Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:terpenoid metabolic process
go back to main search page
Accession:GO:0006721 term browser browse the term
Definition:The chemical reactions and pathways involving terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure and including derivatives with various functional groups.
Synonyms:exact_synonym: terpenoid metabolism


show annotations for term's descendants           Sort by:
9-cis-retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:11876656)		 Ensembl
RGD		 PMID:11876656 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 IDA 9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal RGD PMID:8765131 RGD:2306683 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in ISO
ISS		 (PMID:11304534)
GO_REF:0000024		 RGD
UniProt		 PMID:11304534 GO_REF:0000024 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241 		JBrowse link
G Rdh9 retinol dehydrogenase 9 acts_upstream_of_or_within ISO (PMID:11876656) RGD PMID:11876656 NCBI chr 7:63,642,305...63,645,149 JBrowse link
9-cis-retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IDA RGD PMID:17167544 RGD:2306320 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
beta-carotene metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3767552 (PMID:25701869)		 Ensembl
RGD		 PMID:25701869 GO_REF:0000107 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
carotenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (MGI:4947204|PMID:21106934) RGD PMID:21106934 MGI:4947204 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
diterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Crh corticotropin releasing hormone IEP forskolin RGD PMID:21664419 RGD:5490546 NCBI chr 2:102,143,055...102,144,919
Ensembl chr 2:102,143,055...102,144,919 		JBrowse link
G Egfr epidermal growth factor receptor IEP taxanes RGD PMID:21448670 RGD:5131453 NCBI chr14:91,176,979...91,349,722
Ensembl chr14:91,177,067...91,344,382 		JBrowse link
G Hsd3b1 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 IEP forskolin RGD PMID:1312436 RGD:4889580 NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999 		JBrowse link
G Pgr progesterone receptor IEP forskolin, phorbol 12-myristate 13-acetate RGD PMID:8344215 RGD:1601291 NCBI chr 8:6,072,673...6,131,552
Ensembl chr 8:6,072,673...6,131,344 		JBrowse link
G Slc12a1 solute carrier family 12 member 1 IEP forskolin RGD PMID:19592485 RGD:7242914 NCBI chr 3:112,406,140...112,482,913
Ensembl chr 3:112,406,140...112,482,899 		JBrowse link
G Srd5a1 steroid 5 alpha-reductase 1 IEP forskolin RGD PMID:14997014 RGD:4891943 NCBI chr 1:33,686,069...33,720,468
Ensembl chr 1:33,686,391...33,720,461 		JBrowse link
G Star steroidogenic acute regulatory protein IEP forskolin RGD PMID:11064152 RGD:4145763 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672 		JBrowse link
farnesol catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21187079) RGD PMID:21187079 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
farnesyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:8188698 GO_REF:0000033 GO_REF:0000041, RGD:2316305 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
farnesyl diphosphate biosynthetic process, mevalonate pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 involved_in IEA
IBA		 GO_REF:0000002
GO_REF:0000033		 InterPro
GO_Central		 GO_REF:0000002 GO_REF:0000033 NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130 		JBrowse link
farnesyl diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp6 phospholipid phosphatase 6 involved_in ISO
ISS		 (PMID:20110354)
GO_REF:0000024		 RGD
UniProt		 PMID:20110354 GO_REF:0000024 NCBI chr 1:226,679,100...226,681,952
Ensembl chr 1:226,679,100...226,681,949 		JBrowse link
farnesyl diphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdft1 farnesyl diphosphate farnesyl transferase 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:16440058 GO_REF:0000033, RGD:1626611 NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287 		JBrowse link
geranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fdps farnesyl diphosphate synthase involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776 		JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
geranyl diphosphate metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp6 phospholipid phosphatase 6 involved_in ISO
ISS		 (PMID:20110354)
GO_REF:0000024		 RGD
UniProt		 PMID:20110354 GO_REF:0000024 NCBI chr 1:226,679,100...226,681,952
Ensembl chr 1:226,679,100...226,681,949 		JBrowse link
geranylgeranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220 		JBrowse link
geranylgeranyl diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp6 phospholipid phosphatase 6 involved_in ISO
ISS		 (PMID:20110354)
GO_REF:0000024		 RGD
UniProt		 PMID:20110354 GO_REF:0000024 NCBI chr 1:226,679,100...226,681,952
Ensembl chr 1:226,679,100...226,681,949 		JBrowse link
monoterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in ISO
IEA		 (PMID:16401082)
GO_REF:0000107		 RGD
Ensembl		 PMID:16401082 GO_REF:0000107 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp2c6 cytochrome P450, family 2, subfamily C, polypeptide 6 involved_in ISO (PMID:16401082) RGD PMID:16401082 NCBI chr 1:237,938,521...237,976,238
Ensembl chr 1:237,693,094...238,057,596 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO (PMID:16401082) RGD PMID:16401082 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Cyp2e1 cytochrome P450, family 2, subfamily e, polypeptide 1 involved_in ISO
IEA		 (PMID:16401082)
GO_REF:0000107		 RGD
Ensembl		 PMID:16401082 GO_REF:0000107 NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:16401082) RGD PMID:16401082 NCBI chr12:9,207,978...9,230,064
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
negative regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
G Prmt3 protein arginine methyltransferase 3 involved_in ISO
IEA
ISS		 (PMID:33495566)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:33495566 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435 		JBrowse link
pentacyclic triterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htra2 HtrA serine peptidase 2 IEP asiatic acid RGD PMID:22296759 RGD:5688365 NCBI chr 4:115,556,914...115,560,202
Ensembl chr 4:115,556,916...115,560,095 		JBrowse link
phytol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 involved_in ISO
IEA		 (PMID:15110319)
GO_REF:0000107		 RGD
Ensembl		 PMID:15110319 GO_REF:0000107 NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281 		JBrowse link
G Pecr peroxisomal trans-2-enoyl-CoA reductase involved_in ISO
IBA
IEA		 (PMID:16546181)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:16546181 GO_REF:0000033 GO_REF:0000107 NCBI chr 9:73,897,877...73,926,511
Ensembl chr 9:73,897,880...73,926,511 		JBrowse link
positive regulation of retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rdh10 retinol dehydrogenase 10 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh16 retinol dehydrogenase 16 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 7:63,616,711...63,625,053
Ensembl chr 7:63,597,536...63,624,124 		JBrowse link
regulation of vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dgat1 diacylglycerol O-acyltransferase 1 IMP RGD PMID:18000880 RGD:10400849 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Isx intestine-specific homeobox acts_upstream_of_or_within ISO MGI:3775943 (PMID:18093975) RGD PMID:18093975 NCBI chr19:13,217,637...13,239,754
Ensembl chr19:13,218,552...13,239,760 		JBrowse link
retinal metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca4 ATP binding cassette subfamily A member 4 involved_in ISO (PMID:29847635), (PMID:33375396) RGD PMID:29847635 PMID:33375396 NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 IDA RGD PMID:20709016 RGD:6903952 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Akr1c1 aldo-keto reductase family 1, member C1 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326 		JBrowse link
G Akr1c3 aldo-keto reductase family 1, member C3 involved_in ISO (PMID:21851338) RGD PMID:21851338 NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within ISO (PMID:12610736) RGD PMID:12610736 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in IEA
ISO		 GO_REF:0000107
(PMID:11585737)		 Ensembl
RGD		 PMID:11585737 GO_REF:0000107 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 involved_in ISO (PMID:11007799) RGD PMID:11007799 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA
ISS		 (PMID:11401432), (PMID:17951468), (PMID:24668807)
MGI:2177469 (PMID:25701869)
GO_REF:0000033
GO_REF:0000107
GO_REF:0000024
(MGI:3587559|PMID:15951442)		 RGD
GO_Central
Ensembl
UniProt		 PMID:11401432 PMID:15951442 PMID:17951468 PMID:24668807 PMID:25701869 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:3587559 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Bco2 beta-carotene oxygenase 2 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1926923 (PMID:25701869)		 GO_Central
RGD		 PMID:25701869 GO_REF:0000033 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5572883|PMID:15258110)
GO_REF:0000024
(PMID:15258110)		 Ensembl
RGD
UniProt		 PMID:15258110 GO_REF:0000024 GO_REF:0000107 MGI:5572883 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:12680773)		 GO_Central
RGD		 PMID:12680773 GO_REF:0000033 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
G Rbp4 retinol binding protein 4 acts_upstream_of_or_within ISO MGI:2445721 (PMID:11562477) RGD PMID:11562477 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in ISO (PMID:19458327) RGD PMID:19458327 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 acts_upstream_of_or_within ISO (PMID:12807874) RGD PMID:12807874 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in ISO
IBA		 (PMID:18039331)
GO_REF:0000033		 RGD
GO_Central		 PMID:18039331 GO_REF:0000033 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:21785167 GO_REF:0000033, RGD:6893661 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Rps13 ribosomal protein S13 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:170,572,925...170,575,355
Ensembl chr 1:170,572,921...170,575,355
Ensembl chr 3:170,572,921...170,575,355 		JBrowse link
G Rps13l1 ribosomal protein S13 like 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:56,457,121...56,457,669
Ensembl chr 5:56,457,124...56,457,669 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO
IBA		 (PMID:18926804), (PMID:19102727)
GO_REF:0000033		 RGD
GO_Central		 PMID:18926804 PMID:19102727 GO_REF:0000033 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970 		JBrowse link
retinoic acid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 IMP RGD PMID:21138835 RGD:6771354 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in IEP
ISO
ISS
IMP		 (PMID:29240402), (PMID:33565183)
GO_REF:0000024		 RGD
UniProt		 PMID:29240402 PMID:33565183 PMID:15950969 PMID:21138835 GO_REF:0000024, RGD:6771322, RGD:6771354 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 acts_upstream_of_or_within
involved_in		 IEP
ISO
ISS
IEA
IMP		 (PMID:11013254), (PMID:11044606), (PMID:16241904)
(MGI:3042765|PMID:14623956)
(PMID:27759097)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:11013254 PMID:11044606 PMID:14623956 PMID:16241904 PMID:27759097 More... GO_REF:0000024 GO_REF:0000107 MGI:3042765, RGD:6771322, RGD:6771354 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 IEP
IDA		 RGD PMID:15950969 PMID:21138835 RGD:6771322, RGD:6771354 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241 		JBrowse link
G Rbp1 retinol binding protein 1 IEP RGD PMID:15950969 RGD:6771322 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
G Rdh10 retinol dehydrogenase 10 acts_upstream_of_or_within ISO (PMID:17473173) RGD PMID:17473173 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
retinoic acid catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 involved_in ISO (PMID:10823918)
(PMID:9250660)		 RGD PMID:9250660 PMID:10823918 NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in IMP
ISO		 (PMID:10823918) RGD PMID:10823918 PMID:21138835 RGD:6771354 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Cyp26c1 cytochrome P450, family 26, subfamily C, polypeptide 1 involved_in ISO (PMID:14532297) RGD PMID:14532297 NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842 		JBrowse link
G Cyp2w1 cytochrome P450, family 2, subfamily w, polypeptide 1 involved_in ISO (PMID:26936974) RGD PMID:26936974 NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421 		JBrowse link
retinoic acid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2180099|MGI:2180100|MGI:97876 (PMID:10358022), (PMID:12851412), (PMID:15193143)		 GO_Central
RGD		 PMID:10358022 PMID:12851412 PMID:15193143 GO_REF:0000033 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534 		JBrowse link
G Adh6a alcohol dehydrogenase 6A (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in
acts_upstream_of_or_within		 IEA
ISO
IBA		 GO_REF:0000107
MGI:2180102 (PMID:10358022), (PMID:10402668)
GO_REF:0000033		 Ensembl
RGD
GO_Central		 PMID:10358022 PMID:10402668 GO_REF:0000033 GO_REF:0000107 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 acts_upstream_of_or_within ISO MGI:1861722|MGI:2667220|MGI:3609477 (PMID:10191271), (PMID:12808103), (PMID:12851412), (PMID:16207763) RGD PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 acts_upstream_of_or_within
involved_in		 TAS
ISO
IDA		 MGI:1857891|MGI:2180721 (PMID:14623241), (PMID:16368932), (PMID:8797830)
(PMID:33565183)		 RGD PMID:8797830 PMID:14623241 PMID:16368932 PMID:33565183 PMID:15205379 More... RGD:1576366, RGD:1576367 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in
acts_upstream_of_or_within		 ISO (PMID:11585737)
MGI:1353450|MGI:3043947|MGI:3512079 (PMID:16207763), (PMID:17207476)		 RGD PMID:11585737 PMID:16207763 PMID:17207476 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Aldh8a1 aldehyde dehydrogenase 8 family, member A1 involved_in ISO
IBA		 (PMID:11007799)
GO_REF:0000033		 RGD
GO_Central		 PMID:11007799 GO_REF:0000033 NCBI chr 1:16,183,940...16,203,385
Ensembl chr 1:16,183,940...16,203,385 		JBrowse link
G Crabp2 cellular retinoic acid binding protein 2 acts_upstream_of_or_within
involved_in		 NAS
ISO
IEA		 (PMID:9826179)
GO_REF:0000107		 RGD
Ensembl		 PMID:9826179 PMID:7750498 GO_REF:0000107, RGD:61557 NCBI chr 2:173,417,004...173,421,352
Ensembl chr 2:173,416,857...173,421,379 		JBrowse link
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:22020119), (PMID:9716180)
MGI:2183292 (PMID:15531370)
(MGI:1195386|PMID:9442090), (MGI:894533|PMID:9250660)		 RGD PMID:9250660 PMID:9442090 PMID:9716180 PMID:15531370 PMID:22020119 MGI:1195386 MGI:894533 NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204 		JBrowse link
G Cyp26b1 cytochrome P450, family 26, subfamily b, polypeptide 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:22020119)		 UniProt
RGD		 PMID:22020119 GO_REF:0000024 NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628 		JBrowse link
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 involved_in ISO (PMID:11093772) RGD PMID:11093772 NCBI chr 1:236,762,719...236,799,069
Ensembl chr 1:236,762,842...236,799,066 		JBrowse link
G Cyp2c79 cytochrome P450, family 2, subfamily c, polypeptide 79 involved_in ISO (PMID:11093772) RGD PMID:11093772
G Cyp2s1 cytochrome P450, family 2, subfamily s, polypeptide 1 involved_in ISO (PMID:12711469) RGD PMID:12711469 NCBI chr 1:81,309,948...81,325,303
Ensembl chr 1:81,310,451...81,325,303 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:11093772) RGD PMID:11093772 NCBI chr12:9,207,978...9,230,064
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
G Cyp3a9 cytochrome P450, family 3, subfamily a, polypeptide 9 involved_in ISO (PMID:11093772) RGD PMID:11093772 NCBI chr12:16,806,222...16,846,428
Ensembl chr12:16,806,207...16,846,422 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 NAS RGD PMID:12390888 RGD:633755 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within ISO MGI:2181412|MGI:87921 (PMID:15193143) RGD PMID:15193143 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
G Rdh16 retinol dehydrogenase 16 IDA RGD PMID:7499345 RGD:1299624 NCBI chr 7:63,616,711...63,625,053
Ensembl chr 7:63,597,536...63,624,124 		JBrowse link
G Scpep1 serine carboxypeptidase 1 IEP RGD PMID:11447226 RGD:70518 NCBI chr10:73,703,275...73,732,892
Ensembl chr10:73,703,278...73,732,850 		JBrowse link
retinoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide acts_upstream_of_or_within ISO MGI:2180100 (PMID:12027900) RGD PMID:12027900 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO (PMID:15369820) RGD PMID:15369820 NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide acts_upstream_of_or_within ISO MGI:2180101 (PMID:12027900) RGD PMID:12027900 NCBI chr 2:226,975,184...226,987,591
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide involved_in TAS
ISO		 (PMID:16787387), (PMID:9600267) RGD PMID:9600267 PMID:16787387 PMID:10829036 RGD:631904 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in ISO
ISS		 (PMID:12732097)
GO_REF:0000024		 RGD
UniProt		 PMID:12732097 GO_REF:0000024 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 involved_in ISO (PMID:12732097) RGD PMID:12732097 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in IDA PMID:7832787 UniProt PMID:7832787 RGD:11558002 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in ISO
IDA		 (PMID:11401432)
(MGI:1931377|PMID:11092891)
PMID:12468597		 RGD PMID:11092891 PMID:11401432 PMID:12468597 MGI:1931377, RGD:634627 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Bloc1s1 biogenesis of lysosomal organelles complex-1, subunit 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:1,347,495...1,351,103
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Ces1d carboxylesterase 1D involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1dl1 carboxylesterase 1D like 1 involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr19:22,560,685...22,592,355
Ensembl chr19:22,560,770...22,592,351 		JBrowse link
G Ces1e carboxylesterase 1E involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr19:13,833,154...13,869,627
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1f carboxylesterase 1F involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr19:13,796,623...13,822,113
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces2c carboxylesterase 2C involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790 		JBrowse link
G Ces2e carboxylesterase 2E involved_in TAS PMID:12230550 UniProt PMID:12230550 RGD:724430 NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 IDA RGD PMID:9606960 RGD:1625388 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5007106 (PMID:24005908)		 GO_Central
RGD		 PMID:24005908 GO_REF:0000033 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in ISO
ISS		 (PMID:12604222)
GO_REF:0000024		 RGD
UniProt		 PMID:12604222 GO_REF:0000024 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
G Lipa lipase A, lysosomal acid type acts_upstream_of_or_within ISO MGI:2451080 (PMID:27354281) RGD PMID:27354281 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:9204961) RGD PMID:9204961 NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556 		JBrowse link
G Rbp3 retinol binding protein 3 IC RGD PMID:8282025 RGD:6893658 NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (PMID:12226107) RGD PMID:12226107 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh5 retinol dehydrogenase 5 involved_in ISO
IBA		 (PMID:9931293)
GO_REF:0000033
(MGI:1350674|PMID:10588954)		 RGD
GO_Central		 PMID:9931293 PMID:10588954 GO_REF:0000033 MGI:1350674 NCBI chr 7:1,341,172...1,346,863
Ensembl chr 7:1,340,934...1,351,558 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO (PMID:25112876)
(PMID:16150724)		 RGD PMID:16150724 PMID:25112876 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
retinol metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:2180099|MGI:2180100|MGI:97876 (PMID:10358022), (PMID:12851412), (PMID:15193143)		 GO_Central
RGD		 PMID:10358022 PMID:12851412 PMID:15193143 GO_REF:0000033 NCBI chr 2:226,797,303...226,808,892
Ensembl chr 2:226,797,303...226,808,892 		JBrowse link
G Adh4 alcohol dehydrogenase 4 (class II), pi polypeptide involved_in ISO
ISS		 (PMID:16787387), (PMID:17279314)
GO_REF:0000024		 RGD
UniProt		 PMID:16787387 PMID:17279314 GO_REF:0000024 NCBI chr 2:226,948,717...226,966,747
Ensembl chr 2:226,947,466...226,987,591 		JBrowse link
G Adh6 alcohol dehydrogenase 6 (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,903,208...226,934,564
Ensembl chr 2:226,903,250...226,934,534 		JBrowse link
G Adh6a alcohol dehydrogenase 6A (class V) involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:226,823,775...226,846,005
Ensembl chr 2:226,823,730...226,846,003 		JBrowse link
G Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA		 MGI:2180102 (PMID:10358022), (PMID:10402668)
GO_REF:0000033
GO_REF:0000107		 RGD
GO_Central
Ensembl		 PMID:10358022 PMID:10402668 PMID:10829036 GO_REF:0000033 GO_REF:0000107, RGD:631904 NCBI chr 2:226,748,724...226,763,183
Ensembl chr 2:226,741,788...226,763,182 		JBrowse link
G Akr1b1 aldo-keto reductase family 1 member B1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157 		JBrowse link
G Akr1b10 aldo-keto reductase family 1 member B10 IDA RGD PMID:20709016 RGD:6903952 NCBI chr 4:63,038,459...63,060,336
Ensembl chr 4:63,040,169...63,053,852 		JBrowse link
G Aldh1a1 aldehyde dehydrogenase 1 family, member A1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000041
MGI:2667220 (PMID:12851412)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:12851412 GO_REF:0000041 GO_REF:0000107 NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961 		JBrowse link
G Aldh1a2 aldehyde dehydrogenase 1 family, member A2 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 8:71,877,850...71,957,107
Ensembl chr 8:71,877,850...71,957,107 		JBrowse link
G Aldh1a3 aldehyde dehydrogenase 1 family, member A3 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436 		JBrowse link
G Awat2 acyl-CoA wax alcohol acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:65,481,676...65,490,562
Ensembl chr  X:65,481,929...65,527,625 		JBrowse link
G Bco1 beta-carotene oxygenase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr19:45,149,250...45,186,102
Ensembl chr19:45,149,265...45,186,101 		JBrowse link
G Cel carboxyl ester lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 3:11,883,532...11,891,035
Ensembl chr 3:11,883,532...11,891,035 		JBrowse link
G Ces1d carboxylesterase 1D involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,873,490...13,912,035
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1dl1 carboxylesterase 1D like 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:22,560,685...22,592,355
Ensembl chr19:22,560,770...22,592,351 		JBrowse link
G Ces1e carboxylesterase 1E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,833,154...13,869,627
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces1f carboxylesterase 1F involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:13,796,623...13,822,113
Ensembl chr19:13,796,623...13,912,035 		JBrowse link
G Ces2a carboxylesterase 2A involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:129,428...136,480
Ensembl chr19:129,428...136,480 		JBrowse link
G Ces2c carboxylesterase 2C involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:260,391,190...260,398,757
Ensembl chr 1:260,388,902...260,398,790 		JBrowse link
G Ces2e carboxylesterase 2E involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr19:157,447...172,822
Ensembl chr19:157,407...172,856 		JBrowse link
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000041
(PMID:10681376)		 UniProt
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 NCBI chr 8:58,096,021...58,102,130
Ensembl chr 8:58,096,077...58,102,125 		JBrowse link
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 involved_in IEA
ISS
ISO		 GO_REF:0000041
GO_REF:0000024
(PMID:10681376)		 UniProt
RGD		 PMID:10681376 GO_REF:0000024 GO_REF:0000041 NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312 		JBrowse link
G Cyp1b1 cytochrome P450, family 1, subfamily b, polypeptide 1 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:5572883|PMID:15258110)
GO_REF:0000041
(PMID:10681376), (PMID:15258110)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:10681376 PMID:15258110 GO_REF:0000024 GO_REF:0000041 GO_REF:0000107 MGI:5572883 NCBI chr 6:15,342,312...15,350,886
Ensembl chr 6:15,342,344...15,350,917 		JBrowse link
G Cyp2d4 cytochrome P450, family 2, subfamily d, polypeptide 4 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr 7:113,882,584...113,891,754
Ensembl chr 7:113,881,618...113,891,759 		JBrowse link
G Cyp2j4 cytochrome P450, family 2, subfamily j, polypeptide 4 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794 		JBrowse link
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 involved_in ISO (PMID:10681376) RGD PMID:10681376 NCBI chr12:9,207,978...9,230,064
Ensembl chr12:9,015,383...9,285,008 		JBrowse link
G Dgat1 diacylglycerol O-acyltransferase 1 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299 		JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:153,454,078...153,484,432
Ensembl chr 1:153,454,080...153,484,428 		JBrowse link
G Dhrs4 dehydrogenase/reductase 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr15:28,966,544...28,978,135
Ensembl chr15:28,966,553...28,978,127 		JBrowse link
G Dhrs7 dehydrogenase/reductase 7 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 6:91,332,259...91,347,856
Ensembl chr 6:91,251,323...91,347,892 		JBrowse link
G Dhrs9 dehydrogenase/reductase 9 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:54,147,834...54,170,052
Ensembl chr 3:54,147,803...54,220,241 		JBrowse link
G Hsd17b6 hydroxysteroid (17-beta) dehydrogenase 6 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:422,466...442,008
Ensembl chr 7:422,480...442,425 		JBrowse link
G Lipe lipase E, hormone sensitive type involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:80,965,612...80,984,313
Ensembl chr 1:80,965,627...80,984,310 		JBrowse link
G Lrat lecithin retinol acyltransferase acts_upstream_of_or_within
involved_in		 IDA
ISO
IBA
IEA		 MGI:3038935|MGI:97879 (PMID:18093970)
GO_REF:0000033
(MGI:6414681|PMID:28758396)
(PMID:10819989)
GO_REF:0000041		 RGD
GO_Central
UniProt		 PMID:10819989 PMID:18093970 PMID:28758396 PMID:2253789 PMID:14642897 More... GO_REF:0000033 GO_REF:0000041 MGI:6414681, RGD:1599829, RGD:6484737, RGD:1599832, RGD:1599831 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Plb1 phospholipase B1 IDA RGD PMID:8117729 RGD:6903951 NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117 		JBrowse link
G Pnlip pancreatic lipase involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:257,774,012...257,811,656
Ensembl chr 1:257,798,581...257,811,654 		JBrowse link
G Pnpla2 patatin-like phospholipase domain containing 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:196,552,723...196,557,805
Ensembl chr 1:196,552,723...196,557,805 		JBrowse link
G Pnpla4 patatin like phospholipase domain containing 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:42,313,554...42,318,451
Ensembl chr  X:42,305,373...42,318,552 		JBrowse link
G Rbp1 retinol binding protein 1 acts_upstream_of_or_within IDA
ISO		 MGI:2181412|MGI:87921 (PMID:15193143), (PMID:15765518) RGD PMID:15193143 PMID:15765518 PMID:14642897 RGD:6484737 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
G Rbp2 retinol binding protein 2 TAS RGD PMID:3029082 RGD:729693 NCBI chr 8:99,079,293...99,104,489
Ensembl chr 8:99,079,104...99,104,473 		JBrowse link
G Rbp4 retinol binding protein 4 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (PMID:10232633)
MGI:1891259 (PMID:18093970)
GO_REF:0000107		 RGD
Ensembl		 PMID:10232633 PMID:18093970 GO_REF:0000107 NCBI chr 1:235,893,917...235,901,315
Ensembl chr 1:235,893,917...235,901,399 		JBrowse link
G Rdh10 retinol dehydrogenase 10 involved_in ISO
IEA		 (PMID:19458327)
GO_REF:0000041		 RGD
UniProt		 PMID:19458327 GO_REF:0000041 NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572 		JBrowse link
G Rdh11 retinol dehydrogenase 11 involved_in ISO (MGI:6189614|PMID:29567832) RGD PMID:29567832 MGI:6189614 NCBI chr 6:97,979,377...97,995,252
Ensembl chr 6:97,979,378...97,995,252 		JBrowse link
G Rdh12 retinol dehydrogenase 12 involved_in ISO (PMID:12226107)
(MGI:5442470|PMID:22621924)		 RGD PMID:12226107 PMID:22621924 MGI:5442470 NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388 		JBrowse link
G Rdh13 retinol dehydrogenase 13 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:69,373,014...69,401,454
Ensembl chr 1:69,373,113...69,400,908 		JBrowse link
G Rdh14 retinol dehydrogenase 14 involved_in
acts_upstream_of_or_within		 ISO (MGI:6271140|PMID:12226107)
(PMID:25533474)		 RGD PMID:12226107 PMID:25533474 MGI:6271140 NCBI chr 6:33,156,569...33,161,712
Ensembl chr 6:33,156,569...33,161,712 		JBrowse link
G Rdh16 retinol dehydrogenase 16 involved_in IDA
IBA
IEA		 GO_REF:0000033
GO_REF:0000041		 GO_Central
UniProt
RGD		 PMID:7499345 GO_REF:0000033 GO_REF:0000041, RGD:1299624 NCBI chr 7:63,616,711...63,625,053
Ensembl chr 7:63,597,536...63,624,124 		JBrowse link
G Rdh7 retinol dehydrogenase 7 involved_in IEA
IBA		 GO_REF:0000041
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000041 NCBI chr 7:63,676,016...63,689,375
Ensembl chr 7:63,675,579...63,689,392 		JBrowse link
G Rdh8 retinol dehydrogenase 8 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:15755727)		 GO_Central
RGD		 PMID:15755727 GO_REF:0000033 NCBI chr 8:19,353,191...19,360,462
Ensembl chr 8:19,353,191...19,360,462 		JBrowse link
G Retsat retinol saturase involved_in ISS
IBA
ISO
IEA		 PMID:15358783
GO_REF:0000033
(MGI:3522397|PMID:15358783)
GO_REF:0000107		 GO_Central
RGD
Ensembl		 PMID:15358783 PMID:15358783 GO_REF:0000033 GO_REF:0000107 MGI:3522397, RGD:8553455 NCBI chr 4:104,653,306...104,662,069
Ensembl chr 4:104,653,155...104,668,310 		JBrowse link
G Rpe65 retinoid isomerohydrolase RPE65 IDA RGD PMID:3603006 RGD:9585656 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
G Sdr16c5 short chain dehydrogenase/reductase family 16C, member 5 involved_in ISO
IBA		 (PMID:18926804), (PMID:19102727)
GO_REF:0000033		 RGD
GO_Central		 PMID:18926804 PMID:19102727 GO_REF:0000033 NCBI chr 5:17,018,813...17,043,974
Ensembl chr 5:17,018,813...17,040,970 		JBrowse link
G Sdr9c7 short chain dehydrogenase/reductase family 9C, member 7 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 7:63,703,788...63,720,325
Ensembl chr 7:63,707,071...63,721,480 		JBrowse link
sesquiterpenoid metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 involved_in ISO (PMID:18035827) RGD PMID:18035827 NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281 		JBrowse link
triterpenoid biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lss lanosterol synthase involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr20:12,091,138...12,118,858
Ensembl chr20:12,092,774...12,118,762 		JBrowse link
vitamin A metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipa lipase A, lysosomal acid type involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2451080 (PMID:27354281)		 Ensembl
RGD		 PMID:27354281 GO_REF:0000107 NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633 		JBrowse link
G Lrat lecithin retinol acyltransferase involved_in
acts_upstream_of_or_within		 ISO
IBA		 (MGI:6414681|PMID:28758396)
(PMID:11108736)
GO_REF:0000033		 RGD
GO_Central		 PMID:11108736 PMID:28758396 GO_REF:0000033 MGI:6414681 NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619 		JBrowse link
G Rbp1 retinol binding protein 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:15632377)		 UniProt
RGD		 PMID:15632377 GO_REF:0000024 NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743 		JBrowse link
xanthophyll catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 involved_in ISO (MGI:4947204|PMID:21106934) RGD PMID:21106934 MGI:4947204 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
xanthophyll metabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bco2 beta-carotene oxygenase 2 acts_upstream_of_or_within ISO MGI:4840382 (PMID:25701869) RGD PMID:25701869 NCBI chr 8:50,882,174...50,907,676
Ensembl chr 8:50,882,181...50,915,467 		JBrowse link
zeaxanthin biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpe65 retinoid isomerohydrolase RPE65 involved_in ISO
ISS
IBA		 (PMID:28874556)
GO_REF:0000024
GO_REF:0000033		 RGD
UniProt
GO_Central		 PMID:28874556 GO_REF:0000024 GO_REF:0000033 NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      cellular metabolic process 9554
        cellular lipid metabolic process 1074
          isoprenoid metabolic process 141
            terpenoid metabolic process 99
              4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process + 0
              GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolic process + 0
              diterpenoid metabolic process + 89
              farnesyl diphosphate metabolic process + 6
              geranyl diphosphate metabolic process + 3
              geranylgeranyl diphosphate metabolic process + 2
              monoterpenoid metabolic process + 5
              phytyl diphosphate metabolic process + 0
              polyterpenoid metabolic process + 0
              sesquiterpenoid metabolic process + 3
              terpenoid biosynthetic process + 19
              terpenoid catabolic process + 8
              tetraterpenoid metabolic process + 3
              triterpenoid metabolic process + 2
Path 2
Term Annotations click to browse term
  biological_process 19692
    metabolic process 11456
      primary metabolic process 10015
        lipid metabolic process 1453
          cellular lipid metabolic process 1074
            isoprenoid metabolic process 141
              terpenoid metabolic process 99
                4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process + 0
                GDP-alpha-D-mannosylchitobiosyldiphosphodolichol metabolic process + 0
                diterpenoid metabolic process + 89
                farnesyl diphosphate metabolic process + 6
                geranyl diphosphate metabolic process + 3
                geranylgeranyl diphosphate metabolic process + 2
                monoterpenoid metabolic process + 5
                phytyl diphosphate metabolic process + 0
                polyterpenoid metabolic process + 0
                sesquiterpenoid metabolic process + 3
                terpenoid biosynthetic process + 19
                terpenoid catabolic process + 8
                tetraterpenoid metabolic process + 3
                triterpenoid metabolic process + 2
paths to the root