Gene: Acan (aggrecan) Rattus norvegicus
Symbol: Acan
Name: aggrecan
Description: ENCODES a protein that exhibits calcium ion binding; INVOLVED IN cellular response to growth factor stimulus; central nervous system development; chondroblast differentiation; ASSOCIATED WITH Brain Injuries; Intervertebral Disc Degeneration; Spinal Cord Injuries; FOUND IN perineuronal net; basement membrane (ortholog); extracellular matrix (ortholog); INTERACTS WITH (R)-mevalonic acid; 2-amino-2-deoxy-D-glucopyranose; 6-propyl-2-thiouracil
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: Agc; Agc1; aggrecan 1; aggrecan core protein; aggrecan structural proteoglycan of cartilage; aggrecan, structural proteoglycan of cartilage; cartilage-specific proteoglycan core protein; CSPCP
Orthologs:
Homo sapiens : ACAN (aggrecan)  HGNC
Mus musculus : Acan (aggrecan)  MGI
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01140,762,758 - 140,824,441 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01141,732,130 - 141,793,202 (+)NCBIRnor5.0rn5Rnor5.0
RGSC_v3.41134,787,341 - 134,848,992 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11134,865,683 - 134,927,335 (+)NCBI
Celera1125,052,984 - 125,114,449 (+)NCBI
Cytogenetic Map1q31NCBImapview
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Acan
Entrez Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Map Viewer
Vista
Vista + UCSC

RGD Object Information
RGD ID: 68358
Created: 2001-07-11
Species: Rattus norvegicus
Last Modified: 2016-05-10
Status: ACTIVE