Asxl2 (ASXL transcriptional regulator 2) - Rat Genome Database

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Gene: Asxl2 (ASXL transcriptional regulator 2) Rattus norvegicus
Analyze
Symbol: Asxl2
Name: ASXL transcriptional regulator 2
RGD ID: 1304710
Description: Predicted to enable chromatin binding activity and peroxisome proliferator activated receptor binding activity. Involved in positive regulation of lipid storage. Predicted to be located in nucleoplasm. Predicted to be part of PR-DUB complex. Orthologous to human ASXL2 (ASXL transcriptional regulator 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; gentamycin; valproic acid.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: additional sex combs like 2; additional sex combs like 2 (Drosophila); additional sex combs like 2, transcriptional regulator; additional sex combs like transcriptional regulator 2; LOC313922; putative Polycomb group protein ASXL2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8632,090,497 - 32,234,487 (+)NCBIGRCr8
mRatBN7.2626,425,017 - 26,514,899 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0627,835,346 - 27,919,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0637,644,433 - 37,732,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4626,400,855 - 26,482,465 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1626,470,864 - 26,484,531 (+)NCBI
Celera625,902,447 - 25,987,120 (+)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Reciprocal regulation of LXRα activity by ASXL1 and ASXL2 in lipogenesis. Park UH, etal., Biochem Biophys Res Commun. 2014 Jan 10;443(2):489-94. doi: 10.1016/j.bbrc.2013.11.124. Epub 2013 Dec 7.
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:19270745   PMID:20577743   PMID:21047783   PMID:21490954   PMID:23046516   PMID:24860998  


Genomics

Comparative Map Data
Asxl2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8632,090,497 - 32,234,487 (+)NCBIGRCr8
mRatBN7.2626,425,017 - 26,514,899 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.0627,835,346 - 27,919,285 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0637,644,433 - 37,732,264 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4626,400,855 - 26,482,465 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1626,470,864 - 26,484,531 (+)NCBI
Celera625,902,447 - 25,987,120 (+)NCBICelera
Cytogenetic Map6q14NCBI
ASXL2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38225,733,753 - 25,878,487 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl225,733,753 - 25,878,487 (-)EnsemblGRCh38hg38GRCh38
GRCh37225,956,622 - 26,101,356 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36225,815,757 - 25,954,816 (-)NCBINCBI36Build 36hg18NCBI36
Build 34225,873,909 - 26,013,007NCBI
Celera225,802,588 - 25,941,650 (-)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef225,699,339 - 25,838,712 (-)NCBIHuRef
CHM1_1225,891,914 - 26,030,899 (-)NCBICHM1_1
T2T-CHM13v2.0225,769,050 - 25,913,813 (-)NCBIT2T-CHM13v2.0
Asxl2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39123,476,892 - 3,560,811 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl123,476,857 - 3,556,852 (+)EnsemblGRCm39 Ensembl
GRCm38123,426,857 - 3,510,811 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl123,426,857 - 3,506,852 (+)EnsemblGRCm38mm10GRCm38
MGSCv37123,426,884 - 3,506,849 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36123,426,901 - 3,502,468 (+)NCBIMGSCv36mm8
Celera123,353,949 - 3,434,249 (+)NCBICelera
Cytogenetic Map12A1.1NCBI
cM Map121.81NCBI
Asxl2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554697,786,154 - 7,923,500 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554697,786,030 - 7,923,739 (-)NCBIChiLan1.0ChiLan1.0
ASXL2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v212100,638,203 - 100,792,850 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A100,642,167 - 100,796,817 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A25,730,155 - 25,880,089 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A25,824,278 - 25,973,659 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A25,832,527 - 25,973,659 (-)Ensemblpanpan1.1panPan2
ASXL2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11719,914,026 - 20,065,141 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1719,895,568 - 20,044,691 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1719,810,081 - 19,960,956 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01720,235,589 - 20,386,543 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1720,244,106 - 20,366,511 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11719,923,297 - 20,074,379 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01719,932,920 - 20,084,155 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01719,978,936 - 20,130,179 (-)NCBIUU_Cfam_GSD_1.0
Asxl2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629264,237,321 - 64,375,709 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364936,463,744 - 6,594,252 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364936,463,771 - 6,602,244 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ASXL2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3113,044,836 - 113,180,742 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13113,044,788 - 113,184,809 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23119,991,762 - 120,173,786 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ASXL2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11481,770,068 - 81,919,200 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604530,233,714 - 30,387,990 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Asxl2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247387,603,252 - 8,100,369 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247387,958,610 - 8,100,223 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Asxl2
711 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:42
Count of miRNA genes:20
Interacting mature miRNAs:21
Transcripts:ENSRNOT00000015827, ENSRNOT00000061505
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat

Markers in Region
BF404323  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,425,745 - 26,425,935 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,324 - 27,835,513NCBIRnor6.0
Rnor_5.0637,645,596 - 37,645,785UniSTSRnor5.0
RGSC_v3.4626,400,946 - 26,401,135UniSTSRGSC3.4
Celera625,902,425 - 25,902,614UniSTS
RH 3.4 Map6117.39UniSTS
Cytogenetic Map6q14UniSTS
BF399538  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,425,599 - 26,425,768 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,178 - 27,835,346NCBIRnor6.0
Rnor_5.0637,645,450 - 37,645,618UniSTSRnor5.0
RGSC_v3.4626,400,800 - 26,400,968UniSTSRGSC3.4
Celera625,902,279 - 25,902,447UniSTS
RH 3.4 Map6116.9UniSTS
Cytogenetic Map6q14UniSTS
AU048346  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0627,856,385 - 27,856,508NCBIRnor6.0
Rnor_5.0637,666,657 - 37,666,780UniSTSRnor5.0
RGSC_v3.4626,422,007 - 26,422,131UniSTSRGSC3.4
Celera625,923,486 - 25,923,610UniSTS
Cytogenetic Map6q14UniSTS
RH140747  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2626,426,076 - 26,426,222 (+)MAPPERmRatBN7.2
Rnor_6.0627,835,655 - 27,835,800NCBIRnor6.0
Rnor_5.0637,645,927 - 37,646,072UniSTSRnor5.0
RGSC_v3.4626,401,277 - 26,401,422UniSTSRGSC3.4
Celera625,902,756 - 25,902,901UniSTS
RH 3.4 Map6117.5UniSTS
Cytogenetic Map6q14UniSTS
Asxl2DS-g-a-48f06_r1_177  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.4626,458,168 - 26,458,168 (+)RGDRGSC3.4


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 1 25 31 15 19 15 1 1 48 28 40 11 1
Low 2 17 26 26 26 7 9 26 7 1 7
Below cutoff 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003754155 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003754156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006225713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008764543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008776194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ233753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ234980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000015827   ⟹   ENSRNOP00000015827
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl626,460,689 - 26,507,477 (+)Ensembl
Rnor_6.0 Ensembl627,887,797 - 27,915,563 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000105980   ⟹   ENSRNOP00000081020
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl626,425,954 - 26,507,477 (+)Ensembl
RefSeq Acc Id: XM_063262610   ⟹   XP_063118680
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262611   ⟹   XP_063118681
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262612   ⟹   XP_063118682
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,090,497 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262613   ⟹   XP_063118683
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,160,204 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262614   ⟹   XP_063118684
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262615   ⟹   XP_063118685
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262616   ⟹   XP_063118686
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,740 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262617   ⟹   XP_063118687
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,168,738 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262618   ⟹   XP_063118688
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,174,354 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262619   ⟹   XP_063118689
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,200,678 - 32,234,487 (+)NCBI
RefSeq Acc Id: XM_063262620   ⟹   XP_063118690
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,213,209 - 32,234,487 (+)NCBI
RefSeq Acc Id: XR_010052213
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8632,144,276 - 32,234,487 (+)NCBI
RefSeq Acc Id: ENSRNOP00000015827   ⟸   ENSRNOT00000015827
RefSeq Acc Id: ENSRNOP00000081020   ⟸   ENSRNOT00000105980
RefSeq Acc Id: XP_063118682   ⟸   XM_063262612
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063118680   ⟸   XM_063262610
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063118681   ⟸   XM_063262611
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063118683   ⟸   XM_063262613
- Peptide Label: isoform X3
RefSeq Acc Id: XP_063118687   ⟸   XM_063262617
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063118686   ⟸   XM_063262616
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063118685   ⟸   XM_063262615
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063118684   ⟸   XM_063262614
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063118688   ⟸   XM_063262618
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063118689   ⟸   XM_063262619
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063118690   ⟸   XM_063262620
- Peptide Label: isoform X6
Protein Domains
DEUBAD

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z8N9-F1-model_v2 AlphaFold D3Z8N9 1-1225 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1304710 AgrOrtholog
BioCyc Gene G2FUF-38293 BioCyc
Ensembl Genes ENSRNOG00000011908 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000015827.9 UniProtKB/TrEMBL
  ENSRNOT00000105980.1 UniProtKB/TrEMBL
InterPro ASX-like_PHD UniProtKB/TrEMBL
  ASX/ASX-like UniProtKB/TrEMBL
  ASXH UniProtKB/TrEMBL
  DEUBAD_dom UniProtKB/TrEMBL
NCBI Gene 313922 ENTREZGENE
PANTHER PTHR13578 UniProtKB/TrEMBL
  PTHR13578:SF11 UniProtKB/TrEMBL
Pfam ASXH UniProtKB/TrEMBL
  PHD_3 UniProtKB/TrEMBL
PhenoGen Asxl2 PhenoGen
PROSITE DEUBAD UniProtKB/TrEMBL
RatGTEx ENSRNOG00000011908 RatGTEx
UniProt A0A8I5ZR15_RAT UniProtKB/TrEMBL
  D3Z8N9_RAT UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-05-18 Asxl2  ASXL transcriptional regulator 2  Asxl2  additional sex combs like 2, transcriptional regulator  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2015-12-02 Asxl2  additional sex combs like 2, transcriptional regulator  Asxl2  additional sex combs like transcriptional regulator 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2014-06-25 Asxl2  additional sex combs like transcriptional regulator 2  Asxl2  additional sex combs like 2 (Drosophila)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 Asxl2  additional sex combs like 2 (Drosophila)   Asxl2_predicted  additional sex combs like 2 (Drosophila) (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Asxl2_predicted  additional sex combs like 2 (Drosophila) (predicted)      Symbol and Name status set to approved 70820 APPROVED