Gene: Calca (calcitonin-related polypeptide alpha) Rattus norvegicus
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Symbol: Calca
Name: calcitonin-related polypeptide alpha
Description: ENCODES a protein that exhibits calcitonin receptor binding (ortholog); identical protein binding (ortholog); protein complex binding (ortholog); INVOLVED IN aging; cellular response to nerve growth factor stimulus; cellular response to tumor necrosis factor; ASSOCIATED WITH Diabetes Mellitus, Experimental; Diabetes Mellitus, Type 2; Hyperalgesia; FOUND IN axon; extracellular space; neuronal cell body; INTERACTS WITH (R)-adrenaline; (R)-noradrenaline; (S)-amphetamine
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: alpha-type CGRP; Cal1; CAL6; Calc; calcitonin; calcitonin gene-related peptide 1; calcitonin gene-related peptide I; calcitonin/calcitonin-related polypeptide, alpha; CGRP; CGRP-I; RATCAL6
Orthologs:
Is Marker For: Strains:   SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo  
QTLs:   Bp138  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01184,184,018 - 184,188,922 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01191,158,061 - 191,162,954 (-)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41172,686,168 - 172,691,061 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11172,824,299 - 172,827,127 (-)NCBI
Celera1166,711,610 - 166,716,491 (-)NCBI
Cytogenetic Map1q35NCBImapview
RH 3.4 Map11317.6RGD
RH 2.0 Map1757.3RGD
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Candidate Gene Status
Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
Related Rat Strains
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Calca
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
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RGD Object Information
RGD ID: 2254
Created: 2000-05-25
Species: Rattus norvegicus
Last Modified: 2016-11-18
Status: ACTIVE