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ONTOLOGY REPORT - ANNOTATIONS

Term:cellular response to molecule of bacterial origin
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Accession:GO:0071219 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus by molecules of bacterial origin such as peptides derived from bacterial flagellin.
Synonyms:exact_synonym: cellular response to bacteria associated molecule;   cellular response to bacterial associated molecule;   cellular response to bacterium associated molecule


show annotations for term's descendants           Sort by:
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:19014335) RGD PMID:19014335 NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687 		JBrowse link
G Ahr aryl hydrocarbon receptor involved_in ISO (PMID:29454749) RGD PMID:29454749 NCBI chr 6:57,961,423...57,998,901
Ensembl chr 6:57,961,423...57,998,901 		JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO
IEA 		(PMID:31285585)
GO_REF:0000107 		RGD
Ensembl		 PMID:31285585 GO_REF:0000107 NCBI chr 7:97,524,941...97,649,846
Ensembl chr 7:97,523,121...97,649,853 		JBrowse link
G Fcgr2b Fc gamma receptor 2B acts_upstream_of_or_within ISO MGI:1857166 (PMID:12385742) RGD PMID:12385742 NCBI chr13:85,725,897...85,740,517
Ensembl chr13:85,725,897...85,740,517 		JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO (PMID:16601243) RGD PMID:16601243 NCBI chr 9:73,606,860...73,614,039
Ensembl chr 9:73,606,860...73,618,612 		JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:19853610 RGD:2325979 NCBI chr 8:58,762,088...59,062,131
Ensembl chr 8:58,762,116...59,061,971 		JBrowse link
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 involved_in ISO
IEA 		(PMID:25065623)
GO_REF:0000107 		RGD
Ensembl		 PMID:25065623 GO_REF:0000107 NCBI chr11:75,965,717...76,006,733
Ensembl chr11:75,965,632...76,002,380 		JBrowse link
G Tnf tumor necrosis factor IEP streptococcal cell wall RGD PMID:1580332 RGD:38508902 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA 		(PMID:16601243)
GO_REF:0000107 		RGD
Ensembl		 PMID:16601243 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860 		JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:3573941 (PMID:15690042) RGD PMID:15690042 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Mir19a microRNA 19a involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:98,588,131...98,588,212
Ensembl chr15:98,588,131...98,588,212 		JBrowse link
G Mir19b1 microRNA 19b-1 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr15:98,588,433...98,588,519
Ensembl chr15:98,588,433...98,588,519 		JBrowse link
G Mir19b2 microRNA 19b-2 involved_in ISO (PMID:22105995) RGD PMID:22105995 NCBI chr  X:137,343,058...137,343,153 JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (PMID:15690042) RGD PMID:15690042 NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:41,791,878...41,796,312 		JBrowse link
G Tlr10 toll-like receptor 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:43,758,940...43,768,352
Ensembl chr14:43,759,827...43,768,351 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within
involved_in 		ISO MGI:2674036 (PMID:15690042)
(PMID:15356140) 		RGD PMID:15356140 PMID:15690042 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISS
ISO 		GO_REF:0000024
(PMID:16880211) 		UniProt
RGD		 PMID:16880211 GO_REF:0000024 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Cd36 CD36 molecule involved_in ISO
ISS 		(PMID:16880211)
GO_REF:0000024 		RGD
UniProt		 PMID:16880211 GO_REF:0000024 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd36l1 CD36 molecule like 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:18,316,806...18,357,863
Ensembl chr 4:18,261,059...18,405,365 		JBrowse link
G LOC134486712 platelet glycoprotein 4-like involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:18,372,301...18,408,431 JBrowse link
G Mir105 microRNA 105 involved_in ISO (PMID:19509287) RGD PMID:19509287 NCBI chr  X:155,480,841...155,480,913 JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:16880211)
(PMID:19931471) 		RGD PMID:16880211 PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
G Tlr6 toll-like receptor 6 involved_in
acts_upstream_of_or_within 		ISO
IEA
IBA 		(PMID:16880211)
GO_REF:0000107
GO_REF:0000033
(PMID:19931471) 		RGD
Ensembl
GO_Central		 PMID:16880211 PMID:19931471 GO_REF:0000033 GO_REF:0000107 NCBI chr14:43,715,809...43,727,019
Ensembl chr14:43,698,751...43,740,462 		JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO
IEA 		(PMID:19752193)
GO_REF:0000107 		RGD
Ensembl		 PMID:19752193 GO_REF:0000107 NCBI chr 5:72,473,676...72,596,563
Ensembl chr 5:72,473,676...72,596,473 		JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20300455 RGD:39456124 NCBI chr 4:26,312,403...26,488,456
Ensembl chr 4:26,312,409...26,397,135 		JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:252,613,875...252,672,459
Ensembl chr 1:252,614,017...252,673,471 		JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO
IEA 		MGI:1856663 (PMID:8806812)
GO_REF:0000107 		RGD
Ensembl		 PMID:8806812 GO_REF:0000107 NCBI chr 3:35,377,587...35,480,843
Ensembl chr 3:35,377,391...35,480,846 		JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO
IEA 		(PMID:23609450), (PMID:23610393), (PMID:35662396)
GO_REF:0000107 		RGD
Ensembl		 PMID:23609450 PMID:23610393 PMID:35662396 GO_REF:0000107 NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687 		JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:73,725,186...73,804,284
Ensembl chr16:73,725,114...73,804,646 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:30,697,354...30,736,539
Ensembl chr 3:30,697,942...30,736,540 		JBrowse link
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:157,446,120...157,455,958
Ensembl chr 4:157,444,697...157,456,356 		JBrowse link
G Aif1 allograft inflammatory factor 1 IEP RGD PMID:18717813 RGD:2313015 NCBI chr20:3,651,435...3,657,341
Ensembl chr20:3,652,243...3,657,339 		JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO
IEA 		(PMID:19531803)
GO_REF:0000107 		RGD
Ensembl		 PMID:19531803 GO_REF:0000107 NCBI chr 7:11,966,769...11,983,056
Ensembl chr 7:11,966,772...11,982,900 		JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO
IEA 		(PMID:7730328)
(PMID:17239933)
GO_REF:0000107 		RGD
Ensembl		 PMID:7730328 PMID:17239933 GO_REF:0000107 NCBI chr 1:243,228,460...243,237,014
Ensembl chr 1:243,228,448...243,263,751 		JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:22,295,093...22,307,720
Ensembl chr 1:22,295,322...22,307,713 		JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:103,669,001...103,694,375
Ensembl chr 6:103,668,988...103,694,375 		JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (PMID:27671645) RGD PMID:27671645 NCBI chr 9:46,030,513...46,058,729
Ensembl chr 9:46,030,548...46,045,363 		JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:35,144,765...35,194,632
Ensembl chr 3:35,144,999...35,194,627 		JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:90,392,864...90,424,123
Ensembl chr 1:90,392,864...90,424,009 		JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:129,549,236...129,555,354
Ensembl chr 3:129,549,318...129,555,356 		JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:16831874) 		UniProt
Ensembl
RGD		 PMID:16831874 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:237,501,134...237,511,829 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (PMID:7889565) RGD PMID:7889565 NCBI chr20:13,468,732...13,596,333
Ensembl chr20:13,468,732...13,596,333 		JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:20,880,341...20,890,092
Ensembl chr 9:20,880,026...20,890,900 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO
IEA 		(PMID:20829348)
GO_REF:0000107 		RGD
Ensembl		 PMID:20829348 GO_REF:0000107 NCBI chr 7:9,042,125...9,047,807
Ensembl chr 7:9,042,129...9,047,558 		JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 PMID:26527065 PMID:29396644 RGD:2316237, RGD:435861584, RGD:408427365 NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:118,720,184...118,721,998 		JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:96,681,902...96,732,625
Ensembl chr13:96,681,848...96,732,625 		JBrowse link
G Casp1 caspase 1 involved_in
acts_upstream_of_or_within 		ISO (PMID:11536016), (PMID:22464733)
(PMID:22464733) 		RGD PMID:11536016 PMID:22464733 NCBI chr 8:10,746,338...10,882,295
Ensembl chr 8:10,746,333...10,882,275 		JBrowse link
G Casp7 caspase 7 involved_in ISO
IEA 		(PMID:22464733)
GO_REF:0000107 		RGD
Ensembl		 PMID:22464733 GO_REF:0000107 NCBI chr 1:265,442,647...265,481,938
Ensembl chr 1:265,442,676...265,482,512 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
IEA
ISO 		GO_REF:0000107
(PMID:14662900) 		Ensembl
RGD		 PMID:14662900 PMID:8921263 GO_REF:0000107, RGD:8549522 NCBI chr10:67,503,077...67,504,875
Ensembl chr10:67,503,077...67,504,875 		JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:91,836,946...91,839,736 		JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:61,737,261...61,744,375
Ensembl chr 5:61,737,261...61,743,522 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:68,820,330...68,824,906
Ensembl chr10:68,738,651...68,824,884 		JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in ISO (PMID:10679098) RGD PMID:10679098 NCBI chr 8:132,629,097...132,660,980
Ensembl chr 8:132,629,683...132,637,594 		JBrowse link
G Cd14 CD14 molecule involved_in
acts_upstream_of_or_within 		IEP
IEA
ISO
IBA
ISS 		GO_REF:0000117
GO_REF:0000107
(PMID:24380872), (PMID:8612135)
GO_REF:0000033
(PMID:12594207)
(PMID:8612135)
GO_REF:0000024 		UniProt
Ensembl
RGD
GO_Central		 PMID:8612135 PMID:12594207 PMID:24380872 PMID:22511970 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117, RGD:7183752 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:3581654 (PMID:10880523) 		GO_Central
RGD		 PMID:10880523 GO_REF:0000033 NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982 		JBrowse link
G Cd200 Cd200 molecule involved_in IEA
ISO 		GO_REF:0000107
(PMID:26670206) 		Ensembl
RGD		 PMID:26670206 GO_REF:0000107 NCBI chr11:68,916,200...68,943,570
Ensembl chr11:68,916,224...68,943,569 		JBrowse link
G Cd274 CD274 molecule involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:236,526,215...236,549,956
Ensembl chr 1:236,496,463...236,549,951 		JBrowse link
G Cd300lb CD300 molecule-like family member b acts_upstream_of_or_within ISO MGI:4829592 (PMID:22772446) RGD PMID:22772446 NCBI chr10:100,463,815...100,473,804
Ensembl chr10:100,463,815...100,473,804 		JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:2447190 (PMID:16061696) RGD PMID:16061696 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:174,209,113...174,224,592
Ensembl chr 3:174,209,719...174,224,847 		JBrowse link
G Cd68 Cd68 molecule involved_in ISO (PMID:16157452) RGD PMID:16157452 NCBI chr10:54,880,562...54,882,441
Ensembl chr10:54,880,563...54,882,540 		JBrowse link
G Cd80 Cd80 molecule involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
(PMID:19047410) 		GO_Central
RGD		 PMID:19047410 GO_REF:0000033 NCBI chr11:75,760,073...75,798,978
Ensembl chr11:75,760,147...75,797,540 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in 		IEP
ISO
IBA 		(PMID:19047410)
GO_REF:0000033 		RGD
GO_Central		 PMID:19047410 PMID:21039614 GO_REF:0000033, RGD:4892198 NCBI chr11:77,647,565...77,706,178
Ensembl chr11:77,647,600...77,725,361 		JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:17911113)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:17911113 GO_REF:0000024 GO_REF:0000107 NCBI chr13:57,897,924...58,000,031
Ensembl chr13:57,883,983...57,999,978 		JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:45,324,911...45,465,121
Ensembl chr20:45,324,862...45,465,121 		JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (PMID:8543804) RGD PMID:8543804 NCBI chr 7:64,771,453...64,774,891
Ensembl chr 7:64,771,147...64,775,163 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:176,817,005...176,818,436
Ensembl chr 3:176,816,859...176,838,072 		JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:32,139,716...32,141,476
Ensembl chr15:32,139,716...32,141,476 		JBrowse link
G Cfh complement factor H acts_upstream_of_or_within IEP
ISO 		(PMID:19828624) RGD PMID:19828624 PMID:12121434 RGD:632369 NCBI chr13:54,063,079...54,164,523
Ensembl chr13:54,062,531...54,164,532 		JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO
IEA
ISS 		(PMID:27812135)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:27812135 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:60,877,369...60,894,512
Ensembl chr 5:60,877,341...60,894,511 		JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO
IEA 		(PMID:7751651)
GO_REF:0000107 		RGD
Ensembl		 PMID:7751651 GO_REF:0000107 NCBI chr 6:48,802,150...48,813,652
Ensembl chr 6:48,802,321...48,813,652 		JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:144,709,278...144,817,388
Ensembl chr 1:144,709,691...144,815,880 		JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (PMID:19828624) RGD PMID:19828624 NCBI chr13:109,207,034...109,244,980
Ensembl chr13:109,213,867...109,244,552 		JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:38,887,692...38,889,673
Ensembl chr10:38,887,692...38,890,031 		JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:84,157,485...84,159,860
Ensembl chr10:84,157,211...84,159,860 		JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO
IEA 		(PMID:17911113)
GO_REF:0000107 		RGD
Ensembl		 PMID:17911113 GO_REF:0000107 NCBI chr 1:174,571,952...174,601,974
Ensembl chr 1:174,571,928...174,602,130 		JBrowse link
G Ctsg cathepsin G involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:33,901,230...33,907,596
Ensembl chr15:33,901,754...33,907,596 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEP
ISO 		UniProtKB:P05067 (PMID:23499256) RGD PMID:23499256 PMID:10422773 RGD:4892028 NCBI chr 8:128,661,294...128,679,048
Ensembl chr 8:128,654,833...128,685,983 		JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		(PMID:23776175)
GO_REF:0000107
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:23776175 GO_REF:0000033 GO_REF:0000107 NCBI chr14:15,989,066...15,991,263
Ensembl chr14:15,989,018...15,991,261 		JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:13,912,858...13,917,920
Ensembl chr14:13,912,858...13,917,920 		JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (PMID:11017100) RGD PMID:11017100 NCBI chr10:55,665,355...55,669,950
Ensembl chr10:55,664,742...55,670,226 		JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 IEP RGD PMID:16239643 RGD:5135237 NCBI chr14:17,465,210...17,467,255
Ensembl chr14:17,465,242...17,467,255 		JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 IEP RGD PMID:10738946 RGD:5135239 NCBI chr14:17,571,900...17,573,624
Ensembl chr14:17,571,900...17,573,624 		JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IEP
IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:8399143) 		GO_Central
Ensembl
RGD		 PMID:8399143 PMID:15778492 GO_REF:0000033 GO_REF:0000107, RGD:5135262 NCBI chr14:17,594,959...17,596,417
Ensembl chr14:17,594,959...17,596,417 		JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:16,007,166...16,012,077
Ensembl chr14:16,007,204...16,014,299 		JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:67,318,665...67,330,196
Ensembl chr 8:67,270,556...67,330,196 		JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:255,476,861...255,484,547
Ensembl chr 1:255,476,861...255,482,974 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:19948740) 		UniProt
Ensembl
RGD		 PMID:19948740 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:39,312,745...39,483,730
Ensembl chr 3:39,312,745...39,483,730 		JBrowse link
G Defa3 defensin alpha 3 acts_upstream_of_or_within ISO (PMID:11248802)
MGI:94880|MGI:94882|MGI:99582 (PMID:11248802) 		MGI
RGD		 PMID:11248802 NCBI chr16:77,235,885...77,238,041
Ensembl chr16:77,235,885...77,238,041 		JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:87,055,490...87,086,765
Ensembl chr15:87,057,691...87,086,765 		JBrowse link
G Efnb2 ephrin B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr16:87,485,215...87,529,224
Ensembl chr16:87,485,198...87,529,208 		JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 involved_in IEP
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:23990338 GO_REF:0000117, RGD:9685490 NCBI chr 1:249,374,810...249,502,310
Ensembl chr 1:249,374,836...249,502,317 		JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 involved_in IEP
IEA 		GO_REF:0000117 UniProt
RGD		 PMID:23990338 GO_REF:0000117, RGD:9685490 NCBI chr 3:28,611,722...28,617,237
Ensembl chr 3:28,611,772...28,618,184 		JBrowse link
G Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 8:129,124,540...129,155,528
Ensembl chr 8:129,124,709...129,156,252 		JBrowse link
G Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:28,283,392...28,295,686
Ensembl chr 3:28,285,777...28,293,686 		JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:13,543,252...13,626,147
Ensembl chr 6:13,544,389...13,624,729 		JBrowse link
G Ephb2 Eph receptor B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr 5:154,179,065...154,360,459
Ensembl chr 5:154,179,065...154,360,615 		JBrowse link
G Epsti1 epithelial stromal interaction 1 acts_upstream_of_or_within ISO (PMID:29217193) RGD PMID:29217193 NCBI chr15:59,692,712...59,791,376
Ensembl chr15:59,693,142...59,791,380 		JBrowse link
G Esr2 estrogen receptor 2 IMP negative regulation of cell death RGD PMID:21127968 RGD:5508811 NCBI chr 6:100,589,553...100,645,240
Ensembl chr 6:100,545,206...100,644,709 		JBrowse link
G Fcar Fc alpha receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:78,669,119...78,703,223 JBrowse link
G Fcgr2b Fc gamma receptor 2B IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:85,725,897...85,740,517
Ensembl chr13:85,725,897...85,740,517 		JBrowse link
G Fcgr3a Fc gamma receptor 3A IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:85,782,636...85,792,656
Ensembl chr13:85,782,490...85,792,651 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:73,194,631...73,249,855
Ensembl chr16:73,194,631...73,249,855 		JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:80,645,507...80,714,137 		JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:243,819,529...243,846,544
Ensembl chr 2:243,819,218...243,846,428 		JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:17,193,291...17,209,462
Ensembl chr  X:17,201,633...17,209,459 		JBrowse link
G Gbp1 guanylate binding protein 1 involved_in ISO (PMID:24715728) RGD PMID:24715728 NCBI chr 2:234,071,366...234,106,012
Ensembl chr 2:234,190,708...234,206,802
Ensembl chr 2:234,190,708...234,206,802 		JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24715728)
(PMID:18025219) 		UniProt
Ensembl
RGD		 PMID:18025219 PMID:24715728 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:234,005,727...234,021,812
Ensembl chr 2:234,008,590...234,021,810 		JBrowse link
G Gbp4 guanylate binding protein 4 involved_in ISO
IEA 		(PMID:24715728)
GO_REF:0000107 		RGD
Ensembl		 PMID:24715728 GO_REF:0000107 NCBI chr 2:233,978,163...233,992,124
Ensembl chr 2:233,978,486...233,992,120 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO
IEA 		(PMID:24715728)
GO_REF:0000107 		RGD
Ensembl		 PMID:24715728 GO_REF:0000107 NCBI chr 2:233,910,999...233,930,320
Ensembl chr 2:233,902,113...233,930,826 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:14,223,023...14,225,736
Ensembl chr10:14,223,023...14,225,935 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in ISO
IEA 		(PMID:20547752)
GO_REF:0000107 		RGD
Ensembl		 PMID:20547752 GO_REF:0000107 NCBI chr14:2,185,489...2,204,191
Ensembl chr14:2,187,286...2,196,730 		JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:112,196,158...112,201,666
Ensembl chr 2:112,196,767...112,201,181 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:32460388)
GO_REF:0000107 		UniProt
RGD
Ensembl		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 NCBI chr10:62,840,165...62,854,508
Ensembl chr10:62,840,394...62,854,508 		JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,182,160...9,198,380
Ensembl chr17:9,182,160...9,197,954 		JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO 		GO_REF:0000024
(PMID:16023107) 		BHF-UCL
RGD		 PMID:16023107 GO_REF:0000024 NCBI chr 1:210,767,237...210,770,242
Ensembl chr 1:210,767,237...210,769,705 		JBrowse link
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta involved_in ISO (PMID:32513690) RGD PMID:32513690 NCBI chr 6:31,873,404...31,907,557
Ensembl chr 6:31,873,404...31,907,835 		JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:95,298,332...95,300,271
Ensembl chr 1:95,298,307...95,300,297 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (PMID:25337993) RGD PMID:25337993 NCBI chr10:31,383,801...31,415,334
Ensembl chr10:31,383,925...31,413,872 		JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:87,653,139...87,688,078
Ensembl chr10:87,652,656...87,694,244 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:98,357,788...98,405,068
Ensembl chr 6:98,359,910...98,405,323 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:28096568) RGD PMID:28096568 NCBI chr12:11,009,236...11,015,941
Ensembl chr16:39,039,050...39,041,327
Ensembl chr12:39,039,050...39,041,327 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:37,721,374...37,723,950
Ensembl chr16:37,721,379...37,723,860 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:188,547,767...188,592,242 		JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:15,140,877...15,178,871
Ensembl chr 7:15,129,287...15,178,871 		JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:110,076,710...110,103,665
Ensembl chr 7:110,076,710...110,103,665 		JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:27,829,688...27,841,618
Ensembl chr 8:27,829,161...27,841,617 		JBrowse link
G Ifnb1 interferon beta 1 IEP RGD PMID:18412159 RGD:401854236 NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:108,066,650...108,067,487 		JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (PMID:18791161) RGD PMID:18791161 NCBI chr 7:55,789,180...55,793,216
Ensembl chr 7:55,761,736...55,793,216 		JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within 		ISO
IEA 		(PMID:23071313)
GO_REF:0000107
(PMID:19047410), (PMID:21609717) 		RGD
Ensembl		 PMID:19047410 PMID:21609717 PMID:23071313 GO_REF:0000107 NCBI chr13:45,024,921...45,029,586
Ensembl chr13:45,025,087...45,029,580 		JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (PMID:19047410) RGD PMID:19047410 NCBI chr 2:155,275,734...155,282,997
Ensembl chr 2:155,275,625...155,282,997 		JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (PMID:18025219), (PMID:21606371) RGD PMID:18025219 PMID:21606371 NCBI chr10:29,390,300...29,405,194
Ensembl chr10:29,389,905...29,405,194 		JBrowse link
G Il18 interleukin 18 involved_in IEP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:11739527 GO_REF:0000033, RGD:729357 NCBI chr 8:59,802,072...59,829,275
Ensembl chr 8:59,809,592...59,831,286 		JBrowse link
G Il1a interleukin 1 alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:136,979,804...136,990,236
Ensembl chr 3:136,979,805...136,998,013 		JBrowse link
G Il1b interleukin 1 beta involved_in IEP
IBA 		GO_REF:0000033 GO_Central
RGD		 PMID:23200736 GO_REF:0000033, RGD:7175528 NCBI chr 3:137,030,200...137,036,581
Ensembl chr 3:137,030,205...137,036,601 		JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,470,798...27,473,726
Ensembl chr 3:27,470,798...27,473,726 		JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:44,905,362...44,910,760
Ensembl chr13:44,905,363...44,910,760 		JBrowse link
G Il36a interleukin 36, alpha involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,395,146...27,399,695
Ensembl chr 3:27,395,146...27,399,695 		JBrowse link
G Il36b interleukin 36, beta involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,422,980...27,521,344
Ensembl chr 3:27,423,171...27,428,678 		JBrowse link
G Il36g interleukin 36, gamma involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,346,675...27,352,839
Ensembl chr 3:27,346,670...27,352,834 		JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:27,442,679...27,449,306
Ensembl chr 3:27,442,709...27,449,306 		JBrowse link
G Il6 interleukin 6 involved_in
acts_upstream_of_or_within 		IEP
IEA
ISO 		GO_REF:0000117
(PMID:19047410), (PMID:21606371)
(PMID:23776175) 		UniProt
RGD		 PMID:19047410 PMID:21606371 PMID:23776175 PMID:2789217 GO_REF:0000117, RGD:11049548 NCBI chr 4:5,889,999...5,894,575
Ensembl chr 4:5,889,999...5,894,610 		JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 IEP RGD PMID:15793310 RGD:1579809 NCBI chr  X:156,919,927...156,929,825
Ensembl chr  X:156,920,081...156,929,825 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:21606371) RGD PMID:21606371 NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:104,616,469...104,621,401 		JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO
IEA 		MGI:1926332 (PMID:9348310)
GO_REF:0000107 		RGD
Ensembl		 PMID:9348310 GO_REF:0000107 NCBI chr19:65,699,284...65,721,066
Ensembl chr19:65,699,284...65,721,062 		JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,734,640...33,742,720
Ensembl chr10:33,732,961...33,743,228 		JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO
IEA 		(PMID:21606371)
GO_REF:0000107 		RGD
Ensembl		 PMID:21606371 GO_REF:0000107 NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:236,408,662...236,468,762 		JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:115,009,900...115,012,993
Ensembl chr 5:114,973,151...115,013,285 		JBrowse link
G Klrk1 killer cell lectin like receptor K1 acts_upstream_of_or_within ISO (PMID:14764662) RGD PMID:14764662 NCBI chr 4:164,767,377...164,778,453
Ensembl chr 4:164,767,946...164,778,382 		JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:90,089,340...90,121,108
Ensembl chr13:90,089,463...90,125,151 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24380872)
(PMID:12594207)
(PMID:24120359) 		UniProt
Ensembl
RGD		 PMID:12594207 PMID:24120359 PMID:24380872 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518 		JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:36,078,432...36,081,851
Ensembl chr 3:36,078,436...36,081,842 		JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr  X:144,837,879...145,110,607
Ensembl chr  X:144,837,865...145,111,017 		JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:3687962 (PMID:16954198) RGD PMID:16954198 NCBI chr10:5,163,258...5,199,930
Ensembl chr10:5,163,242...5,199,930 		JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:35,060,002...35,066,466
Ensembl chr10:35,061,437...35,063,768 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO
IBA 		(PMID:24380872)
GO_REF:0000033 		RGD
GO_Central		 PMID:24380872 GO_REF:0000033 NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO
IEA 		(PMID:16831874)
GO_REF:0000107 		RGD
Ensembl		 PMID:16831874 GO_REF:0000107 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:61,212,317...61,266,272 		JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:46,107,639...46,128,986
Ensembl chr10:46,106,548...46,129,004 		JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in IEA
ISO 		GO_REF:0000107
(PMID:9405446) 		Ensembl
RGD		 PMID:9405446 GO_REF:0000107 NCBI chr12:7,389,032...7,398,377
Ensembl chr12:7,389,155...7,398,377 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO
IEA 		(PMID:23776175)
GO_REF:0000107 		RGD
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO
IEA 		(PMID:23776175)
GO_REF:0000107 		RGD
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,670,756...34,712,228 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO 		GO_REF:0000024
(PMID:18955699) 		UniProt
RGD		 PMID:18955699 GO_REF:0000024 NCBI chr 2:15,708,732...15,871,639
Ensembl chr 2:15,708,924...15,871,640 		JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:241,750,418...241,750,504 JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr10:81,779,709...81,779,818
Ensembl chr10:81,779,709...81,779,818 		JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:67,350,675...67,350,759
Ensembl chr 1:67,350,675...67,350,759 		JBrowse link
G Mir128-1 microRNA 128-1 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr13:42,251,884...42,251,965
Ensembl chr13:42,251,884...42,251,965 		JBrowse link
G Mir128-2 microRNA 128-2 involved_in ISO (PMID:24415783) RGD PMID:24415783 NCBI chr 8:120,963,795...120,963,878 JBrowse link
G Mir139 microRNA 139 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:165,290,859...165,290,926
Ensembl chr 1:165,290,856...165,290,933 		JBrowse link
G Mir140 microRNA 140 involved_in
acts_upstream_of_or_within 		ISO (PMID:30321456)
(PMID:18762567) 		RGD PMID:18762567 PMID:30321456 NCBI chr19:52,375,293...52,375,391
Ensembl chr19:52,375,293...52,375,391 		JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (PMID:21536037) RGD PMID:21536037 NCBI chr10:73,055,104...73,055,190
Ensembl chr10:73,055,097...73,055,207 		JBrowse link
G Mir146a microRNA 146a involved_in
acts_upstream_of_or_within 		ISO (PMID:16885212)
(PMID:18791161), (PMID:21247879) 		RGD PMID:16885212 PMID:18791161 PMID:21247879 NCBI chr10:28,349,996...28,350,090 JBrowse link
G Mir146b microRNA 146b acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:255,144,860...255,144,947
Ensembl chr 1:255,144,860...255,144,947 		JBrowse link
G Mir147 microRNA 147 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 3:130,176,275...130,176,353
Ensembl chr 3:130,176,275...130,176,353 		JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr 1:104,741,487...104,741,571
Ensembl chr 1:104,741,487...104,741,571 		JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr11:37,261,114...37,261,178
Ensembl chr11:37,261,114...37,261,178 		JBrowse link
G Mir16-2 microRNA 16-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 2:155,555,327...155,555,421
Ensembl chr 2:155,555,327...155,555,421 		JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:43,025,563...43,025,679
Ensembl chr 3:43,025,563...43,025,679 		JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 3:43,026,666...43,026,753
Ensembl chr 3:43,026,666...43,026,753 		JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr19:40,888,291...40,888,396
Ensembl chr19:40,888,291...40,888,396 		JBrowse link
G Mir182 microRNA 182 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 4:59,752,246...59,752,307 JBrowse link
G Mir184 microRNA 184 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 8:99,222,982...99,223,058 JBrowse link
G Mir187 microRNA 187 involved_in ISO (PMID:23071313) RGD PMID:23071313 NCBI chr18:16,005,947...16,006,050 JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr10:65,170,306...65,170,417 JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:99,382,716...99,382,798
Ensembl chr13:99,382,716...99,382,798 		JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:212,994,024...212,994,108
Ensembl chr 1:212,994,024...212,994,108 		JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:2676863 (PMID:21247879) RGD PMID:21247879 NCBI chr13:77,116,225...77,116,334
Ensembl chr13:77,116,225...77,116,334 		JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 4:159,209,965...159,210,033 JBrowse link
G Mir202 microRNA 202 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:204,184,345...204,184,416 JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:107,564,535...107,564,642 JBrowse link
G Mir21 microRNA 21 involved_in IEP
ISO 		(PMID:19946272), (PMID:29039542) RGD PMID:19946272 PMID:29039542 PMID:30542412 RGD:41410885 NCBI chr10:71,902,600...71,902,691 JBrowse link
G Mir210 microRNA 210 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 1:205,755,923...205,756,032
Ensembl chr 1:205,755,917...205,756,034 		JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr14:106,732,485...106,732,589
Ensembl chr14:106,732,485...106,732,589 		JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within
involved_in 		IEP
ISO 		(PMID:18762567), (PMID:18791161), (PMID:21247879)
(PMID:34637033) 		RGD PMID:18762567 PMID:18791161 PMID:21247879 PMID:34637033 PMID:29707878 RGD:25823197 NCBI chr  X:65,151,383...65,151,492
Ensembl chr  X:65,151,383...65,151,492 		JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr  X:155,107,130...155,107,211 JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr17:1,819,386...1,819,482 JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr19:40,859,455...40,859,562 JBrowse link
G Mir26a1 microRNA 26a-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:127,633,048...127,633,137
Ensembl chr 8:127,633,048...127,633,137 		JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 9:83,425,709...83,425,793
Ensembl chr 9:83,425,709...83,425,793 		JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr19:40,859,603...40,859,689 JBrowse link
G Mir293 microRNA 293 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 1:74,878,457...74,878,528 JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:60,617,955...60,618,042 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 4:60,618,334...60,618,414 JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr13:109,098,831...109,098,911
Ensembl chr13:109,098,827...109,098,916 		JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 7:102,021,543...102,021,629 JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 5:139,634,455...139,634,543 JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 9:33,253,682...33,253,765
Ensembl chr 9:33,253,682...33,253,765 		JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 7:102,025,345...102,025,426 JBrowse link
G Mir323 microRNA 323 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,546,944...134,547,029
Ensembl chr 6:134,546,944...134,547,029 		JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (PMID:18762567), (PMID:21247879) RGD PMID:18762567 PMID:21247879 NCBI chr 6:133,329,655...133,329,753
Ensembl chr 6:133,329,655...133,329,753 		JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:133,518,403...133,518,498
Ensembl chr 6:133,518,403...133,518,498 		JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,562,381...134,562,441 JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr16:60,743,764...60,743,837
Ensembl chr16:60,743,764...60,743,837 		JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,579,185...134,579,261 JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:118,143,084...118,143,166
Ensembl chr 8:118,143,084...118,143,166 		JBrowse link
G Mir431 microRNA 431 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,326,449...134,326,562
Ensembl chr 6:134,326,449...134,326,562 		JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,327,358...134,327,450
Ensembl chr 6:134,327,351...134,327,456 		JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr10:1,394,905...1,394,981 JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 6:134,550,115...134,550,197
Ensembl chr 6:134,550,114...134,550,198 		JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr  X:17,930,647...17,930,726
Ensembl chr  X:17,930,637...17,930,728 		JBrowse link
G Mir598 microRNA 598 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr15:42,138,609...42,138,687
Ensembl chr15:42,138,609...42,138,688 		JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO MGI:3619437 (PMID:21247879) RGD PMID:21247879 NCBI chr17:6,278,692...6,278,788
Ensembl chr17:6,278,692...6,278,788 		JBrowse link
G Mir9 microRNA 9 acts_upstream_of_or_within ISO (PMID:21247879) RGD PMID:21247879 NCBI chr 9:1,167,436...1,167,545
Ensembl chr 9:1,167,436...1,167,545 		JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (PMID:21609717) RGD PMID:21609717 NCBI chr  X:24,460,648...24,460,755
Ensembl chr  X:24,460,648...24,460,755 		JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (PMID:18762567) RGD PMID:18762567 NCBI chr 8:115,701,020...115,701,107
Ensembl chr 8:115,701,007...115,701,115 		JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:12,943,453...12,963,966
Ensembl chr 8:12,943,453...12,963,964 		JBrowse link
G Mmp8 matrix metallopeptidase 8 involved_in IMP
ISO
IEA 		PMID:25049354
(PMID:25049354)
GO_REF:0000107 		RGD
Ensembl		 PMID:25049354 PMID:25049354 GO_REF:0000107, RGD:13792525 NCBI chr 8:13,008,873...13,018,729
Ensembl chr 8:13,008,890...13,018,729 		JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:174,103,474...174,111,434
Ensembl chr 3:174,084,123...174,111,442 		JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO
IEA 		(PMID:22832163)
GO_REF:0000107 		RGD
Ensembl		 PMID:22832163 GO_REF:0000107 NCBI chr17:82,157,725...82,239,411
Ensembl chr17:82,157,705...82,239,410 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (PMID:17660297) RGD PMID:17660297 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:127,952,161...127,956,230 		JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:94,447,559...94,456,083
Ensembl chr 9:94,446,682...94,456,083 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within 		IDA
IEA
ISO 		GO_REF:0000117
GO_REF:0000107
(PMID:31786261)
(PMID:23776175) 		UniProt
Ensembl
RGD		 PMID:23776175 PMID:31786261 PMID:16842873 GO_REF:0000107 GO_REF:0000117, RGD:10045666 NCBI chr 2:226,689,745...226,805,897
Ensembl chr 2:226,689,745...226,783,088 		JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within 		IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:20060382) 		GO_Central
Ensembl
RGD		 PMID:20060382 GO_REF:0000033 GO_REF:0000107 NCBI chr 1:93,173,817...93,181,387
Ensembl chr 1:93,173,820...93,326,366 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO
IEA
ISS 		(PMID:20829348)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:20829348 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,595,319...3,610,295
Ensembl chr20:3,595,284...3,610,294 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO MGI:3525252 (PMID:27129283) RGD PMID:27129283 NCBI chr11:58,251,720...58,279,767
Ensembl chr11:58,251,721...58,279,767 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO
IEA 		(PMID:12483741), (PMID:28847925)
GO_REF:0000107
(PMID:28847925) 		RGD
Ensembl		 PMID:12483741 PMID:28847925 GO_REF:0000107 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,828,014...44,853,394 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO
IEA 		(PMID:27812135)
GO_REF:0000107 		RGD
Ensembl		 PMID:27812135 GO_REF:0000107 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846 		JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within 		IEP
IEA
ISO 		GO_REF:0000117
(PMID:18025219), (PMID:18791161) 		UniProt
RGD		 PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000117, RGD:5508737 NCBI chr10:64,313,335...64,349,221
Ensembl chr10:64,313,335...64,401,880 		JBrowse link
G Npdc1 neural proliferation, differentiation and control, 1 involved_in IEA GO_REF:0000117 UniProt GO_REF:0000117 NCBI chr 3:28,618,601...28,624,591 JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18511497) 		Ensembl
RGD		 PMID:18511497 GO_REF:0000107 NCBI chr10:84,224,599...84,231,812
Ensembl chr10:84,224,540...84,231,812 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA 		(PMID:18511497)
GO_REF:0000107
(PMID:21187453) 		RGD
Ensembl		 PMID:18511497 PMID:21187453 GO_REF:0000107 NCBI chr 3:97,614,616...97,632,053
Ensembl chr 3:97,614,616...97,624,532 		JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in IEA
ISO 		GO_REF:0000107
(PMID:18972444) 		Ensembl
RGD		 PMID:18972444 GO_REF:0000107 NCBI chr 7:25,733,471...25,829,440
Ensembl chr 7:25,733,471...25,829,389 		JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:43,997,446...44,041,716
Ensembl chr15:43,997,438...44,041,643 		JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:70,811,317...70,856,123
Ensembl chr  X:70,811,319...70,856,123 		JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:18,657,866...18,675,671
Ensembl chr 5:18,657,871...18,675,671 		JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:164,764,119...164,779,578
Ensembl chr 1:164,759,213...164,781,852 		JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 involved_in ISO (PMID:22844456) RGD PMID:22844456 NCBI chr15:32,337,955...32,342,700
Ensembl chr15:32,338,089...32,342,691 		JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:17911113) 		UniProt
Ensembl
RGD		 PMID:17911113 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:92,811,197...92,816,775
Ensembl chr 1:92,798,237...92,816,779 		JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:166,636,551...166,659,825
Ensembl chr 5:166,636,552...166,659,825 		JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:236,572,497...236,637,490
Ensembl chr 1:236,565,526...236,637,490 		JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO
IEA 		(PMID:19946272)
GO_REF:0000107 		RGD
Ensembl		 PMID:19946272 GO_REF:0000107 NCBI chr 1:262,912,659...262,949,581
Ensembl chr 1:262,926,656...262,950,189 		JBrowse link
G Pde2a phosphodiesterase 2A involved_in ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:165,235,623...165,327,466
Ensembl chr 1:165,235,623...165,327,466 		JBrowse link
G Pde4b phosphodiesterase 4B acts_upstream_of_or_within ISO
IEA 		MGI:2181444 (PMID:15585880)
GO_REF:0000107 		RGD
Ensembl		 PMID:15585880 GO_REF:0000107 NCBI chr 5:122,028,956...122,598,267
Ensembl chr 5:122,135,174...122,598,267 		JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:3525068 (PMID:15585880) RGD PMID:15585880 NCBI chr 2:41,748,337...43,262,567
Ensembl chr 2:42,110,838...43,262,569 		JBrowse link
G Pf4 platelet factor 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr14:17,582,477...17,583,392
Ensembl chr14:17,582,477...17,583,392 		JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISO
IEA
ISS 		(PMID:28007986)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:28007986 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:114,544,327...114,576,023
Ensembl chr 5:114,544,325...114,576,109 		JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,505,485...3,511,987
Ensembl chr15:3,505,487...3,512,030 		JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in ISO
IEA 		(PMID:17590392)
GO_REF:0000107 		RGD
Ensembl		 PMID:17590392 GO_REF:0000107 NCBI chr 8:101,662,512...101,684,474
Ensembl chr 8:101,664,056...101,684,614 		JBrowse link
G Plscr2 phospholipid scramblase 2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:101,689,202...101,725,726
Ensembl chr 8:101,689,210...101,725,757 		JBrowse link
G Plscr3 phospholipid scramblase 3 involved_in ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:55,064,349...55,070,120
Ensembl chr10:55,065,345...55,070,369 		JBrowse link
G Plscr4 phospholipid scramblase 4 involved_in ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:101,867,057...101,905,827
Ensembl chr 8:101,866,888...101,905,831 		JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:6,300,527...6,365,707
Ensembl chr20:6,352,183...6,365,707 		JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:63,073,505...63,729,215
Ensembl chr14:63,273,189...63,729,213 		JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent, 1E involved_in ISO
IEA 		(PMID:27793001)
GO_REF:0000107 		RGD
Ensembl		 PMID:27793001 GO_REF:0000107 NCBI chr10:72,548,906...72,684,702
Ensembl chr10:72,552,469...72,684,546 		JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:60,829,778...60,852,887
Ensembl chr10:60,829,778...60,852,887 		JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:249,264,985...249,409,966
Ensembl chr 2:249,264,985...249,409,846 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IEP RGD PMID:18769055 RGD:2300271 NCBI chr13:64,714,063...64,722,320
Ensembl chr13:64,713,619...64,722,320 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO
IEA 		(PMID:12486103)
GO_REF:0000107 		RGD
Ensembl		 PMID:12486103 GO_REF:0000107 NCBI chr 1:192,032,124...192,033,419
Ensembl chr 1:192,032,124...192,033,419 		JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO
IEA 		(PMID:19752193)
GO_REF:0000107 		RGD
Ensembl		 PMID:19752193 GO_REF:0000107 NCBI chr10:84,379,780...84,424,371
Ensembl chr10:84,389,622...84,425,160 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEP
IEA
ISO
IBA
IDA 		GO_REF:0000107
(PMID:20547752)
GO_REF:0000033
(PMID:25762865) 		Ensembl
RGD
GO_Central		 PMID:20547752 PMID:25762865 PMID:9918814 PMID:15728586 GO_REF:0000033 GO_REF:0000107, RGD:2298880, RGD:1580656 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO
IEA 		(PMID:19734146)
GO_REF:0000107 		RGD
Ensembl		 PMID:19734146 GO_REF:0000107 NCBI chr 8:117,870,548...117,904,303
Ensembl chr 8:117,870,270...117,904,302 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:2446070|MGI:2660793 (PMID:11894097), (PMID:11894098)
GO_REF:0000107 		RGD
Ensembl		 PMID:11894097 PMID:11894098 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663 		JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO
IEA 		(PMID:25903009)
GO_REF:0000107 		RGD
Ensembl		 PMID:25903009 GO_REF:0000107 NCBI chr 7:10,256,221...10,300,175
Ensembl chr 7:10,253,248...10,300,176 		JBrowse link
G Selenos selenoprotein S involved_in ISO
IEA 		(PMID:18675776)
GO_REF:0000107 		RGD
Ensembl		 PMID:18675776 GO_REF:0000107 NCBI chr 1:129,070,240...129,080,007
Ensembl chr 1:129,070,230...129,077,991 		JBrowse link
G Serpine1 serpin family E member 1 involved_in IEP
ISO
IEA 		(PMID:19916862)
GO_REF:0000107 		RGD
Ensembl		 PMID:19916862 PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:25,237,977...25,248,356
Ensembl chr12:25,237,952...25,248,357 		JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:239,409,991...239,681,195
Ensembl chr 1:239,409,991...239,505,774 		JBrowse link
G Shpk sedoheptulokinase involved_in ISO
IEA 		(PMID:22682222)
GO_REF:0000117
GO_REF:0000107 		RGD
UniProt
Ensembl		 PMID:22682222 GO_REF:0000107 GO_REF:0000117 NCBI chr10:58,316,065...58,340,489
Ensembl chr10:58,316,111...58,340,490 		JBrowse link
G Slc12a2 solute carrier family 12 member 2 involved_in ISO (PMID:31786261) RGD PMID:31786261 NCBI chr18:53,546,263...53,614,478
Ensembl chr18:53,546,333...53,614,470 		JBrowse link
G Slc7a5 solute carrier family 7 member 5 IEP RGD PMID:29687865 RGD:151357004 NCBI chr19:66,843,808...66,872,412
Ensembl chr19:66,843,808...66,872,412 		JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B involved_in IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:20,067,850...20,072,520
Ensembl chr14:20,067,851...20,072,527 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEP RGD PMID:21742974 RGD:151347181 NCBI chr10:5,389,574...5,391,265
Ensembl chr10:5,389,334...5,391,847 		JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO
IEA 		MGI:3026870 (PMID:14691481)
GO_REF:0000107 		RGD
Ensembl		 PMID:14691481 GO_REF:0000107 NCBI chr14:81,713,070...81,742,510
Ensembl chr14:81,731,188...81,742,609 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:166,511,616...166,559,463
Ensembl chr 3:166,511,985...166,559,462 		JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (PMID:19100238) RGD PMID:19100238 NCBI chr14:22,301,278...22,336,218
Ensembl chr14:22,236,616...22,342,652 		JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:72,969,824...72,974,447
Ensembl chr16:72,961,518...72,974,447 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO MGI:1861949 (PMID:21606371) RGD PMID:21606371 NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346 		JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:9,034,077...9,041,489
Ensembl chr 7:9,034,108...9,038,905 		JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:89,939,862...89,989,253
Ensembl chr 3:89,939,868...89,980,742 		JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693 Ensembl chr11:93,686,834...93,693,320 JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 involved_in ISO (PMID:17658277) RGD PMID:17658277 NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,172,963...1,196,892 		JBrowse link
G Ticam2 TIR domain containing adaptor molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184) 		RGD PMID:19412184 PMID:22685567 NCBI chr18:41,481,057...41,498,065
Ensembl chr18:41,478,539...41,512,243 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within 		IEP
IEA
ISO 		GO_REF:0000117
GO_REF:0000107
(PMID:20051628), (PMID:21880694), (PMID:28096568)
MGI:1860755 (PMID:10880523), (PMID:14691481), (PMID:24740015)
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456) 		UniProt
Ensembl
RGD		 PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:21880694 More... GO_REF:0000107 GO_REF:0000117, RGD:7777075 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007 		JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:97,166,430...97,190,642
Ensembl chr13:97,166,405...97,192,525 		JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757 PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:115,743,407...115,747,523
Ensembl chr 8:115,742,889...115,750,148 		JBrowse link
G Tnf tumor necrosis factor involved_in
acts_upstream_of_or_within 		IEP
IEA
ISO
IMP 		GO_REF:0000117
(PMID:29849090)
(PMID:19047410), (PMID:20060382), (PMID:21606371) 		UniProt
RGD		 PMID:19047410 PMID:20060382 PMID:21606371 PMID:29849090 PMID:15602748 More... GO_REF:0000117, RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO
IEA 		(PMID:19912257), (PMID:21127049), (PMID:21220427)
GO_REF:0000107 		RGD
Ensembl		 PMID:19912257 PMID:21127049 PMID:21220427 GO_REF:0000107 NCBI chr 1:15,528,921...15,543,993
Ensembl chr 1:15,528,921...15,543,979 		JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:162,356,250...162,387,411
Ensembl chr 5:162,353,848...162,387,411 		JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:76,256,654...76,280,133
Ensembl chr13:76,256,654...76,280,133 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr10:39,537,759...39,585,038
Ensembl chr10:39,537,437...39,585,158 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in IBA
IEA
ISO 		GO_REF:0000033
GO_REF:0000107
(PMID:16633345) 		GO_Central
Ensembl
RGD		 PMID:16633345 GO_REF:0000033 GO_REF:0000107 NCBI chr14:80,452,936...80,470,141
Ensembl chr14:80,452,845...80,470,992 		JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO
IBA 		(PMID:17088249)
GO_REF:0000033 		RGD
GO_Central		 PMID:17088249 GO_REF:0000033 NCBI chr 4:96,197,019...96,237,357
Ensembl chr 4:96,140,768...96,238,534 		JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328 		JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IEP RGD PMID:26383906 RGD:127284850 NCBI chr 9:20,259,227...20,276,879
Ensembl chr 9:20,261,408...20,276,892 		JBrowse link
G Trim41 tripartite motif-containing 41 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:33,676,348...33,687,432
Ensembl chr10:33,676,348...33,687,432 		JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:116,600,214...116,610,461
Ensembl chr 7:116,600,210...116,610,460 		JBrowse link
G Vim vimentin involved_in ISS
ISO 		GO_REF:0000024
(PMID:27812135) 		UniProt
RGD		 PMID:27812135 GO_REF:0000024 NCBI chr17:81,577,261...81,585,746
Ensembl chr17:81,568,272...81,585,746 		JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:234,239,769...234,272,150
Ensembl chr 1:234,240,121...234,272,154 		JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:160,042,900...160,177,757
Ensembl chr 4:160,047,982...160,177,757 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA 		(PMID:18174455)
GO_REF:0000107 		RGD
Ensembl		 PMID:18174455 GO_REF:0000107 NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,703,665...3,724,860 		JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA 		GO_REF:0000024
(PMID:12612580)
GO_REF:0000107
(PMID:11460154) 		UniProt
RGD
Ensembl		 PMID:11460154 PMID:12612580 GO_REF:0000024 GO_REF:0000107 NCBI chr14:84,604,623...84,609,707
Ensembl chr14:84,604,107...84,609,706 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
IEA
ISS 		(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
GO_REF:0000107
(PMID:19322177), (PMID:21616078), (PMID:26000482)
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 5:142,661,193...142,670,051
Ensembl chr 5:142,661,199...142,669,985 		JBrowse link
G Zfp36 zinc finger protein 36 involved_in ISO
IEA
ISS 		(PMID:14679154), (PMID:14766228), (PMID:15187101)
GO_REF:0000107
(PMID:10330172), (PMID:11533235), (PMID:22844456), (PMID:9703499)
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... GO_REF:0000024 GO_REF:0000107 NCBI chr 1:92,796,628...92,799,108
Ensembl chr 1:92,796,628...92,799,108 		JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:91,837,139...91,839,736
Ensembl chr 9:91,836,946...91,839,736 		JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within ISO (PMID:12594207) RGD PMID:12594207 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:2447190|MGI:3573941 (PMID:15690042), (PMID:16061696) RGD PMID:15690042 PMID:16061696 NCBI chr 4:18,209,088...18,302,142 JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:41,447,875...41,452,769
Ensembl chr15:41,447,875...41,452,769 		JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within ISO
IEA 		(PMID:12594207)
GO_REF:0000107 		RGD
Ensembl		 PMID:12594207 GO_REF:0000107 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA 		(PMID:26649771)
GO_REF:0000107 		RGD
Ensembl		 PMID:26649771 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO
IEA 		(PMID:26649771)
GO_REF:0000107 		RGD
Ensembl		 PMID:26649771 GO_REF:0000107 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:2660793 (PMID:11894098)
GO_REF:0000107 		RGD
Ensembl		 PMID:11894098 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663 		JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (PMID:15690042) RGD PMID:15690042 NCBI chr 8:41,789,557...41,805,903
Ensembl chr 8:41,791,878...41,796,312 		JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:26649771)
MGI:2674036 (PMID:15690042)
(PMID:12594207) 		RGD PMID:12594207 PMID:15690042 PMID:26649771 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
G Tlr4 toll-like receptor 4 acts_upstream_of_or_within ISO
IEA 		MGI:1860885 (PMID:10549626)
GO_REF:0000107 		RGD
Ensembl		 PMID:10549626 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779 		JBrowse link
cellular response to peptidoglycan term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:118,720,184...118,721,998
Ensembl chr 8:118,720,184...118,721,998 		JBrowse link
G Defb25 defensin beta 25 involved_in ISO (PMID:24955228) RGD PMID:24955228 NCBI chr 3:161,559,086...161,560,025
Ensembl chr 3:161,559,086...161,560,025 		JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO
IEA 		(PMID:22412986)
GO_REF:0000107 		RGD
Ensembl		 PMID:22412986 GO_REF:0000107 NCBI chr 4:59,092,914...59,104,596
Ensembl chr 4:59,081,357...59,112,552 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO
IEA 		(PMID:27374331)
GO_REF:0000107 		RGD
Ensembl		 PMID:27374331 GO_REF:0000107 NCBI chr10:44,826,299...44,853,373
Ensembl chr10:44,828,014...44,853,394 		JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 acts_upstream_of_or_within IEP
ISO 		MGI:2680581 (PMID:16949315) RGD PMID:16949315 PMID:24169446 RGD:13204728 NCBI chr19:34,555,832...34,596,281
Ensembl chr19:34,555,832...34,722,846 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO
IEA 		(PMID:24955228)
GO_REF:0000107 		RGD
Ensembl		 PMID:24955228 GO_REF:0000107 NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:2660793 (PMID:11894098)
GO_REF:0000107 		RGD
Ensembl		 PMID:11894098 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663 		JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO (PMID:16949315) RGD PMID:16949315 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (PMID:12847223) RGD PMID:12847223 NCBI chr 9:20,145,215...20,151,797
Ensembl chr 9:20,144,334...20,151,779 		JBrowse link
cellular response to triacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO
ISS 		(PMID:16880211)
GO_REF:0000024 		RGD
UniProt		 PMID:16880211 GO_REF:0000024 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Tlr1 toll-like receptor 1 involved_in
acts_upstream_of_or_within 		ISO
IBA
IEA 		(PMID:16880211)
(PMID:19931471)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:16880211 PMID:19931471 GO_REF:0000033 GO_REF:0000107 NCBI chr14:43,737,761...43,750,389
Ensembl chr14:43,740,379...43,756,243 		JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within 		ISO (PMID:16880211)
(PMID:19931471) 		RGD PMID:16880211 PMID:19931471 NCBI chr 2:171,499,189...171,504,831
Ensembl chr 2:171,497,060...171,520,194 		JBrowse link
lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:24740015)
GO_REF:0000107 		RGD
Ensembl		 PMID:24740015 GO_REF:0000107 NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610 		JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISO
IEA
ISS 		(PMID:16831874)
GO_REF:0000107
GO_REF:0000024 		RGD
Ensembl
UniProt		 PMID:16831874 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:237,501,181...237,510,821
Ensembl chr 2:237,501,134...237,511,829 		JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:167,329,513...167,356,217
Ensembl chr 3:167,329,530...167,356,396 		JBrowse link
G Cd14 CD14 molecule involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of ISO MGI:1321404|MGI:96824 (PMID:10880523) RGD PMID:10880523 NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982 		JBrowse link
G Cd6 Cd6 molecule involved_in ISO
IEA 		(PMID:17601777)
GO_REF:0000107 		RGD
Ensembl		 PMID:17601777 GO_REF:0000107 NCBI chr 1:216,867,767...216,906,642
Ensembl chr 1:216,867,771...216,879,432 		JBrowse link
G Gsk3a glycogen synthase kinase 3 alpha involved_in ISO (PMID:16537926) RGD PMID:16537926 NCBI chr 1:89,943,669...89,953,514
Ensembl chr 1:89,943,669...89,953,593 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in ISO (PMID:16537926) RGD PMID:16537926 NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249 		JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in
acts_upstream_of_or_within 		ISO
IBA
IEA 		(PMID:10383454)
GO_REF:0000033
GO_REF:0000117
GO_REF:0000107
(PMID:10549626), (PMID:12855817) 		RGD
GO_Central
UniProt
Ensembl		 PMID:10383454 PMID:10549626 PMID:12855817 GO_REF:0000033 GO_REF:0000107 GO_REF:0000117 NCBI chr  X:156,919,927...156,929,825
Ensembl chr  X:156,920,081...156,929,825 		JBrowse link
G Irak2 interleukin-1 receptor-associated kinase 2 acts_upstream_of_or_within
involved_in 		ISO
IBA
IEA 		(PMID:15082713)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:15082713 GO_REF:0000033 GO_REF:0000107 NCBI chr 4:148,341,704...148,398,211
Ensembl chr 4:148,341,719...148,398,210 		JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 involved_in ISO
IBA
IEA 		(PMID:18156187)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:18156187 GO_REF:0000033 GO_REF:0000107 NCBI chr 7:57,538,522...57,600,166
Ensembl chr 7:57,539,557...57,598,706 		JBrowse link
G Irak4 interleukin-1 receptor-associated kinase 4 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:127,561,777...127,588,762
Ensembl chr 7:127,561,717...127,597,109 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:12855817), (PMID:12872135) RGD PMID:12855817 PMID:12872135 NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:104,616,469...104,621,401 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO
IEA 		(PMID:10600756), (PMID:11536325)
GO_REF:0000107 		RGD
Ensembl		 PMID:10600756 PMID:11536325 GO_REF:0000107 NCBI chr 1:236,408,905...236,468,769
Ensembl chr 1:236,408,662...236,468,762 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO
IBA
IEA 		(PMID:11739189), (PMID:8409400)
GO_REF:0000033
GO_REF:0000107 		RGD
GO_Central
Ensembl		 PMID:8409400 PMID:11739189 GO_REF:0000033 GO_REF:0000107 NCBI chr 3:167,373,786...167,400,941
Ensembl chr 3:167,373,924...167,401,518 		JBrowse link
G LOC100360522 ribosomal protein P1-like acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr17:8,436,843...8,437,954 JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of ISO MGI:1194924|MGI:96824 (PMID:10880523) RGD PMID:10880523 NCBI chr17:27,621,313...27,705,336
Ensembl chr17:27,621,313...27,692,743 		JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of
involved_in 		ISO
IEA 		MGI:1194924|MGI:96824 (PMID:10880523)
GO_REF:0000117
(PMID:24380872) 		RGD
UniProt		 PMID:10880523 PMID:24380872 GO_REF:0000117 NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20385881) 		UniProt
Ensembl
RGD		 PMID:20385881 GO_REF:0000024 GO_REF:0000107 NCBI chr 5:21,437,127...21,553,097
Ensembl chr 5:21,437,084...21,554,461 		JBrowse link
G Malt1 MALT1 paracaspase involved_in ISO
IEA 		(PMID:16831874)
GO_REF:0000107 		RGD
Ensembl		 PMID:16831874 GO_REF:0000107 NCBI chr18:61,212,290...61,266,272
Ensembl chr18:61,212,317...61,266,272 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 acts_upstream_of_or_within ISO
IEA 		(PMID:12872135)
GO_REF:0000107 		RGD
Ensembl		 PMID:12872135 GO_REF:0000107 NCBI chr11:97,462,025...97,529,193
Ensembl chr11:97,462,025...97,527,825 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO
IEA 		(PMID:12872135)
GO_REF:0000107 		RGD
Ensembl		 PMID:12872135 GO_REF:0000107 NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO (PMID:12872135) RGD PMID:12872135 NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411 		JBrowse link
G Mtdh metadherin involved_in ISO
IEA 		(PMID:19740331)
GO_REF:0000107 		RGD
Ensembl		 PMID:19740331 GO_REF:0000107 NCBI chr 7:67,192,592...67,250,819
Ensembl chr 7:67,192,393...67,249,584 		JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor acts_upstream_of_or_within ISO
IEA 		MGI:2385681 (PMID:12855817)
GO_REF:0000107 		RGD
Ensembl		 PMID:12855817 GO_REF:0000107 NCBI chr 8:127,952,161...127,956,230
Ensembl chr 8:127,952,161...127,956,230 		JBrowse link
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within ISO (PMID:12872135), (PMID:18261938) RGD PMID:12872135 PMID:18261938 NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:78,593,847...78,597,072 		JBrowse link
G Nos3 nitric oxide synthase 3 acts_upstream_of_or_within ISO
IEA 		MGI:1857229 (PMID:15647265)
GO_REF:0000107 		RGD
Ensembl		 PMID:15647265 GO_REF:0000107 NCBI chr 4:11,686,088...11,706,604
Ensembl chr 4:11,686,268...11,706,664 		JBrowse link
G Nr2c2 nuclear receptor subfamily 2, group C, member 2 acts_upstream_of_or_within ISO MGI:1860755 (PMID:9851930) RGD PMID:9851930 NCBI chr 4:126,167,350...126,223,942
Ensembl chr 4:126,168,085...126,223,942 		JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (PMID:32514138) RGD PMID:32514138 NCBI chr19:62,456,196...62,592,684
Ensembl chr19:62,453,259...62,592,684 		JBrowse link
G Prkce protein kinase C, epsilon involved_in
acts_upstream_of_or_within 		ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:16757566)
MGI:3609215 (PMID:11696589) 		UniProt
Ensembl
RGD		 PMID:11696589 PMID:16757566 GO_REF:0000024 GO_REF:0000107 NCBI chr 6:13,718,050...14,204,931
Ensembl chr 6:13,718,050...14,204,288 		JBrowse link
G Ptafr platelet-activating factor receptor involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 5:150,049,322...150,079,060
Ensembl chr 5:150,049,460...150,079,408 		JBrowse link
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 involved_in ISO (PMID:23991106) RGD PMID:23991106 NCBI chr 2:194,055,165...194,103,209
Ensembl chr 2:194,045,746...194,103,209 		JBrowse link
G Pxn paxillin involved_in ISO (PMID:16537926) RGD PMID:16537926 NCBI chr12:46,721,546...46,768,706
Ensembl chr12:46,721,546...46,768,697 		JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO
IEA 		MGI:2660793 (PMID:11894098)
GO_REF:0000107 		RGD
Ensembl		 PMID:11894098 GO_REF:0000107 NCBI chr 5:34,428,573...34,459,808
Ensembl chr 5:34,428,573...34,459,663 		JBrowse link
G Rplp1 ribosomal protein lateral stalk subunit P1 acts_upstream_of_or_within IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:71,289,539...71,290,872
Ensembl chr 8:71,289,535...71,290,872 		JBrowse link
G Scarb1 scavenger receptor class B, member 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr12:36,957,302...37,023,982
Ensembl chr12:36,957,496...37,023,980 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO
IEA 		(PMID:30718772)
GO_REF:0000107 		RGD
Ensembl		 PMID:30718772 GO_REF:0000107 NCBI chr 3:97,529,509...97,548,204
Ensembl chr 3:97,527,572...97,549,540 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO (PMID:12872135) RGD PMID:12872135 NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346 		JBrowse link
G Ticam1 TIR domain containing adaptor molecule 1 acts_upstream_of_or_within ISO MGI:2679794|MGI:3029019 (PMID:12855817), (PMID:12872135) RGD PMID:12855817 PMID:12872135 NCBI chr 9:1,189,717...1,197,730
Ensembl chr 9:1,172,963...1,196,892 		JBrowse link
G Tifab TIFA inhibitor acts_upstream_of_or_within ISO MGI:108072|MGI:5911664 (PMID:26458771) RGD PMID:26458771 NCBI chr17:8,438,622...8,441,750
Ensembl chr17:8,433,862...8,444,360 		JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
NOT|acts_upstream_of_or_within 		IEA
ISO 		GO_REF:0000107
(PMID:28098138)
MGI:1194924|MGI:1321404|MGI:1341909 (PMID:10880523)
UniProtKB:O95711|UniProtKB:Q9Y6Y9 (PMID:10880523) 		Ensembl
RGD		 PMID:10880523 PMID:28098138 GO_REF:0000107 NCBI chr 5:85,161,247...85,174,882
Ensembl chr 5:85,161,192...85,175,007 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within 		IBA
ISO 		GO_REF:0000033
MGI:2385852 (PMID:26458771) 		GO_Central
RGD		 PMID:26458771 GO_REF:0000033 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328 		JBrowse link
negative regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cactin cactin, spliceosome C complex subunit involved_in ISO
IEA 		(PMID:20829348)
GO_REF:0000107 		RGD
Ensembl		 PMID:20829348 GO_REF:0000107 NCBI chr 7:9,042,125...9,047,807
Ensembl chr 7:9,042,129...9,047,558 		JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:33181266) RGD PMID:33181266 NCBI chr 3:161,503,090...161,504,507
Ensembl chr 3:161,503,090...161,504,507 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) RGD PMID:20345905 NCBI chr 8:119,878,344...119,901,189
Ensembl chr 8:119,878,344...119,901,189 		JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:20829348) 		UniProt
Ensembl
RGD		 PMID:20829348 GO_REF:0000024 GO_REF:0000107 NCBI chr20:3,595,319...3,610,295
Ensembl chr20:3,595,284...3,610,294 		JBrowse link
G Prdx2 peroxiredoxin 2 acts_upstream_of_or_within ISO MGI:2668456 (PMID:17325201) RGD PMID:17325201 NCBI chr19:40,085,788...40,091,083
Ensembl chr19:40,084,430...40,091,006 		JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 involved_in ISO
IEA 		UniProtKB:P97797 (PMID:17954568)
GO_REF:0000107 		RGD
Ensembl		 PMID:17954568 GO_REF:0000107 NCBI chr 4:159,212,320...159,237,069
Ensembl chr 4:159,212,320...159,237,069 		JBrowse link
G Sirpa signal-regulatory protein alpha involved_in ISO (PMID:17954568) RGD PMID:17954568 NCBI chr 3:137,272,932...137,311,279
Ensembl chr 3:137,273,042...137,311,279 		JBrowse link
G Trib1 tribbles pseudokinase 1 involved_in ISO
IEA 		(PMID:17452330)
GO_REF:0000107 		RGD
Ensembl		 PMID:17452330 GO_REF:0000107 NCBI chr 7:93,096,001...93,102,547
Ensembl chr 7:93,095,973...93,117,480 		JBrowse link
positive regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp6 bone morphogenetic protein 6 involved_in ISO
IEA 		(PMID:19252488)
GO_REF:0000107 		RGD
Ensembl		 PMID:19252488 GO_REF:0000107 NCBI chr17:26,523,704...26,785,558
Ensembl chr17:26,523,704...26,675,261 		JBrowse link
G Cd14 CD14 molecule involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:24380872) 		UniProt
Ensembl
RGD		 PMID:24380872 GO_REF:0000024 GO_REF:0000107 NCBI chr18:28,609,558...28,611,409
Ensembl chr18:28,608,883...28,611,292 		JBrowse link
G Cd180 CD180 molecule acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		UniProtKB:O95711 (PMID:10880523)
GO_REF:0000117
MGI:1321404|MGI:96824 (PMID:10880523)
GO_REF:0000033 		RGD
UniProt
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000117 NCBI chr 2:35,589,889...35,602,837
Ensembl chr 2:35,589,451...35,603,982 		JBrowse link
G Ly86 lymphocyte antigen 86 acts_upstream_of_or_within
involved_in 		ISO
IEA
IBA 		UniProtKB:Q99467 (PMID:10880523)
GO_REF:0000107
MGI:1194924|MGI:96824 (PMID:10880523)
GO_REF:0000033 		RGD
Ensembl
GO_Central		 PMID:10880523 GO_REF:0000033 GO_REF:0000107 NCBI chr17:27,621,313...27,705,336
Ensembl chr17:27,621,313...27,692,743 		JBrowse link
G Ly96 lymphocyte antigen 96 acts_upstream_of_or_within
involved_in 		ISO
IBA 		MGI:1194924|MGI:96824 (PMID:10880523)
GO_REF:0000033 		RGD
GO_Central		 PMID:10880523 GO_REF:0000033 NCBI chr 5:7,365,536...7,397,864
Ensembl chr 5:7,365,557...7,395,816 		JBrowse link
G Mif macrophage migration inhibitory factor involved_in ISO (PMID:11756671) RGD PMID:11756671 NCBI chr20:12,767,138...12,791,222
Ensembl chr 4:134,041,774...134,042,121
Ensembl chr20:134,041,774...134,042,121 		JBrowse link
G Prkca protein kinase C, alpha involved_in ISS
IEA
ISO 		GO_REF:0000024
GO_REF:0000107
(PMID:9830023) 		UniProt
Ensembl
RGD		 PMID:9830023 GO_REF:0000024 GO_REF:0000107 NCBI chr10:93,388,991...93,787,617
Ensembl chr10:93,388,991...93,787,572 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in IEA
ISO 		GO_REF:0000107
(PMID:17954568) 		Ensembl
RGD		 PMID:17954568 GO_REF:0000107 NCBI chr12:41,026,079...41,085,577
Ensembl chr12:41,043,785...41,085,577 		JBrowse link
G Sash1 SAM and SH3 domain containing 1 acts_upstream_of_or_within ISO
IEA 		(PMID:23776175)
GO_REF:0000107 		RGD
Ensembl		 PMID:23776175 GO_REF:0000107 NCBI chr 1:4,940,207...5,238,777
Ensembl chr 1:4,940,207...5,238,530 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in ISO (PMID:28098138) RGD PMID:28098138 NCBI chr10:56,006,243...56,026,357
Ensembl chr10:56,006,243...56,026,357 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:10215628) RGD PMID:10215628 NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328 		JBrowse link
regulation of lipopolysaccharide-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd55 CD55 molecule (Cromer blood group) involved_in ISO (PMID:12731067) RGD PMID:12731067 NCBI chr13:44,409,574...44,438,913
Ensembl chr13:44,409,587...44,438,107 		JBrowse link
G Cd84 CD84 molecule involved_in ISO (PMID:20628063) RGD PMID:20628063 NCBI chr13:86,859,979...86,899,984
Ensembl chr13:86,859,990...86,894,318 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in ISO
IEA 		(PMID:10652441)
GO_REF:0000107 		RGD
Ensembl		 PMID:10652441 GO_REF:0000107 NCBI chr19:10,233,326...10,244,856
Ensembl chr19:10,233,329...10,242,999 		JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:168,132,277...168,149,263
Ensembl chr 1:168,132,308...168,141,657 		JBrowse link
G Tut4 terminal uridylyl transferase 4 acts_upstream_of_or_within ISO (PMID:16643855) RGD PMID:16643855 NCBI chr 5:128,354,975...128,535,288
Ensembl chr 5:128,431,719...128,535,656 		JBrowse link
tolerance induction to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO
IEA 		(PMID:23609450)
GO_REF:0000107
GO_REF:0000117 		RGD
Ensembl
UniProt		 PMID:23609450 GO_REF:0000107 GO_REF:0000117 NCBI chr15:86,286,531...86,295,803
Ensembl chr15:86,286,579...86,295,687 		JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO
IEA 		(PMID:21220427)
GO_REF:0000107 		RGD
Ensembl		 PMID:21220427 GO_REF:0000107 NCBI chr 1:15,528,921...15,543,993
Ensembl chr 1:15,528,921...15,543,979 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20668
    response to stimulus 11201
      response to biotic stimulus 2012
        cellular response to biotic stimulus 383
          cellular response to molecule of bacterial origin 353
            cellular response to bacterial lipoprotein + 13
            cellular response to lipopolysaccharide + 333
            cellular response to lipoteichoic acid 12
            cellular response to peptidoglycan 9
Path 2
Term Annotations click to browse term
  biological_process 20668
    response to stimulus 11201
      response to external stimulus 2885
        response to external biotic stimulus 1965
          response to other organism 1961
            response to bacterium 1040
              response to molecule of bacterial origin 596
                cellular response to molecule of bacterial origin 353
                  cellular response to bacterial lipoprotein + 13
                  cellular response to lipopolysaccharide + 333
                  cellular response to lipoteichoic acid 12
                  cellular response to peptidoglycan 9
paths to the root