544
Ensembl chr 7:109,286,463...109,286,544
JBrowse link
G Mir323 microRNA 323 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,861,199...133,861,284
Ensembl chr 6:133,861,199...133,861,284
JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 6:132,561,169...132,561,267
Ensembl chr 6:132,561,169...132,561,267
JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:132,748,968...132,749,063
Ensembl chr 6:132,748,968...132,749,063
JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,876,615...133,876,675
Ensembl chr 6:133,876,586...133,876,693
JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr16:57,519,675...57,519,748
Ensembl chr16:57,519,675...57,519,748
JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,893,419...133,893,495 JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:117,354,821...117,354,903
Ensembl chr 8:117,354,821...117,354,903
JBrowse link
G Mir431 microRNA 431 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,711,425...133,711,538
Ensembl chr 6:133,711,425...133,711,538
JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,712,334...133,712,426
Ensembl chr 6:133,712,334...133,712,426
JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:27,845...27,921
Ensembl chr10:27,845...27,921
JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 Ensembl chr16:73,680,363...73,680,490 JBrowse link
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:133,864,370...133,864,452
Ensembl chr 6:133,864,369...133,864,453
JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr  X:16,121,332...16,121,411
Ensembl chr  X:16,121,322...16,121,413
JBrowse link
G Mir598 microRNA 598 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr15:47,057,496...47,057,574
Ensembl chr15:47,057,496...47,057,575
JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO MGI:3619437 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr17:6,675,016...6,675,112
Ensembl chr17:6,675,016...6,675,112
JBrowse link
G Mir7b microRNA 7b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 9:10,812,432...10,812,541
Ensembl chr 9:10,812,432...10,812,541
JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (MGI:5013871|PMID:21609717) RGD PMID:21609717 MGI:5013871 NCBI chr  X:21,583,875...21,583,982
Ensembl chr  X:21,583,875...21,583,982
JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:114,874,457...114,874,544
Ensembl chr 8:114,874,454...114,874,550
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:5486412 NCBI chr17:81,352,700...81,433,743
Ensembl chr17:81,352,700...81,433,743
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) RGD PMID:17660297 MGI:6355543 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:93,369,119...93,377,643
Ensembl chr 9:93,368,932...93,377,643
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in IDA
IEA
ISO
GO_REF:0000107
(PMID:23776175)
Ensembl
RGD
PMID:23776175, PMID:16842873 GO_REF:0000107, RGD:10045666 NCBI chr 2:240,773,520...240,890,053
Ensembl chr 2:240,773,456...240,866,689
JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:4437182|PMID:20060382)
GO_REF:0000107
RGD
Ensembl
PMID:20060382, PMID:21873635 GO_REF:0000107 MGI:4437182, RGD:13792537 NCBI chr 1:86,941,073...86,948,845
Ensembl chr 1:86,941,074...86,948,845
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO
ISS
(PMID:20829348)
GO_REF:0000024
RGD
UniProt
PMID:20829348 GO_REF:0000024 NCBI chr20:4,823,590...4,839,202
Ensembl chr20:4,822,935...4,839,202
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:12483741), (PMID:28847925)
(MGI:6095076|PMID:28847925)
RGD PMID:12483741 PMID:28847925 MGI:6095076 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
(MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219 PMID:18791161, PMID:21975807 GO_REF:0000107 MGI:3821815 MGI:4412460, RGD:5508737 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190
JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,478,548...75,481,146
Ensembl chr16:75,414,786...75,481,115
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18511497)
Ensembl
RGD
PMID:18511497 GO_REF:0000107 NCBI chr10:86,683,875...86,690,815
Ensembl chr10:86,683,875...86,690,815
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA
(PMID:18511497)
(MGI:5009771|PMID:21187453)
GO_REF:0000107
RGD
Ensembl
PMID:18511497 PMID:21187453 GO_REF:0000107 MGI:5009771 NCBI chr 3:80,004,130...80,014,197
Ensembl chr 3:80,004,130...80,012,750
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO
GO_REF:0000107
(MGI:5707586|PMID:18972444)
Ensembl
RGD
PMID:18972444 GO_REF:0000107 MGI:5707586 NCBI chr 7:30,003,429...30,162,095
Ensembl chr 7:30,003,429...30,162,056
JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:49,011,951...49,055,246
Ensembl chr15:49,010,492...49,055,237
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:71,540,870...71,585,906
Ensembl chr  X:71,528,988...71,585,908
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:13,742,655...13,760,460
Ensembl chr 5:13,744,658...13,760,305
JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:166,031,228...166,045,423
Ensembl chr 1:166,031,272...166,037,424
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) RGD PMID:22844456 MGI:5795816 NCBI chr15:33,555,640...33,560,251
Ensembl chr15:33,555,640...33,560,242
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO
GO_REF:0000024
(MGI:5319608|PMID:17911113)
UniProt
RGD
PMID:17911113 GO_REF:0000024 MGI:5319608 NCBI chr 1:85,362,421...85,367,999
Ensembl chr 1:85,362,268...85,368,031
JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:167,982,438...168,004,724
Ensembl chr 5:167,982,439...168,004,724
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:247,562,202...247,629,279
Ensembl chr 1:247,562,202...247,627,193
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) RGD PMID:19946272 MGI:4438829 NCBI chr 1:274,616,625...274,648,204
Ensembl chr 1:274,625,224...274,648,204
JBrowse link
G Pde2a phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:166,534,643...166,626,158
Ensembl chr 1:166,534,643...166,626,158
JBrowse link
G Pde4b phosphodiesterase 4B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181444 (MGI:3521611|PMID:15585880)
Ensembl
RGD
PMID:15585880 GO_REF:0000107 MGI:3521611 NCBI chr 5:121,759,236...122,136,814
Ensembl chr 5:121,952,977...122,136,814
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:3525068 (MGI:3521611|PMID:15585880) RGD PMID:15585880 MGI:3521611 NCBI chr 2:40,219,999...41,468,551
Ensembl chr 2:40,554,146...41,464,264
JBrowse link
G Pf4 platelet factor 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,848,549...18,849,258
Ensembl chr14:18,848,549...18,849,258
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISO
ISS
(PMID:28007986)
GO_REF:0000024
RGD
UniProt
PMID:28007986 GO_REF:0000024 NCBI chr 5:113,548,913...113,578,928
Ensembl chr 5:113,548,913...113,578,928
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,644,296...3,650,765
Ensembl chr15:3,644,769...3,650,819
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17590392)
Ensembl
RGD
PMID:17590392 GO_REF:0000107 NCBI chr 8:99,625,523...99,645,882
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Plscr2 phospholipid scramblase 2 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:99,650,351...99,725,514
Ensembl chr 8:99,625,545...99,725,217
JBrowse link
G Plscr3 phospholipid scramblase 3 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:56,452,632...56,458,390
Ensembl chr10:56,453,877...56,458,390
JBrowse link
G Plscr4 phospholipid scramblase 4 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:99,880,073...99,917,733
Ensembl chr 8:99,880,073...99,918,825
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:7,818,289...7,883,482
Ensembl chr20:7,818,289...7,885,333
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:63,095,291...63,190,688
Ensembl chr14:63,095,720...63,187,009
JBrowse link
G Ppbp pro-platelet basic protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:18,852,433...18,853,237
Ensembl chr14:18,851,954...18,853,315
JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:63,635,239...63,658,360
Ensembl chr10:63,635,219...63,658,361
JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:263,895,093...263,979,682
Ensembl chr 2:263,895,241...263,979,698
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:12486103) RGD PMID:12486103 NCBI chr 1:199,438,029...199,439,062
Ensembl chr 1:199,437,832...199,439,210
JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr10:86,838,819...86,884,224
Ensembl chr10:86,860,685...86,884,210
JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:75,528,348...75,530,511
Ensembl chr16:75,497,832...75,530,517
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in
IEP
ISO
IDA
(PMID:20547752)
(PMID:25762865)
RGD PMID:20547752 PMID:25762865, PMID:9918814, PMID:15728586 RGD:2298880, RGD:1580656 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2446070|MGI:2660793 (MGI:2176422|PMID:11894098), (MGI:2176424|PMID:11894097) RGD PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) RGD PMID:25903009 MGI:5660440 NCBI chr 7:12,471,805...12,515,700
Ensembl chr 7:12,471,824...12,518,654
JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:18675776) RGD PMID:18675776 NCBI chr 1:126,979,579...126,989,344
Ensembl chr 1:126,979,575...126,989,344
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEP
ISO
IEA
(PMID:19916862)
GO_REF:0000107
RGD
Ensembl
PMID:19916862, PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:22,641,104...22,651,482
Ensembl chr12:22,641,104...22,651,482
JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:250,692,448...250,951,685
Ensembl chr 1:250,691,370...250,951,697
JBrowse link
G Shpk sedoheptulokinase involved_in ISO
IBA
(PMID:22682222)
(MGI:5428058|PMID:22682222)
PMID:21873635
RGD PMID:22682222, PMID:21873635 MGI:5428058, RGD:13792537 NCBI chr10:59,765,328...59,789,676
Ensembl chr10:59,765,258...59,789,678
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3760575|PMID:17954568)
Ensembl
RGD
PMID:17954568 GO_REF:0000107 MGI:3760575 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477
JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B involved_in IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:21,490,216...21,709,077
Ensembl chr14:21,490,217...21,709,084
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:82,815,158...82,824,529
Ensembl chr14:82,818,663...82,824,599
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:3831067 NCBI chr14:23,575,400...23,604,984
Ensembl chr14:23,576,085...23,604,834
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO MGI:1861949 (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:11,253,153...11,259,233
Ensembl chr 7:11,253,180...11,257,977
JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:71,852,738...71,902,127
Ensembl chr 3:71,852,744...71,893,618
JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693 NCBI chr11:82,845,676...82,853,439
Ensembl chr11:83,868,655...83,873,910
Ensembl chr11:83,868,655...83,873,910
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:3718934 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)
RGD PMID:19412184 PMID:22685567 NCBI chr18:40,555,106...40,572,569
Ensembl chr18:40,555,106...40,572,241
JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within
involved_in
IEP
ISO
MGI:1860755 (MGI:1860539|PMID:10880523), (MGI:2686801|PMID:14691481), (MGI:5604854|PMID:24740015)
(MGI:4421230|PMID:20051628), (MGI:6244743|PMID:28096568)
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)
RGD PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:24740015 PMID:28096568 PMID:30321456, PMID:20438866 MGI:1860539 MGI:2686801 MGI:4421230 MGI:5604854 MGI:6244743, RGD:7777075 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:101,364,784...101,385,764
Ensembl chr13:101,381,510...101,385,764
JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757, PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:114,916,122...114,920,171
Ensembl chr 8:114,916,122...114,920,171
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IEP
ISO
IMP
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142) RGD PMID:19047410 PMID:20060382 PMID:21606371 PMID:23610142, PMID:15602748, PMID:10959811, PMID:17964727 MGI:3828894 MGI:4437182 MGI:5013875 MGI:5543352, RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) RGD PMID:19912257 PMID:21127049 PMID:21220427 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:163,136,390...163,167,299
Ensembl chr 5:163,136,390...163,167,299
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:79,269,973...79,293,775
Ensembl chr13:79,269,973...79,293,778
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) RGD PMID:16633345 MGI:3656197 NCBI chr14:81,487,934...81,505,889
Ensembl chr14:81,488,008...81,504,686
JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) RGD PMID:17088249 NCBI chr 4:96,386,207...96,490,517
Ensembl chr 4:96,449,351...96,492,871
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
G Trim41 tripartite motif-containing 41 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:34,155,515...34,166,599
Ensembl chr10:34,155,515...34,166,599
JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:124,460,358...124,470,610
Ensembl chr 7:124,460,358...124,470,609
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:26255671) RGD PMID:26255671 NCBI chr16:20,824,888...20,845,632
Ensembl chr16:20,824,864...20,845,243
JBrowse link
G Vim vimentin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27812135)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27812135 GO_REF:0000024 GO_REF:0000107 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:245,236,819...245,273,688
Ensembl chr 1:245,237,736...245,269,205
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
G Wnt5a Wnt family member 5A involved_in IEA
ISO
GO_REF:0000107
(PMID:18174455)
Ensembl
RGD
PMID:18174455 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5605956|PMID:12612580)
GO_REF:0000107
(PMID:11460154)
UniProt
RGD
Ensembl
PMID:11460154 PMID:12612580 GO_REF:0000024 GO_REF:0000107 MGI:5605956 NCBI chr14:85,753,736...85,758,820
Ensembl chr14:85,753,760...85,758,145
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
ISS
(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
GO_REF:0000024
RGD
UniProt
PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 PMID:25861989 PMID:26000482 PMID:26255671 GO_REF:0000024 MGI:3842851 MGI:5142149 MGI:5706859 MGI:5751631 NCBI chr 5:143,111,342...143,120,131
Ensembl chr 5:143,111,074...143,120,165
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499), (MGI:5795816|PMID:22844456)
GO_REF:0000024
(PMID:14679154), (PMID:14766228), (PMID:15187101)
Ensembl
RGD
UniProt
PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 PMID:15187101 PMID:22844456 GO_REF:0000024 GO_REF:0000107 MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chr 1:85,380,088...85,382,565
Ensembl chr 1:85,380,088...85,382,569
JBrowse link
G Zfp709 zinc finger protein 709 involved_in IDA PMID:17374454 UniProt PMID:17374454 RGD:8553966 NCBI chr16:19,632,954...19,643,956
Ensembl chr16:19,634,134...19,643,236
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:88,918,359...88,921,017
Ensembl chr 9:88,918,433...88,921,001
JBrowse link
G Cd14 CD14 molecule involved_in ISO (PMID:12594207) RGD PMID:12594207 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:2447190|MGI:3573941 (MGI:3528769|PMID:15690042), (MGI:3587138|PMID:16061696) RGD PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:46,196,771...46,201,271
Ensembl chr15:46,196,771...46,201,271
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
IEA
(PMID:12594207)
GO_REF:0000107
RGD
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO
GO_REF:0000107
(PMID:26649771)
Ensembl
RGD
PMID:26649771 GO_REF:0000107 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:36,382,029...36,399,625
Ensembl chr 8:36,385,353...36,388,224
JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:12594207), (PMID:26649771)
MGI:2674036 (MGI:3528769|PMID:15690042)
RGD PMID:12594207 PMID:15690042 PMID:26649771 MGI:3528769 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1860885 (MGI:2178646|PMID:10549626)
Ensembl
RGD
PMID:10549626 GO_REF:0000107 MGI:2178646 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Cd14 CD14 molecule involved_in ISO (PMID:15039339) RGD PMID:15039339 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (PMID:31285585)
(MGI:6383257|PMID:31285585)
RGD PMID:31285585 MGI:6383257 NCBI chr 7:104,514,566...104,641,875
Ensembl chr 7:104,516,391...104,556,419
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO MGI:1857166 (MGI:3608295|PMID:12385742) RGD PMID:12385742 MGI:3608295 NCBI chr13:89,329,298...89,343,916
Ensembl chr13:89,327,794...89,433,815
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA
(PMID:16601243)
GO_REF:0000107
RGD
Ensembl
PMID:16601243 GO_REF:0000107 NCBI chr 9:71,443,784...71,445,541
Ensembl chr 9:71,443,588...71,445,739
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:19853610 RGD:2325979 NCBI chr 8:53,836,797...54,134,881
Ensembl chr 8:53,839,098...53,901,358
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:23908241)
UniProt
Ensembl
RGD
PMID:23908241 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:86,948,866...86,971,954
Ensembl chr 1:86,948,918...86,971,952
JBrowse link
G Tnf tumor necrosis factor IEP streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (MGI:4835148|PMID:16601243) RGD PMID:16601243 MGI:4835148 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860
JBrowse link
cellular response to molecule of fungal origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btk Bruton tyrosine kinase IDA RGD PMID:10744701 RGD:1600536 NCBI chr  X:105,360,922...105,390,580
Ensembl chr  X:105,360,922...105,390,580
JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO
IBA
(PMID:22267217)
PMID:21873635
RGD PMID:22267217, PMID:21873635 RGD:13792537 NCBI chr 4:163,216,152...163,227,367
Ensembl chr 4:163,216,163...163,227,334
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5803730|PMID:27288407) RGD PMID:27288407 MGI:5803730 NCBI chr10:57,415,429...57,436,412
Ensembl chr10:57,415,832...57,436,368
JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:3576850|PMID:15845454)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:15845454 GO_REF:0000024 GO_REF:0000107 MGI:3576850 NCBI chr17:12,614,311...12,669,568
Ensembl chr17:12,614,311...12,669,573
JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:117,930,557...117,932,371
Ensembl chr 8:117,930,546...117,932,518
JBrowse link
G Defb25 defensin beta 25 involved_in IBA
ISO
PMID:21873635
(PMID:24955228)
RGD PMID:24955228, PMID:21873635 RGD:13792537 NCBI chr 3:148,103,643...148,104,483
Ensembl chr 3:148,103,643...148,104,483
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (MGI:5790524|PMID:27374331) RGD PMID:27374331 MGI:5790524 NCBI chr10:45,884,324...45,918,290
Ensembl chr10:45,893,018...45,918,254
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IEP
ISO
MGI:2680581 (MGI:3686795|PMID:16949315) RGD PMID:16949315, PMID:24169446 MGI:3686795, RGD:13204728 NCBI chr19:19,342,061...19,389,366
Ensembl chr19:19,332,594...19,377,492
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 1:220,992,770...221,003,249
Ensembl chr 1:220,992,770...221,003,249
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (MGI:3686795|PMID:16949315) RGD PMID:16949315 MGI:3686795 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:14,611,541...14,618,076
Ensembl chr 9:14,611,561...14,618,013
JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO
ISS
(PMID:16880211)
GO_REF:0000024
RGD
UniProt
PMID:16880211 GO_REF:0000024 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Tlr1 toll-like receptor 1 involved_in ISO
IBA
(PMID:16880211), (PMID:19931471)
PMID:21873635
RGD PMID:16880211 PMID:19931471, PMID:21873635 RGD:13792537 NCBI chr14:45,062,662...45,065,014
Ensembl chr14:45,062,662...45,081,991
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO (PMID:16880211), (PMID:19931471) RGD PMID:16880211 PMID:19931471 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061
JBrowse link
cellular response to tumor cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igfbpl1 insulin-like growth factor binding protein-like 1 involved_in ISO (PMID:15845387) RGD PMID:15845387 NCBI chr 5:61,395,407...61,410,812
Ensembl chr 5:61,395,408...61,410,812
JBrowse link
G Txnip thioredoxin interacting protein involved_in ISS
ISO
GO_REF:0000024
(PMID:18541147)
UniProt
RGD
PMID:18541147 GO_REF:0000024 NCBI chr 2:198,683,168...198,686,971
Ensembl chr 2:198,683,159...198,686,974
JBrowse link
ER overload response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atg10 autophagy related 10 involved_in ISO (PMID:17256008) RGD PMID:17256008 NCBI chr 2:19,853,546...20,152,918
Ensembl chr 2:19,853,546...20,152,884
JBrowse link
G Ccdc47 coiled-coil domain containing 47 acts_upstream_of_or_within ISO (MGI:3721716|PMID:17204322) RGD PMID:17204322 MGI:3721716 NCBI chr10:94,388,425...94,406,949
Ensembl chr10:94,388,430...94,406,949
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 acts_upstream_of_or_within
involved_in
IMP
ISO
IEA
IBA
MGI:2179046 (MGI:2158984|PMID:11854325)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:11854325, PMID:11158311, PMID:21873635 GO_REF:0000107 MGI:2158984, RGD:70575, RGD:13792537 NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084
JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO
ISS
(PMID:10677345), (PMID:11907036)
GO_REF:0000024
RGD
UniProt
PMID:10677345 PMID:11907036 GO_REF:0000024 NCBI chr 4:98,648,513...98,709,695
Ensembl chr 4:98,648,545...98,709,694
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in
acts_upstream_of_or_within
ISO (PMID:14744935)
(MGI:3032464|PMID:14744935)
RGD PMID:14744935 MGI:3032464 NCBI chr11:65,060,884...65,208,842
Ensembl chr11:65,066,235...65,209,268
JBrowse link
G Hspa5 heat shock protein family A (Hsp70) member 5 acts_upstream_of_or_within ISO (MGI:2158984|PMID:11854325) RGD PMID:11854325 MGI:2158984 NCBI chr 3:13,838,304...13,842,763
Ensembl chr 3:13,838,304...13,842,762
JBrowse link
G Ins2 insulin 2 acts_upstream_of_or_within ISO MGI:1857572 (MGI:2158984|PMID:11854325) RGD PMID:11854325 MGI:2158984 NCBI chr 1:215,856,967...215,858,034
Ensembl chr 1:215,856,971...215,858,034
JBrowse link
G Ppp1r15b protein phosphatase 1, regulatory subunit 15B acts_upstream_of_or_within ISO (MGI:2681361|PMID:14638860) RGD PMID:14638860 MGI:2681361 NCBI chr13:49,933,155...49,940,961
Ensembl chr13:49,933,155...49,940,961
JBrowse link
G Selenos selenoprotein S involved_in ISO (PMID:16574427), (PMID:17210132) RGD PMID:16574427 PMID:17210132 NCBI chr 1:126,979,579...126,989,344
Ensembl chr 1:126,979,575...126,989,344
JBrowse link
G Tmco1 transmembrane and coiled-coil domains 1 involved_in ISO
ISS
(PMID:27212239)
GO_REF:0000024
RGD
UniProt
PMID:27212239 GO_REF:0000024 NCBI chr13:85,465,015...85,559,113
Ensembl chr13:85,465,792...85,559,087
JBrowse link
G Tp53 tumor protein p53 involved_in ISO (PMID:14744935) RGD PMID:14744935 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449
JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO (MGI:5604854|PMID:24740015) RGD PMID:24740015 MGI:5604854 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISO
ISS
(PMID:16831874)
GO_REF:0000024
RGD
UniProt
PMID:16831874 GO_REF:0000024 NCBI chr 2:251,805,392...251,814,957
Ensembl chr 2:251,805,392...251,814,957
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:154,741,627...154,768,584
Ensembl chr 3:154,741,631...154,768,640
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:21147091)
UniProt
RGD
PMID:21147091 GO_REF:0000024 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Cd14 CD14 molecule involved_in IBA
ISO
ISS
PMID:21873635
(MGI:5645195|PMID:24380872)
GO_REF:0000024
RGD
UniProt
PMID:24380872, PMID:21873635 GO_REF:0000024 MGI:5645195, RGD:13792537 NCBI chr18:29,560,341...29,562,290
Ensembl chr18:29,560,365...29,562,153
JBrowse link
G Cd6 Cd6 molecule involved_in ISO (PMID:17601777) RGD PMID:17601777 NCBI chr 1:226,848,399...226,887,259
Ensembl chr 1:226,848,403...226,887,156
JBrowse link
G Il18 interleukin 18 involved_in IEA
ISO
GO_REF:0000107
(PMID:21147091)
Ensembl
RGD
PMID:21147091 GO_REF:0000107 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299
JBrowse link
G Il1b interleukin 1 beta involved_in IEA
ISO
GO_REF:0000107
(PMID:21147091)
Ensembl
RGD
PMID:21147091 GO_REF:0000107 NCBI chr 3:121,876,256...121,882,637
Ensembl chr 3:121,876,263...121,882,726
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:10383454)
(MGI:2178646|PMID:10549626), (MGI:2669022|PMID:12855817)
RGD PMID:10383454 PMID:10549626 PMID:12855817 MGI:2178646 MGI:2669022 NCBI chr  X:156,716,469...156,726,367
Ensembl chr  X:156,716,604...156,725,977
JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 acts_upstream_of_or_within ISO (MGI:3046371|PMID:15082713) RGD PMID:15082713 MGI:3046371 NCBI chr 4:145,594,575...145,651,066
Ensembl chr 4:145,594,575...145,651,053
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) RGD PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chr 1:100,992,244...100,997,202
Ensembl chr 1:100,992,405...100,997,198
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA
IBA
ISO
GO_REF:0000107
PMID:21873635
(PMID:11739189), (PMID:8409400)
Ensembl
RGD
PMID:8409400 PMID:11739189, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:154,786,232...154,812,910
Ensembl chr 3:154,786,215...154,813,464
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:5645195 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISS
ISO
GO_REF:0000024
(MGI:4456928|PMID:20385881)
UniProt
RGD
PMID:20385881 GO_REF:0000024 MGI:4456928 NCBI chr 5:16,526,058...16,642,648
Ensembl chr 5:16,526,058...16,642,648
JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO (MGI:3694380|PMID:16831874) RGD PMID:16831874 MGI:3694380 NCBI chr18:61,108,712...61,162,446
Ensembl chr18:61,109,069...61,162,445
JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:2670551|PMID:12872135)
Ensembl
RGD
PMID:12872135 GO_REF:0000107 MGI:2670551 NCBI chr20:5,933,290...5,995,137
Ensembl chr20:5,933,303...5,995,137
JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mtdh metadherin involved_in ISO (PMID:19740331) RGD PMID:19740331 NCBI chr 7:72,771,018...72,830,599
Ensembl chr 7:72,772,440...72,827,908
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO MGI:2385681 (MGI:2669022|PMID:12855817) RGD PMID:12855817 MGI:2669022 NCBI chr 8:128,022,512...128,027,462
Ensembl chr 8:128,022,473...128,026,841
JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135), (MGI:3775161|PMID:18261938) RGD PMID:12872135 PMID:18261938 MGI:2670551 MGI:3775161 NCBI chr 6:76,267,227...76,270,457
Ensembl chr 6:76,267,228...76,270,457
JBrowse link
G Nos3 nitric oxide synthase 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1857229 (MGI:3576391|PMID:15647265)
Ensembl
RGD
PMID:15647265 GO_REF:0000107 MGI:3576391 NCBI chr 4:7,321,908...7,342,404
Ensembl chr 4:7,320,668...7,342,410
JBrowse link
G Prkce protein kinase C, epsilon involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:3609215 (MGI:3609210|PMID:11696589)
(MGI:3652658|PMID:16757566)
UniProt
RGD
PMID:11696589 PMID:16757566 GO_REF:0000024 MGI:3609210 MGI:3652658 NCBI chr 6:9,483,400...9,973,396
Ensembl chr 6:9,790,422...9,973,396
JBrowse link
G Ptafr platelet-activating factor receptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:150,746,284...150,775,675
Ensembl chr 5:150,754,021...150,775,672
JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:206,342,066...206,390,348
Ensembl chr 2:206,342,066...206,390,348
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,838,713...29,870,390
Ensembl chr 5:29,838,747...29,870,735
JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:36,694,952...36,761,445
Ensembl chr12:36,694,960...36,761,455
JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:30718772)
Ensembl
RGD
PMID:30718772 GO_REF:0000107 NCBI chr 3:79,918,127...79,937,708
Ensembl chr 3:79,918,969...79,938,301
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (MGI:2670551|PMID:12872135) RGD PMID:12872135 MGI:2670551 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533
JBrowse link
G Tgfb1 transforming growth factor, beta 1 involved_in ISO
ISS
(PMID:21147091)
GO_REF:0000024
RGD
UniProt
PMID:21147091 GO_REF:0000024 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 acts_upstream_of_or_within ISO MGI:2679794|MGI:3029019 (MGI:2669022|PMID:12855817), (MGI:2670551|PMID:12872135) RGD PMID:12855817 PMID:12872135 MGI:2669022 MGI:2670551 NCBI chr 9:10,780,185...10,790,280 JBrowse link
G Tlr4 toll-like receptor 4 NOT|involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:10880523)
MGI:1194924|MGI:1321404|MGI:1341909 (MGI:1860539|PMID:10880523)
(MGI:5913054|PMID:28098138)
GO_REF:0000107
UniProtKB:O95711|UniProtKB:Q9Y6Y9 (PMID:10880523)
RGD
Ensembl
PMID:10880523 PMID:28098138 GO_REF:0000107 MGI:1860539 MGI:5913054 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052
JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:21147091) RGD PMID:21147091 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000
Ensembl chr20:5,189,390...5,192,000
JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:11,258,526...11,266,509
Ensembl chr 7:11,261,201...11,266,630
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) RGD PMID:20345905 NCBI chr 8:119,290,416...119,313,261
Ensembl chr 8:119,290,416...119,313,261
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:20829348)
UniProt
RGD
PMID:20829348 GO_REF:0000024 NCBI chr20:4,823,590...4,839,202
Ensembl chr20:4,822,935...4,839,202
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO (PMID:11821383) RGD PMID:11821383 NCBI chr10:57,755,957...57,847,867 JBrowse link
G Prdm1 PR/SET domain 1 acts_upstream_of_or_within ISO (MGI:3826899|PMID:18845144) RGD PMID:18845144 MGI:3826899 NCBI chr20:49,464,921...49,556,623
Ensembl chr20:49,464,919...49,556,518
JBrowse link
G Prdx2 peroxiredoxin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2668456 (MGI:3758374|PMID:17325201)
Ensembl
RGD
PMID:17325201 GO_REF:0000107 MGI:3758374 NCBI chr19:26,084,816...26,090,095
Ensembl chr19:26,084,903...26,090,094
JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO (PMID:17452330) RGD PMID:17452330 NCBI chr 7:99,954,492...99,961,026
Ensembl chr 7:99,954,492...99,961,026
JBrowse link
positive regulation of autophagy in response to ER overload term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2l11 BCL2 like 11 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 3:120,726,906...120,764,192
Ensembl chr 3:120,726,906...120,764,192
JBrowse link
G Bid BH3 interacting domain death agonist IMP RGD PMID:25772147 RGD:13782257 NCBI chr 4:153,439,812...153,465,247
Ensembl chr 4:153,442,218...153,465,203
JBrowse link
G Ddit3 DNA-damage inducible transcript 3 IMP RGD PMID:25772147 RGD:13782257 NCBI chr 7:70,578,564...70,585,074
Ensembl chr 7:70,580,198...70,585,084
JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO (MGI:4352622|PMID:19252488) RGD PMID:19252488 MGI:4352622 NCBI chr17:26,955,142...27,112,820
Ensembl chr17:26,955,142...27,112,820
JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:1321404|MGI:96824 (MGI:1860539|PMID:10880523)
UniProtKB:O95711 (PMID:10880523)
RGD PMID:10880523, PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr 2:32,820,275...32,833,223
Ensembl chr 2:32,820,322...32,833,125
JBrowse link
G Ly86 lymphocyte antigen 86 involved_in
acts_upstream_of_or_within
ISO UniProtKB:Q99467 (PMID:10880523)
MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523)
RGD PMID:10880523 MGI:1860539 NCBI chr17:28,104,535...28,191,447
Ensembl chr17:28,104,589...28,191,436
JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within ISO MGI:1194924|MGI:96824 (MGI:1860539|PMID:10880523) RGD PMID:10880523 MGI:1860539 NCBI chr 5:1,972,212...1,989,448 JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (MGI:2156302|PMID:11756671) RGD PMID:11756671 MGI:2156302 NCBI chr20:13,715,219...13,732,980
Ensembl chr20:13,732,198...13,732,859
JBrowse link
G Prkca protein kinase C, alpha involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:9830023)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:9830023 GO_REF:0000024 GO_REF:0000107 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Sash1 SAM and SH3 domain containing 1 involved_in ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 1:2,782,905...2,950,749
Ensembl chr 1:2,782,864...2,846,200
JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (MGI:5913054|PMID:28098138) RGD PMID:28098138 MGI:5913054 NCBI chr10:57,415,429...57,436,412
Ensembl chr10:57,415,832...57,436,368
JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (MGI:1335941|PMID:10215628) RGD PMID:10215628 MGI:1335941 NCBI chr 3:91,252,829...91,271,607
Ensembl chr 3:91,252,829...91,271,607
JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) RGD PMID:12731067 NCBI chr13:47,125,156...47,153,557
Ensembl chr13:47,126,741...47,154,292
JBrowse link
G Cd84 CD84 molecule involved_in ISO (MGI:5700297|PMID:20628063) RGD PMID:20628063 MGI:5700297 NCBI chr13:90,241,369...90,283,625
Ensembl chr13:90,244,681...90,277,865
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO (PMID:10652441) RGD PMID:10652441 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:169,446,774...169,463,760
Ensembl chr 1:169,446,805...169,534,896
JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (MGI:3624478|PMID:16643855) RGD PMID:16643855 MGI:3624478 NCBI chr 5:128,063,880...128,168,726
Ensembl chr 5:128,083,118...128,168,207
JBrowse link
regulation of response to DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tigar TP53 induced glycolysis regulatory phosphatase involved_in ISO (PMID:25928429) RGD PMID:25928429 NCBI chr 4:159,635,145...159,654,108
Ensembl chr 4:159,635,153...159,654,063
JBrowse link
response to DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smc1a structural maintenance of chromosomes 1A involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:11877377)
Ensembl
UniProt
RGD
PMID:11877377 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:21,710,976...21,755,708
Ensembl chr  X:21,711,019...21,755,525
JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:2180033 (MGI:3583382|PMID:15980864) RGD PMID:15980864 MGI:3583382 NCBI chr 5:139,982,404...140,015,541
Ensembl chr 5:139,983,680...140,015,541
JBrowse link
response to intra-S DNA damage checkpoint signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eme1 essential meiotic structure-specific endonuclease 1 involved_in ISO (PMID:23361013) RGD PMID:23361013 NCBI chr10:82,366,820...82,375,510
Ensembl chr10:82,367,084...82,374,171
JBrowse link
G Fbh1 F-box DNA helicase 1 involved_in
acts_upstream_of_or_within
ISO (PMID:23361013)
(MGI:5569591|PMID:23361013)
RGD PMID:23361013 MGI:5569591 NCBI chr17:70,399,093...70,437,151
Ensembl chr17:70,399,049...70,437,144
JBrowse link
G Mus81 MUS81 structure-specific endonuclease subunit involved_in ISO (PMID:23361013) RGD PMID:23361013 NCBI chr 1:220,862,474...220,867,973
Ensembl chr 1:220,862,386...220,867,815
JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit involved_in ISO (PMID:23361013) RGD PMID:23361013 NCBI chr10:11,787,756...11,808,326
Ensembl chr10:11,786,121...11,807,928
JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450)
(MGI:5490396|PMID:23609450)
RGD PMID:23609450 MGI:5490396 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:21220427) RGD PMID:21220427 NCBI chr 1:14,401,103...14,416,369
Ensembl chr 1:14,402,913...14,412,807
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19633
    response to stimulus 10423
      response to biotic stimulus 1732
        cellular response to biotic stimulus 346
          ER overload response + 13
          cellular response to external biotic stimulus 3
          cellular response to molecule of bacterial origin + 320
          cellular response to molecule of fungal origin 4
          cellular response to molecule of oomycetes origin 0
          cellular response to tumor cell 2
          response to cell cycle checkpoint signaling + 7
paths to the root