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ONTOLOGY REPORT - ANNOTATIONS

Term:ossification
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Accession:GO:0001503 term browser browse the term
Definition:The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance.
Comment:Note that this term does not have a 'developmental process' parent because ossification isn't necessarily developmental, can also occur as part of bone remodeling. Instead use 'ossification involved in bone maturation ; GO:0043931'.
Synonyms:exact_synonym: bone biosynthesis;   bone formation;   osteogenesis
 xref: Wikipedia:Ossification


show annotations for term's descendants           Sort by:
ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acan aggrecan IEP RGD PMID:20047194 RGD:2315746 NCBI chr 1:132,981,582...133,044,416
Ensembl chr 1:132,981,582...133,043,627 		JBrowse link
G Acp5 acid phosphatase 5, tartrate resistant IEP RGD PMID:19403161 RGD:2315903 NCBI chr 8:20,663,984...20,670,604
Ensembl chr 8:20,663,985...20,667,929 		JBrowse link
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346 (PMID:29618652) RGD PMID:29618652 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G Ahsg alpha-2-HS-glycoprotein acts_upstream_of_or_within ISO (PMID:8695840) RGD PMID:8695840 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999 		JBrowse link
G Alox15 arachidonate 15-lipoxygenase involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:1857428 (PMID:14716014)		 UniProt
RGD		 PMID:14716014 GO_REF:0000024 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874 		JBrowse link
G Ankrd11 ankyrin repeat domain containing 11 acts_upstream_of_or_within ISO (PMID:33996804) RGD PMID:33996804 NCBI chr19:50,940,284...51,098,962
Ensembl chr19:50,940,299...51,098,962 		JBrowse link
G Atp6v0a4 ATPase H+ transporting V0 subunit a4 involved_in ISO (PMID:10973252) RGD PMID:10973252 NCBI chr 4:66,760,163...66,842,126
Ensembl chr 4:66,760,159...66,842,110 		JBrowse link
G Atp6v1b1 ATPase H+ transporting V1 subunit B1 involved_in ISO
ISS		 (PMID:16433694)
GO_REF:0000024		 RGD
UniProt		 PMID:16433694 GO_REF:0000024 NCBI chr 4:116,223,799...116,242,475
Ensembl chr 4:116,223,799...116,242,475 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857430 (PMID:10193316)		 Ensembl
RGD		 PMID:10193316 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:3265336 RGD:1298707 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 IDA RGD PMID:16761078 RGD:7242406 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S NAS RGD PMID:7479909 RGD:634679 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318 		JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of ISO MGI:3527257 (PMID:12488435) RGD PMID:12488435 NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105 		JBrowse link
G Calcr calcitonin receptor involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:3038975 (PMID:14970190)		 Ensembl
RGD		 PMID:14970190 GO_REF:0000107 NCBI chr 4:31,661,270...31,736,392
Ensembl chr 4:31,661,273...31,736,392 		JBrowse link
G Casr calcium-sensing receptor IMP RGD PMID:15084499 RGD:1358486 NCBI chr11:64,235,251...64,304,811
Ensembl chr11:64,235,251...64,304,811 		JBrowse link
G Cbfb core-binding factor subunit beta acts_upstream_of_or_within ISO MGI:1934195|MGI:2447293 (PMID:12434155), (PMID:12434156) RGD PMID:12434155 PMID:12434156 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751 		JBrowse link
G Ccn2 cellular communication network factor 2 acts_upstream_of_or_within ISO MGI:2663631 (PMID:11237711), (PMID:12736220) RGD PMID:11237711 PMID:12736220 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Chrdl1 chordin-like 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:106,889,125...106,992,937
Ensembl chr  X:106,889,125...106,992,921 		JBrowse link
G Clec11a C-type lectin domain containing 11A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:94,800,456...94,809,002
Ensembl chr 1:94,801,496...94,804,633 		JBrowse link
G Clec3a C-type lectin domain family 3, member A involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr19:42,404,628...42,412,008
Ensembl chr19:42,404,628...42,412,008 		JBrowse link
G Clec3b C-type lectin domain family 3, member B involved_in ISO
IBA
IEP		 (PMID:7798325)
GO_REF:0000033
(MGI:5447635|PMID:7798325)		 RGD
GO_Central		 PMID:7798325 PMID:7798325 GO_REF:0000033 MGI:5447635, RGD:8554609 NCBI chr 8:122,810,120...122,815,837
Ensembl chr 8:122,810,149...122,815,835 		JBrowse link
G Col11a1 collagen type XI alpha 1 chain IEP RGD PMID:9822201 RGD:70694 NCBI chr 2:201,820,715...202,013,853
Ensembl chr 2:201,820,715...202,013,853 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in IEP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:14595530 GO_REF:0000033, RGD:1600917 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in ISO (MGI:86312|PMID:9119111) RGD PMID:9119111 MGI:86312 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Col5a2 collagen type V alpha 2 chain IEP RGD PMID:9822201 RGD:70694 NCBI chr 9:47,448,741...47,598,134
Ensembl chr 9:47,448,736...47,598,154 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:19248115), (PMID:22448243) RGD PMID:19248115 PMID:22448243 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Comp cartilage oligomeric matrix protein acts_upstream_of_or_within ISO (PMID:21350216), (PMID:27151399) RGD PMID:21350216 PMID:27151399 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Csf1 colony stimulating factor 1 IMP RGD PMID:12379742 RGD:628338 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704 		JBrowse link
G Dhx36 DEAH-box helicase 36 involved_in ISO (MGI:5559667|PMID:21590736) RGD PMID:21590736 MGI:5559667 NCBI chr 2:146,856,469...146,894,577
Ensembl chr 2:146,856,469...146,894,572 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:3526402 (PMID:21308776) RGD PMID:21308776 NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522 		JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323 		JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 involved_in ISO
ISS		 (PMID:12086964)
GO_REF:0000024		 RGD
UniProt		 PMID:12086964 GO_REF:0000024 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in
acts_upstream_of		 ISO MGI:3785162 (PMID:27959908)
MGI:1857079 (PMID:9662402)		 RGD PMID:9662402 PMID:27959908 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 involved_in ISO (PMID:7550340) RGD PMID:7550340 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Ext2 exostosin glycosyltransferase 2 involved_in ISO (PMID:9326317) RGD PMID:9326317 NCBI chr 3:79,665,414...79,798,077
Ensembl chr 3:79,665,415...79,798,059 		JBrowse link
G Fgf18 fibroblast growth factor 18 acts_upstream_of_or_within ISO MGI:2178751|MGI:2179607 (PMID:11937493), (PMID:11937494) RGD PMID:11937493 PMID:11937494 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818 		JBrowse link
G Fn1 fibronectin 1 TAS RGD PMID:15833739 RGD:1601193 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:3757560 (PMID:20837772) RGD PMID:20837772 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Foxc1 forkhead box C1 acts_upstream_of_or_within ISO MGI:1856705 (PMID:14512019) RGD PMID:14512019 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Foxc2 forkhead box C2 acts_upstream_of_or_within ISO MGI:1857865 (PMID:9106663) RGD PMID:9106663 NCBI chr19:49,186,034...49,188,736
Ensembl chr19:49,185,662...49,188,737 		JBrowse link
G Fstl3 follistatin like 3 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 7:9,923,574...9,929,223
Ensembl chr 7:9,923,576...9,939,639 		JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4943600|PMID:21402791)		 UniProt
RGD		 PMID:21402791 GO_REF:0000024 MGI:4943600 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
G Gfra4 GDNF family receptor alpha 4 acts_upstream_of ISO MGI:3625130 (PMID:16497798) RGD PMID:16497798 NCBI chr 3:118,254,937...118,262,252
Ensembl chr 3:118,255,402...118,258,329 		JBrowse link
G Gpld1 glycosylphosphatidylinositol specific phospholipase D1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3583476|PMID:15946906)		 UniProt
RGD		 PMID:15946906 GO_REF:0000024 MGI:3583476 NCBI chr17:40,084,427...40,132,035
Ensembl chr17:40,084,617...40,126,939 		JBrowse link
G Gpm6b glycoprotein m6b involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211 		JBrowse link
G Grp gastrin releasing peptide IMP RGD PMID:32192106 RGD:329961569 NCBI chr18:59,388,679...59,402,061
Ensembl chr18:59,388,274...59,402,061 		JBrowse link
G H4c14 H4 clustered histone 14 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:183,831,601...183,831,996
Ensembl chr 2:183,825,994...183,832,048 		JBrowse link
G Hist1h2ao histone cluster 1, H2ao involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:42,704,740...42,705,130
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr17:42,698,025...42,698,958
Ensembl chr 2:42,698,025...42,698,958
Ensembl chr 4:42,698,025...42,698,958 		JBrowse link
G Hist1h4b histone cluster 1 H4 family member B involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:42,480,467...42,484,912
Ensembl chr17:42,480,313...42,485,370 		JBrowse link
G Hist1h4m histone cluster 1, H4m involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:42,698,016...42,698,420
Ensembl chr17:42,698,025...42,698,958 		JBrowse link
G Ibsp integrin-binding sialoprotein involved_in TAS
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:11087753 GO_REF:0000002, RGD:62418 NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO (PMID:32227389) RGD PMID:32227389 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Igsf10 immunoglobulin superfamily, member 10 acts_upstream_of_or_within IDA PMID:14962803 MGI PMID:14962803 RGD:1302504 NCBI chr 2:143,575,710...143,605,044
Ensembl chr 2:143,576,070...143,604,773 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1934258 (PMID:11748145) RGD PMID:11748145 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G LOC125610325 histone H4 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043
G Ltf lactotransferrin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795 		JBrowse link
G Magmas-ps1 mitochondria-associated protein involved in granulocyte-macrophage colony-stimulating factor signal transduction, pseudogene 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr10:88,602,379...88,602,899 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within ISO (PMID:15820682) RGD PMID:15820682 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:2683274|MGI:3573783 (PMID:17927973) RGD PMID:17927973 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mesd mesoderm development LRP chaperone involved_in ISO (PMID:31564437) RGD PMID:31564437 NCBI chr 1:137,866,707...137,879,999
Ensembl chr 1:137,874,242...137,879,999 		JBrowse link
G Mgp matrix Gla protein involved_in IEP
IEA		 GO_REF:0000043 UniProt
RGD		 PMID:9718189 GO_REF:0000043, RGD:1582512 NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667 		JBrowse link
G Minpp1 multiple inositol-polyphosphate phosphatase 1 NOT|involved_in ISO (MGI:1888425|PMID:10938126) RGD PMID:10938126 MGI:1888425 NCBI chr 1:230,354,483...230,379,730
Ensembl chr 1:230,354,438...230,379,730 		JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710 		JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052 		JBrowse link
G Mir125b2 microRNA 125b-2 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir128-1 microRNA 128-1 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr13:39,699,449...39,699,530
Ensembl chr13:39,699,449...39,699,530 		JBrowse link
G Mir128-2 microRNA 128-2 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 8:112,085,467...112,085,550
Ensembl chr 8:112,085,467...112,085,550 		JBrowse link
G Mir130a microRNA 130a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 3:69,822,542...69,822,629
Ensembl chr 3:69,822,542...69,822,629 		JBrowse link
G Mir132 microRNA 132 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr10:60,023,696...60,023,796
Ensembl chr10:60,023,696...60,023,796 		JBrowse link
G Mir134 microRNA 134 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 6:128,748,908...128,748,980 JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675 		JBrowse link
G Mir15b microRNA 15b acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 2:153,245,200...153,245,297
Ensembl chr 2:153,245,200...153,245,297 		JBrowse link
G Mir16 microRNA 16 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443 		JBrowse link
G Mir183 microRNA 183 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 4:58,788,614...58,788,723
Ensembl chr 4:58,788,614...58,788,723 		JBrowse link
G Mir188 microRNA 188 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr  X:15,247,715...15,247,794
Ensembl chr  X:15,247,715...15,247,794 		JBrowse link
G Mir191 microRNA 191 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 8:109,264,098...109,264,188 JBrowse link
G Mir193b microRNA 193b acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr10:1,317,742...1,317,824
Ensembl chr10:1,317,742...1,317,824 		JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063 		JBrowse link
G Mir19b1 microRNA 19b-1 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr15:92,181,214...92,181,300
Ensembl chr15:92,181,214...92,181,300 		JBrowse link
G Mir19b2 microRNA 19b-2 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr  X:132,422,072...132,422,167
Ensembl chr  X:132,422,072...132,422,167 		JBrowse link
G Mir20a microRNA 20a acts_upstream_of_or_within ISO (PMID:25751060), (PMID:25959411) RGD PMID:25751060 PMID:25959411 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir211 microRNA 211 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 1:117,777,539...117,777,644
Ensembl chr 1:117,777,539...117,777,644 		JBrowse link
G Mir22 microRNA 22 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr10:60,307,039...60,307,133
Ensembl chr10:60,307,039...60,307,133 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr17:1,813,667...1,813,763
Ensembl chr17:1,813,667...1,813,763 		JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790 		JBrowse link
G Mir25 microRNA 25 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr12:17,042,932...17,043,015
Ensembl chr12:17,042,932...17,043,015 		JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917 		JBrowse link
G Mir296 microRNA 296 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 3:163,051,838...163,051,915
Ensembl chr 3:163,051,838...163,051,915 		JBrowse link
G Mir30a microRNA 30a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 9:25,737,600...25,737,670
Ensembl chr 9:25,737,600...25,737,670 		JBrowse link
G Mir31 microRNA 31 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 5:103,599,038...103,599,143 JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367 		JBrowse link
G Mir34a microRNA 34a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 5:160,533,002...160,533,103
Ensembl chr 5:160,533,002...160,533,103 		JBrowse link
G Mir34b microRNA 34b acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 8:51,410,244...51,410,327
Ensembl chr 8:51,410,244...51,410,327 		JBrowse link
G Mir34c microRNA 34c acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 8:51,409,726...51,409,802
Ensembl chr 8:51,409,726...51,409,802 		JBrowse link
G Mir370 microRNA 370 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 6:128,572,257...128,572,335
Ensembl chr 6:128,572,257...128,572,335 		JBrowse link
G Mir671 microRNA 671 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 4:10,580,747...10,580,827
Ensembl chr 4:10,580,738...10,580,835 		JBrowse link
G Mir877 microRNA 877 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr20:2,811,476...2,811,560
Ensembl chr20:2,811,476...2,811,560 		JBrowse link
G Mir99a microRNA 99a acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr11:16,200,443...16,200,523
Ensembl chr11:16,200,443...16,200,523 		JBrowse link
G Mirlet7b microRNA let-7b acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 7:116,804,186...116,804,270
Ensembl chr 7:116,804,186...116,804,270 		JBrowse link
G Mirlet7i microRNA let-7i acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr 7:58,642,485...58,642,569
Ensembl chr 7:58,642,480...58,642,571 		JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:15883642 RGD:1582555 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within IEP
ISO		 MGI:1276107 (PMID:18022611) RGD PMID:18022611 PMID:15883642 RGD:1582555 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mmp16 matrix metallopeptidase 16 acts_upstream_of_or_within ISO MGI:101900 (PMID:18022611) RGD PMID:18022611 NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388 		JBrowse link
G Mmp8 matrix metallopeptidase 8 IEP RGD PMID:15052653 RGD:1540385 NCBI chr 8:4,724,009...4,733,864
Ensembl chr 8:4,724,029...4,733,520 		JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:15883642 RGD:1582555 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within ISO MGI:1926381 (PMID:10742104) RGD PMID:10742104 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Myf5 myogenic factor 5 acts_upstream_of_or_within ISO MGI:1857219 (PMID:8587605) RGD PMID:8587605 NCBI chr 7:42,802,946...42,806,177
Ensembl chr 7:42,802,946...42,806,177 		JBrowse link
G Myog myogenin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:97252 (PMID:8587605)		 Ensembl
RGD		 PMID:8587605 GO_REF:0000107 NCBI chr13:45,745,455...45,748,044
Ensembl chr13:45,745,436...45,748,039 		JBrowse link
G Nog noggin IEP RGD PMID:24611347 RGD:10429074 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nppc natriuretic peptide C involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
G Ostn osteocrin involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr11:73,442,167...73,478,498
Ensembl chr11:73,442,487...73,468,603 		JBrowse link
G Pam16 presequence translocase associated motor 16 involved_in ISO (PMID:24786642) RGD PMID:24786642 NCBI chr10:10,942,534...10,950,654
Ensembl chr10:10,943,001...10,950,649 		JBrowse link
G Pdlim7 PDZ and LIM domain 7 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr17:9,124,565...9,139,814
Ensembl chr17:9,124,649...9,139,811 		JBrowse link
G Ppargc1b PPARG coactivator 1 beta involved_in ISO
IEA		 (MGI:3838421|PMID:19252502)
GO_REF:0000107		 RGD
Ensembl		 PMID:19252502 GO_REF:0000107 MGI:3838421 NCBI chr18:54,758,891...54,861,103
Ensembl chr18:54,758,902...54,861,194 		JBrowse link
G Pth parathyroid hormone TAS RGD PMID:11145578 RGD:61525 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Pth1r parathyroid hormone 1 receptor acts_upstream_of_or_within ISO MGI:3628795 (PMID:12194850) RGD PMID:12194850 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Ptn pleiotrophin acts_upstream_of_or_within ISO (PMID:12413943) RGD PMID:12413943 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Rassf2 Ras association domain family member 2 acts_upstream_of_or_within ISO MGI:5314787 (PMID:22227519) RGD PMID:22227519 NCBI chr 3:119,244,288...119,280,462
Ensembl chr 3:119,245,821...119,280,431 		JBrowse link
G Ripply2 ripply transcriptional repressor 2 acts_upstream_of_or_within ISO MGI:3513254 (PMID:17531978) RGD PMID:17531978 NCBI chr 8:87,974,444...87,979,002
Ensembl chr 8:87,974,776...87,978,969 		JBrowse link
G Rpl38 ribosomal protein L38 acts_upstream_of_or_within ISO MGI:1861228 (PMID:21062742) RGD PMID:21062742 NCBI chr10:99,701,330...99,705,004
Ensembl chr10:99,701,362...99,705,004
Ensembl chr14:99,701,362...99,705,004
Ensembl chr 3:99,701,362...99,705,004
Ensembl chr 2:99,701,362...99,705,004
Ensembl chr16:99,701,362...99,705,004 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IDA RGD PMID:10698968 RGD:631877 NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Runx1 RUNX family transcription factor 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:31,839,880...32,074,427
Ensembl chr11:31,843,764...32,074,542 		JBrowse link
G Runx3 RUNX family transcription factor 3 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 5:147,360,587...147,419,161
Ensembl chr 5:147,360,994...147,419,156 		JBrowse link
G Slc26a2 solute carrier family 26 member 2 IDA RGD PMID:9575183 RGD:730044 NCBI chr18:54,648,276...54,666,627
Ensembl chr18:54,652,951...54,666,626 		JBrowse link
G Slc34a1 solute carrier family 34 member 1 IEP RGD PMID:17310099 RGD:7243138 NCBI chr17:9,218,876...9,233,852
Ensembl chr17:9,218,876...9,233,852 		JBrowse link
G Smad1 SMAD family member 1 involved_in ISO RNAcentral:URS0000446722_9606 (PMID:25012146) RGD PMID:25012146 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad5 SMAD family member 5 IEP RGD PMID:11920662 RGD:724455 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within ISO MGI:2176256|MGI:2176264 (PMID:11748145) RGD PMID:11748145 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 acts_upstream_of_or_within ISO MGI:1856877 (PMID:16025116), (PMID:22910579) RGD PMID:16025116 PMID:22910579 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Sort1 sortilin 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr 2:195,924,033...196,002,354
Ensembl chr 2:195,924,099...196,002,354 		JBrowse link
G Sost sclerostin acts_upstream_of_or_within
involved_in		 IEP
ISO
IBA		 (PMID:14633986)
GO_REF:0000033		 RGD
GO_Central		 PMID:14633986 PMID:15199066 GO_REF:0000033, RGD:1599074 NCBI chr10:86,912,517...86,915,561
Ensembl chr10:86,911,517...86,915,561 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO (MGI:86312|PMID:9119111) RGD PMID:9119111 MGI:86312 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Sp1 Sp1 transcription factor acts_upstream_of_or_within ISO MGI:1277166 (PMID:17584888) RGD PMID:17584888 NCBI chr 7:133,541,302...133,571,961
Ensembl chr 7:133,541,491...133,571,961 		JBrowse link
G Sp3 Sp3 transcription factor acts_upstream_of_or_within ISO MGI:98372 (PMID:17584888) RGD PMID:17584888 NCBI chr 3:57,811,855...57,857,150
Ensembl chr 3:57,812,075...57,860,342 		JBrowse link
G Sparc secreted protein acidic and cysteine rich IEP RGD PMID:12365801 RGD:2300057 NCBI chr10:39,516,394...39,538,252
Ensembl chr10:39,516,406...39,538,396 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
G Stc1 stanniocalcin 1 IDA RGD PMID:12933688 RGD:737672 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264 		JBrowse link
G Suco SUN domain containing ossification factor involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr13:74,192,808...74,257,896
Ensembl chr13:74,193,573...74,257,896 		JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 IEP RGD PMID:24036726 RGD:10003162 NCBI chr12:15,396,378...15,441,277
Ensembl chr12:15,396,381...15,441,571 		JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 involved_in IEA GO_REF:0000043 UniProt GO_REF:0000043 NCBI chr14:66,873,467...66,919,737
Ensembl chr14:66,873,459...66,919,741 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (PMID:22087326) RGD PMID:22087326 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
G Thra thyroid hormone receptor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1860407|MGI:1860442 (PMID:9250685), (PMID:9927422)		 Ensembl
RGD		 PMID:9250685 PMID:9927422 GO_REF:0000107 NCBI chr10:83,701,885...83,729,408
Ensembl chr10:83,700,755...83,729,936 		JBrowse link
G Tmco1 transmembrane and coiled-coil domains 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr13:79,460,229...79,483,557
Ensembl chr13:79,460,135...79,483,555 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:27188440) RGD PMID:27188440 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
G Tnfrsf11a TNF receptor superfamily member 11A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1860238 (PMID:10500098)		 GO_Central
RGD		 PMID:10500098 GO_REF:0000033 NCBI chr13:21,928,370...21,986,719
Ensembl chr13:21,928,408...21,986,695 		JBrowse link
G Tnfsf11 TNF superfamily member 11 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1859962 (PMID:9950424)		 Ensembl
RGD		 PMID:9950424 GO_REF:0000107 NCBI chr15:53,673,850...53,705,325
Ensembl chr15:53,673,877...53,705,445 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1859953 (PMID:10215628)		 Ensembl
RGD		 PMID:10215628 GO_REF:0000107 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO MGI:2655736 (PMID:12665593) RGD PMID:12665593 NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479 		JBrowse link
bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alox15 arachidonate 15-lipoxygenase involved_in
acts_upstream_of_or_within		 ISS
ISO
IEA		 GO_REF:0000024
MGI:1857428 (PMID:14716014)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:14716014 GO_REF:0000024 GO_REF:0000107 NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874 		JBrowse link
G Alpl alkaline phosphatase, biomineralization associated involved_in ISS
ISO		 GO_REF:0000024
MGI:2183411|MGI:87983|MGI:97370 (MGI:2183534|PMID:10620060), (MGI:3033280|PMID:14982838), (MGI:5049900|PMID:20684022), (MGI:6827210|PMID:26457330), (MGI:6827471|PMID:11028439), (MGI:86401|PMID:9056646), (PMID:12082181), (PMID:15920156)		 UniProt
RGD		 PMID:9056646 PMID:10620060 PMID:11028439 PMID:12082181 PMID:14982838 More... GO_REF:0000024 MGI:2183534 MGI:3033280 MGI:5049900 MGI:6827210 MGI:6827471 MGI:86401 NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446 		JBrowse link
G Ankh ANKH inorganic pyrophosphate transport regulator involved_in IEA
ISO		 GO_REF:0000107
MGI:1856651|MGI:2385534 (PMID:12817751)		 Ensembl
RGD		 PMID:12817751 GO_REF:0000107 NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187 		JBrowse link
G Asgr2 asialoglycoprotein receptor 2 IEP RGD PMID:19841953 RGD:2316850 NCBI chr10:54,821,407...54,834,624
Ensembl chr10:54,821,438...54,834,617 		JBrowse link
G Aspn asporin involved_in ISO (PMID:19589127) RGD PMID:19589127 NCBI chr17:15,079,910...15,104,369
Ensembl chr17:15,080,639...15,104,041 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3040115|PMID:15109498)		 UniProt
RGD		 PMID:15109498 GO_REF:0000024 MGI:3040115 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3579503 (PMID:19623616)		 Ensembl
RGD		 PMID:19623616 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101948|MGI:1922667 (PMID:15657444), (PMID:19213727)		 Ensembl
RGD		 PMID:15657444 PMID:19213727 GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist involved_in ISO (PMID:19113921) RGD PMID:19113921 NCBI chr 5:97,306,427...97,309,783
Ensembl chr 5:97,306,431...97,309,783 		JBrowse link
G Clec3b C-type lectin domain family 3, member B involved_in ISO
IBA
ISS		 (PMID:7589422), (PMID:7798325)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:7589422 PMID:7798325 GO_REF:0000024 GO_REF:0000033 NCBI chr 8:122,810,120...122,815,837
Ensembl chr 8:122,810,149...122,815,835 		JBrowse link
G Col1a2 collagen type I alpha 2 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856327 (PMID:22910579)		 Ensembl
RGD		 PMID:22910579 GO_REF:0000107 NCBI chr 4:32,563,938...32,598,868
Ensembl chr 4:32,563,381...32,598,867 		JBrowse link
G Col6a1 collagen type VI alpha 1 chain acts_upstream_of_or_within ISO MGI:2153356 (PMID:19248115) RGD PMID:19248115 NCBI chr20:11,906,105...11,924,599
Ensembl chr20:11,905,957...11,924,597 		JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:27151399)		 Ensembl
RGD		 PMID:27151399 GO_REF:0000107 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Cst5 cystatin D involved_in ISO MGI:3629665 (PMID:16680148) RGD PMID:16680148 NCBI chr 3:137,573,194...137,577,754
Ensembl chr 3:137,573,194...137,577,754 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA		 (PMID:17023519)
GO_REF:0000107		 RGD
Ensembl		 PMID:17023519 GO_REF:0000107 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:3526402 (PMID:21308776) RGD PMID:21308776 NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522 		JBrowse link
G Duox2 dual oxidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3712359 (PMID:17440044)		 Ensembl
RGD		 PMID:17440044 GO_REF:0000107 NCBI chr 3:109,223,809...109,247,023
Ensembl chr 3:109,226,924...109,245,902 		JBrowse link
G Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 acts_upstream_of_or_within ISO MGI:2183829 (PMID:11997520) RGD PMID:11997520 NCBI chr 4:102,805,495...102,866,914
Ensembl chr 4:102,805,510...102,866,911 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in
acts_upstream_of		 ISO (PMID:28652107)
MGI:2385534 (PMID:21930712)
MGI:1856651|MGI:1857079|MGI:2183411|MGI:2385534|MGI:3785162|MGI:6402836|MGI:87983|MGI:97370 (PMID:12082181), (PMID:12817751), (PMID:15920156), (PMID:24770645), (PMID:25368121), (PMID:26763447), (PMID:31666661)		 RGD PMID:12082181 PMID:12817751 PMID:15920156 PMID:21930712 PMID:24770645 More... NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit acts_upstream_of_or_within ISO MGI:2183949 (PMID:17020410) RGD PMID:17020410 NCBI chr 1:79,033,342...79,047,102
Ensembl chr 1:79,033,326...79,047,102 		JBrowse link
G Fbxl15 F-box and leucine-rich repeat protein 15 involved_in IMP PMID:21572392 UniProt PMID:21572392 RGD:8554771 NCBI chr 1:245,189,732...245,191,973
Ensembl chr 1:245,189,736...245,192,007 		JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 acts_upstream_of_or_within ISO MGI:3044427 (PMID:12756187) RGD PMID:12756187 NCBI chr 1:184,745,418...184,850,655
Ensembl chr 1:184,745,420...184,850,626 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 involved_in ISO (MGI:4457789|PMID:20582225) RGD PMID:20582225 MGI:4457789 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase acts_upstream_of_or_within ISO MGI:3665439 (PMID:16964445) RGD PMID:16964445 NCBI chr 5:145,189,814...145,219,571
Ensembl chr 5:145,189,841...145,217,326 		JBrowse link
G Fkrp fukutin related protein acts_upstream_of_or_within ISO MGI:4834518 (PMID:27109613), (PMID:29571322) RGD PMID:27109613 PMID:29571322 NCBI chr 1:77,479,641...77,486,954
Ensembl chr 1:77,476,084...77,486,992 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15509771)		 Ensembl
RGD		 PMID:15509771 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of ISO MGI:2177586 (PMID:15005853) RGD PMID:15005853 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Gla galactosidase, alpha NOT|acts_upstream_of_or_within ISO MGI:1861794 (PMID:16697974) RGD PMID:16697974 NCBI chr  X:97,769,227...97,780,646
Ensembl chr  X:97,768,996...97,780,664 		JBrowse link
G Gpc3 glypican 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2159355 (PMID:15936336)		 Ensembl
RGD		 PMID:15936336 GO_REF:0000107 NCBI chr  X:131,868,986...132,236,824
Ensembl chr  X:131,868,990...132,236,798 		JBrowse link
G Gpnmb glycoprotein nmb IEP RGD PMID:11746512 RGD:632991 NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:1857719 (PMID:17181398)		 Ensembl
RGD		 PMID:17181398 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Ibsp integrin-binding sialoprotein involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:3796255 (PMID:25464126)		 GO_Central
RGD		 PMID:25464126 GO_REF:0000033 NCBI chr14:5,439,825...5,452,570
Ensembl chr14:5,439,829...5,452,693 		JBrowse link
G Icmt isoprenylcysteine carboxyl methyltransferase acts_upstream_of_or_within ISO MGI:1890508 (PMID:23686339) RGD PMID:23686339 NCBI chr 5:162,804,368...162,811,129
Ensembl chr 5:162,804,368...162,811,128 		JBrowse link
G Ifitm5 interferon induced transmembrane protein 5 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:24519609)
(PMID:18442316)
GO_REF:0000033
(MGI:5607401|PMID:20838829)		 RGD
GO_Central		 PMID:18442316 PMID:20838829 PMID:24519609 GO_REF:0000033 MGI:5607401 NCBI chr 1:196,045,836...196,052,554
Ensembl chr 1:196,045,666...196,047,232 		JBrowse link
G Klf10 KLF transcription factor 10 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3530069 (PMID:15657444)		 Ensembl
RGD		 PMID:15657444 GO_REF:0000107 NCBI chr 7:69,467,658...69,473,726
Ensembl chr 7:69,465,619...69,473,994 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4360132|PMID:19605502)		 UniProt
RGD		 PMID:19605502 GO_REF:0000024 MGI:4360132 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (PMID:19458888) RGD PMID:19458888 NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of ISO MGI:2180017 (PMID:11790802) RGD PMID:11790802 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975 		JBrowse link
G Mepe matrix extracellular phosphoglycoprotein acts_upstream_of ISO MGI:2448895 (PMID:12421822) RGD PMID:12421822 NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183 		JBrowse link
G Minpp1 multiple inositol-polyphosphate phosphatase 1 NOT|involved_in ISO (MGI:1888425|PMID:10938126) RGD PMID:10938126 MGI:1888425 NCBI chr 1:230,354,483...230,379,730
Ensembl chr 1:230,354,438...230,379,730 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3771509|PMID:17987127)		 Ensembl
RGD		 PMID:17987127 GO_REF:0000107 MGI:3771509 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Mtss1 MTSS I-BAR domain containing 1 acts_upstream_of_or_within ISO MGI:5319219 (PMID:21406566) RGD PMID:21406566 NCBI chr 7:90,488,751...90,628,007
Ensembl chr 7:90,488,754...90,627,968 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of ISO MGI:1857224 (PMID:15005853) RGD PMID:15005853 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028 (PMID:17353270) RGD PMID:17353270 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Phex phosphate regulating endopeptidase X-linked acts_upstream_of_or_within ISO MGI:1857312 (PMID:15843468) RGD PMID:15843468 NCBI chr  X:37,607,553...37,856,183
Ensembl chr  X:37,610,760...37,854,469 		JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 involved_in ISO (MGI:5049900|PMID:20684022), (MGI:6814708|PMID:17227223), (MGI:6827210|PMID:26457330) RGD PMID:17227223 PMID:20684022 PMID:26457330 MGI:5049900 MGI:6814708 MGI:6827210 NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic acts_upstream_of_or_within ISO MGI:5014347 (PMID:21553379) RGD PMID:21553379 NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556 		JBrowse link
G Prickle1 prickle planar cell polarity protein 1 involved_in IEA
ISO		 GO_REF:0000107
MGI:4941929 (PMID:23913870)		 Ensembl
RGD		 PMID:23913870 GO_REF:0000107 NCBI chr 7:124,639,142...124,735,027
Ensembl chr 7:124,639,142...124,658,113 		JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 acts_upstream_of_or_within IMP PMID:18519738 MGI PMID:18519738 RGD:8554572 NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188 		JBrowse link
G Pth parathyroid hormone acts_upstream_of ISO MGI:1889069|MGI:2665181 (PMID:19968565) RGD PMID:19968565 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154519 (PMID:11606467), (PMID:9832460)		 Ensembl
RGD		 PMID:9832460 PMID:11606467 GO_REF:0000107 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Pthlh parathyroid hormone-like hormone involved_in
acts_upstream_of
NOT|acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000002
MGI:1889069|MGI:2665181 (PMID:19968565)
MGI:2154515 (PMID:11606467)		 InterPro
RGD		 PMID:11606467 PMID:19968565 GO_REF:0000002 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847 		JBrowse link
G Ptn pleiotrophin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:12413943)		 Ensembl
RGD		 PMID:12413943 GO_REF:0000107 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Rogdi rogdi atypical leucine zipper acts_upstream_of_or_within ISO (PMID:38172607) RGD PMID:38172607 NCBI chr10:10,567,834...10,572,453
Ensembl chr10:10,567,834...10,572,452 		JBrowse link
G Ror2 receptor tyrosine kinase-like orphan receptor 2 IEP RGD PMID:23337931 RGD:11537369 NCBI chr17:11,972,830...12,148,152
Ensembl chr17:11,972,830...12,148,152 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:101948|MGI:88177 (PMID:19213727) RGD PMID:19213727 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:2385534 (PMID:21930712)		 Ensembl
RGD		 PMID:21930712 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sbds Sbds, ribosome maturation factor involved_in ISO (PMID:17920346) RGD PMID:17920346 NCBI chr12:26,420,410...26,429,650
Ensembl chr12:26,420,414...26,429,649 		JBrowse link
G Sbno2 strawberry notch homolog 2 acts_upstream_of_or_within ISO MGI:5551983 (PMID:23980096) RGD PMID:23980096 NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527 		JBrowse link
G Slc24a3 solute carrier family 24 member 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:6104227|PMID:28602864)
GO_REF:0000107		 RGD
Ensembl		 PMID:28602864 GO_REF:0000107 MGI:6104227 NCBI chr 3:132,552,119...133,051,192
Ensembl chr 3:132,551,595...133,051,192 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856877 (PMID:21788370), (PMID:24585429)		 Ensembl
RGD		 PMID:21788370 PMID:24585429 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of ISO MGI:2158693 (PMID:11371614) RGD PMID:11371614 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in ISO MGI:1856651|MGI:2385534 (PMID:12817751) RGD PMID:12817751 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
G Tcf7l2 transcription factor 7 like 2 acts_upstream_of_or_within ISO MGI:101948 (PMID:19213727) RGD PMID:19213727 NCBI chr 1:254,785,956...254,978,967
Ensembl chr 1:254,786,091...254,978,967 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (PMID:27188440) RGD PMID:27188440 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:88177 (PMID:19213727) RGD PMID:19213727 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:1888594 (PMID:23686339) RGD PMID:23686339 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano6 anoctamin 6 acts_upstream_of_or_within ISO MGI:4127698 (PMID:22936354) RGD PMID:22936354 NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of ISO MGI:3840841 (PMID:21490954) RGD PMID:21490954 NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477 		JBrowse link
G Ccdc154 coiled-coil domain containing 154 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5702426 (PMID:20121924)		 GO_Central
RGD		 PMID:20121924 GO_REF:0000033 NCBI chr10:14,177,271...14,187,378
Ensembl chr10:14,177,278...14,187,253 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079|MGI:2385534 (PMID:22359666), (PMID:25260930) RGD PMID:22359666 PMID:25260930 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3689350|MGI:5818514 (PMID:26996322) RGD PMID:26996322 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO
IEA		 (PMID:16433617)
GO_REF:0000107		 RGD
Ensembl		 PMID:16433617 GO_REF:0000107 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Lep leptin IDA RGD PMID:21353474 RGD:5128507 NCBI chr 4:57,661,127...57,675,262
Ensembl chr 4:57,661,131...57,675,262 		JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:5049904 (PMID:21272676)		 GO_Central
RGD		 PMID:21272676 GO_REF:0000033 NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342 		JBrowse link
G Snx10 sorting nexin 10 acts_upstream_of_or_within ISO MGI:5690193 (PMID:25811986) RGD PMID:25811986 NCBI chr 4:80,612,648...80,677,005
Ensembl chr 4:80,612,669...80,676,996 		JBrowse link
endochondral ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpl alkaline phosphatase, biomineralization associated acts_upstream_of_or_within ISO MGI:2183411 (PMID:20684022) RGD PMID:20684022 NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:4418577|PMID:20059955)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:20059955 GO_REF:0000024 GO_REF:0000107 MGI:4418577 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within ISO MGI:2136985 (PMID:9664685) RGD PMID:9664685 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 acts_upstream_of_or_within ISO MGI:3806990 (PMID:18539921) RGD PMID:18539921 NCBI chr 5:17,775,684...17,802,570
Ensembl chr 5:17,772,608...17,802,570 		JBrowse link
G Cbs cystathionine beta synthase acts_upstream_of_or_within ISO MGI:1857139 (PMID:15622513) RGD PMID:15622513 NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764 		JBrowse link
G Col10a1 collagen type X alpha 1 chain IMP RGD PMID:10853827 RGD:704421 NCBI chr20:38,183,103...38,189,488
Ensembl chr20:38,182,494...38,189,494 		JBrowse link
G Col13a1 collagen type XIII alpha 1 chain involved_in ISO (MGI:2157681|PMID:11470398) RGD PMID:11470398 MGI:2157681 NCBI chr20:29,783,965...29,924,116
Ensembl chr20:29,783,965...29,924,032 		JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:1856671 (PMID:8130375) RGD PMID:8130375 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Col2a1 collagen type II alpha 1 chain involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:10100048)		 Ensembl
RGD		 PMID:10100048 GO_REF:0000107 NCBI chr 7:129,098,489...129,127,560
Ensembl chr 7:129,098,786...129,127,546 		JBrowse link
G Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 acts_upstream_of_or_within ISO MGI:4947395 (PMID:21148564) RGD PMID:21148564 NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319 		JBrowse link
G Cst5 cystatin D involved_in ISO MGI:3629665 (PMID:16680148) RGD PMID:16680148 NCBI chr 3:137,573,194...137,577,754
Ensembl chr 3:137,573,194...137,577,754 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4413604|PMID:19956613)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:19956613 GO_REF:0000024 GO_REF:0000107 MGI:4413604 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:6402836 (PMID:24770645) RGD PMID:24770645 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:21185280), (PMID:23958822) RGD PMID:21185280 PMID:23958822 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2178751 (PMID:17014841)		 Ensembl
RGD		 PMID:17014841 GO_REF:0000107 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818 		JBrowse link
G Foxc1 forkhead box C1 involved_in ISO (MGI:5641778|PMID:25808752) RGD PMID:25808752 MGI:5641778 NCBI chr17:32,631,379...32,635,361
Ensembl chr17:32,633,142...32,634,803 		JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043361 (PMID:15797856)		 Ensembl
RGD		 PMID:15797856 GO_REF:0000107 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262 		JBrowse link
G Hspg2 heparan sulfate proteoglycan 2 acts_upstream_of_or_within ISO MGI:1934892 (PMID:10579729) RGD PMID:10579729 NCBI chr 5:149,677,437...149,778,594
Ensembl chr 5:149,677,476...149,778,594 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3665440|MGI:5818514 (PMID:26098911) RGD PMID:26098911 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 involved_in ISO
ISS
IEA		 (PMID:23273569)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:23273569 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:156,183,043...156,197,500
Ensembl chr 1:156,183,059...156,197,500 		JBrowse link
G Mef2c myocyte enhancer factor 2C acts_upstream_of_or_within ISO MGI:99533 (PMID:17336904) RGD PMID:17336904 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99458 (PMID:17336904)		 Ensembl
RGD		 PMID:17336904 GO_REF:0000107 NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457 		JBrowse link
G Mmp13 matrix metallopeptidase 13 involved_in IEP
ISO
IEA		 (MGI:3771509|PMID:17987127)
GO_REF:0000107		 RGD
Ensembl		 PMID:17987127 PMID:10646117 GO_REF:0000107 MGI:3771509, RGD:10043159 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Mmp14 matrix metallopeptidase 14 acts_upstream_of_or_within ISO MGI:1276107 (PMID:18022611) RGD PMID:18022611 NCBI chr15:27,887,795...27,897,020
Ensembl chr15:27,887,727...27,899,864 		JBrowse link
G Mmp16 matrix metallopeptidase 16 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:101900 (PMID:18022611)		 Ensembl
RGD		 PMID:18022611 GO_REF:0000107 NCBI chr 5:31,312,280...31,556,276
Ensembl chr 5:31,312,280...31,548,388 		JBrowse link
G Nab1 Ngfi-A binding protein 1 acts_upstream_of_or_within ISO MGI:107563 (PMID:16136673) RGD PMID:16136673 NCBI chr 9:49,053,579...49,093,078
Ensembl chr 9:49,053,758...49,092,098 		JBrowse link
G Nab2 Ngfi-A binding protein 2 acts_upstream_of_or_within ISO MGI:107564 (PMID:16136673) RGD PMID:16136673 NCBI chr 7:63,497,589...63,504,105
Ensembl chr 7:63,497,589...63,503,989 		JBrowse link
G Nfix nuclear factor I X involved_in ISO MGI:3714028 (PMID:17353270) RGD PMID:17353270 NCBI chr19:23,355,388...23,450,360
Ensembl chr19:23,355,498...23,448,265 		JBrowse link
G Npr2 natriuretic peptide receptor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:1856702|MGI:3522129|MGI:3774275 (PMID:15572448), (PMID:15722353), (PMID:17728275)		 Ensembl
RGD		 PMID:15572448 PMID:15722353 PMID:17728275 GO_REF:0000107 NCBI chr 5:57,883,171...57,901,590
Ensembl chr 5:57,883,171...57,901,580 		JBrowse link
G Pex7 peroxisomal biogenesis factor 7 acts_upstream_of_or_within ISO MGI:3052739 (PMID:12915479) RGD PMID:12915479 NCBI chr 1:14,582,698...14,646,686
Ensembl chr 1:14,582,699...14,646,748 		JBrowse link
G Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 acts_upstream_of_or_within ISO MGI:5049904 (PMID:20684022) RGD PMID:20684022 NCBI chr10:80,762,062...80,769,596
Ensembl chr10:80,760,792...80,770,342 		JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within ISO MGI:2154515 (PMID:8895385) RGD PMID:8895385 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176466 (PMID:10072783)		 Ensembl
RGD		 PMID:10072783 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Scx scleraxis bHLH transcription factor involved_in ISO (MGI:4418577|PMID:20059955) RGD PMID:20059955 MGI:4418577 NCBI chr 7:108,176,608...108,178,626
Ensembl chr 7:108,176,608...108,178,626 		JBrowse link
G Sik3 SIK family kinase 3 acts_upstream_of_or_within ISO MGI:5317918 (PMID:22318228) RGD PMID:22318228 NCBI chr 8:46,312,253...46,522,444
Ensembl chr 8:46,311,989...46,522,444 		JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1856877|MGI:3575405 (PMID:17591962), (PMID:21788370), (PMID:24505141)		 Ensembl
RGD		 PMID:17591962 PMID:21788370 PMID:24505141 GO_REF:0000107 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749 		JBrowse link
G Tek TEK receptor tyrosine kinase IEP RGD PMID:11735002 RGD:1601509 NCBI chr 5:109,607,077...109,733,805
Ensembl chr 5:109,607,077...109,733,804 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO (MGI:5543589|PMID:22416756) RGD PMID:22416756 MGI:5543589 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689 		JBrowse link
intramembranous ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3579503 (PMID:15790973)		 Ensembl
RGD		 PMID:15790973 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Col1a1 collagen type I alpha 1 chain acts_upstream_of_or_within ISO MGI:97009 (PMID:17440987) RGD PMID:17440987 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Ctsk cathepsin K IEP RGD PMID:16193234 RGD:1601024 NCBI chr 2:183,058,586...183,069,551
Ensembl chr 2:183,058,569...183,069,550 		JBrowse link
G Fgf18 fibroblast growth factor 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2178751 (PMID:17014841)		 Ensembl
RGD		 PMID:17014841 GO_REF:0000107 NCBI chr10:17,706,011...17,737,702
Ensembl chr10:17,706,174...17,736,818 		JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6478067|PMID:32460388)		 UniProt
Ensembl
RGD		 PMID:32460388 GO_REF:0000024 GO_REF:0000107 MGI:6478067 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Mmp2 matrix metallopeptidase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88467 (PMID:17440987)		 Ensembl
RGD		 PMID:17440987 GO_REF:0000107 NCBI chr19:14,154,657...14,182,870
Ensembl chr19:14,154,657...14,182,870 		JBrowse link
G Mn1 MN1 proto-oncogene, transcriptional regulator acts_upstream_of_or_within ISO MGI:3580381 (PMID:15870292) RGD PMID:15870292 NCBI chr12:45,181,794...45,220,959
Ensembl chr12:45,183,085...45,221,651 		JBrowse link
intratendonous ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mkx mohawk homeobox IMP RGD PMID:27370800 RGD:40924660 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124 		JBrowse link
ligamentous ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:1857079|MGI:2385534|MGI:3785162|MGI:6402836 (PMID:21935678), (PMID:22927960), (PMID:24770645), (PMID:25260930), (PMID:28798354), (PMID:32980560) RGD PMID:21935678 PMID:22927960 PMID:24770645 PMID:25260930 PMID:28798354 More... NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in IEA
ISO		 GO_REF:0000107
MGI:97370|MGI:99829 (PMID:22927960)		 Ensembl
RGD		 PMID:22927960 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
negative regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahsg alpha-2-HS-glycoprotein involved_in IMP
ISO
ISS		 (MGI:3687916|PMID:12556469)
GO_REF:0000024		 RGD
UniProt		 PMID:12556469 PMID:8702833 GO_REF:0000024 MGI:3687916, RGD:1626074 NCBI chr11:78,121,388...78,127,998
Ensembl chr11:78,117,918...78,145,999 		JBrowse link
G Bcor BCL6 co-repressor involved_in ISO (PMID:19578371) RGD PMID:19578371 NCBI chr  X:10,609,756...10,729,613
Ensembl chr  X:10,687,732...10,729,613 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISO (PMID:21403648) RGD PMID:21403648 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938 		JBrowse link
G Ccr1 C-C motif chemokine receptor 1 involved_in ISO (PMID:21403648) RGD PMID:21403648 NCBI chr 8:123,556,286...123,561,841 JBrowse link
G Ccr1l1 chemokine (C-C motif) receptor 1-like 1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 8:123,589,997...123,613,767
Ensembl chr 8:123,589,621...123,612,687 		JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in ISO
IEA
ISS		 (PMID:11165938)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:11165938 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5607146|PMID:25479107), (MGI:6220772|PMID:30111653), (MGI:6294341|PMID:22510396)		 UniProt
RGD		 PMID:22510396 PMID:25479107 PMID:30111653 GO_REF:0000024 MGI:5607146 MGI:6220772 MGI:6294341 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Fgf23 fibroblast growth factor 23 involved_in ISO (PMID:18282132) RGD PMID:18282132 NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821 		JBrowse link
G Gata1 GATA binding protein 1 acts_upstream_of_or_within ISO MGI:2177586 (PMID:15005853) RGD PMID:15005853 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1857719 (PMID:17181398)		 Ensembl
RGD		 PMID:17181398 GO_REF:0000107 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Ltbp3 latent transforming growth factor beta binding protein 3 acts_upstream_of_or_within ISO MGI:2180017 (PMID:11790802) RGD PMID:11790802 NCBI chr 1:203,029,412...203,045,975
Ensembl chr 1:203,029,877...203,045,975 		JBrowse link
G Mepe matrix extracellular phosphoglycoprotein acts_upstream_of_or_within ISO MGI:2448895 (PMID:12421822), (PMID:15843468), (PMID:22766095) RGD PMID:12421822 PMID:15843468 PMID:22766095 NCBI chr14:5,420,634...5,432,186
Ensembl chr14:5,420,635...5,432,183 		JBrowse link
G Nfe2 nuclear factor, erythroid 2 acts_upstream_of_or_within ISO MGI:1857224 (PMID:15005853) RGD PMID:15005853 NCBI chr 7:134,382,758...134,395,364
Ensembl chr 7:134,382,761...134,390,108 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta involved_in ISS
ISO		 GO_REF:0000024
(MGI:3713957|PMID:17537919)		 UniProt
RGD		 PMID:17537919 GO_REF:0000024 MGI:3713957 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Sox9 SRY-box transcription factor 9 acts_upstream_of_or_within ISO MGI:2158693 (PMID:11371614) RGD PMID:11371614 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Srgn serglycin involved_in ISO
IBA
ISS		 (PMID:16870619)
GO_REF:0000033
GO_REF:0000024		 RGD
GO_Central
UniProt		 PMID:16870619 GO_REF:0000024 GO_REF:0000033 NCBI chr20:30,442,810...30,479,549
Ensembl chr20:30,442,813...30,457,406 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
negative regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grem1 gremlin 1, DAN family BMP antagonist involved_in ISO (PMID:15539560) RGD PMID:15539560 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Pth parathyroid hormone involved_in IMP PMID:11604398 CAFA PMID:11604398 RGD:12793028 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Rflna refilin A involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1923816 (PMID:24436304)		 GO_Central
RGD		 PMID:24436304 GO_REF:0000033 NCBI chr12:31,633,360...31,642,313
Ensembl chr12:31,633,361...31,642,317 		JBrowse link
G Rflnb refilin B involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
MGI:1920371 (PMID:24436304)		 GO_Central
RGD		 PMID:24436304 GO_REF:0000033 NCBI chr10:60,893,693...60,899,970
Ensembl chr10:60,893,713...60,899,976 		JBrowse link
negative regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IMP RGD PMID:16177600 RGD:1598747 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Bcl2 BCL2, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:9008714)		 Ensembl
RGD		 PMID:9008714 GO_REF:0000107 NCBI chr13:22,689,783...22,853,920
Ensembl chr13:22,684,989...22,853,743
Ensembl chr13:22,684,989...22,853,743 		JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of_or_within ISO MGI:3527257 (PMID:12488435) RGD PMID:12488435 NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105 		JBrowse link
G Calcr calcitonin receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3038975 (PMID:14970190)		 Ensembl
RGD		 PMID:14970190 GO_REF:0000107 NCBI chr 4:31,661,270...31,736,392
Ensembl chr 4:31,661,273...31,736,392 		JBrowse link
G Chsy1 chondroitin sulfate synthase 1 involved_in ISO (PMID:21129727) RGD PMID:21129727 NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 IMP RGD PMID:32231239 RGD:32716373 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Dkk1 dickkopf WNT signaling pathway inhibitor 1 involved_in IMP
ISO		 (MGI:3803396|PMID:18505822) RGD PMID:18505822 PMID:21773994 MGI:3803396, RGD:6907379 NCBI chr 1:228,381,521...228,385,202
Ensembl chr 1:228,381,521...228,385,202 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 acts_upstream_of_or_within ISO MGI:1857079 (PMID:9662402) RGD PMID:9662402 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Gfra4 GDNF family receptor alpha 4 acts_upstream_of_or_within ISO MGI:3625130 (PMID:16497798) RGD PMID:16497798 NCBI chr 3:118,254,937...118,262,252
Ensembl chr 3:118,255,402...118,258,329 		JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha involved_in ISO (MGI:5300390|PMID:22081627) RGD PMID:22081627 MGI:5300390 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261 		JBrowse link
G Kremen1 kringle containing transmembrane protein 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3803396|PMID:18505822)		 Ensembl
RGD		 PMID:18505822 GO_REF:0000107 MGI:3803396 NCBI chr14:80,081,870...80,147,489
Ensembl chr14:80,084,403...80,147,516 		JBrowse link
G Kremen2 kringle containing transmembrane protein 2 involved_in ISO (MGI:3803396|PMID:18505822) RGD PMID:18505822 MGI:3803396 NCBI chr10:12,763,345...12,767,622
Ensembl chr10:12,763,397...12,767,854 		JBrowse link
G Lrp4 LDL receptor related protein 4 involved_in ISO (PMID:21471202) RGD PMID:21471202 NCBI chr 3:77,429,600...77,483,593
Ensembl chr 3:77,429,798...77,483,593 		JBrowse link
G Mdk midkine involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5780844|PMID:20200993)		 UniProt
Ensembl
RGD		 PMID:20200993 GO_REF:0000024 GO_REF:0000107 MGI:5780844 NCBI chr 3:77,901,134...77,903,997
Ensembl chr 3:77,901,158...77,903,130 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISO
IEA
ISS		 (PMID:17696759)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:17696759 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:31691506 RGD:151893486 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006 		JBrowse link
G Mkx mohawk homeobox IMP RGD PMID:27370800 RGD:40924660 NCBI chr17:55,077,073...55,156,877
Ensembl chr17:55,077,540...55,156,124 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:5437413|PMID:21493891) RGD PMID:21493891 MGI:5437413 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G P2ry2 purinergic receptor P2Y2 IDA RGD PMID:12210747 RGD:729594 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632 		JBrowse link
G Ptk2b protein tyrosine kinase 2 beta IMP RGD PMID:17537919 RGD:1642610 NCBI chr15:40,360,722...40,481,235
Ensembl chr15:40,360,723...40,481,282 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region involved_in ISO (MGI:5437413|PMID:21493891) RGD PMID:21493891 MGI:5437413 NCBI chr14:57,338,493...57,523,330
Ensembl chr14:57,338,507...57,523,353 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19254787)
(PMID:15677765), (PMID:19254787)		 Ensembl
RGD		 PMID:15677765 PMID:19254787 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (MGI:1352979|PMID:10655064) RGD PMID:10655064 MGI:1352979 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763 		JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6377914|PMID:29503843)		 Ensembl
RGD		 PMID:29503843 GO_REF:0000107 MGI:6377914 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO MGI:3576775 (PMID:15820682) RGD PMID:15820682 NCBI chr12:9,635,009...9,726,520
Ensembl chr12:9,635,025...9,726,519 		JBrowse link
G Sost sclerostin acts_upstream_of_or_within ISO MGI:5544793 (PMID:23918385) RGD PMID:23918385 NCBI chr10:86,912,517...86,915,561
Ensembl chr10:86,911,517...86,915,561 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISO
ISS		 (PMID:29503843)
(MGI:4947506|PMID:20056916)
GO_REF:0000024		 RGD
UniProt		 PMID:20056916 PMID:29503843 GO_REF:0000024 MGI:4947506 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 acts_upstream_of_or_within ISO (PMID:15820682) RGD PMID:15820682 NCBI chr 1:81,196,532...81,212,848
Ensembl chr 1:81,196,532...81,212,847 		JBrowse link
G Tmem53 transmembrane protein 53 involved_in ISO (PMID:33824347)
(MGI:6713651|PMID:33824347)		 RGD PMID:33824347 MGI:6713651 NCBI chr 5:130,721,780...130,737,692
Ensembl chr 5:130,721,659...130,737,692 		JBrowse link
G Tph1 tryptophan hydroxylase 1 IMP RGD PMID:20139991 RGD:5686362 NCBI chr 1:97,157,375...97,178,415
Ensembl chr 1:97,157,409...97,178,344 		JBrowse link
G Vdr vitamin D receptor IMP RGD PMID:32231239 RGD:32716373 NCBI chr 7:128,987,981...129,037,677
Ensembl chr 7:128,987,981...129,037,677 		JBrowse link
negative regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor IDA RGD PMID:12193573 RGD:625678 NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568 		JBrowse link
G Areg amphiregulin IDA RGD PMID:15509566 RGD:1578718 NCBI chr14:16,972,185...16,981,443
Ensembl chr14:16,972,187...16,981,535 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3579503 (PMID:15790973)		 Ensembl
RGD		 PMID:15790973 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bambi BMP and activin membrane-bound inhibitor acts_upstream_of ISO (PMID:21042576), (PMID:21743293) RGD PMID:21042576 PMID:21743293 NCBI chr17:54,121,251...54,125,816
Ensembl chr17:54,121,255...54,126,060 		JBrowse link
G Cdk6 cyclin-dependent kinase 6 involved_in ISO (PMID:15254224) RGD PMID:15254224 NCBI chr 4:30,637,650...30,829,688
Ensembl chr 4:30,646,460...30,829,634 		JBrowse link
G Chrd chordin involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15780974)
(PMID:18533030)		 Ensembl
RGD		 PMID:15780974 PMID:18533030 GO_REF:0000107 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 involved_in ISO (MGI:4410428|PMID:18187554) RGD PMID:18187554 MGI:4410428 NCBI chr  X:67,350,376...67,355,072
Ensembl chr  X:67,350,373...67,355,162 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 acts_upstream_of ISO (PMID:21042576), (PMID:21743293) RGD PMID:21042576 PMID:21743293 NCBI chr 6:16,695,864...16,870,264
Ensembl chr 6:16,697,829...16,870,259 		JBrowse link
G Erfe erythroferrone involved_in ISS
ISO		 GO_REF:0000024
(MGI:6712200|PMID:34002695)		 UniProt
RGD		 PMID:34002695 GO_REF:0000024 MGI:6712200 NCBI chr 9:91,956,971...91,964,846
Ensembl chr 9:91,956,977...91,964,846 		JBrowse link
G Fgf23 fibroblast growth factor 23 involved_in ISO (PMID:18282132) RGD PMID:18282132 NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821 		JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IMP RGD PMID:18690792 RGD:2325179 NCBI chr16:66,491,930...66,547,161
Ensembl chr16:66,494,042...66,547,350 		JBrowse link
G Fndc3b fibronectin type III domain containing 3B acts_upstream_of_or_within ISO MGI:4822558 (PMID:20493170) RGD PMID:20493170 NCBI chr 2:110,311,439...110,617,504
Ensembl chr 2:110,312,694...110,547,830 		JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist involved_in
acts_upstream_of_or_within		 ISO
ISS
IMP		 (PMID:27036124)
GO_REF:0000024
PMID:27910957		 RGD
UniProt		 PMID:27036124 PMID:27910957 GO_REF:0000024, RGD:38501075 NCBI chr 3:100,512,317...100,524,001
Ensembl chr 3:100,512,313...100,524,082 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta involved_in IEA
ISO		 GO_REF:0000107
(PMID:24023731)		 Ensembl
RGD		 PMID:24023731 GO_REF:0000107 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2653307 (PMID:19144722)		 Ensembl
RGD		 PMID:19144722 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15990875)		 Ensembl
RGD		 PMID:15990875 GO_REF:0000107 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (PMID:15990875) RGD PMID:15990875 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hdac7 histone deacetylase 7 involved_in ISO
IEA		 (PMID:17997710)
GO_REF:0000107		 RGD
Ensembl		 PMID:17997710 GO_REF:0000107 NCBI chr 7:128,923,918...128,961,926
Ensembl chr 7:128,923,920...128,962,072 		JBrowse link
G Hdac8 histone deacetylase 8 IMP RGD PMID:25019367 RGD:13208813 NCBI chr  X:67,385,288...67,593,014
Ensembl chr  X:67,385,289...67,592,923 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21324897)		 Ensembl
RGD		 PMID:21324897 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Id1 inhibitor of DNA binding 1 acts_upstream_of_or_within ISO MGI:1321394 (PMID:15161906) RGD PMID:15161906 NCBI chr 3:141,210,666...141,212,420
Ensembl chr 3:141,211,267...141,212,419 		JBrowse link
G Id2 inhibitor of DNA binding 2 acts_upstream_of_or_within ISO MGI:1321394 (PMID:15246553) RGD PMID:15246553 NCBI chr 6:41,740,556...41,742,393
Ensembl chr 6:41,728,946...41,744,400 		JBrowse link
G Id3 inhibitor of DNA binding 3 acts_upstream_of_or_within ISO MGI:1321394 (PMID:15161906) RGD PMID:15161906 NCBI chr 5:148,372,784...148,374,353
Ensembl chr 5:148,372,762...148,374,349 		JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 acts_upstream_of_or_within ISO MGI:87986|MGI:88177 (PMID:19208758) RGD PMID:19208758 NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156 		JBrowse link
G Ipo7 importin 7 involved_in ISO (MGI:7510301|PMID:35922041) RGD PMID:35922041 MGI:7510301 NCBI chr 1:164,062,702...164,102,938
Ensembl chr 1:164,062,702...164,102,938 		JBrowse link
G Limd1 LIM domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3807091|PMID:18657804)		 UniProt
RGD		 PMID:18657804 GO_REF:0000024 MGI:3807091 NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (PMID:17680723) RGD PMID:17680723 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1316736 (PMID:15563473)
MGI:96648 (PMID:15150273), (PMID:15563473)
GO_REF:0000107		 RGD
Ensembl		 PMID:15150273 PMID:15563473 GO_REF:0000107 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mir100 microRNA 100 acts_upstream_of ISO (PMID:22684006) RGD PMID:22684006 NCBI chr 8:41,901,225...41,901,304
Ensembl chr 8:41,901,225...41,901,304 		JBrowse link
G Mir106a microRNA 106a acts_upstream_of_or_within ISO (PMID:23399447) RGD PMID:23399447 NCBI chr  X:132,422,584...132,422,661
Ensembl chr  X:132,422,584...132,422,661 		JBrowse link
G Mir125a microRNA 125a IMP RGD PMID:29319166 RGD:26884461 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710 		JBrowse link
G Mir125b1 microRNA 125b-1 acts_upstream_of ISO (PMID:28214897) RGD PMID:28214897 NCBI chr 8:41,952,966...41,953,052
Ensembl chr 8:41,952,966...41,953,052 		JBrowse link
G Mir125b2 microRNA 125b-2 acts_upstream_of ISO (PMID:28214897) RGD PMID:28214897 NCBI chr11:16,245,620...16,245,707 JBrowse link
G Mir133a1 microRNA 133a-1 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr18:1,885,082...1,885,168 JBrowse link
G Mir137 microRNA 137 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 2:206,480,881...206,480,982
Ensembl chr 2:206,480,884...206,480,985 		JBrowse link
G Mir138-1 microRNA 138-1 involved_in ISO (PMID:21444814) RGD PMID:21444814 NCBI chr 8:122,300,966...122,301,064
Ensembl chr 8:122,300,966...122,301,064 		JBrowse link
G Mir138-2 microRNA 138-2 involved_in ISO (PMID:21444814) RGD PMID:21444814 NCBI chr19:10,674,193...10,674,274
Ensembl chr19:10,674,193...10,674,274 		JBrowse link
G Mir140 microRNA 140 acts_upstream_of ISO UniProtKB:P12643 (PMID:24928442) RGD PMID:24928442 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675 		JBrowse link
G Mir17 microRNA 17 acts_upstream_of_or_within ISO UniProtKB:P12643 (PMID:23399447) RGD PMID:23399447 NCBI chr15:92,180,629...92,180,712
Ensembl chr15:92,180,629...92,180,712 		JBrowse link
G Mir18a microRNA 18a involved_in ISO (PMID:34937502) RGD PMID:34937502 NCBI chr15:92,180,765...92,180,860
Ensembl chr15:92,180,765...92,180,860 		JBrowse link
G Mir204 microRNA 204 acts_upstream_of_or_within IMP
ISO		 (PMID:21628588) RGD PMID:21628588 PMID:29319166 RGD:26884461 NCBI chr 1:220,316,931...220,317,040
Ensembl chr 1:220,316,931...220,317,040 		JBrowse link
G Mir205 microRNA 205 acts_upstream_of
acts_upstream_of_or_within		 ISO UniProtKB:Q13950|UniProtKB:Q15797 (PMID:25012146)
(PMID:21628588)		 RGD PMID:21628588 PMID:25012146 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985 		JBrowse link
G Mir214 microRNA 214 acts_upstream_of
acts_upstream_of_or_within		 ISO (PMID:30703347)
(PMID:20534588)		 RGD PMID:20534588 PMID:30703347 NCBI chr13:74,588,374...74,588,481
Ensembl chr13:74,588,372...74,588,481 		JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609 		JBrowse link
G Mir221 microRNA 221 IMP RGD PMID:32194220 RGD:152025220 NCBI chr  X:3,429,465...3,429,573
Ensembl chr  X:3,429,465...3,429,573 		JBrowse link
G Mir222 microRNA 222 IMP RGD PMID:32194220 RGD:152025220 NCBI chr  X:3,428,904...3,429,006
Ensembl chr  X:3,428,904...3,429,006 		JBrowse link
G Mir23a microRNA 23a acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr19:23,954,997...23,955,071
Ensembl chr19:23,954,997...23,955,071 		JBrowse link
G Mir24-2 microRNA 24-2 involved_in ISO (PMID:30378100) RGD PMID:30378100 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790 		JBrowse link
G Mir30b microRNA 30b involved_in ISO (PMID:23968872) RGD PMID:23968872 NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675 		JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325 		JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425 		JBrowse link
G Mir320a microRNA 320a involved_in ISO (PMID:32271402) RGD PMID:32271402 NCBI chr15:45,516,392...45,516,473
Ensembl chr15:45,516,392...45,516,473 		JBrowse link
G Mir3582 microRNA 3582 acts_upstream_of_or_within ISO (PMID:21628588) RGD PMID:21628588 NCBI chr18:1,885,063...1,885,180
Ensembl chr18:1,885,063...1,885,180 		JBrowse link
G Mir665 microRNA 665 acts_upstream_of ISO (PMID:30545407) RGD PMID:30545407 NCBI chr 6:128,539,440...128,539,533
Ensembl chr 6:128,539,440...128,539,533 		JBrowse link
G Mir93 microRNA 93 acts_upstream_of ISO (PMID:28797104) RGD PMID:28797104 NCBI chr12:17,043,135...17,043,221
Ensembl chr12:17,043,135...17,043,221 		JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (PMID:27860183) RGD PMID:27860183 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342 		JBrowse link
G Nbr1 NBR1, autophagy cargo receptor involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818844|PMID:20616007)		 Ensembl
RGD		 PMID:20616007 GO_REF:0000107 MGI:4818844 NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412 		JBrowse link
G Nfatc1 nuclear factor of activated T-cells 1 acts_upstream_of_or_within ISO (PMID:19463978) RGD PMID:19463978 NCBI chr18:74,046,422...74,156,041
Ensembl chr18:74,046,904...74,156,028 		JBrowse link
G Noct nocturnin involved_in ISS
ISO		 GO_REF:0000024
(MGI:4457955|PMID:20498072)		 UniProt
RGD		 PMID:20498072 GO_REF:0000024 MGI:4457955 NCBI chr 2:135,271,189...135,291,407
Ensembl chr 2:135,271,189...135,291,400 		JBrowse link
G Nog noggin involved_in IEA
ISO		 GO_REF:0000107
(PMID:20675382)		 Ensembl
RGD		 PMID:20675382 GO_REF:0000107 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Notch1 notch receptor 1 involved_in ISO (MGI:4412151|PMID:19695258) RGD PMID:19695258 MGI:4412151 NCBI chr 3:9,277,955...9,323,531
Ensembl chr 3:9,278,086...9,323,531 		JBrowse link
G Ostn osteocrin acts_upstream_of_or_within ISO (PMID:14523025) RGD PMID:14523025 NCBI chr11:73,442,167...73,478,498
Ensembl chr11:73,442,487...73,468,603 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma acts_upstream_of ISO (PMID:21042576), (PMID:21743293) RGD PMID:21042576 PMID:21743293 NCBI chr 4:148,423,102...148,548,471
Ensembl chr 4:148,423,194...148,548,468 		JBrowse link
G Ptch1 patched 1 involved_in ISO (PMID:16229683) RGD PMID:16229683 NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333 		JBrowse link
G Ranbp3l RAN binding protein 3-like involved_in ISO (MGI:5883200|PMID:25755279) RGD PMID:25755279 MGI:5883200 NCBI chr 2:58,057,887...58,113,158
Ensembl chr 2:58,058,263...58,113,172 		JBrowse link
G Riox1 ribosomal oxygenase 1 involved_in ISO (MGI:4418587|PMID:19927124) RGD PMID:19927124 MGI:4418587 NCBI chr 6:103,579,642...103,582,260
Ensembl chr 6:103,579,642...103,582,250 		JBrowse link
G Rorb RAR-related orphan receptor B involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:5554363|PMID:22189870)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:22189870 GO_REF:0000024 GO_REF:0000107 MGI:5554363 NCBI chr 1:216,363,629...216,544,390
Ensembl chr 1:216,363,629...216,544,390 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3045799 (PMID:14976225)		 Ensembl
RGD		 PMID:14976225 GO_REF:0000107 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Ski Ski proto-oncogene involved_in ISO (PMID:14699069) RGD PMID:14699069 NCBI chr 5:165,713,525...165,782,134
Ensembl chr 5:165,714,093...165,782,733 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:1316736 (PMID:15150273) RGD PMID:15150273 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad6 SMAD family member 6 involved_in ISO (PMID:22275001) RGD PMID:22275001 NCBI chr 8:64,450,114...64,519,673
Ensembl chr 8:64,450,114...64,519,763 		JBrowse link
G Sox2 SRY-box transcription factor 2 acts_upstream_of_or_within ISO (PMID:15781477) RGD PMID:15781477 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox9 SRY-box transcription factor 9 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5317468|PMID:22421045), (MGI:6323929|PMID:31121357), (MGI:6414737|PMID:32103177)		 UniProt
RGD		 PMID:22421045 PMID:31121357 PMID:32103177 GO_REF:0000024 MGI:5317468 MGI:6323929 MGI:6414737 NCBI chr10:97,806,485...97,811,994
Ensembl chr10:97,806,485...97,811,994 		JBrowse link
G Tmem53 transmembrane protein 53 involved_in ISO (MGI:6713651|PMID:33824347) RGD PMID:33824347 MGI:6713651 NCBI chr 5:130,721,780...130,737,692
Ensembl chr 5:130,721,659...130,737,692 		JBrowse link
G Tmem64 transmembrane protein 64 involved_in ISO (MGI:5643786|PMID:25979161) RGD PMID:25979161 MGI:5643786 NCBI chr 5:28,698,947...28,745,384
Ensembl chr 5:28,698,918...28,745,330 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:5285024|PMID:21689636) RGD PMID:21689636 MGI:5285024 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629 		JBrowse link
G Tnfaip6 TNF alpha induced protein 6 involved_in ISO (PMID:16771708), (PMID:18586671) RGD PMID:16771708 PMID:18586671 NCBI chr 3:36,502,250...36,521,652
Ensembl chr 3:36,502,188...36,521,649 		JBrowse link
G Tnn tenascin N involved_in ISO (MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:3710297 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156 		JBrowse link
G Tob1 transducer of ErbB-2.1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1933294 (PMID:11163184)		 Ensembl
RGD		 PMID:11163184 GO_REF:0000107 NCBI chr10:79,163,093...79,165,131
Ensembl chr10:79,160,154...79,165,215 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23081848 RGD:10003033 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:16888803)
(PMID:15030764)		 RGD PMID:15030764 PMID:16888803 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:11062344)
MGI:3044412 (PMID:15030764)
GO_REF:0000024		 RGD
UniProt		 PMID:11062344 PMID:15030764 GO_REF:0000024 NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222 		JBrowse link
G Twsg1 twisted gastrulation BMP signaling modulator 1 acts_upstream_of_or_within ISO (PMID:15780974) RGD PMID:15780974 NCBI chr 9:105,533,116...105,567,460
Ensembl chr 9:105,533,136...105,567,479 		JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated acts_upstream_of_or_within ISO (PMID:18156182) RGD PMID:18156182 NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611 		JBrowse link
G Vegfc vascular endothelial growth factor C involved_in ISO (MGI:6378108|PMID:26934950) RGD PMID:26934950 MGI:6378108 NCBI chr16:37,712,251...37,827,845
Ensembl chr16:37,712,262...37,827,848 		JBrowse link
ossification involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 involved_in ISO MGI:1347346|MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 2:60,032,873...60,327,629
Ensembl chr 2:60,032,873...60,327,629 		JBrowse link
G Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif, 7 involved_in ISO MGI:1347346|MGI:2146046 (PMID:29618652) RGD PMID:29618652 NCBI chr 8:90,704,727...90,744,333
Ensembl chr 8:90,704,727...90,744,328 		JBrowse link
G Dchs1 dachsous cadherin-related 1 acts_upstream_of_or_within ISO MGI:4867020 (PMID:21303848) RGD PMID:21303848 NCBI chr 1:160,104,931...160,138,958
Ensembl chr 1:160,104,931...160,124,808 		JBrowse link
G Ebp EBP, cholestenol delta-isomerase involved_in ISO (PMID:10391219) RGD PMID:10391219 NCBI chr  X:14,299,427...14,305,826
Ensembl chr  X:14,299,448...14,305,826 		JBrowse link
G Ext1 exostosin glycosyltransferase 1 acts_upstream_of_or_within ISO (PMID:29415886) RGD PMID:29415886 NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357 		JBrowse link
G Fat4 FAT atypical cadherin 4 acts_upstream_of_or_within ISO MGI:3846573 (PMID:21303848) RGD PMID:21303848 NCBI chr 2:121,927,266...122,056,700
Ensembl chr 2:121,927,942...122,056,707 		JBrowse link
G Plxnb1 plexin B1 involved_in ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027 		JBrowse link
G Rhoa ras homolog family member A involved_in ISO (MGI:5297297|PMID:22019888) RGD PMID:22019888 MGI:5297297 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746 		JBrowse link
G Ryr1 ryanodine receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3764002|PMID:18003898)		 UniProt
RGD		 PMID:18003898 GO_REF:0000024 MGI:3764002 NCBI chr 1:84,292,578...84,423,824
Ensembl chr 1:84,292,578...84,423,812 		JBrowse link
G Sema4d semaphorin 4D involved_in ISO
IBA		 (PMID:22019888)
GO_REF:0000033
(MGI:5297297|PMID:22019888)		 RGD
GO_Central		 PMID:22019888 GO_REF:0000033 MGI:5297297 NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138 		JBrowse link
G Thbs3 thrombospondin 3 acts_upstream_of_or_within ISO MGI:3581964 (PMID:15964815) RGD PMID:15964815 NCBI chr 2:174,621,788...174,633,594
Ensembl chr 2:174,621,812...174,633,594 		JBrowse link
G Xylt1 xylosyltransferase 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5544658|PMID:24161523)		 UniProt
RGD		 PMID:24161523 GO_REF:0000024 MGI:5544658 NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IMP RGD PMID:27727328 RGD:40924666 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
ossification involved in bone remodeling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3830252 (PMID:18779865)		 Ensembl
RGD		 PMID:18779865 GO_REF:0000107 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Gdf5 growth differentiation factor 5 IEP RGD PMID:10404008 RGD:2289026 NCBI chr 3:144,454,316...144,458,508
Ensembl chr 3:144,454,338...144,458,612 		JBrowse link
G Ptn pleiotrophin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:19442624)		 UniProt
Ensembl
RGD		 PMID:19442624 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
osteoblast development term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase involved_in ISO
IEA		 (PMID:15454088)
GO_REF:0000107		 RGD
Ensembl		 PMID:15454088 GO_REF:0000107 NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein IEP RGD PMID:20020468 RGD:2316141 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IEP RGD PMID:1377818 RGD:69946 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in ISO (MGI:3839503|PMID:19251634) RGD PMID:19251634 MGI:3839503 NCBI chr 4:69,407,125...69,416,872
Ensembl chr 4:69,407,835...69,416,859 		JBrowse link
G Esr1 estrogen receptor 1 IEP RGD PMID:9528993 RGD:2313676 NCBI chr 1:41,106,335...41,499,104
Ensembl chr 1:41,210,475...41,495,002 		JBrowse link
G Gli2 GLI family zinc finger 2 acts_upstream_of_or_within ISO (PMID:16880529) RGD PMID:16880529 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Hdac4 histone deacetylase 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15990875)		 Ensembl
RGD		 PMID:15990875 GO_REF:0000107 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of_or_within ISO (PMID:15990875) RGD PMID:15990875 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:99829 (PMID:18986983) RGD PMID:18986983 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Hoxa2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2679336 (PMID:16751105)		 Ensembl
RGD		 PMID:16751105 GO_REF:0000107 NCBI chr 4:81,262,668...81,266,970
Ensembl chr 4:81,262,768...81,265,044 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1316736 (PMID:15563473)		 Ensembl
RGD		 PMID:15563473 GO_REF:0000107 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Limd1 LIM domain containing 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3698661|PMID:17092936), (MGI:3807091|PMID:18657804)		 UniProt
RGD		 PMID:17092936 PMID:18657804 GO_REF:0000024 MGI:3698661 MGI:3807091 NCBI chr 8:123,121,363...123,168,476
Ensembl chr 8:123,122,460...123,167,714 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in
acts_upstream_of_or_within		 ISO (MGI:4835143|PMID:17700537)
MGI:3612485 (PMID:16790443)		 RGD PMID:16790443 PMID:17700537 MGI:4835143 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:1316736 (PMID:15563473)
MGI:1201674|MGI:96648 (PMID:15150273), (PMID:15563473)
GO_REF:0000107		 RGD
Ensembl		 PMID:15150273 PMID:15563473 GO_REF:0000107 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Msx2 msh homeobox 2 acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA		 MGI:1926381 (PMID:10742104)
GO_REF:0000107		 RGD
Ensembl		 PMID:10742104 PMID:11336915 GO_REF:0000107, RGD:5132630 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Pth1r parathyroid hormone 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2154519 (PMID:9832460)		 Ensembl
RGD		 PMID:9832460 GO_REF:0000107 NCBI chr 8:110,693,910...110,725,458
Ensembl chr 8:110,697,485...110,719,729 		JBrowse link
G Pthlh parathyroid hormone-like hormone acts_upstream_of_or_within
involved_in		 TAS
ISO
IBA		 MGI:2154515 (PMID:9832460)
GO_REF:0000033		 RGD
GO_Central		 PMID:9832460 PMID:12706025 GO_REF:0000033, RGD:1601570 NCBI chr 4:180,188,792...180,199,847
Ensembl chr 4:180,188,792...180,199,847 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1341800 (PMID:18986983)		 Ensembl
RGD		 PMID:18986983 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Satb2 SATB homeobox 2 acts_upstream_of_or_within ISO MGI:3692768|MGI:96174 (PMID:16751105) RGD PMID:16751105 NCBI chr 9:58,348,027...58,534,256
Ensembl chr 9:58,350,246...58,530,707 		JBrowse link
G Shh sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:16880529)		 Ensembl
RGD		 PMID:16880529 GO_REF:0000107 NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170 		JBrowse link
G Smad3 SMAD family member 3 acts_upstream_of_or_within ISO MGI:1316736 (PMID:15150273) RGD PMID:15150273 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Tnn tenascin N involved_in ISO (MGI:3710297|PMID:17395156) RGD PMID:17395156 MGI:3710297 NCBI chr13:72,319,160...72,386,362
Ensembl chr13:72,319,155...72,408,156 		JBrowse link
osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 NOT|involved_in ISO (MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:5291888 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Adar adenosine deaminase, RNA-specific involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2182767|MGI:3032439 (PMID:23123729)		 Ensembl
RGD		 PMID:23123729 GO_REF:0000107 NCBI chr 2:175,138,391...175,178,280
Ensembl chr 2:175,138,403...175,178,282 		JBrowse link
G Akt1 AKT serine/threonine kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:88177|MGI:96440 (PMID:19208758)		 Ensembl
RGD		 PMID:19208758 GO_REF:0000107 NCBI chr 6:131,713,716...131,735,319
Ensembl chr 6:131,713,720...131,733,921 		JBrowse link
G Asf1a anti-silencing function 1A histone chaperone acts_upstream_of_or_within ISO MGI:1097686|MGI:1101768 (PMID:22705305) RGD PMID:22705305 NCBI chr20:32,893,962...32,908,808
Ensembl chr20:32,893,573...32,908,808 		JBrowse link
G Axin2 axin 2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:3579503 (PMID:15790973)		 Ensembl
RGD		 PMID:15790973 GO_REF:0000107 NCBI chr10:93,893,830...93,927,042
Ensembl chr10:93,899,245...93,926,231 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in TAS
IBA
ISO
IEP		 GO_REF:0000033
(PMID:17023519)		 GO_Central
RGD		 PMID:17023519 PMID:15456860 PMID:20022632 GO_REF:0000033, RGD:1578394, RGD:2316140 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20551513), (PMID:7798324)
MGI:101948|MGI:1922667|MGI:87986|MGI:88182|MGI:96440|MGI:99829 (PMID:15565649), (PMID:16109715), (PMID:19208758), (PMID:19213727)
(PMID:15254224), (PMID:18436533), (PMID:20576608), (PMID:23399447)
(PMID:15150273), (PMID:22705305)		 Ensembl
RGD		 PMID:7798324 PMID:15150273 PMID:15254224 PMID:15565649 PMID:16109715 More... GO_REF:0000107 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp3 bone morphogenetic protein 3 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr14:10,712,489...10,737,153
Ensembl chr14:10,712,489...10,737,153 		JBrowse link
G Bmp4 bone morphogenetic protein 4 involved_in
acts_upstream_of_or_within		 ISO
ISS
IEA		 (PMID:17720811)
(PMID:15381701)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:15381701 PMID:17720811 GO_REF:0000024 GO_REF:0000107 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 acts_upstream_of_or_within IEP
ISO		 MGI:88177 (PMID:16109715) RGD PMID:16109715 PMID:11995934 RGD:2289023 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bmp8a bone morphogenetic protein 8a involved_in ISO (MGI:5487540|PMID:12925636) RGD PMID:12925636 MGI:5487540 NCBI chr 5:135,589,839...135,617,785
Ensembl chr 5:135,591,716...135,617,785 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (PMID:7798324) RGD PMID:7798324 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (PMID:28214897)
(PMID:20551513)		 RGD PMID:20551513 PMID:28214897 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:22684006)
(PMID:7798324)		 RGD PMID:7798324 PMID:22684006 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Cbfb core-binding factor subunit beta acts_upstream_of_or_within ISO MGI:2447293 (PMID:12434156) RGD PMID:12434156 NCBI chr19:33,049,162...33,092,752
Ensembl chr19:33,049,172...33,092,751 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21403648)		 UniProt
RGD		 PMID:21403648 GO_REF:0000024 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938 		JBrowse link
G Ccn1 cellular communication network factor 1 acts_upstream_of_or_within ISO MGI:98956 (PMID:16581771) RGD PMID:16581771 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Ccn4 cellular communication network factor 4 involved_in IEA
ISO		 GO_REF:0000107
(MGI:6294593|PMID:15331410)		 Ensembl
RGD		 PMID:15331410 GO_REF:0000107 MGI:6294593 NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248 		JBrowse link
G Chrd chordin acts_upstream_of_or_within ISO (PMID:15381701) RGD PMID:15381701 NCBI chr11:80,171,994...80,181,166
Ensembl chr11:80,171,994...80,180,673 		JBrowse link
G Col11a2 collagen type XI alpha 2 chain IEP RGD PMID:11780999 RGD:1342432 NCBI chr20:4,786,932...4,816,598
Ensembl chr20:4,786,929...4,815,985 		JBrowse link
G Col1a1 collagen type I alpha 1 chain involved_in ISO (MGI:3828402|PMID:16311053) RGD PMID:16311053 MGI:3828402 NCBI chr10:79,883,622...79,900,625
Ensembl chr10:79,883,622...79,900,624 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4438316|PMID:19767743)		 UniProt
RGD		 PMID:19767743 GO_REF:0000024 MGI:4438316 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456 		JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:3830252 (PMID:18779865)		 Ensembl
RGD		 PMID:18779865 GO_REF:0000107 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:2148591|MGI:2148594|MGI:2450929 (PMID:15866163)
(PMID:24023731)		 Ensembl
RGD		 PMID:15866163 PMID:24023731 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Cyp24a1 cytochrome P450, family 24, subfamily a, polypeptide 1 involved_in ISO (PMID:17023519) RGD PMID:17023519 NCBI chr 3:159,275,947...159,290,383
Ensembl chr 3:159,275,947...159,290,383 		JBrowse link
G Dhh desert hedgehog signaling molecule acts_upstream_of_or_within ISO (PMID:25639508) RGD PMID:25639508 NCBI chr 7:130,050,910...130,056,406
Ensembl chr 7:130,050,910...130,056,406 		JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 acts_upstream_of_or_within ISO MGI:3526402 (PMID:21308776) RGD PMID:21308776 NCBI chr 6:128,410,216...128,417,518
Ensembl chr 6:128,410,316...128,417,522 		JBrowse link
G Dlx5 distal-less homeobox 5 involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3522068|PMID:15383550)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15383550 GO_REF:0000024 GO_REF:0000107 MGI:3522068 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in ISO MGI:2183411|MGI:2385534 (PMID:15920156), (PMID:21930712) RGD PMID:15920156 PMID:21930712 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Epha2 Eph receptor A2 involved_in ISO (MGI:5284751|PMID:19299512) RGD PMID:19299512 MGI:5284751 NCBI chr 5:153,605,644...153,634,115
Ensembl chr 5:153,605,644...153,634,117 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of ISO MGI:95729 (PMID:20570969) RGD PMID:20570969 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fgf9 fibroblast growth factor 9 acts_upstream_of_or_within ISO MGI:2135961 (PMID:17544391) RGD PMID:17544391 NCBI chr15:32,208,993...32,254,952
Ensembl chr15:32,210,074...32,253,309 		JBrowse link
G Fhl2 four and a half LIM domains 2 involved_in ISO
IEA		 (MGI:3828402|PMID:16311053)
GO_REF:0000107		 RGD
Ensembl		 PMID:16311053 GO_REF:0000107 MGI:3828402 NCBI chr 9:45,388,979...45,462,421
Ensembl chr 9:45,388,981...45,431,192 		JBrowse link
G Fignl1 fidgetin-like 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4943395|PMID:17352653)		 UniProt
RGD		 PMID:17352653 GO_REF:0000024 MGI:4943395 NCBI chr14:86,368,670...86,381,728
Ensembl chr14:86,368,675...86,377,455 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3757560 (PMID:20837772), (PMID:30181393)		 Ensembl
RGD		 PMID:20837772 PMID:30181393 GO_REF:0000107 NCBI chr 6:24,297,898...24,319,219
Ensembl chr 6:24,300,956...24,320,034 		JBrowse link
G Fto FTO, alpha-ketoglutarate dependent dioxygenase IMP RGD PMID:35006515 RGD:329951011 NCBI chr19:15,284,898...15,692,142
Ensembl chr19:15,349,696...15,692,083 		JBrowse link
G Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 IMP RGD PMID:12054677 RGD:625463 NCBI chr20:1,464,534...1,494,114
Ensembl chr20:1,464,534...1,493,994 		JBrowse link
G Gdf10 growth differentiation factor 10 involved_in IEP
IEA		 GO_REF:0000002 InterPro
RGD		 PMID:15994055 GO_REF:0000002, RGD:2316368 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343 		JBrowse link
G Gdf2 growth differentiation factor 2 acts_upstream_of_or_within ISO MGI:1341800|MGI:96396|MGI:96397|MGI:96398 (PMID:15161906), (PMID:18986983) RGD PMID:15161906 PMID:18986983 NCBI chr16:9,255,430...9,261,429
Ensembl chr16:9,255,430...9,261,429 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:1857177|MGI:2445468|MGI:3776013 (PMID:12606326), (PMID:21934140) RGD PMID:12606326 PMID:21934140 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Gli1 GLI family zinc finger 1 involved_in ISO (PMID:12165851) RGD PMID:12165851 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gli2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:12165851)
MGI:1915509 (PMID:22771375)		 RGD PMID:12165851 PMID:22771375 NCBI chr13:29,946,882...30,163,589
Ensembl chr13:29,946,809...30,163,574 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of ISO MGI:1856276|MGI:95516 (PMID:20570969) RGD PMID:20570969 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Glis1 GLIS family zinc finger 1 involved_in ISO (MGI:6294234|PMID:30544251) RGD PMID:30544251 MGI:6294234 NCBI chr 5:122,222,155...122,412,141
Ensembl chr 5:122,222,128...122,412,141 		JBrowse link
G Gpnmb glycoprotein nmb IEP RGD PMID:11746512 RGD:632991 NCBI chr 4:78,010,247...78,031,491
Ensembl chr 4:78,010,197...78,049,367 		JBrowse link
G H3f3a H3.3 histone A acts_upstream_of_or_within ISO MGI:1101768|MGI:1913653|MGI:99430 (PMID:22705305) RGD PMID:22705305 NCBI chr13:92,533,289...92,544,902
Ensembl chr13:92,533,298...92,544,908 		JBrowse link
G H3f3b H3.3 histone B acts_upstream_of_or_within ISO MGI:1097686|MGI:1913653|MGI:99430 (PMID:22705305) RGD PMID:22705305 NCBI chr10:101,256,484...101,258,716
Ensembl chr10:101,256,480...101,258,709 		JBrowse link
G Hand2 heart and neural crest derivatives expressed 2 involved_in
acts_upstream_of		 IEA
ISO		 GO_REF:0000107
MGI:2653307 (PMID:19144722)		 Ensembl
RGD		 PMID:19144722 GO_REF:0000107 NCBI chr16:32,917,448...32,920,791
Ensembl chr16:32,917,823...32,919,891 		JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of ISO (PMID:15990875) RGD PMID:15990875 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Hdac5 histone deacetylase 5 acts_upstream_of ISO (PMID:15990875) RGD PMID:15990875 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235 		JBrowse link
G Hira histone cell cycle regulator acts_upstream_of_or_within ISO MGI:1097686|MGI:1101768|MGI:3650546 (PMID:22705305) RGD PMID:22705305 NCBI chr11:82,024,469...82,133,212
Ensembl chr11:82,024,469...82,133,529 		JBrowse link
G Id4 inhibitor of DNA binding 4 acts_upstream_of_or_within ISO (PMID:20628571) RGD PMID:20628571 NCBI chr17:16,389,387...16,391,956
Ensembl chr17:16,389,387...16,392,470 		JBrowse link
G Ift80 intraflagellar transport 80 acts_upstream_of_or_within ISO MGI:3689350|MGI:5818514|MGI:95728 (PMID:22771375), (PMID:26996322) RGD PMID:22771375 PMID:26996322 NCBI chr 2:153,144,707...153,240,024
Ensembl chr 2:153,145,795...153,240,024 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in ISO (MGI:3828402|PMID:16311053) RGD PMID:16311053 MGI:3828402 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Igf2 insulin-like growth factor 2 involved_in ISO (MGI:3828402|PMID:16311053) RGD PMID:16311053 MGI:3828402 NCBI chr 1:197,814,409...197,831,802
Ensembl chr 1:197,814,410...197,823,018 		JBrowse link
G Igfbp3 insulin-like growth factor binding protein 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3828402|PMID:16311053)		 Ensembl
RGD		 PMID:16311053 GO_REF:0000107 MGI:3828402 NCBI chr14:82,056,347...82,064,083
Ensembl chr14:82,056,347...82,064,083 		JBrowse link
G Igfbp5 insulin-like growth factor binding protein 5 involved_in ISO (MGI:3828402|PMID:16311053) RGD PMID:16311053 MGI:3828402 NCBI chr 9:74,452,371...74,464,953
Ensembl chr 9:74,448,382...74,465,156 		JBrowse link
G Ihh Indian hedgehog signaling molecule acts_upstream_of_or_within ISO MGI:1928765|MGI:1934258 (PMID:14973297), (PMID:25639508) RGD PMID:14973297 PMID:25639508 NCBI chr 9:76,504,315...76,510,532
Ensembl chr 9:76,504,315...76,510,532 		JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18165223 RGD:4889468 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887 		JBrowse link
G Junb JunB proto-oncogene, AP-1 transcription factor subunit acts_upstream_of_or_within ISO MGI:2176174|MGI:3036209 (PMID:14769860) RGD PMID:14769860 NCBI chr19:23,176,265...23,178,049
Ensembl chr19:23,176,294...23,178,035 		JBrowse link
G Lef1 lymphoid enhancer binding factor 1 involved_in ISO
IEA		 (PMID:20128911)
GO_REF:0000107		 RGD
Ensembl		 PMID:20128911 GO_REF:0000107 NCBI chr 2:219,666,549...219,779,815
Ensembl chr 2:219,666,592...219,779,794 		JBrowse link
G Lgr4 leucine-rich repeat-containing G protein-coupled receptor 4 involved_in ISO
ISS		 (MGI:4360132|PMID:19605502)
GO_REF:0000024		 RGD
UniProt		 PMID:19605502 GO_REF:0000024 MGI:4360132 NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899 		JBrowse link
G Lox lysyl oxidase acts_upstream_of_or_within ISO MGI:3610732 (PMID:19458888) RGD PMID:19458888 NCBI chr18:45,964,544...45,977,431
Ensembl chr18:45,967,343...46,041,477 		JBrowse link
G Lrrc17 leucine rich repeat containing 17 NOT|involved_in ISO (MGI:3850892|PMID:19336404) RGD PMID:19336404 MGI:3850892 NCBI chr 4:13,501,428...13,531,845
Ensembl chr 4:13,501,436...13,531,845 		JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 involved_in ISO (PMID:20551513) RGD PMID:20551513 NCBI chr10:95,373,304...95,490,406
Ensembl chr10:95,373,204...95,488,293 		JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 involved_in ISO MGI:3696052 (PMID:20551513) RGD PMID:20551513 NCBI chr 5:46,356,973...46,415,597
Ensembl chr 5:46,357,931...46,415,597 		JBrowse link
G Mapk11 mitogen-activated protein kinase 11 involved_in ISO (PMID:20551513) RGD PMID:20551513 NCBI chr 7:120,218,471...120,225,488
Ensembl chr 7:120,218,478...120,225,395 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in IEA
ISO		 GO_REF:0000107
MGI:3696052 (PMID:20551513)		 Ensembl
RGD		 PMID:20551513 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in
acts_upstream_of_or_within		 ISO (MGI:5285459|PMID:21652706)
MGI:99533 (PMID:17336904)		 RGD PMID:17336904 PMID:21652706 MGI:5285459 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mef2d myocyte enhancer factor 2D involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:99458 (PMID:17336904)		 Ensembl
RGD		 PMID:17336904 GO_REF:0000107 NCBI chr 2:173,606,054...173,635,620
Ensembl chr 2:173,606,490...173,634,457 		JBrowse link
G Mir346 microRNA 346 involved_in ISO (PMID:24023731) RGD PMID:24023731 NCBI chr16:10,218,118...10,218,215
Ensembl chr16:10,218,118...10,218,215 		JBrowse link
G Mmp13 matrix metallopeptidase 13 IEP RGD PMID:10528234 RGD:10043160 NCBI chr 8:4,497,960...4,508,239
Ensembl chr 8:4,497,960...4,508,239 		JBrowse link
G Msx2 msh homeobox 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3522068|PMID:15383550)		 UniProt
RGD		 PMID:15383550 GO_REF:0000024 MGI:3522068 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Myoc myocilin involved_in ISS
IBA
ISO
IEA		 GO_REF:0000024
GO_REF:0000033
(MGI:5503270|PMID:23629661)
(PMID:23629661)
GO_REF:0000107		 UniProt
GO_Central
RGD
Ensembl		 PMID:23629661 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 MGI:5503270 NCBI chr13:74,976,730...74,987,128
Ensembl chr13:74,976,730...74,987,127 		JBrowse link
G Nf1 neurofibromin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1857478 (PMID:16893911)
GO_REF:0000024		 Ensembl
RGD
HGNC-UCL		 PMID:16893911 GO_REF:0000024 GO_REF:0000107 NCBI chr10:64,306,027...64,539,112
Ensembl chr10:64,306,301...64,536,658 		JBrowse link
G Nog noggin involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:3810620|PMID:10780858)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:10780858 GO_REF:0000024 GO_REF:0000107 MGI:3810620 NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339 		JBrowse link
G Nr1i3 nuclear receptor subfamily 1, group I, member 3 IEP RGD PMID:19702932 RGD:9835391 NCBI chr13:83,632,940...83,638,193
Ensembl chr13:83,632,899...83,637,906 		JBrowse link
G Panx3 pannexin 3 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5052205|PMID:21690309)		 UniProt
RGD		 PMID:21690309 GO_REF:0000024 MGI:5052205 NCBI chr 8:37,366,758...37,377,640
Ensembl chr 8:37,366,862...37,377,640 		JBrowse link
G Pcp4 Purkinje cell protein 4 IEP RGD PMID:18008138 RGD:9850248 NCBI chr11:35,759,711...35,861,725
Ensembl chr11:35,800,713...35,861,725 		JBrowse link
G Penk proenkephalin IEP RGD PMID:8584038 RGD:10003035 NCBI chr 5:17,183,799...17,189,160
Ensembl chr 5:17,183,806...17,189,129 		JBrowse link
G Rack1 receptor for activated C kinase 1 involved_in HDA PMID:16210410 UniProt PMID:16210410 RGD:8655526 NCBI chr10:33,169,415...33,174,896
Ensembl chr10:33,169,169...33,174,975 		JBrowse link
G Rps11 ribosomal protein S11 involved_in HDA PMID:16210410 UniProt PMID:16210410 RGD:8655526 NCBI chr 1:95,605,690...95,607,798
Ensembl chr 1:95,605,692...95,607,874 		JBrowse link
G Rspo2 R-spondin 2 acts_upstream_of_or_within ISO MGI:88177 (PMID:19213727) RGD PMID:19213727 NCBI chr 7:74,096,378...74,239,398
Ensembl chr 7:74,103,090...74,238,933 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within
involved_in		 IMP
ISO		 MGI:1917649|MGI:2183833|MGI:88177 (PMID:15389629), (PMID:15565649), (PMID:16099986)
(PMID:21930712)
RNAcentral:URS0000446722_9606 (PMID:20128911), (PMID:25012146)		 RGD PMID:15389629 PMID:15565649 PMID:16099986 PMID:20128911 PMID:21930712 More... RGD:12880052 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 involved_in IEA
IEP
ISO		 GO_REF:0000107
PMID:16149051
(PMID:16149051)		 Ensembl
RGD		 PMID:16149051 PMID:16149051 GO_REF:0000107, RGD:4107087 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Shox2 SHOX homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3626291 (PMID:18514492)		 Ensembl
RGD		 PMID:18514492 GO_REF:0000107 NCBI chr 2:151,217,049...151,227,180
Ensembl chr 2:151,217,552...151,227,143 		JBrowse link
G Sirt7 sirtuin 7 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6209006|PMID:30026585)		 UniProt
RGD		 PMID:30026585 GO_REF:0000024 MGI:6209006 NCBI chr10:105,896,476...105,903,301
Ensembl chr10:105,896,476...105,903,172 		JBrowse link
G Smad1 SMAD family member 1 involved_in ISO (PMID:7798324) RGD PMID:7798324 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad3 SMAD family member 3 involved_in ISO (MGI:3654245|PMID:11585338) RGD PMID:11585338 MGI:3654245 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Smad4 SMAD family member 4 IMP RGD PMID:19940863 RGD:12880052 NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438 		JBrowse link
G Smad5 SMAD family member 5 involved_in ISO (PMID:30378100) RGD PMID:30378100 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Smo smoothened, frizzled class receptor acts_upstream_of_or_within
involved_in		 IEP
ISO
IEA		 MGI:2176256 (PMID:14973297)
GO_REF:0000107		 RGD
Ensembl		 PMID:14973297 PMID:19649528 GO_REF:0000107, RGD:2324984 NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829 		JBrowse link
G Snai1 snail family transcriptional repressor 1 involved_in ISO (PMID:20128911) RGD PMID:20128911 NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:20128911) RGD PMID:20128911 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Sox2 SRY-box transcription factor 2 involved_in
acts_upstream_of		 ISO (PMID:18187129)
(PMID:15781477)		 RGD PMID:15781477 PMID:18187129 NCBI chr 2:117,536,929...117,539,340
Ensembl chr 2:117,536,929...117,539,338 		JBrowse link
G Sox8 SRY-box transcription factor 8 involved_in
acts_upstream_of_or_within		 ISS
ISO		 GO_REF:0000024
MGI:2154329 (PMID:15753123)		 UniProt
RGD		 PMID:15753123 GO_REF:0000024 NCBI chr10:14,584,829...14,589,818
Ensembl chr10:14,584,829...14,589,818 		JBrowse link
G Sp7 Sp7 transcription factor involved_in
acts_upstream_of_or_within		 ISO (PMID:18932205)
MGI:2159411 (PMID:11792318)		 RGD PMID:11792318 PMID:18932205 NCBI chr 7:133,484,609...133,494,788
Ensembl chr 7:133,484,609...133,494,847 		JBrowse link
G Spp1 secreted phosphoprotein 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:15598896 GO_REF:0000033, RGD:1581126 NCBI chr14:5,308,885...5,315,120
Ensembl chr14:5,308,885...5,315,162 		JBrowse link
G Tgfbr3 transforming growth factor beta receptor 3 acts_upstream_of_or_within ISO (PMID:25382630) RGD PMID:25382630 NCBI chr14:2,489,397...2,665,383
Ensembl chr14:2,489,397...2,663,341 		JBrowse link
G Tmem119 transmembrane protein 119 acts_upstream_of_or_within ISO (PMID:21239498) RGD PMID:21239498 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689 		JBrowse link
G Tmsb4x thymosin beta 4, X-linked IEP RGD PMID:2325669 RGD:729958 NCBI chr  X:27,144,666...27,146,667
Ensembl chr  X:27,128,610...27,146,667 		JBrowse link
G Tmt1a thiol methyltransferase 1A involved_in ISO (PMID:34226523) RGD PMID:34226523 NCBI chr 7:131,452,099...131,460,154
Ensembl chr 7:131,451,641...131,460,154 		JBrowse link
G Tp53inp2 tumor protein p53 inducible nuclear protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21467300)		 Ensembl
RGD		 PMID:21467300 GO_REF:0000107 NCBI chr 3:143,881,427...143,890,104
Ensembl chr 3:143,882,021...143,890,097 		JBrowse link
G Twist1 twist family bHLH transcription factor 1 acts_upstream_of_or_within ISO MGI:1857265|MGI:3038818 (PMID:15030764) RGD PMID:15030764 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Twist2 twist family bHLH transcription factor 2 acts_upstream_of_or_within ISO MGI:3044412 (PMID:15030764) RGD PMID:15030764 NCBI chr 9:92,374,740...92,419,222
Ensembl chr 9:92,374,574...92,419,222 		JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated acts_upstream_of ISO (PMID:18156182) RGD PMID:18156182 NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of ISO (PMID:19723499) RGD PMID:19723499 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt11 Wnt family member 11 acts_upstream_of_or_within ISO MGI:1922667|MGI:88177 (PMID:19213727) RGD PMID:19213727 NCBI chr 1:153,134,503...153,154,294
Ensembl chr 1:153,138,197...153,154,294 		JBrowse link
G Wnt3a Wnt family member 3A acts_upstream_of_or_within ISO MGI:88613 (PMID:16581771) RGD PMID:16581771 NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of ISO (PMID:15576404) RGD PMID:15576404 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Wwox WW domain-containing oxidoreductase acts_upstream_of_or_within ISO MGI:3704944 (PMID:18487609) RGD PMID:18487609 NCBI chr19:42,432,141...43,360,278
Ensembl chr19:42,432,152...43,359,391 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 acts_upstream_of_or_within ISO MGI:88177 (PMID:16099986) RGD PMID:16099986 NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968 		JBrowse link
osteoblast fate commitment term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:109452|MGI:1328787|MGI:99829 (PMID:15150273) RGD PMID:15150273 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1316736 (PMID:15150273)		 Ensembl
RGD		 PMID:15150273 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sh3pxd2b SH3 and PX domains 2B involved_in ISO (MGI:5800302|PMID:27711054) RGD PMID:27711054 MGI:5800302 NCBI chr10:16,918,611...17,027,499
Ensembl chr10:16,918,679...17,005,170 		JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1316736 (PMID:15150273)		 Ensembl
RGD		 PMID:15150273 GO_REF:0000107 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO MGI:1316736 (PMID:15150273) RGD PMID:15150273 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
positive regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:18436533)
GO_REF:0000107		 RGD
Ensembl		 PMID:18436533 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvr2a activin A receptor type 2A involved_in IEA
ISO		 GO_REF:0000107
(PMID:18436533)		 Ensembl
RGD		 PMID:18436533 GO_REF:0000107 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Acvr2b activin A receptor type 2B involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 involved_in ISO (MGI:6211994|PMID:22419726) RGD PMID:22419726 MGI:6211994 NCBI chr 2:11,331,434...11,911,713
Ensembl chr 2:11,331,442...11,911,688 		JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1859675 (PMID:15724149)		 Ensembl
RGD		 PMID:15724149 GO_REF:0000107 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512 		JBrowse link
G Alox5 arachidonate 5-lipoxygenase involved_in ISS
ISO
IEA		 GO_REF:0000024
(MGI:6393219|PMID:24906289)
GO_REF:0000107		 UniProt
RGD
Ensembl		 PMID:24906289 GO_REF:0000024 GO_REF:0000107 MGI:6393219 NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743 		JBrowse link
G Ano6 anoctamin 6 involved_in ISO (PMID:25589784)
(MGI:5634871|PMID:25589784)		 RGD PMID:25589784 MGI:5634871 NCBI chr 7:126,933,919...127,113,588
Ensembl chr 7:126,933,936...127,113,589 		JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:5780494|PMID:26392310)		 UniProt
Ensembl
RGD		 PMID:26392310 GO_REF:0000024 GO_REF:0000107 MGI:5780494 NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295 		JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:25,315,236...25,319,821 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5009350|PMID:20675382)
(PMID:18436533), (PMID:20576608)		 UniProt
RGD		 PMID:18436533 PMID:20576608 PMID:20675382 GO_REF:0000024 MGI:5009350 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 IDA
ISO
ISS
IEA		 (PMID:14749725)
GO_REF:0000024
(PMID:14749725), (PMID:18436533)
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:14749725 PMID:18436533 PMID:15352071 GO_REF:0000024 GO_REF:0000107, RGD:9068399 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Ccn1 cellular communication network factor 1 involved_in ISO
IEA		 (PMID:20675382)
GO_REF:0000107		 RGD
Ensembl		 PMID:20675382 GO_REF:0000107 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Cd276 Cd276 molecule acts_upstream_of_or_within ISO MGI:3033707 (PMID:15317945) RGD PMID:15317945 NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380 		JBrowse link
G Csf1r colony stimulating factor 1 receptor IMP RGD PMID:18434589 RGD:151665814 NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415 		JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:17369251), (PMID:22615579) RGD PMID:17369251 PMID:22615579 NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (MGI:4836762|PMID:20855508) RGD PMID:20855508 MGI:4836762 NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135670 (PMID:20053668) RGD PMID:20053668 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Fzd9 frizzled class receptor 9 involved_in ISS
ISO		 GO_REF:0000024
(MGI:4943600|PMID:21402791)		 UniProt
RGD		 PMID:21402791 GO_REF:0000024 MGI:4943600 NCBI chr12:21,427,084...21,429,398
Ensembl chr12:21,427,084...21,429,398 		JBrowse link
G Gpm6b glycoprotein m6b involved_in ISS
ISO		 GO_REF:0000024
(PMID:21638316)		 UniProt
RGD		 PMID:21638316 GO_REF:0000024 NCBI chr  X:28,057,788...28,204,409
Ensembl chr  X:28,059,450...28,204,211 		JBrowse link
G Isg15 ISG15 ubiquitin-like modifier involved_in ISO (MGI:4943600|PMID:21402791) RGD PMID:21402791 MGI:4943600 NCBI chr 5:166,784,148...166,785,435
Ensembl chr 5:166,784,148...166,785,435 		JBrowse link
G Kl Klotho involved_in ISO
IEA		 (PMID:12110410)
GO_REF:0000107		 RGD
Ensembl		 PMID:12110410 GO_REF:0000107 NCBI chr12:490,402...531,417
Ensembl chr12:490,399...530,080 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:5285459|PMID:21652706)		 UniProt
RGD		 PMID:21652706 GO_REF:0000024 MGI:5285459 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Mia3 MIA SH3 domain ER export factor 3 acts_upstream_of_or_within ISO MGI:5007248 (PMID:21606205) RGD PMID:21606205 NCBI chr13:94,970,421...95,012,071
Ensembl chr13:94,970,424...95,011,972 		JBrowse link
G Nell1 neural EGFL like 1 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21723284)		 UniProt
RGD		 PMID:21723284 GO_REF:0000024 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860 		JBrowse link
G Osr1 odd-skipped related transcription factor 1 involved_in ISO UniProtKB:Q91ZD1 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 6:32,369,561...32,380,822
Ensembl chr 6:32,373,816...32,380,817 		JBrowse link
G Osr2 odd-skipped related transciption factor 2 involved_in ISO UniProtKB:Q9WVG7 (MGI:4950000|PMID:21262216) RGD PMID:21262216 MGI:4950000 NCBI chr 7:66,487,841...66,495,003
Ensembl chr 7:66,487,839...66,495,224 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:2386080 (PMID:12677010), (PMID:18519738) RGD PMID:12677010 PMID:18519738 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Pkdcc protein kinase domain containing, cytoplasmic involved_in ISO (MGI:3813934|PMID:19097194) RGD PMID:19097194 MGI:3813934 NCBI chr 6:11,455,686...11,465,002
Ensembl chr 6:11,455,686...11,465,556 		JBrowse link
G Pla2g4a phospholipase A2 group 4A IEP RGD PMID:10807497 RGD:1642474 NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266 		JBrowse link
G Pth parathyroid hormone involved_in IDA
ISO		 (PMID:17696759) RGD PMID:17696759 PMID:15758479 PMID:22445539 RGD:7207452, RGD:7242906 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Ptn pleiotrophin involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6294181|PMID:19442624)		 UniProt
Ensembl
RGD		 PMID:19442624 GO_REF:0000024 GO_REF:0000107 MGI:6294181 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Slc20a2 solute carrier family 20 member 2 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6342320|PMID:30721528)		 UniProt
RGD		 PMID:30721528 GO_REF:0000024 MGI:6342320 NCBI chr16:69,460,850...69,551,418
Ensembl chr16:69,460,462...69,521,711 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO
IEA		 (PMID:25589784)
GO_REF:0000107		 RGD
Ensembl		 PMID:25589784 GO_REF:0000107 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Smad3 SMAD family member 3 IDA rat gene expressed in mouse osteoblastic cell line MC3T3-E1; TGF-beta down-regulates this activity RGD PMID:12096832 RGD:727387 NCBI chr 8:64,126,829...64,236,960
Ensembl chr 8:64,110,039...64,236,960 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in ISO (MGI:6717031|PMID:33882302) RGD PMID:33882302 MGI:6717031 NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
G Tfap2a transcription factor AP-2 alpha involved_in ISO
ISS		 (PMID:19578371)
GO_REF:0000024		 RGD
UniProt		 PMID:19578371 GO_REF:0000024 NCBI chr17:24,028,716...24,047,507
Ensembl chr17:24,024,432...24,047,507 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO
IBA		 (PMID:20025746)
GO_REF:0000033
(MGI:4418582|PMID:20025746), (MGI:5700277|PMID:26207632)		 RGD
GO_Central		 PMID:20025746 PMID:26207632 GO_REF:0000033 MGI:4418582 MGI:5700277 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:15728361) RGD PMID:15728361 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:17720811) RGD PMID:17720811 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
positive regulation of bone mineralization involved in bone maturation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:5291888|PMID:21784188) RGD PMID:21784188 MGI:5291888 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 acts_upstream_of_or_within ISO MGI:3840841 (PMID:21490954) RGD PMID:21490954 NCBI chr 6:26,425,017...26,514,899
Ensembl chr 6:26,425,954...26,507,477 		JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in ISO
ISS		 (PMID:16433617)
GO_REF:0000024		 RGD
UniProt		 PMID:16433617 GO_REF:0000024 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
positive regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:30067871 RGD:329412472 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
G Bmp2 bone morphogenetic protein 2 acts_upstream_of_or_within ISO (PMID:9213002)
(PMID:15820682), (PMID:21324897)		 RGD PMID:9213002 PMID:15820682 PMID:21324897 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within IMP
ISO
IDA		 (PMID:8358941)
PMID:7911662
(PMID:14749725)		 RGD PMID:8358941 PMID:14749725 PMID:17112416 PMID:7911662 RGD:1643600, RGD:632977 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (MGI:2429424|PMID:12441304) RGD PMID:12441304 MGI:2429424 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Lrp6 LDL receptor related protein 6 acts_upstream_of_or_within ISO MGI:2673982 (PMID:15469977) RGD PMID:15469977 NCBI chr 4:167,269,856...167,400,364
Ensembl chr 4:167,270,353...167,400,497 		JBrowse link
G Nell1 neural EGFL like 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:19493425 GO_REF:0000033, RGD:2314454 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860 		JBrowse link
G Nipbl NIPBL, cohesin loading factor acts_upstream_of_or_within ISO MGI:4332250 (PMID:19763162) RGD PMID:19763162 NCBI chr 2:57,399,443...57,586,770
Ensembl chr 2:57,399,445...57,565,899 		JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:18257653 RGD:2304114 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490 		JBrowse link
G P2rx7 purinergic receptor P2X 7 acts_upstream_of_or_within ISO MGI:2386080 (PMID:16269410), (PMID:18519738) RGD PMID:16269410 PMID:18519738 NCBI chr12:33,889,709...33,934,168
Ensembl chr12:33,879,745...33,934,619 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:14751573 PMID:17106877 RGD:10043372, RGD:10045950 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
G Pth parathyroid hormone IDA RGD PMID:15758479 RGD:7207452 NCBI chr 1:167,508,121...167,511,530
Ensembl chr 1:167,508,598...167,511,530 		JBrowse link
G Ptn pleiotrophin involved_in IMP PMID:9817766 UniProt PMID:9817766 RGD:14397563 NCBI chr 4:65,293,731...65,375,572
Ensembl chr 4:65,293,734...65,375,456 		JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(MGI:6414736|PMID:29644115)		 UniProt
Ensembl
RGD		 PMID:29644115 GO_REF:0000024 GO_REF:0000107 MGI:6414736 NCBI chr12:35,365,436...35,424,925
Ensembl chr12:35,383,144...35,424,925 		JBrowse link
G Runx2 RUNX family transcription factor 2 IMP RGD PMID:11784711 RGD:1601657 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 acts_upstream_of_or_within ISO MGI:5698367 (PMID:25639508) RGD PMID:25639508 NCBI chr 1:163,831,876...163,899,925
Ensembl chr 1:163,832,015...163,899,393 		JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase IMP RGD PMID:30746871 RGD:151665130 NCBI chr 8:110,511,808...110,597,475
Ensembl chr 8:110,511,772...110,597,489 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3052265|PMID:15254231)
(PMID:20626275)		 UniProt
RGD		 PMID:15254231 PMID:20626275 GO_REF:0000024 MGI:3052265 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Tac1 tachykinin, precursor 1 IDA RGD PMID:17204323 RGD:2304342 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178 		JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:17204323 RGD:2304342 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733 		JBrowse link
G Thrb thyroid hormone receptor beta IDA RGD PMID:15647824 RGD:1601663 NCBI chr15:7,685,180...8,031,920
Ensembl chr15:7,685,180...7,882,916 		JBrowse link
G Tob2 transducer of ERBB2, 2 acts_upstream_of_or_within ISO MGI:3789484 (PMID:18358842) RGD PMID:18358842 NCBI chr 7:113,362,703...113,371,423
Ensembl chr 7:113,361,148...113,372,688 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO MGI:3582610|MGI:98578 (PMID:15728361), (PMID:17708715), (PMID:19723499) RGD PMID:15728361 PMID:17708715 PMID:19723499 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA		 (PMID:20032469)
GO_REF:0000107		 RGD
Ensembl		 PMID:20032469 GO_REF:0000107 NCBI chr16:3,697,032...3,718,230
Ensembl chr16:3,697,032...3,718,234 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 involved_in ISS
ISO		 GO_REF:0000024
(PMID:21547890)		 UniProt
RGD		 PMID:21547890 GO_REF:0000024 NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011 		JBrowse link
positive regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO
IEA		 (PMID:18436533)
GO_REF:0000107		 RGD
Ensembl		 PMID:18436533 GO_REF:0000107 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Acvr2a activin A receptor type 2A involved_in ISO
IEA		 (PMID:18436533)
GO_REF:0000107		 RGD
Ensembl		 PMID:18436533 GO_REF:0000107 NCBI chr 3:33,204,961...33,292,673
Ensembl chr 3:33,205,523...33,289,968 		JBrowse link
G Acvr2b activin A receptor type 2B involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 8:119,138,901...119,178,477
Ensembl chr 8:119,138,812...119,170,458 		JBrowse link
G Atraid all-trans retinoic acid-induced differentiation factor involved_in ISO (PMID:21723284) RGD PMID:21723284 NCBI chr 6:25,315,236...25,319,821 JBrowse link
G Bmp2 bone morphogenetic protein 2 involved_in
acts_upstream_of_or_within		 ISO
IEA		 (MGI:5009350|PMID:20675382)
(PMID:15175325), (PMID:16099986)
GO_REF:0000107		 RGD
Ensembl		 PMID:15175325 PMID:16099986 PMID:20675382 GO_REF:0000107 MGI:5009350 NCBI chr 3:120,812,660...120,822,579
Ensembl chr 3:120,812,882...120,821,397 		JBrowse link
G Bmp4 bone morphogenetic protein 4 acts_upstream_of_or_within
involved_in		 IMP
ISO
ISS
IEA
IDA		 (PMID:14749725)
(PMID:18436533)
GO_REF:0000024
GO_REF:0000107		 RGD
UniProt
Ensembl		 PMID:14749725 PMID:18436533 PMID:17112416 PMID:16245174 GO_REF:0000024 GO_REF:0000107, RGD:1643600, RGD:2289011 NCBI chr15:19,618,538...19,633,494
Ensembl chr15:19,618,542...19,623,306 		JBrowse link
G Bmp6 bone morphogenetic protein 6 involved_in IMP
ISO		 (PMID:18436533) RGD PMID:18436533 PMID:9202223 RGD:2289027 NCBI chr17:26,318,121...26,469,691
Ensembl chr17:26,318,569...26,470,365 		JBrowse link
G Bmp7 bone morphogenetic protein 7 involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788 		JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr16:9,736,390...9,829,825
Ensembl chr16:9,736,630...9,780,616 		JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368 		JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 involved_in ISO (PMID:18436533) RGD PMID:18436533 NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809 		JBrowse link
G Ccn1 cellular communication network factor 1 involved_in ISO
IEA		 (PMID:20675382)
GO_REF:0000107		 RGD
Ensembl		 PMID:20675382 GO_REF:0000107 NCBI chr 2:234,562,410...234,565,370
Ensembl chr 2:234,562,408...234,565,484 		JBrowse link
G Ccn4 cellular communication network factor 4 involved_in ISO
IEA		 (PMID:20684029)
GO_REF:0000107		 RGD
Ensembl		 PMID:20684029 GO_REF:0000107 NCBI chr 7:98,645,238...98,677,253
Ensembl chr 7:98,645,182...98,677,248 		JBrowse link
G Cd276 Cd276 molecule acts_upstream_of_or_within ISO MGI:3033707 (PMID:15317945) RGD PMID:15317945 NCBI chr 8:58,937,751...58,968,082
Ensembl chr 8:58,937,751...58,968,380 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha acts_upstream_of_or_within ISO (PMID:15175325) RGD PMID:15175325 NCBI chr 1:87,759,631...87,762,303
Ensembl chr 1:87,759,433...87,762,412 		JBrowse link
G Cebpb CCAAT/enhancer binding protein beta involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15175325)		 Ensembl
RGD		 PMID:15175325 GO_REF:0000107 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473 		JBrowse link
G Cebpd CCAAT/enhancer binding protein delta acts_upstream_of_or_within ISO (PMID:15175325) RGD PMID:15175325 NCBI chr11:84,764,670...84,765,808
Ensembl chr11:84,764,565...84,765,829 		JBrowse link
G Clic1 chloride intracellular channel 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:19703605)		 Ensembl
RGD		 PMID:19703605 GO_REF:0000107 NCBI chr20:3,764,867...3,773,711
Ensembl chr20:3,761,461...3,773,712 		JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3830252 (PMID:18779865)		 Ensembl
RGD		 PMID:18779865 GO_REF:0000107 NCBI chr 7:70,122,474...70,132,756
Ensembl chr 7:70,122,474...70,132,756 		JBrowse link
G Ctnnb1 catenin beta 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2148591|MGI:2148594|MGI:2450929 (PMID:15866163)		 Ensembl
RGD		 PMID:15866163 GO_REF:0000107 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ctnnbip1 catenin, beta-interacting protein 1 involved_in ISO (PMID:18977368) RGD PMID:18977368 NCBI chr 5:159,961,961...160,010,942
Ensembl chr 5:159,961,928...160,010,939 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Dlx5 distal-less homeobox 5 IMP RGD PMID:12815054 RGD:1298882 NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407 		JBrowse link
G Dnai3 dynein axonemal intermediate chain 3 involved_in ISO (MGI:6450489|PMID:25498833) RGD PMID:25498833 MGI:6450489 NCBI chr 2:234,947,910...235,006,173
Ensembl chr 2:234,929,677...235,006,173 		JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase acts_upstream_of_or_within ISO (PMID:22615579) RGD PMID:22615579 NCBI chr12:15,826,864...15,885,423
Ensembl chr12:15,826,871...15,884,543 		JBrowse link
G Fbn2 fibrillin 2 involved_in ISO (MGI:4836762|PMID:20855508) RGD PMID:20855508 MGI:4836762 NCBI chr18:51,499,670...51,703,976
Ensembl chr18:51,499,737...51,703,976 		JBrowse link
G Fbxo5 F-box protein 5 involved_in ISO (PMID:29850565) RGD PMID:29850565 NCBI chr 1:42,196,068...42,202,437
Ensembl chr 1:42,196,068...42,202,437 		JBrowse link
G Fermt2 FERM domain containing kindlin 2 involved_in ISO (PMID:29496737)
(MGI:6149626|PMID:29496737)		 RGD PMID:29496737 MGI:6149626 NCBI chr15:18,682,927...18,751,959
Ensembl chr15:18,682,927...18,751,811 		JBrowse link
G Ffar4 free fatty acid receptor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:6220333|PMID:26365922)		 UniProt
RGD		 PMID:26365922 GO_REF:0000024 MGI:6220333 NCBI chr 1:235,873,576...235,891,597
Ensembl chr 1:235,873,576...235,891,597 		JBrowse link
G Fgf2 fibroblast growth factor 2 acts_upstream_of_or_within ISO MGI:95729 (PMID:20570969) RGD PMID:20570969 NCBI chr 2:120,236,328...120,290,673
Ensembl chr 2:120,236,328...120,291,221 		JBrowse link
G Fzd1 frizzled class receptor 1 involved_in ISO (PMID:20039315) RGD PMID:20039315 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Gdf10 growth differentiation factor 10 involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12559390 GO_REF:0000033, RGD:2316372 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343 		JBrowse link
G Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 acts_upstream_of_or_within ISO (PMID:12933806) RGD PMID:12933806 NCBI chr  X:65,826,273...65,835,361
Ensembl chr  X:65,826,574...65,835,361 		JBrowse link
G Gli3 GLI family zinc finger 3 acts_upstream_of_or_within ISO MGI:1856276|MGI:95516 (PMID:20570969) RGD PMID:20570969 NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712 		JBrowse link
G Gnas GNAS complex locus involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3043361 (PMID:15797856)		 Ensembl
RGD		 PMID:15797856 GO_REF:0000107 NCBI chr 3:163,071,003...163,136,350
Ensembl chr 3:163,071,417...163,127,262
Ensembl chr 3:163,071,417...163,127,262 		JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 acts_upstream_of_or_within ISO MGI:1321394|MGI:99829 (PMID:18986983) RGD PMID:18986983 NCBI chr 2:93,096,605...93,100,316
Ensembl chr 2:93,095,498...93,100,312 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 involved_in ISO (PMID:22634173) RGD PMID:22634173 NCBI chr 1:196,067,163...196,069,169
Ensembl chr 1:196,067,963...196,069,169 		JBrowse link
G Igf1 insulin-like growth factor 1 involved_in IDA
IEA
ISO		 GO_REF:0000107
(PMID:16433617)		 Ensembl
RGD		 PMID:16433617 PMID:16897348 GO_REF:0000107, RGD:1598452 NCBI chr 7:22,282,895...22,361,972
Ensembl chr 7:22,282,930...22,359,296 		JBrowse link
G Il6 interleukin 6 involved_in ISO (PMID:30545407) RGD PMID:30545407 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178 		JBrowse link
G Il6st interleukin 6 cytokine family signal transducer involved_in ISO
IEA		 (PMID:12372336)
GO_REF:0000107		 RGD
Ensembl		 PMID:12372336 GO_REF:0000107 NCBI chr 2:44,065,979...44,106,255
Ensembl chr 2:44,066,130...44,109,936 		JBrowse link
G Ilk integrin-linked kinase involved_in ISO
IEA		 (MGI:5009350|PMID:20675382)
GO_REF:0000107		 RGD
Ensembl		 PMID:20675382 GO_REF:0000107 MGI:5009350 NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140 		JBrowse link
G Jag1 jagged canonical Notch ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:23980096)		 Ensembl
RGD		 PMID:23980096 GO_REF:0000107 NCBI chr 3:124,406,783...124,442,220
Ensembl chr 3:124,406,794...124,442,209 		JBrowse link
G Jund JunD proto-oncogene, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1316736 (PMID:15563473)		 Ensembl
RGD		 PMID:15563473 GO_REF:0000107 NCBI chr16:18,734,121...18,735,799
Ensembl chr16:18,734,122...18,735,799 		JBrowse link
G Lmna lamin A/C IMP RGD PMID:22119912 RGD:10003161 NCBI chr 2:173,939,751...173,960,423
Ensembl chr 2:173,939,751...173,960,423 		JBrowse link
G Lrp3 LDL receptor related protein 3 involved_in ISO
IEA		 (PMID:28340487)
GO_REF:0000107		 RGD
Ensembl		 PMID:28340487 GO_REF:0000107 NCBI chr 1:87,843,815...87,859,147
Ensembl chr 1:87,844,868...87,859,110 		JBrowse link
G Lrp5 LDL receptor related protein 5 involved_in ISO (MGI:6162346|PMID:26891291) RGD PMID:26891291 MGI:6162346 NCBI chr 1:200,814,247...200,917,581
Ensembl chr 1:200,814,250...200,917,581 		JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:15166119) RGD PMID:15166119 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795 		JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO		 GO_REF:0000024
(MGI:5285459|PMID:21652706)		 UniProt
RGD		 PMID:21652706 GO_REF:0000024 MGI:5285459 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880 		JBrowse link
G Men1 menin 1 acts_upstream_of_or_within ISO MGI:88177 (PMID:15150273) RGD PMID:15150273 NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871 		JBrowse link
G Mir200c microRNA 200c involved_in ISO (PMID:27529418) RGD PMID:27529418 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir20a microRNA 20a acts_upstream_of ISO (PMID:21743293) RGD PMID:21743293 NCBI chr15:92,181,084...92,181,168
Ensembl chr15:92,181,084...92,181,168 		JBrowse link
G Mir20b microRNA 20b acts_upstream_of ISO (PMID:21042576) RGD PMID:21042576 NCBI chr  X:132,422,211...132,422,282
Ensembl chr  X:132,422,211...132,422,282 		JBrowse link
G Mir21 microRNA 21 involved_in ISO (PMID:23239100) RGD PMID:23239100 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348 		JBrowse link
G Mir210 microRNA 210 involved_in
acts_upstream_of_or_within		 ISO (PMID:26780211)
(PMID:19520079)		 RGD PMID:19520079 PMID:26780211 NCBI chr 1:196,326,343...196,326,452
Ensembl chr 1:196,326,337...196,326,454 		JBrowse link
G Mnda myeloid cell nuclear differentiation antigen acts_upstream_of_or_within ISO MGI:88177 (PMID:15557274) RGD PMID:15557274 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201 		JBrowse link
G Msx2 msh homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:15175325)		 Ensembl
RGD		 PMID:15175325 GO_REF:0000107 NCBI chr17:11,097,214...11,102,879
Ensembl chr17:11,097,103...11,102,879 		JBrowse link
G Nell1 neural EGFL like 1 involved_in ISO
ISS		 (PMID:21723284)
GO_REF:0000024		 RGD
UniProt		 PMID:21723284 GO_REF:0000024 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860 		JBrowse link
G Npnt nephronectin involved_in ISO (MGI:4414689|PMID:19944102), (MGI:5285024|PMID:21689636) RGD PMID:19944102 PMID:21689636 MGI:4414689 MGI:5285024 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401 		JBrowse link
G Nppc natriuretic peptide C IDA RGD PMID:17562543 RGD:1642298 NCBI chr 9:87,320,051...87,324,251
Ensembl chr 9:87,320,051...87,324,251 		JBrowse link
G Pdlim7 PDZ and LIM domain 7 IDA RGD PMID:9832452 RGD:632731 NCBI chr17:9,124,565...9,139,814
Ensembl chr17:9,124,649...9,139,811 		JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha involved_in ISS
ISO		 GO_REF:0000024
(MGI:3610779|PMID:16286645)		 UniProt
RGD		 PMID:16286645 GO_REF:0000024 MGI:3610779 NCBI chr 2:225,165,981...225,440,978
Ensembl chr 2:225,165,766...225,438,974 		JBrowse link
G Prkd1 protein kinase D1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:5306577|PMID:19029091)		 UniProt
RGD		 PMID:19029091 GO_REF:0000024 MGI:5306577 NCBI chr 6:67,725,193...68,039,002
Ensembl chr 6:67,725,905...68,039,042 		JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:14751573 RGD:10043372 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO
ISS		 GO_REF:0000107
MGI:1316736|MGI:1341800 (PMID:15150273), (PMID:15175325), (PMID:18986983)
(PMID:28703881)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:15150273 PMID:15175325 PMID:18986983 PMID:28703881 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Scube2 signal peptide, CUB domain and EGF like domain containing 2 acts_upstream_of_or_within ISO MGI:5698367|MGI:96533 (PMID:25639508) RGD PMID:25639508 NCBI chr 1:163,831,876...163,899,925
Ensembl chr 1:163,832,015...163,899,393 		JBrowse link
G Scube3 signal peptide, CUB domain and EGF like domain containing 3 involved_in ISO (PMID:33308444)
(MGI:6716484|PMID:33308444)		 RGD PMID:33308444 MGI:6716484 NCBI chr20:6,199,182...6,231,100
Ensembl chr20:6,199,182...6,228,584 		JBrowse link
G Sfrp2 secreted frizzled-related protein 2 acts_upstream_of_or_within ISO MGI:98956 (PMID:18166153) RGD PMID:18166153 NCBI chr 2:169,089,517...169,097,064
Ensembl chr 2:169,089,517...169,097,063 		JBrowse link
G Smad1 SMAD family member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1316736 (PMID:15150273)		 Ensembl
RGD		 PMID:15150273 GO_REF:0000107 NCBI chr19:28,513,130...28,573,665
Ensembl chr19:28,513,131...28,573,651 		JBrowse link
G Smad5 SMAD family member 5 involved_in
acts_upstream_of_or_within		 ISO (PMID:32271402)
MGI:1316736 (PMID:15150273)		 RGD PMID:15150273 PMID:32271402 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Sox11 SRY-box transcription factor 11 involved_in ISS
ISO		 GO_REF:0000024
(PMID:20626275)		 UniProt
RGD		 PMID:20626275 GO_REF:0000024 NCBI chr 6:44,008,333...44,010,354
Ensembl chr 6:44,008,340...44,010,354 		JBrowse link
G Suco SUN domain containing ossification factor involved_in IEA
ISO
ISS		 GO_REF:0000107
(MGI:4452525|PMID:20440000)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:20440000 GO_REF:0000024 GO_REF:0000107 MGI:4452525 NCBI chr13:74,192,808...74,257,896
Ensembl chr13:74,193,573...74,257,896 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in ISO (MGI:6717031|PMID:33882302) RGD PMID:33882302 MGI:6717031 NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
G Tmem119 transmembrane protein 119 involved_in ISO
IBA		 (PMID:20025746)
GO_REF:0000033
(MGI:4418582|PMID:20025746), (MGI:5543589|PMID:22416756), (MGI:6294241|PMID:22579779)		 RGD
GO_Central		 PMID:20025746 PMID:22416756 PMID:22579779 GO_REF:0000033 MGI:4418582 MGI:5543589 MGI:6294241 NCBI chr12:42,828,621...42,835,678
Ensembl chr12:42,828,418...42,835,689 		JBrowse link
G Tp63 tumor protein p63 involved_in ISO (PMID:22521434) RGD PMID:22521434 NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398 		JBrowse link
G Vegfa vascular endothelial growth factor A acts_upstream_of_or_within ISO MGI:1931048 (PMID:22886301) RGD PMID:22886301 NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641 		JBrowse link
G Wnt10b Wnt family member 10B acts_upstream_of_or_within ISO (PMID:15728361), (PMID:19723499) RGD PMID:15728361 PMID:19723499 NCBI chr 7:129,922,088...129,927,892
Ensembl chr 7:129,922,088...129,927,892 		JBrowse link
G Wnt3 Wnt family member 3 involved_in ISO (PMID:20039315) RGD PMID:20039315 NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099 		JBrowse link
G Wnt4 Wnt family member 4 involved_in ISO (PMID:17720811) RGD PMID:17720811 NCBI chr 5:149,513,573...149,535,415
Ensembl chr 5:149,514,018...149,532,859 		JBrowse link
G Wnt7b Wnt family member 7B acts_upstream_of_or_within ISO (PMID:15576404) RGD PMID:15576404 NCBI chr 7:116,634,817...116,679,459
Ensembl chr 7:116,634,814...116,679,581 		JBrowse link
G Wwtr1 WW domain containing transcription regulator 1 involved_in ISO UniProtKB:Q96AC1 (PMID:29496737) RGD PMID:29496737 NCBI chr 2:141,651,159...141,766,919
Ensembl chr 2:141,648,108...141,766,968 		JBrowse link
G Yap1 Yes1 associated transcriptional regulator involved_in ISO
IEA		 (PMID:29496737)
GO_REF:0000107		 RGD
Ensembl		 PMID:29496737 GO_REF:0000107 NCBI chr 8:5,095,705...5,166,808
Ensembl chr 8:5,095,722...5,167,010 		JBrowse link
G Zhx3 zinc fingers and homeoboxes 3 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:21174497)		 UniProt
Ensembl
RGD		 PMID:21174497 GO_REF:0000024 GO_REF:0000107 NCBI chr 3:149,417,787...149,548,671
Ensembl chr 3:149,417,818...149,527,079 		JBrowse link
regulation of bone mineralization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankh ANKH inorganic pyrophosphate transport regulator acts_upstream_of_or_within
involved_in		 TAS
ISO
IEA
ISS		 MGI:1856651 (PMID:10894769), (PMID:7276519)
(MGI:6448251|PMID:32639996)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:7276519 PMID:10894769 PMID:32639996 PMID:12861042 GO_REF:0000024 GO_REF:0000107 MGI:6448251, RGD:634632 NCBI chr 2:78,153,027...78,280,181
Ensembl chr 2:78,153,026...78,280,187 		JBrowse link
G Bglap bone gamma-carboxyglutamate protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 2:173,838,518...173,839,495
Ensembl chr 2:173,838,518...173,839,495 		JBrowse link
G Bmp2k BMP-2 inducible kinase involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:11500515)		 GO_Central
RGD		 PMID:11500515 GO_REF:0000033 NCBI chr14:12,481,194...12,579,411
Ensembl chr14:12,484,729...12,579,134 		JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:21350216)		 Ensembl
RGD		 PMID:21350216 GO_REF:0000107 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 involved_in ISO
IEA		 (PMID:9415400)
GO_REF:0000107		 RGD
Ensembl		 PMID:9415400 GO_REF:0000107 NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241 		JBrowse link
G Ddr2 discoidin domain receptor tyrosine kinase 2 involved_in ISO (PMID:20564243) RGD PMID:20564243 NCBI chr13:82,193,623...82,318,229
Ensembl chr13:82,195,463...82,317,363 		JBrowse link
G Dmp1 dentin matrix acidic phosphoprotein 1 TAS RGD PMID:8509401 RGD:728616 NCBI chr14:5,528,441...5,542,078
Ensembl chr14:5,528,431...5,539,323 		JBrowse link
G Ecm1 extracellular matrix protein 1 involved_in
acts_upstream_of_or_within		 IBA
ISO		 GO_REF:0000033
(PMID:20138147)		 GO_Central
RGD		 PMID:20138147 GO_REF:0000033 NCBI chr 2:183,287,491...183,292,729
Ensembl chr 2:183,287,322...183,292,671 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715 		JBrowse link
G Fgf23 fibroblast growth factor 23 acts_upstream_of_or_within ISO MGI:3512143 (PMID:15579309) RGD PMID:15579309 NCBI chr 4:159,914,267...159,923,821
Ensembl chr 4:159,914,272...159,923,821 		JBrowse link
G Gja1 gap junction protein, alpha 1 acts_upstream_of_or_within ISO MGI:2445468|MGI:3776013 (PMID:21346198) RGD PMID:21346198 NCBI chr20:35,756,007...35,768,481
Ensembl chr20:35,755,991...35,768,582 		JBrowse link
G Matn1 matrilin 1 acts_upstream_of_or_within ISO MGI:2153042|MGI:3663272 (PMID:16877353) RGD PMID:16877353 NCBI chr 5:143,117,198...143,127,140
Ensembl chr 5:143,117,504...143,127,059 		JBrowse link
G Mgp matrix Gla protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:169,766,290...169,769,612
Ensembl chr 4:169,766,279...169,769,667 		JBrowse link
G Nbr1 NBR1, autophagy cargo receptor involved_in IEA
ISO		 GO_REF:0000107
(MGI:4818844|PMID:20616007)		 Ensembl
RGD		 PMID:20616007 GO_REF:0000107 MGI:4818844 NCBI chr10:86,477,775...86,506,418
Ensembl chr10:86,478,290...86,506,412 		JBrowse link
G Notum NOTUM, palmitoleoyl-protein carboxylesterase acts_upstream_of_or_within ISO (PMID:30622831) RGD PMID:30622831 NCBI chr10:105,933,245...105,940,327
Ensembl chr10:105,933,249...105,940,315 		JBrowse link
G Omd osteomodulin NAS RGD PMID:10607915 RGD:633418 NCBI chr17:15,060,217...15,068,441
Ensembl chr17:15,060,217...15,068,441 		JBrowse link
G S1pr1 sphingosine-1-phosphate receptor 1 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3839226|PMID:19204730)		 UniProt
RGD		 PMID:19204730 GO_REF:0000024 MGI:3839226 NCBI chr 2:203,624,752...203,629,110
Ensembl chr 2:203,621,587...203,629,681 		JBrowse link
G Sgms2 sphingomyelin synthase 2 involved_in ISO
IEA
ISS		 (PMID:30779713)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:30779713 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:219,889,809...219,967,704
Ensembl chr 2:219,893,572...219,967,546 		JBrowse link
G Suv39h1 SUV39H1 histone lysine methyltransferase acts_upstream_of_or_within ISO MGI:1890508 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:14,421,028...14,433,993
Ensembl chr  X:14,421,109...14,433,982 		JBrowse link
G Suv39h1-ps1 SUV39H1 histone lysine methyltransferase, pseudogene 1 acts_upstream_of_or_within ISO MGI:1890508 (PMID:23695662) RGD PMID:23695662 NCBI chr  X:141,792,589...141,795,257 JBrowse link
G Twist1 twist family bHLH transcription factor 1 involved_in ISO (PMID:19597909) RGD PMID:19597909 NCBI chr 6:50,674,910...50,676,904
Ensembl chr 6:50,674,678...50,677,653 		JBrowse link
G Txlng taxilin gamma involved_in ISO (MGI:3587454|PMID:15911876), (MGI:5306578|PMID:19016261) RGD PMID:15911876 PMID:19016261 MGI:3587454 MGI:5306578 NCBI chr  X:31,864,111...31,912,931
Ensembl chr  X:31,864,111...31,912,926 		JBrowse link
G Zmpste24 zinc metallopeptidase STE24 acts_upstream_of_or_within ISO MGI:1099440 (PMID:23695662) RGD PMID:23695662 NCBI chr 5:134,627,218...134,660,360
Ensembl chr 5:134,627,229...134,660,110 		JBrowse link
regulation of ossification term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 involved_in ISO (PMID:16642017) RGD PMID:16642017 NCBI chr 3:42,978,558...43,097,892
Ensembl chr 3:42,978,561...43,098,241 		JBrowse link
G Ccdc134 coiled-coil domain containing 134 involved_in ISO (PMID:32181939) RGD PMID:32181939 NCBI chr 7:113,644,557...113,659,050
Ensembl chr 7:113,644,639...113,659,050 		JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 acts_upstream_of_or_within ISO MGI:4438907 (PMID:19767743) RGD PMID:19767743 NCBI chr 3:77,952,589...77,993,513
Ensembl chr 3:77,952,540...77,993,456 		JBrowse link
G Csf1 colony stimulating factor 1 acts_upstream_of_or_within ISO MGI:1856333 (PMID:12865350) RGD PMID:12865350 NCBI chr 2:195,377,215...195,396,608
Ensembl chr 2:195,377,215...195,411,704 		JBrowse link
G Dhrs3 dehydrogenase/reductase 3 acts_upstream_of_or_within ISO MGI:5007106 (PMID:24005908) RGD PMID:24005908 NCBI chr 5:156,747,939...156,782,420
Ensembl chr 5:156,747,962...156,782,417 		JBrowse link
G Egr2 early growth response 2 acts_upstream_of_or_within ISO MGI:1857507 (PMID:8565822) RGD PMID:8565822 NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562 		JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:12193582 RGD:625668 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268 		JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 acts_upstream_of_or_within ISO MGI:2135670 (PMID:20053668) RGD PMID:20053668 NCBI chr14:76,987,242...77,002,671
Ensembl chr14:76,987,993...77,003,341 		JBrowse link
G Gdf10 growth differentiation factor 10 IEP RGD PMID:12270110 RGD:632791 NCBI chr16:9,237,182...9,250,537
Ensembl chr16:9,237,261...9,249,343 		JBrowse link
G Intu inturned planar cell polarity protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:25774014)		 Ensembl
RGD		 PMID:25774014 GO_REF:0000107 NCBI chr 2:123,600,972...123,685,331
Ensembl chr 2:123,609,807...123,682,676 		JBrowse link
G Mapk1 mitogen activated protein kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1346859 (PMID:20053668)		 Ensembl
RGD		 PMID:20053668 GO_REF:0000107 NCBI chr11:83,957,813...84,023,629
Ensembl chr11:83,957,813...84,023,616 		JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
(PMID:20053668)		 Ensembl
RGD		 PMID:20053668 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589 		JBrowse link
G Mapk3 mitogen activated protein kinase 3 acts_upstream_of_or_within ISO MGI:1346858 (PMID:20053668) RGD PMID:20053668 NCBI chr 1:181,366,646...181,372,863
Ensembl chr 1:181,366,637...181,372,863 		JBrowse link
G P3h1 prolyl 3-hydroxylase 1 acts_upstream_of_or_within ISO MGI:4830452 (PMID:20363744) RGD PMID:20363744 NCBI chr 5:132,841,868...132,856,664
Ensembl chr 5:132,841,928...132,856,659 		JBrowse link
G Pbx1 PBX homeobox 1 acts_upstream_of_or_within ISO MGI:2155612 (PMID:11566859) RGD PMID:11566859 NCBI chr13:80,278,766...80,588,563
Ensembl chr13:80,278,770...80,588,594 		JBrowse link
G Prl prolactin IMP RGD PMID:17218965 RGD:1642577 NCBI chr17:37,859,999...37,870,062
Ensembl chr17:37,860,007...37,870,062 		JBrowse link
G Ptger4 prostaglandin E receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2137851 (PMID:10749873)		 Ensembl
RGD		 PMID:10749873 GO_REF:0000107 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IDA RGD PMID:10698968 RGD:631877 NCBI chr 6:43,046,514...43,059,737
Ensembl chr 6:43,047,658...43,059,699 		JBrowse link
G Runx2 RUNX family transcription factor 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:2176466 (PMID:10213384)		 Ensembl
RGD		 PMID:10213384 GO_REF:0000107 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Sfrp1 secreted frizzled-related protein 1 IMP RGD PMID:15677765 RGD:1580305 NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286 		JBrowse link
G Six2 SIX homeobox 2 involved_in ISO (MGI:4822095|PMID:20515681) RGD PMID:20515681 MGI:4822095 NCBI chr 6:8,974,859...8,981,345
Ensembl chr 6:8,967,157...8,981,193 		JBrowse link
G Smad5 SMAD family member 5 NAS RGD PMID:11920662 RGD:724455 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Tent5a terminal nucleotidyltransferase 5A involved_in ISO (MGI:5766096|PMID:26803617) RGD PMID:26803617 MGI:5766096 NCBI chr 8:86,222,294...86,229,045
Ensembl chr 8:86,225,357...86,229,045 		JBrowse link
regulation of osteoblast differentiation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway acts_upstream_of_or_within ISO MGI:1857966 (PMID:15802266) RGD PMID:15802266 NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696 		JBrowse link
G Atf4 activating transcription factor 4 involved_in ISS
ISO		 GO_REF:0000024
(MGI:3040115|PMID:15109498)
(PMID:15109498)		 UniProt
RGD		 PMID:15109498 GO_REF:0000024 MGI:3040115 NCBI chr 7:111,804,135...111,806,457
Ensembl chr 7:111,804,183...111,806,446 		JBrowse link
G Ctnnb1 catenin beta 1 acts_upstream_of_or_within ISO MGI:2148567|MGI:3044412 (PMID:15576404), (PMID:15802266) RGD PMID:15576404 PMID:15802266 NCBI chr 8:120,640,008...120,667,110
Ensembl chr 8:120,639,995...120,667,111 		JBrowse link
G Ddx5 DEAD-box helicase 5 involved_in ISO (MGI:5315698|PMID:17960593) RGD PMID:17960593 MGI:5315698 NCBI chr10:91,723,508...91,732,210
Ensembl chr10:91,723,508...91,732,283 		JBrowse link
G Esrra estrogen related receptor, alpha IMP RGD PMID:11381083 RGD:1625633 NCBI chr 1:204,104,100...204,114,182
Ensembl chr 1:204,104,101...204,114,268 		JBrowse link
G Fzd1 frizzled class receptor 1 IEP RGD PMID:1334084 RGD:61590 NCBI chr 4:29,310,303...29,314,701
Ensembl chr 4:29,310,091...29,312,643
Ensembl chr 4:29,310,091...29,312,643 		JBrowse link
G Gli1 GLI family zinc finger 1 involved_in ISO (MGI:5429486|PMID:22493482) RGD PMID:22493482 MGI:5429486 NCBI chr 7:63,156,926...63,169,579
Ensembl chr 7:63,156,926...63,169,251 		JBrowse link
G Gsk3b glycogen synthase kinase 3 beta IMP RGD PMID:28731198 RGD:13792731 NCBI chr11:62,498,997...62,648,665
Ensembl chr11:62,504,316...62,648,646 		JBrowse link
G Hemgn hemogen involved_in IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:11161722 GO_REF:0000033, RGD:632552 NCBI chr 5:60,679,633...60,698,597
Ensembl chr 5:60,679,633...60,698,669 		JBrowse link
G Mir188 microRNA 188 acts_upstream_of_or_within ISO (PMID:25751060) RGD PMID:25751060 NCBI chr  X:15,247,715...15,247,794
Ensembl chr  X:15,247,715...15,247,794 		JBrowse link
G Nell1 neural EGFL like 1 involved_in IMP
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:12235118 GO_REF:0000033, RGD:633405 NCBI chr 1:99,709,305...100,573,872
Ensembl chr 1:99,709,793...100,573,860 		JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha involved_in ISO
IEA		 (PMID:19949837)
GO_REF:0000107		 RGD
Ensembl		 PMID:19949837 GO_REF:0000107 NCBI chr19:24,155,081...24,178,430
Ensembl chr19:24,155,090...24,178,430 		JBrowse link
G Ptk2 protein tyrosine kinase 2 involved_in ISS
ISO		 GO_REF:0000024
(PMID:16927379)		 UniProt
RGD		 PMID:16927379 GO_REF:0000024 NCBI chr 7:105,126,725...105,331,848
Ensembl chr 7:105,126,728...105,331,783 		JBrowse link
G Rassf2 Ras association domain family member 2 acts_upstream_of_or_within ISO MGI:5314787 (PMID:22227519) RGD PMID:22227519 NCBI chr 3:119,244,288...119,280,462
Ensembl chr 3:119,245,821...119,280,431 		JBrowse link
G Rest RE1-silencing transcription factor involved_in ISS
ISO		 GO_REF:0000024
(MGI:5641106|PMID:25838543)		 UniProt
RGD		 PMID:25838543 GO_REF:0000024 MGI:5641106 NCBI chr14:30,859,109...30,879,828
Ensembl chr14:30,862,553...30,894,354 		JBrowse link
G Runx2 RUNX family transcription factor 2 acts_upstream_of_or_within TAS
ISO		 (PMID:21628588) RGD PMID:21628588 PMID:9651525 RGD:69800 NCBI chr 9:16,167,504...16,492,826
Ensembl chr 9:16,167,482...16,492,167 		JBrowse link
G Smoc1 SPARC related modular calcium binding 1 involved_in ISO (PMID:20359165) RGD PMID:20359165 NCBI chr 6:100,701,330...100,897,441
Ensembl chr 6:100,701,346...100,862,699 		JBrowse link
G Snai2 snail family transcriptional repressor 2 involved_in ISO (PMID:19756381), (PMID:21182836) RGD PMID:19756381 PMID:21182836 NCBI chr11:86,182,788...86,186,203
Ensembl chr11:86,181,909...86,186,200 		JBrowse link
G Tcirg1 T-cell immune regulator 1, ATPase H+ transporting V0 subunit A3 acts_upstream_of_or_within ISO MGI:1856973 (PMID:22351931) RGD PMID:22351931 NCBI chr 1:201,127,034...201,138,787
Ensembl chr 1:201,127,034...201,138,742 		JBrowse link
G Ucma upper zone of growth plate and cartilage matrix associated involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr17:73,293,977...73,303,709
Ensembl chr17:73,293,978...73,303,611 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19692
    multicellular organismal process 8810
      ossification 515
        bone mineralization + 142
        direct ossification + 7
        intratendonous ossification 1
        ligamentous ossification 2
        negative regulation of ossification + 48
        ossification involved in bone maturation + 28
        ossification involved in bone remodeling 3
        osteoblast differentiation + 261
        positive regulation of ossification + 62
        regulation of ossification + 143
        replacement ossification + 38
paths to the root