Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Pnpla2 (patatin-like phospholipase domain containing 2) Rattus norvegicus
Analyze
Symbol: Pnpla2
Name: patatin-like phospholipase domain containing 2
Description: Predicted to have retinyl-palmitate esterase activity and triglyceride lipase activity. Predicted to be involved in several processes, including acylglycerol metabolic process; negative regulation of sequestering of triglyceride; and positive regulation of triglyceride catabolic process. Predicted to localize to several cellular components, including cytosol; lipid droplet; and nucleoplasm. Orthologous to human PNPLA2 (patatin like phospholipase domain containing 2); INTERACTS WITH (+)-catechin; (-)-cotinine; (S)-nicotine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: adipose triglyceride lipase; LOC361676; patatin-like phospholipase domain-containing protein 2; RGD1309044; similar to RIKEN cDNA 0610039C21
Orthologs:
Homo sapiens (human) : PNPLA2 (patatin like phospholipase domain containing 2)  HGNC  Alliance
Mus musculus (house mouse) : Pnpla2 (patatin-like phospholipase domain containing 2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pnpla2 (patatin like phospholipase domain containing 2)
Pan paniscus (bonobo/pygmy chimpanzee) : PNPLA2 (patatin like phospholipase domain containing 2)
Canis lupus familiaris (dog) : PNPLA2 (patatin like phospholipase domain containing 2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pnpla2 (patatin like phospholipase domain containing 2)
Sus scrofa (pig) : PNPLA2 (patatin like phospholipase domain containing 2)
Chlorocebus sabaeus (African green monkey) : PNPLA2 (patatin like phospholipase domain containing 2)
Heterocephalus glaber (naked mole-rat) : Pnpla2 (patatin like phospholipase domain containing 2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01214,434,638 - 214,439,720 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1214,434,626 - 214,439,720 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01220,914,961 - 220,920,043 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41201,641,939 - 201,647,021 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1194,186,305 - 194,191,301 (+)NCBICelera
Cytogenetic Map1q41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pnpla2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1309044
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2020-06-09
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.