ONTOLOGY REPORT - ANNOTATIONS |
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Term: | retinoic acid metabolic process |
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Accession: | GO:0042573
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browse the term
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Definition: | The chemical reactions and pathways involving retinoic acid, one of the three components that makes up vitamin A. |
Synonyms: | exact_synonym: | retinoic acid metabolism; vitamin A1 acid metabolic process; vitamin A1 acid metabolism |
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Adh1 |
alcohol dehydrogenase 1 (class I) |
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ISO IBA |
MGI:2180099|MGI:2180100|MGI:97876 (MGI:1338643|PMID:10358022), (MGI:2675573|PMID:12851412), (MGI:3510590|PMID:15193143) PMID:21873635 |
RGD |
PMID:10358022 PMID:12851412 PMID:15193143, PMID:21873635 |
MGI:1338643 MGI:2675573 MGI:3510590, RGD:13792537 |
NCBI chr 2:243,550,655...243,562,243
Ensembl chr 2:243,550,627...243,687,857
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Adh6 |
alcohol dehydrogenase 6 (class V) |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:243,656,568...243,687,857
Ensembl chr 2:243,550,627...243,687,857
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Adh6a |
alcohol dehydrogenase 6A (class V) |
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IBA |
PMID:21873635 |
GO_Central |
PMID:21873635 |
RGD:13792537 |
NCBI chr 2:243,577,086...243,599,357
Ensembl chr 2:243,577,082...243,599,400
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Adh7 |
alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide |
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IEA IBA ISO |
GO_REF:0000107 PMID:21873635 MGI:2180102 (MGI:1338643|PMID:10358022), (MGI:1340177|PMID:10402668) |
Ensembl RGD |
PMID:10358022 PMID:10402668, PMID:21873635 |
GO_REF:0000107 MGI:1338643 MGI:1340177, RGD:13792537 |
NCBI chr 2:243,500,540...243,516,865
Ensembl chr 2:243,502,073...243,516,532
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Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
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ISO |
MGI:1861722|MGI:2667220|MGI:3609477 (MGI:1336449|PMID:10191271), (MGI:2664447|PMID:12808103), (MGI:2675573|PMID:12851412), (MGI:3608158|PMID:16207763) |
RGD |
PMID:10191271 PMID:12808103 PMID:12851412 PMID:16207763 |
MGI:1336449 MGI:2664447 MGI:2675573 MGI:3608158 |
NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
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Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
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TAS ISO IDA |
MGI:1857891|MGI:2180721 (MGI:2681052|PMID:14623241), (MGI:3612223|PMID:16368932), (MGI:83148|PMID:8797830) |
RGD |
PMID:8797830 PMID:14623241 PMID:16368932, PMID:15205379, PMID:12547725 |
MGI:2681052 MGI:3612223 MGI:83148, RGD:1576366, RGD:1576367 |
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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Aldh1a3 |
aldehyde dehydrogenase 1 family, member A3 |
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ISO |
(PMID:11585737) MGI:1353450|MGI:3043947|MGI:3512079 (MGI:3608158|PMID:16207763), (MGI:3701419|PMID:17207476) |
RGD |
PMID:11585737 PMID:16207763 PMID:17207476 |
MGI:3608158 MGI:3701419 |
NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
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Aldh8a1 |
aldehyde dehydrogenase 8 family, member A1 |
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ISO |
(PMID:11007799) |
RGD |
PMID:11007799 |
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NCBI chr 1:16,910,043...16,929,465
Ensembl chr 1:16,910,069...16,930,481
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Crabp2 |
cellular retinoic acid binding protein 2 |
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NAS ISO |
(MGI:1313226|PMID:9826179) |
RGD |
PMID:9826179, PMID:7750498 |
MGI:1313226, RGD:61557 |
NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
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Cyp26a1 |
cytochrome P450, family 26, subfamily a, polypeptide 1 |
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ISO |
(PMID:22020119), (PMID:9716180) MGI:2183292 (MGI:1195386|PMID:9442090), (MGI:3522528|PMID:15531370), (MGI:894533|PMID:9250660) |
RGD |
PMID:9250660 PMID:9442090 PMID:9716180 PMID:15531370 PMID:22020119 |
MGI:1195386 MGI:3522528 MGI:894533 |
NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729
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Cyp26b1 |
cytochrome P450, family 26, subfamily b, polypeptide 1 |
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ISS ISO |
GO_REF:0000024 (PMID:22020119) |
UniProt RGD |
PMID:22020119 |
GO_REF:0000024 |
NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
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Cyp2c24 |
cytochrome P450, family 2, subfamily c, polypeptide 24 |
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ISO |
(PMID:11093772) |
RGD |
PMID:11093772 |
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NCBI chr 1:258,074,797...258,139,176
Ensembl chr 1:258,074,860...258,139,176
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Cyp2c79 |
cytochrome P450, family 2, subfamily c, polypeptide 79 |
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ISO |
(PMID:11093772) |
RGD |
PMID:11093772 |
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NCBI chr 1:147,236,480...147,307,988
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Cyp2s1 |
cytochrome P450, family 2, subfamily s, polypeptide 1 |
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ISO |
(PMID:12711469) |
RGD |
PMID:12711469 |
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NCBI chr 1:82,595,211...82,610,350
Ensembl chr 1:82,595,211...82,610,350
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Cyp3a62 |
cytochrome P450, family 3, subfamily a, polypeptide 62 |
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ISO |
(PMID:11093772) |
RGD |
PMID:11093772 |
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NCBI chr12:18,679,809...18,709,397
Ensembl chr12:18,678,594...18,709,397
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Cyp3a9 |
cytochrome P450, family 3, subfamily a, polypeptide 9 |
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ISO |
(PMID:11093772) |
RGD |
PMID:11093772 |
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NCBI chr12:19,074,288...19,114,491
Ensembl chr12:19,074,583...19,114,399
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Dhrs9 |
dehydrogenase/reductase 9 |
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NAS |
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RGD |
PMID:12390888 |
RGD:633755 |
NCBI chr 3:55,623,671...55,645,883
Ensembl chr 3:55,623,634...55,648,325
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Rbp1 |
retinol binding protein 1 |
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ISO |
MGI:2181412|MGI:87921 (MGI:3510590|PMID:15193143) |
RGD |
PMID:15193143 |
MGI:3510590 |
NCBI chr 8:106,449,321...106,470,842
Ensembl chr 8:106,449,321...106,470,842
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Rdh16 |
retinol dehydrogenase 16 |
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IDA |
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RGD |
PMID:7499345 |
RGD:1299624 |
NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
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Scpep1 |
serine carboxypeptidase 1 |
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IEP |
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RGD |
PMID:11447226 |
RGD:70518 |
NCBI chr10:76,230,371...76,263,866
Ensembl chr10:76,230,373...76,263,866
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Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
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IEA ISO |
GO_REF:0000107 (MGI:2662611|PMID:11876656) |
Ensembl RGD |
PMID:11876656 |
GO_REF:0000107 MGI:2662611 |
NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
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Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
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ISO |
(MGI:2662611|PMID:11876656) |
RGD |
PMID:11876656 |
MGI:2662611 |
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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Aldh8a1 |
aldehyde dehydrogenase 8 family, member A1 |
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ISO |
(MGI:2662611|PMID:11876656) |
RGD |
PMID:11876656 |
MGI:2662611 |
NCBI chr 1:16,910,043...16,929,465
Ensembl chr 1:16,910,069...16,930,481
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Cyp1a1 |
cytochrome P450, family 1, subfamily a, polypeptide 1 |
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IDA |
9-cis- and all-trans-retinoic acid synthesized from 9-cis- and all-trans-retinal |
RGD |
PMID:8765131 |
RGD:2306683 |
NCBI chr 8:62,472,087...62,478,122
Ensembl chr 8:62,472,095...62,478,147
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Dhrs9 |
dehydrogenase/reductase 9 |
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ISO ISS |
(PMID:11304534) GO_REF:0000024 |
RGD UniProt |
PMID:11304534 |
GO_REF:0000024 |
NCBI chr 3:55,623,671...55,645,883
Ensembl chr 3:55,623,634...55,648,325
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Rdh16 |
retinol dehydrogenase 16 |
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ISO |
(MGI:2662611|PMID:11876656) |
RGD |
PMID:11876656 |
MGI:2662611 |
NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
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Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
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IDA |
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RGD |
PMID:17167544 |
RGD:2306320 |
NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
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Akr1c3 |
aldo-keto reductase family 1, member C3 |
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ISO |
(PMID:21851338) |
RGD |
PMID:21851338 |
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NCBI chr17:69,761,126...69,778,021
Ensembl chr17:69,761,118...69,778,021
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Rdh10 |
retinol dehydrogenase 10 |
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IMP |
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RGD |
PMID:21138835 |
RGD:6771354 |
NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
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Rdh16 |
retinol dehydrogenase 16 |
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IMP |
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RGD |
PMID:21138835 |
RGD:6771354 |
NCBI chr 7:71,058,150...71,072,685
Ensembl chr 7:70,980,422...71,072,689
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Aldh1a1 |
aldehyde dehydrogenase 1 family, member A1 |
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IMP |
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RGD |
PMID:21138835 |
RGD:6771354 |
NCBI chr 1:238,222,689...238,264,381
Ensembl chr 1:238,222,521...238,264,330
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Aldh1a2 |
aldehyde dehydrogenase 1 family, member A2 |
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IEP ISO ISS IMP |
(PMID:29240402) GO_REF:0000024 |
RGD UniProt |
PMID:29240402, PMID:15950969, PMID:21138835 |
GO_REF:0000024, RGD:6771322, RGD:6771354 |
NCBI chr 8:77,640,234...77,719,488
Ensembl chr 8:77,640,222...77,719,489
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Aldh1a3 |
aldehyde dehydrogenase 1 family, member A3 |
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IEP ISO ISS IEA IMP |
(MGI:1927016|PMID:11044606), (MGI:3042765|PMID:14623956), (MGI:3055622|PMID:11013254), (MGI:3692370|PMID:16241904) GO_REF:0000024 (PMID:27759097) GO_REF:0000107 |
RGD UniProt Ensembl |
PMID:11013254 PMID:11044606 PMID:14623956 PMID:16241904 PMID:27759097, PMID:15950969, PMID:21138835 |
GO_REF:0000024 GO_REF:0000107 MGI:1927016 MGI:3042765 MGI:3055622 MGI:3692370, RGD:6771322, RGD:6771354 |
NCBI chr 1:127,302,920...127,337,828
Ensembl chr 1:127,301,128...127,337,882
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Crabp2 |
cellular retinoic acid binding protein 2 |
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IEP |
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RGD |
PMID:15950969 |
RGD:6771322 |
NCBI chr 2:187,322,416...187,326,794
Ensembl chr 2:184,882,969...184,883,505
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Dhrs9 |
dehydrogenase/reductase 9 |
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IEP IDA |
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RGD |
PMID:15950969, PMID:21138835 |
RGD:6771322, RGD:6771354 |
NCBI chr 3:55,623,671...55,645,883
Ensembl chr 3:55,623,634...55,648,325
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Rbp1 |
retinol binding protein 1 |
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IEP |
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RGD |
PMID:15950969 |
RGD:6771322 |
NCBI chr 8:106,449,321...106,470,842
Ensembl chr 8:106,449,321...106,470,842
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Rdh10 |
retinol dehydrogenase 10 |
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ISO |
(MGI:3709664|PMID:17473173) |
RGD |
PMID:17473173 |
MGI:3709664 |
NCBI chr 5:2,605,265...2,631,905
Ensembl chr 5:2,603,505...2,632,030
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Crabp1 |
cellular retinoic acid binding protein 1 |
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IEA |
GO_REF:0000002 |
InterPro |
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GO_REF:0000002 |
NCBI chr 8:59,344,097...59,352,135
Ensembl chr 8:59,344,083...59,352,132
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Cyp26a1 |
cytochrome P450, family 26, subfamily a, polypeptide 1 |
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ISO |
(PMID:10823918) (MGI:894533|PMID:9250660) |
RGD |
PMID:9250660 PMID:10823918 |
MGI:894533 |
NCBI chr 1:256,382,861...256,386,729
Ensembl chr 1:256,382,791...256,386,729
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Cyp26b1 |
cytochrome P450, family 26, subfamily b, polypeptide 1 |
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IMP ISO |
(PMID:10823918) |
RGD |
PMID:10823918, PMID:21138835 |
RGD:6771354 |
NCBI chr 4:116,261,796...116,278,615
Ensembl chr 4:116,261,796...116,278,615
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Cyp26c1 |
cytochrome P450, family 26, subfamily C, polypeptide 1 |
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ISO |
(PMID:14532297) |
RGD |
PMID:14532297 |
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NCBI chr 1:256,369,410...256,380,649
Ensembl chr 1:256,370,850...256,378,335
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Cyp2w1 |
cytochrome P450, family 2, subfamily w, polypeptide 1 |
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ISO |
(PMID:26936974) |
RGD |
PMID:26936974 |
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NCBI chr12:17,382,749...17,387,909
Ensembl chr12:17,383,159...17,387,879
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Term paths to the root
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