Gene: Chsy1 (chondroitin sulfate synthase 1) Rattus norvegicus
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Symbol: Chsy1
Name: chondroitin sulfate synthase 1
Description: ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); transferase activity, transferring glycosyl groups (ortholog); INVOLVED IN response to nutrient levels; bone morphogenesis (ortholog); cartilage development (ortholog); PARTICIPATES IN chondroitin sulfate biosynthetic pathway; ASSOCIATED WITH Liver Cirrhosis, Experimental (ortholog); Temtamy Preaxial Brachydactyly Syndrome (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1-naphthyl isothiocyanate; 3',5'-cyclic AMP
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: carbohydrate (chondroitin) synthase 1; LOC292999
Orthologs:
Allele / Splice: Chsy1Tn(sb-T2/Bart3)2.165Mcwi  
Genetic Models: F344-Chsy1Tn(sb-T2/Bart3)2.165Mcwi
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01127,010,587 - 127,071,570 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01128,095,353 - 128,156,041 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41120,539,002 - 120,600,102 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11120,616,912 - 120,677,080 (+)NCBI
Celera1111,901,152 - 111,961,962 (+)NCBI
Cytogenetic Map1q22NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Genetic Models
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
 
More on Chsy1
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 1311904
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2016-11-18
Status: ACTIVE