ONTOLOGY REPORT - ANNOTATIONS
Term: cellular response to molecule of bacterial origin
Accession: GO:0071219
browse the term
Definition: Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
Synonyms: exact_synonym: cellular response to bacteria associated molecule; cellular response to bacterial associated molecule; cellular response to bacterium associated molecule
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Acod1
aconitate decarboxylase 1
involved_in
ISO
(PMID:19014335)
RGD
PMID:19014335
NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687
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Ahr
aryl hydrocarbon receptor
involved_in
ISO
(PMID:29454749)
RGD
PMID:29454749
NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901
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Cyrib
CYFIP related Rac1 interactor B
involved_in
ISO IEA
(PMID:31285585) GO_REF:0000107
RGD Ensembl
PMID:31285585
GO_REF:0000107
NCBI chr 7:97,524,941...97,649,846
Ensembl chr 7:97,523,121...97,649,853
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Fcgr2b
Fc gamma receptor 2B
acts_upstream_of_or_within
ISO
MGI:1857166 (PMID:12385742)
RGD
PMID:12385742
NCBI chr13:85,725,897...85,740,517
Ensembl chr13:85,725,897...85,740,517
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Fzd5
frizzled class receptor 5
involved_in
ISO
(PMID:16601243)
RGD
PMID:16601243
NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612
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Ncam1
neural cell adhesion molecule 1
IEP
RGD
PMID:19853610
RGD:2325979
NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:58,762,116...59,061,971
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Nr1i2
nuclear receptor subfamily 1, group I, member 2
involved_in
ISO IEA
(PMID:25065623) GO_REF:0000107
RGD Ensembl
PMID:25065623
GO_REF:0000107
NCBI chr11:75,965,717...76,006,733
Ensembl chr11:75,965,632...76,002,380
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Tnf
tumor necrosis factor
IEP
streptococcal cell wall
RGD
PMID:1580332
RGD:38508902
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
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Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:16601243) GO_REF:0000107
RGD Ensembl
PMID:16601243
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
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Cd36
CD36 molecule
acts_upstream_of_or_within
ISO
MGI:1931790|MGI:3573941 (PMID:15690042)
RGD
PMID:15690042
NCBI chr 4:18,209,088...18,302,142
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Mir19a
microRNA 19a
involved_in
ISO
(PMID:22105995)
RGD
PMID:22105995
NCBI chr15:98,588,131...98,588,212
Ensembl chr15:98,588,131...98,588,212
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Mir19b1
microRNA 19b-1
involved_in
ISO
(PMID:22105995)
RGD
PMID:22105995
NCBI chr15:98,588,433...98,588,519
Ensembl chr15:98,588,433...98,588,519
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Mir19b2
microRNA 19b-2
involved_in
ISO
(PMID:22105995)
RGD
PMID:22105995
NCBI chr X:137,343,058...137,343,153
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Tirap
TIR domain containing adaptor protein
acts_upstream_of_or_within
ISO
MGI:3573942 (PMID:15690042)
RGD
PMID:15690042
NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:41,791,878...41,796,312
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Tlr10
toll-like receptor 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:43,758,940...43,768,352
Ensembl chr14:43,759,827...43,768,351
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Tlr2
toll-like receptor 2
acts_upstream_of_or_within involved_in
ISO
MGI:2674036 (PMID:15690042) (PMID:15356140)
RGD
PMID:15356140 PMID:15690042
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
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Cd14
CD14 molecule
involved_in
ISS ISO
GO_REF:0000024 (PMID:16880211)
UniProt RGD
PMID:16880211
GO_REF:0000024
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Cd36
CD36 molecule
involved_in
ISO ISS
(PMID:16880211) GO_REF:0000024
RGD UniProt
PMID:16880211
GO_REF:0000024
NCBI chr 4:18,209,088...18,302,142
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Cd36l1
CD36 molecule like 1
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:18,316,806...18,357,863
Ensembl chr 4:18,261,059...18,405,365
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LOC134486712
platelet glycoprotein 4-like
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 4:18,372,301...18,408,431
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Mir105
microRNA 105
involved_in
ISO
(PMID:19509287)
RGD
PMID:19509287
NCBI chr X:155,480,841...155,480,913
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Tlr2
toll-like receptor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:16880211) (PMID:19931471)
RGD
PMID:16880211 PMID:19931471
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
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Tlr6
toll-like receptor 6
involved_in acts_upstream_of_or_within
ISO IEA IBA
(PMID:16880211) GO_REF:0000107 GO_REF:0000033 (PMID:19931471)
RGD Ensembl GO_Central
PMID:16880211 PMID:19931471
GO_REF:0000033 GO_REF:0000107
NCBI chr14:43,715,809...43,727,019
Ensembl chr14:43,698,751...43,740,462
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Abca1
ATP binding cassette subfamily A member 1
involved_in
ISO IEA
(PMID:19752193) GO_REF:0000107
RGD Ensembl
PMID:19752193
GO_REF:0000107
NCBI chr 5:72,473,676...72,596,563
Ensembl chr 5:72,473,676...72,596,473
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Abcb1a
ATP binding cassette subfamily B member 1A
IEP
RGD
PMID:20300455
RGD:39456124
NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:26,312,409...26,397,135
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Abcc2
ATP binding cassette subfamily C member 2
IEP
RGD
PMID:20702406
RGD:11081005
NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:252,614,017...252,673,471
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Abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase
acts_upstream_of_or_within
ISO IEA
MGI:1856663 (PMID:8806812) GO_REF:0000107
RGD Ensembl
PMID:8806812
GO_REF:0000107
NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846
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Acod1
aconitate decarboxylase 1
involved_in
ISO IEA
(PMID:23609450), (PMID:23610393), (PMID:35662396) GO_REF:0000107
RGD Ensembl
PMID:23609450 PMID:23610393 PMID:35662396
GO_REF:0000107
NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687
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Adam9
ADAM metallopeptidase domain 9
involved_in
ISO
(PMID:22480688)
RGD
PMID:22480688
NCBI chr16:73,725,186...73,804,284
Ensembl chr16:73,725,114...73,804,646
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Adamts13
ADAM metallopeptidase with thrombospondin type 1 motif, 13
IEP
RGD
PMID:22871409
RGD:7207038
NCBI chr 3:30,697,354...30,736,539
Ensembl chr 3:30,697,942...30,736,540
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Aicda
activation-induced cytidine deaminase
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:157,444,697...157,456,356
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Aif1
allograft inflammatory factor 1
IEP
RGD
PMID:18717813
RGD:2313015
NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,652,243...3,657,339
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Akap8
A-kinase anchoring protein 8
involved_in
ISO IEA
(PMID:19531803) GO_REF:0000107
RGD Ensembl
PMID:19531803
GO_REF:0000107
NCBI chr 7:11,966,769...11,983,056
Ensembl chr 7:11,966,772...11,982,900
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Ankrd1
ankyrin repeat domain 1
involved_in
ISO IEA
(PMID:7730328) (PMID:17239933) GO_REF:0000107
RGD Ensembl
PMID:7730328 PMID:17239933
GO_REF:0000107
NCBI chr 1:243,228,460...243,237,014
Ensembl chr 1:243,228,448...243,263,751
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Arg1
arginase 1
IEP
RGD
PMID:9013624
RGD:4144055
NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:22,295,322...22,307,713
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Arg2
arginase 2
IEP
RGD
PMID:11250887
RGD:4144048
NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:103,668,988...103,694,375
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Arid5a
AT-rich interaction domain 5A
involved_in
ISO
(PMID:27671645)
RGD
PMID:27671645
NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:46,030,548...46,045,363
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Ass1
argininosuccinate synthase 1
IEP
alveolar macrophages
RGD
PMID:9879717
RGD:4139906
NCBI chr 3:35,144,765...35,194,632
Ensembl chr 3:35,144,999...35,194,627
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Axl
Axl receptor tyrosine kinase
involved_in
ISO
(PMID:19657094)
RGD
PMID:19657094
NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:90,392,864...90,424,009
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B2m
beta-2 microglobulin
involved_in
ISO
(PMID:23144825)
RGD
PMID:23144825
NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:129,549,318...129,555,356
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Bcl10
BCL10, immune signaling adaptor
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:16831874)
UniProt Ensembl RGD
PMID:16831874
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:237,501,134...237,511,829
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Bcr
BCR activator of RhoGEF and GTPase
acts_upstream_of_or_within
ISO
MGI:2154396 (PMID:7889565)
RGD
PMID:7889565
NCBI chr20:13,468,732...13,596,333
Ensembl chr20:13,468,732...13,596,333
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Bysl
bystin-like
IEP
RGD
PMID:15305856
RGD:2316201
NCBI chr 9:20,880,341...20,890,092
Ensembl chr 9:20,880,026...20,890,900
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Cactin
cactin, spliceosome C complex subunit
involved_in
ISO IEA
(PMID:20829348) GO_REF:0000107
RGD Ensembl
PMID:20829348
GO_REF:0000107
NCBI chr 7:9,042,125...9,047,807
Ensembl chr 7:9,042,129...9,047,558
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Camp
cathelicidin antimicrobial peptide
IEP
RGD
PMID:19879657 PMID:26527065 PMID:29396644
RGD:2316237 , RGD:435861584 , RGD:408427365
NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:118,720,184...118,721,998
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Capn2
calpain 2
IEP
RGD
PMID:23390485
RGD:13792657
NCBI chr13:96,681,902...96,732,625
Ensembl chr13:96,681,848...96,732,625
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Casp1
caspase 1
involved_in acts_upstream_of_or_within
ISO
(PMID:11536016), (PMID:22464733) (PMID:22464733)
RGD
PMID:11536016 PMID:22464733
NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:10,746,333...10,882,275
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Casp7
caspase 7
involved_in
ISO IEA
(PMID:22464733) GO_REF:0000107
RGD Ensembl
PMID:22464733
GO_REF:0000107
NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:265,442,676...265,482,512
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Ccl2
C-C motif chemokine ligand 2
involved_in
IEP IEA ISO
GO_REF:0000107 (PMID:14662900)
Ensembl RGD
PMID:14662900 PMID:8921263
GO_REF:0000107, RGD:8549522
NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875
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Ccl20
C-C motif chemokine ligand 20
IEP
RGD
PMID:15618187
RGD:7483631
NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:91,836,946...91,839,736
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Ccl27
C-C motif chemokine ligand 27
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 5:61,737,261...61,744,375
Ensembl chr 5:61,737,261...61,743,522
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Ccl5
C-C motif chemokine ligand 5
IEP
RGD
PMID:20578038
RGD:4889899
NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,738,651...68,824,884
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Ccr5
C-C motif chemokine receptor 5
involved_in
ISO
(PMID:10679098)
RGD
PMID:10679098
NCBI chr 8:132,629,097...132,660,980
Ensembl chr 8:132,629,683...132,637,594
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Cd14
CD14 molecule
involved_in acts_upstream_of_or_within
IEP IEA ISO IBA ISS
GO_REF:0000117 GO_REF:0000107 (PMID:24380872), (PMID:8612135) GO_REF:0000033 (PMID:12594207) (PMID:8612135) GO_REF:0000024
UniProt Ensembl RGD GO_Central
PMID:8612135 PMID:12594207 PMID:24380872 PMID:22511970
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:7183752
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Cd180
CD180 molecule
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:3581654 (PMID:10880523)
GO_Central RGD
PMID:10880523
GO_REF:0000033
NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982
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Cd200
Cd200 molecule
involved_in
IEA ISO
GO_REF:0000107 (PMID:26670206)
Ensembl RGD
PMID:26670206
GO_REF:0000107
NCBI chr11:68,916,200...68,943,570
Ensembl chr11:68,916,224...68,943,569
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Cd274
CD274 molecule
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:236,526,215...236,549,956
Ensembl chr 1:236,496,463...236,549,951
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Cd300lb
CD300 molecule-like family member b
acts_upstream_of_or_within
ISO
MGI:4829592 (PMID:22772446)
RGD
PMID:22772446
NCBI chr10:100,463,815...100,473,804
Ensembl chr10:100,463,815...100,473,804
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Cd36
CD36 molecule
acts_upstream_of_or_within
ISO
MGI:2447190 (PMID:16061696)
RGD
PMID:16061696
NCBI chr 4:18,209,088...18,302,142
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Cd40
CD40 molecule
IEP
RGD
PMID:19271152
RGD:5491178
NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847
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Cd68
Cd68 molecule
involved_in
ISO
(PMID:16157452)
RGD
PMID:16157452
NCBI chr10:54,880,562...54,882,441
Ensembl chr10:54,880,563...54,882,540
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Cd80
Cd80 molecule
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 (PMID:19047410)
GO_Central RGD
PMID:19047410
GO_REF:0000033
NCBI chr11:75,760,073...75,798,978
Ensembl chr11:75,760,147...75,797,540
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Cd86
CD86 molecule
acts_upstream_of_or_within involved_in
IEP ISO IBA
(PMID:19047410) GO_REF:0000033
RGD GO_Central
PMID:19047410 PMID:21039614
GO_REF:0000033, RGD:4892198
NCBI chr11:77,647,565...77,706,178
Ensembl chr11:77,647,600...77,725,361
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Cdc73
cell division cycle 73
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:17911113) GO_REF:0000107
UniProt RGD Ensembl
PMID:17911113
GO_REF:0000024 GO_REF:0000107
NCBI chr13:57,897,924...58,000,031
Ensembl chr13:57,883,983...57,999,978
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Cdk19
cyclin-dependent kinase 19
IEP
RGD
PMID:20066559
RGD:9590278
NCBI chr20:45,324,911...45,465,121
Ensembl chr20:45,324,862...45,465,121
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Cdk4
cyclin-dependent kinase 4
acts_upstream_of_or_within
ISO
(PMID:8543804)
RGD
PMID:8543804
NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163
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Cebpb
CCAAT/enhancer binding protein beta
IDA
RGD
PMID:18405661
RGD:10401220
NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:176,816,859...176,838,072
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Cebpe
CCAAT/enhancer binding protein epsilon
IEP
RGD
PMID:9593684
RGD:728287
NCBI chr15:32,139,716...32,141,476
Ensembl chr15:32,139,716...32,141,476
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Cfh
complement factor H
acts_upstream_of_or_within
IEP ISO
(PMID:19828624)
RGD
PMID:19828624 PMID:12121434
RGD:632369
NCBI chr13:54,063,079...54,164,523
Ensembl chr13:54,062,531...54,164,532
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Chmp5
charged multivesicular body protein 5
involved_in
ISO IEA ISS
(PMID:27812135) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:27812135
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:60,877,369...60,894,512
Ensembl chr 5:60,877,341...60,894,511
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Cmpk2
cytidine/uridine monophosphate kinase 2
acts_upstream_of_or_within
ISO IEA
(PMID:7751651) GO_REF:0000107
RGD Ensembl
PMID:7751651
GO_REF:0000107
NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:48,802,321...48,813,652
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Cpeb1
cytoplasmic polyadenylation element binding protein 1
IEP
RGD
PMID:21620800
RGD:9685153
NCBI chr 1:144,709,278...144,817,388
Ensembl chr 1:144,709,691...144,815,880
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Cr2
complement C3d receptor 2
acts_upstream_of_or_within
ISO
(PMID:19828624)
RGD
PMID:19828624
NCBI chr13:109,207,034...109,244,980
Ensembl chr13:109,213,867...109,244,552
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Csf2
colony stimulating factor 2
IEP
RGD
PMID:18387647
RGD:5131517
NCBI chr10:38,887,692...38,889,673
Ensembl chr10:38,887,692...38,890,031
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Csf3
colony stimulating factor 3
IEP
RGD
PMID:19732808
RGD:5133735
NCBI chr10:84,157,485...84,159,860
Ensembl chr10:84,157,211...84,159,860
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Ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component
involved_in
ISO IEA
(PMID:17911113) GO_REF:0000107
RGD Ensembl
PMID:17911113
GO_REF:0000107
NCBI chr 1:174,571,952...174,601,974
Ensembl chr 1:174,571,928...174,602,130
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Ctsg
cathepsin G
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr15:33,901,230...33,907,596
Ensembl chr15:33,901,754...33,907,596
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Cx3cr1
C-X3-C motif chemokine receptor 1
involved_in
IEP ISO
UniProtKB:P05067 (PMID:23499256)
RGD
PMID:23499256 PMID:10422773
RGD:4892028
NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:128,654,833...128,685,983
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Cxcl10
C-X-C motif chemokine ligand 10
acts_upstream_of_or_within involved_in
ISO IEA IBA
(PMID:23776175) GO_REF:0000107 GO_REF:0000033
RGD Ensembl GO_Central
PMID:23776175
GO_REF:0000033 GO_REF:0000107
NCBI chr14:15,989,066...15,991,263
Ensembl chr14:15,989,018...15,991,261
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Cxcl13
C-X-C motif chemokine ligand 13
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:13,912,858...13,917,920
Ensembl chr14:13,912,858...13,917,920
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Cxcl16
C-X-C motif chemokine ligand 16
involved_in
ISO
(PMID:11017100)
RGD
PMID:11017100
NCBI chr10:55,665,355...55,669,950
Ensembl chr10:55,664,742...55,670,226
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Cxcl2
C-X-C motif chemokine ligand 2
IEP
RGD
PMID:16239643
RGD:5135237
NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,465,242...17,467,255
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Cxcl3
C-X-C motif chemokine ligand 3
IEP
RGD
PMID:10738946
RGD:5135239
NCBI chr14:17,571,900...17,573,624
Ensembl chr14:17,571,900...17,573,624
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Cxcl6
C-X-C motif chemokine ligand 6
involved_in
IEP IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:8399143)
GO_Central Ensembl RGD
PMID:8399143 PMID:15778492
GO_REF:0000033 GO_REF:0000107, RGD:5135262
NCBI chr14:17,594,959...17,596,417
Ensembl chr14:17,594,959...17,596,417
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Cxcl9
C-X-C motif chemokine ligand 9
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:16,007,166...16,012,077
Ensembl chr14:16,007,204...16,014,299
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Cyp11a1
cytochrome P450, family 11, subfamily a, polypeptide 1
IEP
RGD
PMID:20665543
RGD:4145535
NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:67,270,556...67,330,196
G
Cyp17a1
cytochrome P450, family 17, subfamily a, polypeptide 1
IEP
RGD
PMID:20665543
RGD:4145535
NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:255,476,861...255,482,974
G
Dab2ip
DAB2 interacting protein
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:19948740)
UniProt Ensembl RGD
PMID:19948740
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:39,312,745...39,483,730
Ensembl chr 3:39,312,745...39,483,730
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Defa3
defensin alpha 3
acts_upstream_of_or_within
ISO
(PMID:11248802) MGI:94880|MGI:94882|MGI:99582 (PMID:11248802)
MGI RGD
PMID:11248802
NCBI chr16:77,235,885...77,238,041
Ensembl chr16:77,235,885...77,238,041
G
Ednrb
endothelin receptor type B
IEP
RGD
PMID:18091567
RGD:4892289
NCBI chr15:87,055,490...87,086,765
Ensembl chr15:87,057,691...87,086,765
G
Efnb2
ephrin B2
IEP
RGD
PMID:33794069
RGD:127285659
NCBI chr16:87,485,215...87,529,224
Ensembl chr16:87,485,198...87,529,208
G
Entpd1
ectonucleoside triphosphate diphosphohydrolase 1
involved_in
IEP IEA
GO_REF:0000117
UniProt RGD
PMID:23990338
GO_REF:0000117, RGD:9685490
NCBI chr 1:249,374,810...249,502,310
Ensembl chr 1:249,374,836...249,502,317
G
Entpd2
ectonucleoside triphosphate diphosphohydrolase 2
involved_in
IEP IEA
GO_REF:0000117
UniProt RGD
PMID:23990338
GO_REF:0000117, RGD:9685490
NCBI chr 3:28,611,722...28,617,237
Ensembl chr 3:28,611,772...28,618,184
G
Entpd3
ectonucleoside triphosphate diphosphohydrolase 3
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 8:129,124,540...129,155,528
Ensembl chr 8:129,124,709...129,156,252
G
Entpd8
ectonucleoside triphosphate diphosphohydrolase 8
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 3:28,283,392...28,295,686
Ensembl chr 3:28,285,777...28,293,686
G
Epas1
endothelial PAS domain protein 1
IEP
RGD
PMID:12099714
RGD:11041576
NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:13,544,389...13,624,729
G
Ephb2
Eph receptor B2
IEP
RGD
PMID:33794069
RGD:127285659
NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615
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Epsti1
epithelial stromal interaction 1
acts_upstream_of_or_within
ISO
(PMID:29217193)
RGD
PMID:29217193
NCBI chr15:59,692,712...59,791,376
Ensembl chr15:59,693,142...59,791,380
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Esr2
estrogen receptor 2
IMP
negative regulation of cell death
RGD
PMID:21127968
RGD:5508811
NCBI chr 6:100,589,553...100,645,240
Ensembl chr 6:100,545,206...100,644,709
G
Fcar
Fc alpha receptor
involved_in
ISO
(PMID:25339672)
RGD
PMID:25339672
NCBI chr 1:78,669,119...78,703,223
G
Fcgr2b
Fc gamma receptor 2B
IEP
RGD
PMID:19106808
RGD:5147925
NCBI chr13:85,725,897...85,740,517
Ensembl chr13:85,725,897...85,740,517
G
Fcgr3a
Fc gamma receptor 3A
IDA
RGD
PMID:19106808
RGD:5147925
NCBI chr13:85,782,636...85,792,656
Ensembl chr13:85,782,490...85,792,651
G
Fgfr1
Fibroblast growth factor receptor 1
IEP
RGD
PMID:30250515
RGD:25330356
NCBI chr16:73,194,631...73,249,855
Ensembl chr16:73,194,631...73,249,855
G
Fn1
fibronectin 1
IEP
RGD
PMID:11819312
RGD:7205475
NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:80,645,507...80,714,137
G
Fubp1
far upstream element binding protein 1
IEP
RGD
PMID:23797733
RGD:13673879
NCBI chr 2:243,819,529...243,846,544
Ensembl chr 2:243,819,218...243,846,428
G
Gata1
GATA binding protein 1
IDA
RGD
PMID:17687519
RGD:5131526
NCBI chr X:17,193,291...17,209,462
Ensembl chr X:17,201,633...17,209,459
G
Gbp1
guanylate binding protein 1
involved_in
ISO
(PMID:24715728)
RGD
PMID:24715728
NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:234,190,708...234,206,802 Ensembl chr 2:234,190,708...234,206,802
G
Gbp2
guanylate binding protein 2
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24715728) (PMID:18025219)
UniProt Ensembl RGD
PMID:18025219 PMID:24715728
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:234,005,727...234,021,812
Ensembl chr 2:234,008,590...234,021,810
G
Gbp4
guanylate binding protein 4
involved_in
ISO IEA
(PMID:24715728) GO_REF:0000107
RGD Ensembl
PMID:24715728
GO_REF:0000107
NCBI chr 2:233,978,163...233,992,124
Ensembl chr 2:233,978,486...233,992,120
G
Gbp5
guanylate binding protein 5
involved_in
ISO IEA
(PMID:24715728) GO_REF:0000107
RGD Ensembl
PMID:24715728
GO_REF:0000107
NCBI chr 2:233,910,999...233,930,320
Ensembl chr 2:233,902,113...233,930,826
G
Gfer
growth factor, augmenter of liver regeneration
IEP
RGD
PMID:23073658
RGD:9685733
NCBI chr10:14,223,023...14,225,736
Ensembl chr10:14,223,023...14,225,935
G
Gfi1
growth factor independent 1 transcriptional repressor
involved_in
ISO IEA
(PMID:20547752) GO_REF:0000107
RGD Ensembl
PMID:20547752
GO_REF:0000107
NCBI chr14:2,185,489...2,204,191
Ensembl chr14:2,187,286...2,196,730
G
Ghsr
growth hormone secretagogue receptor
IEP
RGD
PMID:15155262
RGD:12905047
NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:112,196,767...112,201,181
G
Git1
GIT ArfGAP 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:32460388) GO_REF:0000107
UniProt RGD Ensembl
PMID:32460388
GO_REF:0000024 GO_REF:0000107
NCBI chr10:62,840,165...62,854,508
Ensembl chr10:62,840,394...62,854,508
G
Grk6
G protein-coupled receptor kinase 6
IEP
RGD
PMID:23359120
RGD:13792782
NCBI chr17:9,182,160...9,198,380
Ensembl chr17:9,182,160...9,197,954
G
Gstp1
glutathione S-transferase pi 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:16023107)
BHF-UCL RGD
PMID:16023107
GO_REF:0000024
NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:210,767,237...210,769,705
G
Hadhb
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta
involved_in
ISO
(PMID:32513690)
RGD
PMID:32513690
NCBI chr 6:31,873,404...31,907,557
Ensembl chr 6:31,873,404...31,907,835
G
Hamp
hepcidin antimicrobial peptide
IEP
RGD
PMID:23506423
RGD:11041627
NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:95,298,307...95,300,297
G
Havcr2
hepatitis A virus cellular receptor 2
involved_in
ISO
(PMID:25337993)
RGD
PMID:25337993
NCBI chr10:31,383,801...31,415,334
Ensembl chr10:31,383,925...31,413,872
G
Hdac5
histone deacetylase 5
IEP
RGD
PMID:22933299
RGD:9590257
NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,652,656...87,694,244
G
Hif1a
hypoxia inducible factor 1 subunit alpha
IEP
RGD
PMID:19940979
RGD:5147884
NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323
G
Hmgb1
high mobility group box 1
involved_in
ISO
(PMID:28096568)
RGD
PMID:28096568
NCBI chr12:11,009,236...11,015,941
Ensembl chr16:39,039,050...39,041,327 Ensembl chr12:39,039,050...39,041,327
G
Hmgb2
high mobility group box 2
involved_in
ISO
(PMID:19811285)
RGD
PMID:19811285
NCBI chr16:37,721,374...37,723,950
Ensembl chr16:37,721,379...37,723,860
G
Hmgcs2
3-hydroxy-3-methylglutaryl-CoA synthase 2
IEP
RGD
PMID:11578593
RGD:1599044
NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:188,547,767...188,592,242
G
Hnrnpm
heterogeneous nuclear ribonucleoprotein M
IEP
RGD
PMID:14597422
RGD:10054261
NCBI chr 7:15,140,877...15,178,871
Ensembl chr 7:15,129,287...15,178,871
G
Hsf1
heat shock transcription factor 1
IEP
RGD
PMID:21540803
RGD:10402943
NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:110,076,710...110,103,665
G
Icam1
intercellular adhesion molecule 1
IEP
RGD
PMID:20674665
RGD:4145373
NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617
G
Ifnb1
interferon beta 1
IEP
RGD
PMID:18412159
RGD:401854236
NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:108,066,650...108,067,487
G
Ifng
interferon gamma
acts_upstream_of_or_within
ISO
(PMID:18791161)
RGD
PMID:18791161
NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216
G
Il10
interleukin 10
involved_in acts_upstream_of_or_within
ISO IEA
(PMID:23071313) GO_REF:0000107 (PMID:19047410), (PMID:21609717)
RGD Ensembl
PMID:19047410 PMID:21609717 PMID:23071313
GO_REF:0000107
NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580
G
Il12a
interleukin 12A
acts_upstream_of_or_within
ISO
(PMID:19047410)
RGD
PMID:19047410
NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:155,275,625...155,282,997
G
Il12b
interleukin 12B
acts_upstream_of_or_within
ISO
(PMID:18025219), (PMID:21606371)
RGD
PMID:18025219 PMID:21606371
NCBI chr10:29,390,300...29,405,194
Ensembl chr10:29,389,905...29,405,194
G
Il18
interleukin 18
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:11739527
GO_REF:0000033, RGD:729357
NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286
G
Il1a
interleukin 1 alpha
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:136,979,805...136,998,013
G
Il1b
interleukin 1 beta
involved_in
IEP IBA
GO_REF:0000033
GO_Central RGD
PMID:23200736
GO_REF:0000033, RGD:7175528
NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601
G
Il1f10
interleukin 1 family member 10
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:27,470,798...27,473,726
Ensembl chr 3:27,470,798...27,473,726
G
Il24
interleukin 24
IEP
RGD
PMID:12182458
RGD:5147432
NCBI chr13:44,905,362...44,910,760
Ensembl chr13:44,905,363...44,910,760
G
Il36a
interleukin 36, alpha
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:27,395,146...27,399,695
Ensembl chr 3:27,395,146...27,399,695
G
Il36b
interleukin 36, beta
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:27,422,980...27,521,344
Ensembl chr 3:27,423,171...27,428,678
G
Il36g
interleukin 36, gamma
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:27,346,675...27,352,839
Ensembl chr 3:27,346,670...27,352,834
G
Il36rn
interleukin 36 receptor antagonist
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:27,442,679...27,449,306
Ensembl chr 3:27,442,709...27,449,306
G
Il6
interleukin 6
involved_in acts_upstream_of_or_within
IEP IEA ISO
GO_REF:0000117 (PMID:19047410), (PMID:21606371) (PMID:23776175)
UniProt RGD
PMID:19047410 PMID:21606371 PMID:23776175 PMID:2789217
GO_REF:0000117, RGD:11049548
NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610
G
Irak1
interleukin-1 receptor-associated kinase 1
IEP
RGD
PMID:15793310
RGD:1579809
NCBI chr X:156,919,927...156,929,825
Ensembl chr X:156,920,081...156,929,825
G
Irf3
interferon regulatory factor 3
acts_upstream_of_or_within
ISO
(PMID:21606371)
RGD
PMID:21606371
NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:104,616,469...104,621,401
G
Irf8
interferon regulatory factor 8
acts_upstream_of_or_within
ISO IEA
MGI:1926332 (PMID:9348310) GO_REF:0000107
RGD Ensembl
PMID:9348310
GO_REF:0000107
NCBI chr19:65,699,284...65,721,066
Ensembl chr19:65,699,284...65,721,062
G
Irgm
immunity-related GTPase M
involved_in
ISO
(PMID:25891078)
RGD
PMID:25891078
NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228
G
Jak2
Janus kinase 2
acts_upstream_of_or_within
ISO IEA
(PMID:21606371) GO_REF:0000107
RGD Ensembl
PMID:21606371
GO_REF:0000107
NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:236,408,662...236,468,762
G
Jun
Jun proto-oncogene, AP-1 transcription factor subunit
involved_in
ISO
(PMID:25110868)
RGD
PMID:25110868
NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:114,973,151...115,013,285
G
Klrk1
killer cell lectin like receptor K1
acts_upstream_of_or_within
ISO
(PMID:14764662)
RGD
PMID:14764662
NCBI chr 4:164,767,377...164,778,453
Ensembl chr 4:164,767,946...164,778,382
G
Kmo
kynurenine 3-monooxygenase
IEP
RGD
PMID:26524415
RGD:13703043
NCBI chr13:90,089,340...90,121,108
Ensembl chr13:90,089,463...90,125,151
G
Lbp
lipopolysaccharide binding protein
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24380872) (PMID:12594207) (PMID:24120359)
UniProt Ensembl RGD
PMID:12594207 PMID:24120359 PMID:24380872
GO_REF:0000024 GO_REF:0000107
NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518
G
Lcn2
lipocalin 2
IEP
RGD
PMID:19329498
RGD:2316495
NCBI chr 3:36,078,432...36,081,851
Ensembl chr 3:36,078,436...36,081,842
G
Ldoc1
LDOC1, regulator of NFKB signaling
involved_in
ISO
(PMID:27812135)
RGD
PMID:27812135
NCBI chr X:144,837,879...145,110,607
Ensembl chr X:144,837,865...145,111,017
G
Litaf
lipopolysaccharide-induced TNF factor
acts_upstream_of_or_within
ISO
MGI:3687962 (PMID:16954198)
RGD
PMID:16954198
NCBI chr10:5,163,258...5,199,930
Ensembl chr10:5,163,242...5,199,930
G
Ltc4s
leukotriene C4 synthase
IEP
RGD
PMID:9794912
RGD:2316634
NCBI chr10:35,060,002...35,066,466
Ensembl chr10:35,061,437...35,063,768
G
Ly96
lymphocyte antigen 96
involved_in
ISO IBA
(PMID:24380872) GO_REF:0000033
RGD GO_Central
PMID:24380872
GO_REF:0000033
NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816
G
Malt1
MALT1 paracaspase
involved_in
ISO IEA
(PMID:16831874) GO_REF:0000107
RGD Ensembl
PMID:16831874
GO_REF:0000107
NCBI chr18:61,212,290...61,266,272
Ensembl chr18:61,212,317...61,266,272
G
Map2k3
mitogen activated protein kinase kinase 3
IDA
RGD
PMID:14670949
RGD:7495812
NCBI chr10:46,107,639...46,128,986
Ensembl chr10:46,106,548...46,129,004
G
Map2k7
mitogen activated protein kinase kinase 7
involved_in
IEA ISO
GO_REF:0000107 (PMID:9405446)
Ensembl RGD
PMID:9405446
GO_REF:0000107
NCBI chr12:7,389,032...7,398,377
Ensembl chr12:7,389,155...7,398,377
G
Mapk14
mitogen activated protein kinase 14
acts_upstream_of_or_within
ISO IEA
(PMID:23776175) GO_REF:0000107
RGD Ensembl
PMID:23776175
GO_REF:0000107
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294
G
Mapk8
mitogen-activated protein kinase 8
acts_upstream_of_or_within
ISO IEA
(PMID:23776175) GO_REF:0000107
RGD Ensembl
PMID:23776175
GO_REF:0000107
NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427
G
Mapk9
mitogen-activated protein kinase 9
IEP
RGD
PMID:9475517
RGD:2304245
NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,670,756...34,712,228
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISS ISO
GO_REF:0000024 (PMID:18955699)
UniProt RGD
PMID:18955699
GO_REF:0000024
NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:15,708,924...15,871,640
G
Mir107
microRNA 107
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 1:241,750,418...241,750,504
G
Mir10a
microRNA 10a
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr10:81,779,709...81,779,818
Ensembl chr10:81,779,709...81,779,818
G
Mir125a
microRNA 125a
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:67,350,675...67,350,759
G
Mir128-1
microRNA 128-1
involved_in
ISO
(PMID:24415783)
RGD
PMID:24415783
NCBI chr13:42,251,884...42,251,965
Ensembl chr13:42,251,884...42,251,965
G
Mir128-2
microRNA 128-2
involved_in
ISO
(PMID:24415783)
RGD
PMID:24415783
NCBI chr 8:120,963,795...120,963,878
G
Mir139
microRNA 139
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 1:165,290,859...165,290,926
Ensembl chr 1:165,290,856...165,290,933
G
Mir140
microRNA 140
involved_in acts_upstream_of_or_within
ISO
(PMID:30321456) (PMID:18762567)
RGD
PMID:18762567 PMID:30321456
NCBI chr19:52,375,293...52,375,391
Ensembl chr19:52,375,293...52,375,391
G
Mir142
microRNA 142
acts_upstream_of_or_within
ISO
(PMID:21536037)
RGD
PMID:21536037
NCBI chr10:73,055,104...73,055,190
Ensembl chr10:73,055,097...73,055,207
G
Mir146a
microRNA 146a
involved_in acts_upstream_of_or_within
ISO
(PMID:16885212) (PMID:18791161), (PMID:21247879)
RGD
PMID:16885212 PMID:18791161 PMID:21247879
NCBI chr10:28,349,996...28,350,090
G
Mir146b
microRNA 146b
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 1:255,144,860...255,144,947
Ensembl chr 1:255,144,860...255,144,947
G
Mir147
microRNA 147
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 3:130,176,275...130,176,353
Ensembl chr 3:130,176,275...130,176,353
G
Mir150
microRNA 150
acts_upstream_of_or_within
ISO
(PMID:18762567), (PMID:21247879)
RGD
PMID:18762567 PMID:21247879
NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:104,741,487...104,741,571
G
Mir155
microRNA 155
acts_upstream_of_or_within
ISO
(PMID:18762567), (PMID:21247879)
RGD
PMID:18762567 PMID:21247879
NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178
G
Mir16-2
microRNA 16-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 2:155,555,327...155,555,421
Ensembl chr 2:155,555,327...155,555,421
G
Mir181a2
microRNA 181a-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 3:43,025,563...43,025,679
Ensembl chr 3:43,025,563...43,025,679
G
Mir181b2
microRNA 181b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 3:43,026,666...43,026,753
Ensembl chr 3:43,026,666...43,026,753
G
Mir181c
microRNA 181c
acts_upstream_of_or_within
ISO
(PMID:18762567), (PMID:21247879)
RGD
PMID:18762567 PMID:21247879
NCBI chr19:40,888,291...40,888,396
Ensembl chr19:40,888,291...40,888,396
G
Mir182
microRNA 182
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 4:59,752,246...59,752,307
G
Mir184
microRNA 184
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 8:99,222,982...99,223,058
G
Mir187
microRNA 187
involved_in
ISO
(PMID:23071313)
RGD
PMID:23071313
NCBI chr18:16,005,947...16,006,050
G
Mir193a
microRNA 193a
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr10:65,170,306...65,170,417
G
Mir194-1
microRNA 194-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr13:99,382,716...99,382,798
Ensembl chr13:99,382,716...99,382,798
G
Mir194-2
microRNA 194-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 1:212,994,024...212,994,108
Ensembl chr 1:212,994,024...212,994,108
G
Mir199a2
microRNA 199a-2
acts_upstream_of_or_within
ISO
MGI:2676863 (PMID:21247879)
RGD
PMID:21247879
NCBI chr13:77,116,225...77,116,334
Ensembl chr13:77,116,225...77,116,334
G
Mir200c
microRNA 200c
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 4:159,209,965...159,210,033
G
Mir202
microRNA 202
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 1:204,184,345...204,184,416
G
Mir205
microRNA 205
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr13:107,564,535...107,564,642
G
Mir21
microRNA 21
involved_in
IEP ISO
(PMID:19946272), (PMID:29039542)
RGD
PMID:19946272 PMID:29039542 PMID:30542412
RGD:41410885
NCBI chr10:71,902,600...71,902,691
G
Mir210
microRNA 210
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:205,755,917...205,756,034
G
Mir217
microRNA 217
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr14:106,732,485...106,732,589
Ensembl chr14:106,732,485...106,732,589
G
Mir223
microRNA 223
acts_upstream_of_or_within involved_in
IEP ISO
(PMID:18762567), (PMID:18791161), (PMID:21247879) (PMID:34637033)
RGD
PMID:18762567 PMID:18791161 PMID:21247879 PMID:34637033 PMID:29707878
RGD:25823197
NCBI chr X:65,151,383...65,151,492
Ensembl chr X:65,151,383...65,151,492
G
Mir224
microRNA 224
acts_upstream_of_or_within
ISO
(PMID:18762567), (PMID:21247879)
RGD
PMID:18762567 PMID:21247879
NCBI chr X:155,107,130...155,107,211
G
Mir23b
microRNA 23b
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr17:1,819,386...1,819,482
G
Mir24-2
microRNA 24-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr19:40,859,455...40,859,562
G
Mir26a1
microRNA 26a-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 8:127,633,048...127,633,137
Ensembl chr 8:127,633,048...127,633,137
G
Mir26b
microRNA 26b
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 9:83,425,709...83,425,793
Ensembl chr 9:83,425,709...83,425,793
G
Mir27a
microRNA 27a
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr19:40,859,603...40,859,689
G
Mir293
microRNA 293
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 1:74,878,457...74,878,528
G
Mir29a
microRNA 29a
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 4:60,617,955...60,618,042
G
Mir29b1
microRNA 29b-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 4:60,618,334...60,618,414
G
Mir29b2
microRNA 29b-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr13:109,098,831...109,098,911
Ensembl chr13:109,098,827...109,098,916
G
Mir30b
microRNA 30b
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 7:102,021,543...102,021,629
G
Mir30c1
microRNA 30c-1
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 5:139,634,455...139,634,543
G
Mir30c2
microRNA 30c-2
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 9:33,253,682...33,253,765
Ensembl chr 9:33,253,682...33,253,765
G
Mir30d
microRNA 30d
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 7:102,025,345...102,025,426
G
Mir323
microRNA 323
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,546,944...134,547,029
Ensembl chr 6:134,546,944...134,547,029
G
Mir342
microRNA 342
acts_upstream_of_or_within
ISO
(PMID:18762567), (PMID:21247879)
RGD
PMID:18762567 PMID:21247879
NCBI chr 6:133,329,655...133,329,753
Ensembl chr 6:133,329,655...133,329,753
G
Mir345
microRNA 345
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:133,518,403...133,518,498
Ensembl chr 6:133,518,403...133,518,498
G
Mir381
microRNA 381
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,562,381...134,562,441
G
Mir383
microRNA 383
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr16:60,743,764...60,743,837
Ensembl chr16:60,743,764...60,743,837
G
Mir409
microRNA 409
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,579,185...134,579,261
G
Mir425
microRNA 425
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 8:118,143,084...118,143,166
Ensembl chr 8:118,143,084...118,143,166
G
Mir431
microRNA 431
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,326,449...134,326,562
Ensembl chr 6:134,326,449...134,326,562
G
Mir433
microRNA 433
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,327,358...134,327,450
Ensembl chr 6:134,327,351...134,327,456
G
Mir484
microRNA 484
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr10:1,394,905...1,394,981
G
Mir486
microRNA 486
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
G
Mir494
microRNA 494
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:134,550,114...134,550,198
G
Mir500
microRNA 500
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr X:17,930,647...17,930,726
Ensembl chr X:17,930,637...17,930,728
G
Mir598
microRNA 598
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr15:42,138,609...42,138,687
Ensembl chr15:42,138,609...42,138,688
G
Mir7-1
microRNA 7-1
acts_upstream_of_or_within
ISO
MGI:3619437 (PMID:21247879)
RGD
PMID:21247879
NCBI chr17:6,278,692...6,278,788
Ensembl chr17:6,278,692...6,278,788
G
Mir9
microRNA 9
acts_upstream_of_or_within
ISO
(PMID:21247879)
RGD
PMID:21247879
NCBI chr 9:1,167,436...1,167,545
Ensembl chr 9:1,167,436...1,167,545
G
Mir98
microRNA 98
acts_upstream_of_or_within
ISO
(PMID:21609717)
RGD
PMID:21609717
NCBI chr X:24,460,648...24,460,755
Ensembl chr X:24,460,648...24,460,755
G
Mirlet7g
microRNA let-7g
acts_upstream_of_or_within
ISO
(PMID:18762567)
RGD
PMID:18762567
NCBI chr 8:115,701,020...115,701,107
Ensembl chr 8:115,701,007...115,701,115
G
Mmp1
matrix metallopeptidase 1
IEP
RGD
PMID:21683124
RGD:7207286
NCBI chr 8:12,943,453...12,963,966
Ensembl chr 8:12,943,453...12,963,964
G
Mmp8
matrix metallopeptidase 8
involved_in
IMP ISO IEA
PMID:25049354 (PMID:25049354) GO_REF:0000107
RGD Ensembl
PMID:25049354 PMID:25049354
GO_REF:0000107, RGD:13792525
NCBI chr 8:13,008,873...13,018,729
Ensembl chr 8:13,008,890...13,018,729
G
Mmp9
matrix metallopeptidase 9
IEP
RGD
PMID:21683124
RGD:7207286
NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:174,084,123...174,111,442
G
Mrc1
mannose receptor, C type 1
acts_upstream_of_or_within
ISO IEA
(PMID:22832163) GO_REF:0000107
RGD Ensembl
PMID:22832163
GO_REF:0000107
NCBI chr17:82,157,725...82,239,411
Ensembl chr17:82,157,705...82,239,410
G
Myd88
MYD88, innate immune signal transduction adaptor
involved_in
ISO
(PMID:17660297)
RGD
PMID:17660297
NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:127,952,161...127,956,230
G
Ncl
nucleolin
IMP
RGD
PMID:21309751
RGD:9686449
NCBI chr 9:94,447,559...94,456,083
Ensembl chr 9:94,446,682...94,456,083
G
Nfkb1
nuclear factor kappa B subunit 1
involved_in acts_upstream_of_or_within
IDA IEA ISO
GO_REF:0000117 GO_REF:0000107 (PMID:31786261) (PMID:23776175)
UniProt Ensembl RGD
PMID:23776175 PMID:31786261 PMID:16842873
GO_REF:0000107 GO_REF:0000117, RGD:10045666
NCBI chr 2:226,689,745...226,805,897
Ensembl chr 2:226,689,745...226,783,088
G
Nfkbib
NFKB inhibitor beta
involved_in acts_upstream_of_or_within
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:20060382)
GO_Central Ensembl RGD
PMID:20060382
GO_REF:0000033 GO_REF:0000107
NCBI chr 1:93,173,817...93,181,387
Ensembl chr 1:93,173,820...93,326,366
G
Nfkbil1
NFKB inhibitor like 1
involved_in
ISO IEA ISS
(PMID:20829348) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:20829348
GO_REF:0000024 GO_REF:0000107
NCBI chr20:3,595,319...3,610,295
Ensembl chr20:3,595,284...3,610,294
G
Nfkbiz
NFKB inhibitor zeta
involved_in
ISO
MGI:3525252 (PMID:27129283)
RGD
PMID:27129283
NCBI chr11:58,251,720...58,279,767
Ensembl chr11:58,251,721...58,279,767
G
Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO IEA
(PMID:12483741), (PMID:28847925) GO_REF:0000107 (PMID:28847925)
RGD Ensembl
PMID:12483741 PMID:28847925
GO_REF:0000107
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,828,014...44,853,394
G
Nod2
nucleotide-binding oligomerization domain containing 2
involved_in
ISO IEA
(PMID:27812135) GO_REF:0000107
RGD Ensembl
PMID:27812135
GO_REF:0000107
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
G
Nos2
nitric oxide synthase 2
involved_in acts_upstream_of_or_within
IEP IEA ISO
GO_REF:0000117 (PMID:18025219), (PMID:18791161)
UniProt RGD
PMID:18025219 PMID:18791161 PMID:21975807
GO_REF:0000117, RGD:5508737
NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880
G
Npdc1
neural proliferation, differentiation and control, 1
involved_in
IEA
GO_REF:0000117
UniProt
GO_REF:0000117
NCBI chr 3:28,618,601...28,624,591
G
Nr1d1
nuclear receptor subfamily 1, group D, member 1
involved_in
IEA ISO
GO_REF:0000107 (PMID:18511497)
Ensembl RGD
PMID:18511497
GO_REF:0000107
NCBI chr10:84,224,599...84,231,812
Ensembl chr10:84,224,540...84,231,812
G
Nr1h3
nuclear receptor subfamily 1, group H, member 3
involved_in
ISO IEA
(PMID:18511497) GO_REF:0000107 (PMID:21187453)
RGD Ensembl
PMID:18511497 PMID:21187453
GO_REF:0000107
NCBI chr 3:97,614,616...97,632,053
Ensembl chr 3:97,614,616...97,624,532
G
Nr1h4
nuclear receptor subfamily 1, group H, member 4
involved_in
IEA ISO
GO_REF:0000107 (PMID:18972444)
Ensembl RGD
PMID:18972444
GO_REF:0000107
NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:25,733,471...25,829,389
G
Nuggc
nuclear GTPase, germinal center associated
involved_in
ISO
(PMID:19734146)
RGD
PMID:19734146
NCBI chr15:43,997,446...44,041,716
Ensembl chr15:43,997,438...44,041,643
G
Ogt
O-linked N-acetylglucosamine (GlcNAc) transferase
IMP
RGD
PMID:19098112
RGD:9590190
NCBI chr X:70,811,317...70,856,123
Ensembl chr X:70,811,319...70,856,123
G
Oprk1
opioid receptor, kappa 1
IEP
RGD
PMID:9645969
RGD:9831421
NCBI chr 5:18,657,866...18,675,671
Ensembl chr 5:18,657,871...18,675,671
G
P2ry2
purinergic receptor P2Y2
IEP
RGD
PMID:18689605
RGD:2316659
NCBI chr 1:164,764,119...164,779,578
Ensembl chr 1:164,759,213...164,781,852
G
Pabpn1
poly(A) binding protein, nuclear 1
involved_in
ISO
(PMID:22844456)
RGD
PMID:22844456
NCBI chr15:32,337,955...32,342,700
Ensembl chr15:32,338,089...32,342,691
G
Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:17911113)
UniProt Ensembl RGD
PMID:17911113
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:92,811,197...92,816,775
Ensembl chr 1:92,798,237...92,816,779
G
Park7
Parkinsonism associated deglycase
IEP
RGD
PMID:23847046
RGD:13462068
NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:166,636,552...166,659,825
G
Pdcd1lg2
programmed cell death 1 ligand 2
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 1:236,572,497...236,637,490
Ensembl chr 1:236,565,526...236,637,490
G
Pdcd4
programmed cell death 4
involved_in
ISO IEA
(PMID:19946272) GO_REF:0000107
RGD Ensembl
PMID:19946272
GO_REF:0000107
NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:262,926,656...262,950,189
G
Pde2a
phosphodiesterase 2A
involved_in
ISO
(PMID:21571906)
RGD
PMID:21571906
NCBI chr 1:165,235,623...165,327,466
Ensembl chr 1:165,235,623...165,327,466
G
Pde4b
phosphodiesterase 4B
acts_upstream_of_or_within
ISO IEA
MGI:2181444 (PMID:15585880) GO_REF:0000107
RGD Ensembl
PMID:15585880
GO_REF:0000107
NCBI chr 5:122,028,956...122,598,267
Ensembl chr 5:122,135,174...122,598,267
G
Pde4d
phosphodiesterase 4D
acts_upstream_of_or_within
ISO
MGI:2451168|MGI:3525068 (PMID:15585880)
RGD
PMID:15585880
NCBI chr 2:41,748,337...43,262,567
Ensembl chr 2:42,110,838...43,262,569
G
Pf4
platelet factor 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr14:17,582,477...17,583,392
Ensembl chr14:17,582,477...17,583,392
G
Plaa
phospholipase A2, activating protein
involved_in
ISO IEA ISS
(PMID:28007986) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:28007986
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:114,544,327...114,576,023
Ensembl chr 5:114,544,325...114,576,109
G
Plau
plasminogen activator, urokinase
IEP
RGD
PMID:19184369
RGD:7241806
NCBI chr15:3,505,485...3,511,987
Ensembl chr15:3,505,487...3,512,030
G
Plscr1
phospholipid scramblase 1
involved_in
ISO IEA
(PMID:17590392) GO_REF:0000107
RGD Ensembl
PMID:17590392
GO_REF:0000107
NCBI chr 8:101,662,512...101,684,474
Ensembl chr 8:101,664,056...101,684,614
G
Plscr2
phospholipid scramblase 2
involved_in
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:101,689,202...101,725,726
Ensembl chr 8:101,689,210...101,725,757
G
Plscr3
phospholipid scramblase 3
involved_in
ISO
(PMID:17590392)
RGD
PMID:17590392
NCBI chr10:55,064,349...55,070,120
Ensembl chr10:55,065,345...55,070,369
G
Plscr4
phospholipid scramblase 4
involved_in
ISO
(PMID:17590392)
RGD
PMID:17590392
NCBI chr 8:101,867,057...101,905,827
Ensembl chr 8:101,866,888...101,905,831
G
Ppard
peroxisome proliferator-activated receptor delta
IDA
RGD
PMID:15728586
RGD:1580656
NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,352,183...6,365,707
G
Ppargc1a
PPARG coactivator 1 alpha
IEP
RGD
PMID:19853624
RGD:10059687
NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213
G
Ppm1e
protein phosphatase, Mg2+/Mn2+ dependent, 1E
involved_in
ISO IEA
(PMID:27793001) GO_REF:0000107
RGD Ensembl
PMID:27793001
GO_REF:0000107
NCBI chr10:72,548,906...72,684,702
Ensembl chr10:72,552,469...72,684,546
G
Prpf8
pre-mRNA processing factor 8
IDA
RGD
PMID:1345341
RGD:10045884
NCBI chr10:60,829,778...60,852,887
Ensembl chr10:60,829,778...60,852,887
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Ptger3
prostaglandin E receptor 3
IEP
RGD
PMID:14636300
RGD:10043359
NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846
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Ptgs2
prostaglandin-endoperoxide synthase 2
IEP
RGD
PMID:18769055
RGD:2300271
NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320
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Pycard
PYD and CARD domain containing
involved_in
ISO IEA
(PMID:12486103) GO_REF:0000107
RGD Ensembl
PMID:12486103
GO_REF:0000107
NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:192,032,124...192,033,419
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Rara
retinoic acid receptor, alpha
involved_in
ISO IEA
(PMID:19752193) GO_REF:0000107
RGD Ensembl
PMID:19752193
GO_REF:0000107
NCBI chr10:84,379,780...84,424,371
Ensembl chr10:84,389,622...84,425,160
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Rela
RELA proto-oncogene, NF-kB subunit
involved_in
IEP IEA ISO IBA IDA
GO_REF:0000107 (PMID:20547752) GO_REF:0000033 (PMID:25762865)
Ensembl RGD GO_Central
PMID:20547752 PMID:25762865 PMID:9918814 PMID:15728586
GO_REF:0000033 GO_REF:0000107, RGD:2298880 , RGD:1580656
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
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Rhoa
ras homolog family member A
involved_in
ISO IEA
(PMID:19734146) GO_REF:0000107
RGD Ensembl
PMID:19734146
GO_REF:0000107
NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2446070|MGI:2660793 (PMID:11894097), (PMID:11894098) GO_REF:0000107
RGD Ensembl
PMID:11894097 PMID:11894098
GO_REF:0000107
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
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Sbno2
strawberry notch homolog 2
involved_in
ISO IEA
(PMID:25903009) GO_REF:0000107
RGD Ensembl
PMID:25903009
GO_REF:0000107
NCBI chr 7:10,256,221...10,300,175
Ensembl chr 7:10,253,248...10,300,176
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Selenos
selenoprotein S
involved_in
ISO IEA
(PMID:18675776) GO_REF:0000107
RGD Ensembl
PMID:18675776
GO_REF:0000107
NCBI chr 1:129,070,240...129,080,007
Ensembl chr 1:129,070,230...129,077,991
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Serpine1
serpin family E member 1
involved_in
IEP ISO IEA
(PMID:19916862) GO_REF:0000107
RGD Ensembl
PMID:19916862 PMID:20060032
GO_REF:0000107, RGD:13208812
NCBI chr12:25,237,977...25,248,356
Ensembl chr12:25,237,952...25,248,357
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Sgms1
sphingomyelin synthase 1
IEP
RGD
PMID:12353928
RGD:1302423
NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:239,409,991...239,505,774
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Shpk
sedoheptulokinase
involved_in
ISO IEA
(PMID:22682222) GO_REF:0000117 GO_REF:0000107
RGD UniProt Ensembl
PMID:22682222
GO_REF:0000107 GO_REF:0000117
NCBI chr10:58,316,065...58,340,489
Ensembl chr10:58,316,111...58,340,490
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Slc12a2
solute carrier family 12 member 2
involved_in
ISO
(PMID:31786261)
RGD
PMID:31786261
NCBI chr18:53,546,263...53,614,478
Ensembl chr18:53,546,333...53,614,470
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Slc7a5
solute carrier family 7 member 5
IEP
RGD
PMID:29687865
RGD:151357004
NCBI chr19:66,843,808...66,872,412
Ensembl chr19:66,843,808...66,872,412
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Smr3b
submaxillary gland androgen regulated protein 3B
involved_in
IDA
PMID:9321881
UniProt
PMID:9321881
RGD:8553737
NCBI chr14:20,067,850...20,072,520
Ensembl chr14:20,067,851...20,072,527
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Socs1
suppressor of cytokine signaling 1
IEP
RGD
PMID:21742974
RGD:151347181
NCBI chr10:5,389,574...5,391,265
Ensembl chr10:5,389,334...5,391,847
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Spon2
spondin 2
acts_upstream_of_or_within
ISO IEA
MGI:3026870 (PMID:14691481) GO_REF:0000107
RGD Ensembl
PMID:14691481
GO_REF:0000107
NCBI chr14:81,713,070...81,742,510
Ensembl chr14:81,731,188...81,742,609
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Src
SRC proto-oncogene, non-receptor tyrosine kinase
IEP
RGD
PMID:20149623
RGD:2325014
NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462
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Stap1
signal transducing adaptor family member 1
involved_in
ISO
(PMID:19100238)
RGD
PMID:19100238
NCBI chr14:22,301,278...22,336,218
Ensembl chr14:22,236,616...22,342,652
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Star
steroidogenic acute regulatory protein
IEP
RGD
PMID:20665543
RGD:4145535
NCBI chr16:72,969,824...72,974,447
Ensembl chr16:72,961,518...72,974,447
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Stat1
signal transducer and activator of transcription 1
acts_upstream_of_or_within
ISO
MGI:1861949 (PMID:21606371)
RGD
PMID:21606371
NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346
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Tbxa2r
thromboxane A2 receptor
IMP
RGD
PMID:10513923
RGD:11059603
NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:9,034,108...9,038,905
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Tfpi
tissue factor pathway inhibitor
IEP
RGD
PMID:11816723
RGD:727341
NCBI chr 3:89,939,862...89,989,253
Ensembl chr 3:89,939,868...89,980,742
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Thpo
thrombopoietin
IEP
RGD
PMID:20236022
RGD:11073693
Ensembl chr11:93,686,834...93,693,320
G
Ticam1
TIR domain containing adaptor molecule 1
involved_in
ISO
(PMID:17658277)
RGD
PMID:17658277
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,172,963...1,196,892
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Ticam2
TIR domain containing adaptor molecule 2
involved_in
ISO
(PMID:22685567) (PMID:19412184)
RGD
PMID:19412184 PMID:22685567
NCBI chr18:41,481,057...41,498,065
Ensembl chr18:41,478,539...41,512,243
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Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within
IEP IEA ISO
GO_REF:0000117 GO_REF:0000107 (PMID:20051628), (PMID:21880694), (PMID:28096568) MGI:1860755 (PMID:10880523), (PMID:14691481), (PMID:24740015) RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)
UniProt Ensembl RGD
PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:21880694 PMID:24740015 PMID:28096568 PMID:30321456 PMID:20438866 More...
GO_REF:0000107 GO_REF:0000117, RGD:7777075
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
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Tlr5
toll-like receptor 5
IEP
RGD
PMID:21308757
RGD:5129495
NCBI chr13:97,166,430...97,190,642
Ensembl chr13:97,166,405...97,192,525
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Tlr9
toll-like receptor 9
IEP
RGD
PMID:21308757 PMID:20655116
RGD:5129495 , RGD:5130179
NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:115,742,889...115,750,148
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Tnf
tumor necrosis factor
involved_in acts_upstream_of_or_within
IEP IEA ISO IMP
GO_REF:0000117 (PMID:29849090) (PMID:19047410), (PMID:20060382), (PMID:21606371)
UniProt RGD
PMID:19047410 PMID:20060382 PMID:21606371 PMID:29849090 PMID:15602748 PMID:10959811 PMID:17964727 More...
GO_REF:0000117, RGD:1582142 , RGD:14994703 , RGD:14995441
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
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Tnfaip3
TNF alpha induced protein 3
involved_in
ISO IEA
(PMID:19912257), (PMID:21127049), (PMID:21220427) GO_REF:0000107
RGD Ensembl
PMID:19912257 PMID:21127049 PMID:21220427
GO_REF:0000107
NCBI chr 1:15,528,921...15,543,993
Ensembl chr 1:15,528,921...15,543,979
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Tnfrsf1b
TNF receptor superfamily member 1B
involved_in
ISO
(PMID:22480688)
RGD
PMID:22480688
NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:162,353,848...162,387,411
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Tnfsf4
TNF superfamily member 4
involved_in
ISO
(PMID:20844189)
RGD
PMID:20844189
NCBI chr13:76,256,654...76,280,133
Ensembl chr13:76,256,654...76,280,133
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Tnip1
TNFAIP3 interacting protein 1
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr10:39,537,759...39,585,038
Ensembl chr10:39,537,437...39,585,158
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Tnip2
TNFAIP3 interacting protein 2
involved_in
IBA IEA ISO
GO_REF:0000033 GO_REF:0000107 (PMID:16633345)
GO_Central Ensembl RGD
PMID:16633345
GO_REF:0000033 GO_REF:0000107
NCBI chr14:80,452,936...80,470,141
Ensembl chr14:80,452,845...80,470,992
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Tnip3
TNFAIP3 interacting protein 3
involved_in
ISO IBA
(PMID:17088249) GO_REF:0000033
RGD GO_Central
PMID:17088249
GO_REF:0000033
NCBI chr 4:96,197,019...96,237,357
Ensembl chr 4:96,140,768...96,238,534
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Traf6
TNF receptor associated factor 6
acts_upstream_of_or_within
ISO
(PMID:23776175)
RGD
PMID:23776175
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
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Trem1
triggering receptor expressed on myeloid cells 1
IEP
RGD
PMID:26383906
RGD:127284850
NCBI chr 9:20,259,227...20,276,879
Ensembl chr 9:20,261,408...20,276,892
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Trim41
tripartite motif-containing 41
involved_in
ISO
(PMID:27812135)
RGD
PMID:27812135
NCBI chr10:33,676,348...33,687,432
Ensembl chr10:33,676,348...33,687,432
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Tspo
translocator protein
IEP
RGD
PMID:14678758
RGD:2317158
NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:116,600,210...116,610,460
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Vim
vimentin
involved_in
ISS ISO
GO_REF:0000024 (PMID:27812135)
UniProt RGD
PMID:27812135
GO_REF:0000024
NCBI chr17:81,577,261...81,585,746
Ensembl chr17:81,568,272...81,585,746
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Vldlr
very low density lipoprotein receptor
IEP
RGD
PMID:16376325
RGD:1625574
NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:234,240,121...234,272,154
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Vwf
von Willebrand factor
IEP
RGD
PMID:17708840
RGD:11079229
NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:160,047,982...160,177,757
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Wnt5a
Wnt family member 5A
involved_in
ISO IEA
(PMID:18174455) GO_REF:0000107
RGD Ensembl
PMID:18174455
GO_REF:0000107
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860
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Xbp1
X-box binding protein 1
involved_in
ISS ISO IEA
GO_REF:0000024 (PMID:12612580) GO_REF:0000107 (PMID:11460154)
UniProt RGD Ensembl
PMID:11460154 PMID:12612580
GO_REF:0000024 GO_REF:0000107
NCBI chr14:84,604,623...84,609,707
Ensembl chr14:84,604,107...84,609,706
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Zc3h12a
zinc finger CCCH type containing 12A
involved_in
ISO IEA ISS
(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989) GO_REF:0000107 (PMID:19322177), (PMID:21616078), (PMID:26000482) GO_REF:0000024
RGD Ensembl UniProt
PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 PMID:25861989 PMID:26000482 More...
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:142,661,199...142,669,985
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Zfp36
zinc finger protein 36
involved_in
ISO IEA ISS
(PMID:14679154), (PMID:14766228), (PMID:15187101) GO_REF:0000107 (PMID:10330172), (PMID:11533235), (PMID:22844456), (PMID:9703499) GO_REF:0000024
RGD Ensembl UniProt
PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 PMID:15187101 PMID:22844456 More...
GO_REF:0000024 GO_REF:0000107
NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:92,796,628...92,799,108
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Ccl20
C-C motif chemokine ligand 20
IEP
RGD
PMID:15618187
RGD:7483631
NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:91,836,946...91,839,736
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Cd14
CD14 molecule
acts_upstream_of_or_within
ISO
(PMID:12594207)
RGD
PMID:12594207
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Cd36
CD36 molecule
acts_upstream_of_or_within
ISO
MGI:1931790|MGI:2447190|MGI:3573941 (PMID:15690042), (PMID:16061696)
RGD
PMID:15690042 PMID:16061696
NCBI chr 4:18,209,088...18,302,142
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Defb43
defensin beta 43
involved_in
ISO
(PMID:26649771)
RGD
PMID:26649771
NCBI chr15:41,447,875...41,452,769
Ensembl chr15:41,447,875...41,452,769
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Lbp
lipopolysaccharide binding protein
acts_upstream_of_or_within
ISO IEA
(PMID:12594207) GO_REF:0000107
RGD Ensembl
PMID:12594207
GO_REF:0000107
NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518
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Mapk14
mitogen activated protein kinase 14
involved_in
ISO IEA
(PMID:26649771) GO_REF:0000107
RGD Ensembl
PMID:26649771
GO_REF:0000107
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294
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Rela
RELA proto-oncogene, NF-kB subunit
involved_in
ISO IEA
(PMID:26649771) GO_REF:0000107
RGD Ensembl
PMID:26649771
GO_REF:0000107
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2660793 (PMID:11894098) GO_REF:0000107
RGD Ensembl
PMID:11894098
GO_REF:0000107
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
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Tirap
TIR domain containing adaptor protein
acts_upstream_of_or_within
ISO
MGI:3573942 (PMID:15690042)
RGD
PMID:15690042
NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:41,791,878...41,796,312
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Tlr2
toll-like receptor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:26649771) MGI:2674036 (PMID:15690042) (PMID:12594207)
RGD
PMID:12594207 PMID:15690042 PMID:26649771
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
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Tlr4
toll-like receptor 4
acts_upstream_of_or_within
ISO IEA
MGI:1860885 (PMID:10549626) GO_REF:0000107
RGD Ensembl
PMID:10549626
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
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Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:12847223)
RGD
PMID:12847223
NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779
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Camp
cathelicidin antimicrobial peptide
IEP
RGD
PMID:19879657
RGD:2316237
NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:118,720,184...118,721,998
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Defb25
defensin beta 25
involved_in
ISO
(PMID:24955228)
RGD
PMID:24955228
NCBI chr 3:161,559,086...161,560,025
Ensembl chr 3:161,559,086...161,560,025
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Irf5
interferon regulatory factor 5
involved_in
ISO IEA
(PMID:22412986) GO_REF:0000107
RGD Ensembl
PMID:22412986
GO_REF:0000107
NCBI chr 4:59,092,914...59,104,596
Ensembl chr 4:59,081,357...59,112,552
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Nlrp3
NLR family, pyrin domain containing 3
involved_in
ISO IEA
(PMID:27374331) GO_REF:0000107
RGD Ensembl
PMID:27374331
GO_REF:0000107
NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,828,014...44,853,394
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Nod2
nucleotide-binding oligomerization domain containing 2
acts_upstream_of_or_within
IEP ISO
MGI:2680581 (PMID:16949315)
RGD
PMID:16949315 PMID:24169446
RGD:13204728
NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846
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Rela
RELA proto-oncogene, NF-kB subunit
involved_in
ISO IEA
(PMID:24955228) GO_REF:0000107
RGD Ensembl
PMID:24955228
GO_REF:0000107
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
G
Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2660793 (PMID:11894098) GO_REF:0000107
RGD Ensembl
PMID:11894098
GO_REF:0000107
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
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Tlr2
toll-like receptor 2
acts_upstream_of_or_within
ISO
(PMID:16949315)
RGD
PMID:16949315
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
G
Trem2
triggering receptor expressed on myeloid cells 2
involved_in
ISO
(PMID:12847223)
RGD
PMID:12847223
NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779
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Cd14
CD14 molecule
involved_in
ISO ISS
(PMID:16880211) GO_REF:0000024
RGD UniProt
PMID:16880211
GO_REF:0000024
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Tlr1
toll-like receptor 1
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:16880211) (PMID:19931471) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:16880211 PMID:19931471
GO_REF:0000033 GO_REF:0000107
NCBI chr14:43,737,761...43,750,389
Ensembl chr14:43,740,379...43,756,243
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Tlr2
toll-like receptor 2
involved_in acts_upstream_of_or_within
ISO
(PMID:16880211) (PMID:19931471)
RGD
PMID:16880211 PMID:19931471
NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194
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Akt1
AKT serine/threonine kinase 1
acts_upstream_of_or_within
ISO IEA
(PMID:24740015) GO_REF:0000107
RGD Ensembl
PMID:24740015
GO_REF:0000107
NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610
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Bcl10
BCL10, immune signaling adaptor
involved_in
ISO IEA ISS
(PMID:16831874) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:16831874
GO_REF:0000024 GO_REF:0000107
NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:237,501,134...237,511,829
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Bpi
bactericidal/permeability-increasing protein
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 3:167,329,513...167,356,217
Ensembl chr 3:167,329,530...167,356,396
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Cd14
CD14 molecule
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Cd180
CD180 molecule
acts_upstream_of
ISO
MGI:1321404|MGI:96824 (PMID:10880523)
RGD
PMID:10880523
NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982
G
Cd6
Cd6 molecule
involved_in
ISO IEA
(PMID:17601777) GO_REF:0000107
RGD Ensembl
PMID:17601777
GO_REF:0000107
NCBI chr 1:216,867,767...216,906,642
Ensembl chr 1:216,867,771...216,879,432
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Gsk3a
glycogen synthase kinase 3 alpha
involved_in
ISO
(PMID:16537926)
RGD
PMID:16537926
NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:89,943,669...89,953,593
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Gsk3b
glycogen synthase kinase 3 beta
involved_in
ISO
(PMID:16537926)
RGD
PMID:16537926
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
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Irak1
interleukin-1 receptor-associated kinase 1
involved_in acts_upstream_of_or_within
ISO IBA IEA
(PMID:10383454) GO_REF:0000033 GO_REF:0000117 GO_REF:0000107 (PMID:10549626), (PMID:12855817)
RGD GO_Central UniProt Ensembl
PMID:10383454 PMID:10549626 PMID:12855817
GO_REF:0000033 GO_REF:0000107 GO_REF:0000117
NCBI chr X:156,919,927...156,929,825
Ensembl chr X:156,920,081...156,929,825
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Irak2
interleukin-1 receptor-associated kinase 2
acts_upstream_of_or_within involved_in
ISO IBA IEA
(PMID:15082713) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:15082713
GO_REF:0000033 GO_REF:0000107
NCBI chr 4:148,341,704...148,398,211
Ensembl chr 4:148,341,719...148,398,210
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Irak3
interleukin-1 receptor-associated kinase 3
involved_in
ISO IBA IEA
(PMID:18156187) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:18156187
GO_REF:0000033 GO_REF:0000107
NCBI chr 7:57,538,522...57,600,166
Ensembl chr 7:57,539,557...57,598,706
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Irak4
interleukin-1 receptor-associated kinase 4
involved_in
IBA
GO_REF:0000033
GO_Central
GO_REF:0000033
NCBI chr 7:127,561,777...127,588,762
Ensembl chr 7:127,561,717...127,597,109
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Irf3
interferon regulatory factor 3
acts_upstream_of_or_within
ISO
(PMID:12855817), (PMID:12872135)
RGD
PMID:12855817 PMID:12872135
NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:104,616,469...104,621,401
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Jak2
Janus kinase 2
involved_in
ISO IEA
(PMID:10600756), (PMID:11536325) GO_REF:0000107
RGD Ensembl
PMID:10600756 PMID:11536325
GO_REF:0000107
NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:236,408,662...236,468,762
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Lbp
lipopolysaccharide binding protein
involved_in
ISO IBA IEA
(PMID:11739189), (PMID:8409400) GO_REF:0000033 GO_REF:0000107
RGD GO_Central Ensembl
PMID:8409400 PMID:11739189
GO_REF:0000033 GO_REF:0000107
NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518
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LOC100360522
ribosomal protein P1-like
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr17:8,436,843...8,437,954
G
Ly86
lymphocyte antigen 86
acts_upstream_of
ISO
MGI:1194924|MGI:96824 (PMID:10880523)
RGD
PMID:10880523
NCBI chr17:27,621,313...27,705,336
Ensembl chr17:27,621,313...27,692,743
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Ly96
lymphocyte antigen 96
acts_upstream_of involved_in
ISO IEA
MGI:1194924|MGI:96824 (PMID:10880523) GO_REF:0000117 (PMID:24380872)
RGD UniProt
PMID:10880523 PMID:24380872
GO_REF:0000117
NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816
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Lyn
LYN proto-oncogene, Src family tyrosine kinase
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20385881)
UniProt Ensembl RGD
PMID:20385881
GO_REF:0000024 GO_REF:0000107
NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:21,437,084...21,554,461
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Malt1
MALT1 paracaspase
involved_in
ISO IEA
(PMID:16831874) GO_REF:0000107
RGD Ensembl
PMID:16831874
GO_REF:0000107
NCBI chr18:61,212,290...61,266,272
Ensembl chr18:61,212,317...61,266,272
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Mapk1
mitogen activated protein kinase 1
acts_upstream_of_or_within
ISO IEA
(PMID:12872135) GO_REF:0000107
RGD Ensembl
PMID:12872135
GO_REF:0000107
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:97,462,025...97,527,825
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Mapk14
mitogen activated protein kinase 14
acts_upstream_of_or_within
ISO IEA
(PMID:12872135) GO_REF:0000107
RGD Ensembl
PMID:12872135
GO_REF:0000107
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294
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Mapk3
mitogen activated protein kinase 3
acts_upstream_of_or_within
ISO
(PMID:12872135)
RGD
PMID:12872135
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
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Mtdh
metadherin
involved_in
ISO IEA
(PMID:19740331) GO_REF:0000107
RGD Ensembl
PMID:19740331
GO_REF:0000107
NCBI chr 7:67,192,592...67,250,819
Ensembl chr 7:67,192,393...67,249,584
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Myd88
MYD88, innate immune signal transduction adaptor
acts_upstream_of_or_within
ISO IEA
MGI:2385681 (PMID:12855817) GO_REF:0000107
RGD Ensembl
PMID:12855817
GO_REF:0000107
NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:127,952,161...127,956,230
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Nfkbia
NFKB inhibitor alpha
acts_upstream_of_or_within
ISO
(PMID:12872135), (PMID:18261938)
RGD
PMID:12872135 PMID:18261938
NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:78,593,847...78,597,072
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Nos3
nitric oxide synthase 3
acts_upstream_of_or_within
ISO IEA
MGI:1857229 (PMID:15647265) GO_REF:0000107
RGD Ensembl
PMID:15647265
GO_REF:0000107
NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664
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Nr2c2
nuclear receptor subfamily 2, group C, member 2
acts_upstream_of_or_within
ISO
MGI:1860755 (PMID:9851930)
RGD
PMID:9851930
NCBI chr 4:126,167,350...126,223,942
Ensembl chr 4:126,168,085...126,223,942
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Plcg2
phospholipase C, gamma 2
involved_in
ISO
(PMID:32514138)
RGD
PMID:32514138
NCBI chr19:62,456,196...62,592,684
Ensembl chr19:62,453,259...62,592,684
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Prkce
protein kinase C, epsilon
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:16757566) MGI:3609215 (PMID:11696589)
UniProt Ensembl RGD
PMID:11696589 PMID:16757566
GO_REF:0000024 GO_REF:0000107
NCBI chr 6:13,718,050...14,204,931
Ensembl chr 6:13,718,050...14,204,288
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Ptafr
platelet-activating factor receptor
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:150,049,460...150,079,408
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Ptpn22
protein tyrosine phosphatase, non-receptor type 22
involved_in
ISO
(PMID:23991106)
RGD
PMID:23991106
NCBI chr 2:194,055,165...194,103,209
Ensembl chr 2:194,045,746...194,103,209
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Pxn
paxillin
involved_in
ISO
(PMID:16537926)
RGD
PMID:16537926
NCBI chr12:46,721,546...46,768,706
Ensembl chr12:46,721,546...46,768,697
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Ripk2
receptor-interacting serine-threonine kinase 2
acts_upstream_of_or_within
ISO IEA
MGI:2660793 (PMID:11894098) GO_REF:0000107
RGD Ensembl
PMID:11894098
GO_REF:0000107
NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663
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Rplp1
ribosomal protein lateral stalk subunit P1
acts_upstream_of_or_within
IEA
GO_REF:0000107
Ensembl
GO_REF:0000107
NCBI chr 8:71,289,539...71,290,872
Ensembl chr 8:71,289,535...71,290,872
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Scarb1
scavenger receptor class B, member 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr12:36,957,302...37,023,982
Ensembl chr12:36,957,496...37,023,980
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Spi1
Spi-1 proto-oncogene
involved_in
ISO IEA
(PMID:30718772) GO_REF:0000107
RGD Ensembl
PMID:30718772
GO_REF:0000107
NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:97,527,572...97,549,540
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Stat1
signal transducer and activator of transcription 1
acts_upstream_of_or_within
ISO
(PMID:12872135)
RGD
PMID:12872135
NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346
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Ticam1
TIR domain containing adaptor molecule 1
acts_upstream_of_or_within
ISO
MGI:2679794|MGI:3029019 (PMID:12855817), (PMID:12872135)
RGD
PMID:12855817 PMID:12872135
NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,172,963...1,196,892
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Tifab
TIFA inhibitor
acts_upstream_of_or_within
ISO
MGI:108072|MGI:5911664 (PMID:26458771)
RGD
PMID:26458771
NCBI chr17:8,438,622...8,441,750
Ensembl chr17:8,433,862...8,444,360
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Tlr4
toll-like receptor 4
involved_in acts_upstream_of_or_within NOT|acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (PMID:28098138) MGI:1194924|MGI:1321404|MGI:1341909 (PMID:10880523) UniProtKB:O95711|UniProtKB:Q9Y6Y9 (PMID:10880523)
Ensembl RGD
PMID:10880523 PMID:28098138
GO_REF:0000107
NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007
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Traf6
TNF receptor associated factor 6
involved_in acts_upstream_of_or_within
IBA ISO
GO_REF:0000033 MGI:2385852 (PMID:26458771)
GO_Central RGD
PMID:26458771
GO_REF:0000033
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
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Cactin
cactin, spliceosome C complex subunit
involved_in
ISO IEA
(PMID:20829348) GO_REF:0000107
RGD Ensembl
PMID:20829348
GO_REF:0000107
NCBI chr 7:9,042,125...9,047,807
Ensembl chr 7:9,042,129...9,047,558
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Defb21
defensin beta 21
involved_in
ISO
(PMID:33181266)
RGD
PMID:33181266
NCBI chr 3:161,503,090...161,504,507
Ensembl chr 3:161,503,090...161,504,507
G
Ltf
lactotransferrin
involved_in
ISO
(PMID:20345905)
RGD
PMID:20345905
NCBI chr 8:119,878,344...119,901,189
Ensembl chr 8:119,878,344...119,901,189
G
Nfkbil1
NFKB inhibitor like 1
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:20829348)
UniProt Ensembl RGD
PMID:20829348
GO_REF:0000024 GO_REF:0000107
NCBI chr20:3,595,319...3,610,295
Ensembl chr20:3,595,284...3,610,294
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Prdx2
peroxiredoxin 2
acts_upstream_of_or_within
ISO
MGI:2668456 (PMID:17325201)
RGD
PMID:17325201
NCBI chr19:40,085,788...40,091,083
Ensembl chr19:40,084,430...40,091,006
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Ptpn6
protein tyrosine phosphatase, non-receptor type 6
involved_in
ISO IEA
UniProtKB:P97797 (PMID:17954568) GO_REF:0000107
RGD Ensembl
PMID:17954568
GO_REF:0000107
NCBI chr 4:159,212,320...159,237,069
Ensembl chr 4:159,212,320...159,237,069
G
Sirpa
signal-regulatory protein alpha
involved_in
ISO
(PMID:17954568)
RGD
PMID:17954568
NCBI chr 3:137,272,932...137,311,279
Ensembl chr 3:137,273,042...137,311,279
G
Trib1
tribbles pseudokinase 1
involved_in
ISO IEA
(PMID:17452330) GO_REF:0000107
RGD Ensembl
PMID:17452330
GO_REF:0000107
NCBI chr 7:93,096,001...93,102,547
Ensembl chr 7:93,095,973...93,117,480
G
Bmp6
bone morphogenetic protein 6
involved_in
ISO IEA
(PMID:19252488) GO_REF:0000107
RGD Ensembl
PMID:19252488
GO_REF:0000107
NCBI chr17:26,523,704...26,785,558
Ensembl chr17:26,523,704...26,675,261
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Cd14
CD14 molecule
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:24380872)
UniProt Ensembl RGD
PMID:24380872
GO_REF:0000024 GO_REF:0000107
NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292
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Cd180
CD180 molecule
acts_upstream_of_or_within involved_in
ISO IEA IBA
UniProtKB:O95711 (PMID:10880523) GO_REF:0000117 MGI:1321404|MGI:96824 (PMID:10880523) GO_REF:0000033
RGD UniProt GO_Central
PMID:10880523
GO_REF:0000033 GO_REF:0000117
NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982
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Ly86
lymphocyte antigen 86
acts_upstream_of_or_within involved_in
ISO IEA IBA
UniProtKB:Q99467 (PMID:10880523) GO_REF:0000107 MGI:1194924|MGI:96824 (PMID:10880523) GO_REF:0000033
RGD Ensembl GO_Central
PMID:10880523
GO_REF:0000033 GO_REF:0000107
NCBI chr17:27,621,313...27,705,336
Ensembl chr17:27,621,313...27,692,743
G
Ly96
lymphocyte antigen 96
acts_upstream_of_or_within involved_in
ISO IBA
MGI:1194924|MGI:96824 (PMID:10880523) GO_REF:0000033
RGD GO_Central
PMID:10880523
GO_REF:0000033
NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816
G
Mif
macrophage migration inhibitory factor
involved_in
ISO
(PMID:11756671)
RGD
PMID:11756671
NCBI chr20:12,767,138...12,791,222
Ensembl chr 4:134,041,774...134,042,121 Ensembl chr20:134,041,774...134,042,121
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Prkca
protein kinase C, alpha
involved_in
ISS IEA ISO
GO_REF:0000024 GO_REF:0000107 (PMID:9830023)
UniProt Ensembl RGD
PMID:9830023
GO_REF:0000024 GO_REF:0000107
NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572
G
Ptpn11
protein tyrosine phosphatase, non-receptor type 11
involved_in
IEA ISO
GO_REF:0000107 (PMID:17954568)
Ensembl RGD
PMID:17954568
GO_REF:0000107
NCBI chr12:41,026,079...41,085,577
Ensembl chr12:41,043,785...41,085,577
G
Sash1
SAM and SH3 domain containing 1
acts_upstream_of_or_within
ISO IEA
(PMID:23776175) GO_REF:0000107
RGD Ensembl
PMID:23776175
GO_REF:0000107
NCBI chr 1:4,940,207...5,238,777
Ensembl chr 1:4,940,207...5,238,530
G
Scimp
SLP adaptor and CSK interacting membrane protein
involved_in
ISO
(PMID:28098138)
RGD
PMID:28098138
NCBI chr10:56,006,243...56,026,357
Ensembl chr10:56,006,243...56,026,357
G
Traf6
TNF receptor associated factor 6
involved_in
ISO
(PMID:10215628)
RGD
PMID:10215628
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
G
Cd55
CD55 molecule (Cromer blood group)
involved_in
ISO
(PMID:12731067)
RGD
PMID:12731067
NCBI chr13:44,409,574...44,438,913
Ensembl chr13:44,409,587...44,438,107
G
Cd84
CD84 molecule
involved_in
ISO
(PMID:20628063)
RGD
PMID:20628063
NCBI chr13:86,859,979...86,899,984
Ensembl chr13:86,859,990...86,894,318
G
Cx3cl1
C-X3-C motif chemokine ligand 1
involved_in
ISO IEA
(PMID:10652441) GO_REF:0000107
RGD Ensembl
PMID:10652441
GO_REF:0000107
NCBI chr19:10,233,326...10,244,856
Ensembl chr19:10,233,329...10,242,999
G
Trim5
tripartite motif-containing 5
involved_in
ISO
(PMID:21512573)
RGD
PMID:21512573
NCBI chr 1:168,132,277...168,149,263
Ensembl chr 1:168,132,308...168,141,657
G
Tut4
terminal uridylyl transferase 4
acts_upstream_of_or_within
ISO
(PMID:16643855)
RGD
PMID:16643855
NCBI chr 5:128,354,975...128,535,288
Ensembl chr 5:128,431,719...128,535,656
G
Acod1
aconitate decarboxylase 1
involved_in
ISO IEA
(PMID:23609450) GO_REF:0000107 GO_REF:0000117
RGD Ensembl UniProt
PMID:23609450
GO_REF:0000107 GO_REF:0000117
NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687
G
Tnfaip3
TNF alpha induced protein 3
involved_in
ISO IEA
(PMID:21220427) GO_REF:0000107
RGD Ensembl
PMID:21220427
GO_REF:0000107
NCBI chr 1:15,528,921...15,543,993
Ensembl chr 1:15,528,921...15,543,979
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