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Gene: Rps13 (ribosomal protein S13) Rattus norvegicus
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Symbol: Rps13
Name: ribosomal protein S13
Description: Exhibits 5.8S rRNA binding activity. Predicted to be involved in negative regulation of RNA splicing. Localizes to the cytosolic small ribosomal subunit and synapse. Orthologous to human RPS13 (ribosomal protein S13); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; INTERACTS WITH 2,4,6-trinitrotoluene; 2,4-dinitrotoluene; 2,6-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 40S ribosomal protein S13
Orthologs:
Homo sapiens (human) : RPS13 (ribosomal protein S13)  HGNC  Alliance
Mus musculus (house mouse) : Rps13 (ribosomal protein S13)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Rps13 (ribosomal protein S13)
Pan paniscus (bonobo/pygmy chimpanzee) : RPS13 (ribosomal protein S13)
Canis lupus familiaris (dog) : RPS13 (ribosomal protein S13)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Rps13 (ribosomal protein S13)
Sus scrofa (pig) : RPS13 (ribosomal protein S13)
more info ...
Related Pseudogenes: LOC100361313  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01185,328,902 - 185,331,332 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01192,299,622 - 192,302,052 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41174,425,813 - 174,428,243 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11174,565,061 - 174,567,484 (-)NCBI
Celera1168,394,210 - 168,396,640 (-)NCBICelera
Cytogenetic Map1q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Rps13
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621027
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-05-07
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.