Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:geranylgeranyl diphosphate metabolic process
go back to main search page
Accession:GO:0033385 term browser browse the term
Definition:The chemical reactions and pathways involving geranylgeranyl diphosphate, a polyprenol compound involved in the biosynthesis of a variety of terpenoids including chlorophylls, carotenoids, tocopherols, plastoquinones, and the plant hormones gibberellins.
Synonyms:exact_synonym: geranylgeranyl diphosphate metabolism;   geranylgeranyldiphosphate metabolic process



show annotations for term's descendants           Sort by:
 
geranylgeranyl diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ggps1 geranylgeranyl diphosphate synthase 1 involved_in IEA GO_REF:0000041 UniProt GO_REF:0000041 NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220
JBrowse link
geranylgeranyl diphosphate catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plpp6 phospholipid phosphatase 6 involved_in ISO
ISS
(PMID:20110354)
GO_REF:0000024
RGD
UniProt
PMID:20110354 GO_REF:0000024 NCBI chr 1:226,679,100...226,681,952
Ensembl chr 1:226,679,100...226,681,949
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20099
    cellular process 18695
      cellular metabolic process 10470
        cellular lipid metabolic process 1057
          phospholipid metabolic process 389
            geranylgeranyl diphosphate metabolic process 2
              geranylgeranyl diphosphate biosynthetic process 1
              geranylgeranyl diphosphate catabolic process 1
Path 2
Term Annotations click to browse term
  biological_process 20099
    metabolic process 12353
      primary metabolic process 11104
        lipid metabolic process 1446
          cellular lipid metabolic process 1057
            isoprenoid metabolic process 127
              terpenoid metabolic process 98
                geranylgeranyl diphosphate metabolic process 2
                  geranylgeranyl diphosphate biosynthetic process 1
                  geranylgeranyl diphosphate catabolic process 1
paths to the root