ONTOLOGY REPORT - ANNOTATIONS
Term: vitamin metabolic process
Accession: GO:0006766
browse the term
Definition: The chemical reactions and pathways involving vitamins. Vitamin is a general term for a number of unrelated organic substances that occur in many foods in small amounts and that are necessary in trace amounts for the normal metabolic functioning of the body. Vitamins may be water-soluble or fat-soluble and usually serve as components of coenzyme systems.
Synonyms: exact_synonym: vitamin metabolism
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Cubn
cubilin
TAS
RGD
PMID:11595644
RGD:628443
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
TAS ISO
(MGI:1331347|PMID:10052453)
RGD
PMID:10052453 PMID:11595644
MGI:1331347 , RGD:628443
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Btd
biotinidase
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:4888510 (MGI:4888153|PMID:21051254)
RGD
PMID:21051254 PMID:21873635
MGI:4888153 , RGD:13792537
NCBI chr16:6,863,068...6,894,345
Ensembl chr16:6,862,407...6,940,945
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Cyp27a1
cytochrome P450, family 27, subfamily a, polypeptide 1
involved_in
IBA IEA ISO
PMID:21873635 GO_REF:0000107 (PMID:15465040)
Ensembl RGD
PMID:15465040 PMID:21873635
GO_REF:0000107, RGD:13792537
NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551
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Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
ISO IEA IBA
(PMID:15795327), (PMID:16549446), (PMID:17023519), (PMID:22862690), (PMID:9415400) GO_REF:0000107 (MGI:3590419|PMID:15972816) PMID:21873635
RGD Ensembl
PMID:9415400 PMID:15795327 PMID:15972816 PMID:16549446 PMID:17023519 PMID:22862690 PMID:21873635 More...
GO_REF:0000107 MGI:3590419 , RGD:13792537
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Cyp2r1
cytochrome P450, family 2, subfamily r, polypeptide 1
involved_in acts_upstream_of_or_within
ISO
(PMID:15465040), (PMID:18511070) (MGI:2677973|PMID:12867411)
RGD
PMID:12867411 PMID:15465040 PMID:18511070
MGI:2677973
NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
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Cyp3a2
cytochrome P450, family 3, subfamily a, polypeptide 2
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008
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Cubn
cubilin
IMP
RGD
PMID:14576052
RGD:8554807
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Abcc1
ATP binding cassette subfamily C member 1
involved_in
ISO
MGI:2155908 (MGI:4436975|PMID:19897579)
RGD
PMID:19897579
MGI:4436975
NCBI chr10:528,961...655,179
Ensembl chr10:531,812...655,114
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Abcd4
ATP binding cassette subfamily D member 4
involved_in
ISO
(PMID:22922874) (PMID:22922874), (PMID:33845046)
RGD
PMID:22922874 PMID:33845046
NCBI chr 6:104,246,459...104,260,965
Ensembl chr 6:104,246,468...104,280,276
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Amn
amnion associated transmembrane protein
involved_in
ISO
(PMID:14576052)
RGD
PMID:14576052
NCBI chr 6:130,311,372...130,318,815
Ensembl chr 6:130,311,372...130,318,815
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Atic
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase
TAS
RGD
PMID:3994693
RGD:5135263
NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889
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Cblif
cobalamin binding intrinsic factor
involved_in
IDA ISO
MGI:4363945 (MGI:5586607|PMID:24911144), (MGI:6866947|PMID:14321840)
RGD
PMID:14321840 PMID:24911144 PMID:14166172
MGI:5586607 MGI:6866947 , RGD:1624368
NCBI chr 1:208,605,983...208,620,231
Ensembl chr 1:208,605,983...208,620,344
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Cd320
CD320 molecule
involved_in
ISO
MGI:3858540 (MGI:5506682|PMID:23430977)
RGD
PMID:23430977
MGI:5506682
NCBI chr 7:14,626,171...14,631,976
Ensembl chr 7:14,609,146...14,631,976
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Cubn
cubilin
involved_in
ISO IEA
(PMID:14576052) GO_REF:0000107
RGD Ensembl
PMID:14576052
GO_REF:0000107
NCBI chr17:76,385,046...76,593,133
Ensembl chr17:76,385,060...76,593,231
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Gart
phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
TAS
RGD
PMID:3994693
RGD:5135263
NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125
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Lmbrd1
LMBR1 domain containing 1
involved_in
ISO
(PMID:27456980)
RGD
PMID:27456980
NCBI chr 9:27,096,387...27,178,095
Ensembl chr 9:27,096,297...27,178,090
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Mmaa
metabolism of cobalamin associated A
involved_in
ISO
(PMID:31056463)
RGD
PMID:31056463
NCBI chr19:28,619,060...28,649,319
Ensembl chr19:28,619,087...28,649,319
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Mmab
metabolism of cobalamin associated B
involved_in
ISO
(PMID:12514191)
RGD
PMID:12514191
NCBI chr12:42,159,109...42,172,496
Ensembl chr12:42,159,089...42,172,490
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Mmachc
metabolism of cobalamin associated C
involved_in
ISO IBA
(PMID:19700356), (PMID:22642810), (PMID:23825108) PMID:21873635
RGD
PMID:19700356 PMID:22642810 PMID:23825108 PMID:21873635
RGD:13792537
NCBI chr 5:130,166,056...130,172,735
Ensembl chr 5:130,166,451...130,172,601
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Mmadhc
metabolism of cobalamin associated D
involved_in
IEA ISO ISS
GO_REF:0000002 (PMID:22156578), (PMID:24722857) GO_REF:0000024 (PMID:24722857)
InterPro RGD UniProt
PMID:22156578 PMID:24722857
GO_REF:0000002 GO_REF:0000024
NCBI chr 3:34,708,649...34,726,554
Ensembl chr 3:34,708,649...34,726,771
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Mtr
5-methyltetrahydrofolate-homocysteine methyltransferase
involved_in
ISO IEA
(PMID:23825108) GO_REF:0000107 MGI:2180496 (MGI:1930456|PMID:11158293)
RGD Ensembl
PMID:11158293 PMID:23825108
GO_REF:0000107 MGI:1930456
NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822
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Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
involved_in
ISO
(MGI:3710265|PMID:17369066)
RGD
PMID:17369066
MGI:3710265
NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
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Tcn2
transcobalamin 2
involved_in
ISO
(MGI:6223891|PMID:21655200), (MGI:6781201|PMID:237480)
RGD
PMID:237480 PMID:21655200
MGI:6223891 MGI:6781201
NCBI chr14:78,813,343...78,828,549
Ensembl chr14:78,813,343...78,828,489
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Mthfs
methenyltetrahydrofolate synthetase
involved_in
ISO
(PMID:12764149)
RGD
PMID:12764149
NCBI chr 8:89,729,498...89,801,998
Ensembl chr 8:89,729,508...89,799,089
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Pm20d2
peptidase M20 domain containing 2
NOT|involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:47,566,059...47,586,334
Ensembl chr 5:47,566,072...47,586,212
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Aldh1l1
aldehyde dehydrogenase 1 family, member L1
involved_in
IDA
PMID:1848231
UniProt
PMID:1848231
RGD:632027
NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465
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Aldh1l2
aldehyde dehydrogenase 1 family, member L2
involved_in
ISO
(MGI:6489626|PMID:33168096)
RGD
PMID:33168096
MGI:6489626
NCBI chr 7:20,254,196...20,305,793
Ensembl chr 7:20,254,233...20,305,776
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Dhfr
dihydrofolate reductase
involved_in
IBA IDA
PMID:21873635 PMID:20424322
GO_Central BHF-UCL
PMID:21873635 PMID:20424322
RGD:13792537 , RGD:10054082
NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713
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Folr1
folate receptor alpha
acts_upstream_of_or_within
ISO
MGI:2383986 (MGI:2669340|PMID:12854656)
RGD
PMID:12854656
MGI:2669340
NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667
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Gnmt
glycine N-methyltransferase
TAS
RGD
PMID:12054489
RGD:728472
NCBI chr 9:14,254,675...14,258,028
Ensembl chr 9:14,254,675...14,258,434
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Mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase
involved_in
ISO ISS
(PMID:11466310) GO_REF:0000024 (MGI:5512657|PMID:24074862)
RGD UniProt
PMID:11466310 PMID:24074862
GO_REF:0000024 MGI:5512657
NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425
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Shmt1
serine hydroxymethyltransferase 1
involved_in
IBA ISO
PMID:21873635 (PMID:11278996)
RGD
PMID:11278996 PMID:21873635
RGD:13792537
NCBI chr10:45,468,698...45,497,820
Ensembl chr10:45,468,700...45,497,820
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Shmt2
serine hydroxymethyltransferase 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236
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Akr1a1
aldo-keto reductase family 1 member A1
acts_upstream_of_or_within involved_in
ISO IMP
(MGI:3588122|PMID:15769935) PMID:22820017 MGI:4239556 (MGI:4834110|PMID:20410296)
RGD
PMID:15769935 PMID:20410296 PMID:22820017
MGI:3588122 MGI:4834110 , RGD:13825440
NCBI chr 5:130,092,945...130,130,277
Ensembl chr 5:130,092,732...130,113,674
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Akr1b1
aldo-keto reductase family 1 member B1
involved_in
ISO
MGI:5008171 (MGI:4834110|PMID:20410296)
RGD
PMID:20410296
MGI:4834110
NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157
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Gsto1
glutathione S-transferase omega 1
IMP
RGD
PMID:9786866
RGD:70644
NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
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Gulo
gulonolactone (L-) oxidase
involved_in
ISS IEA
GO_REF:0000024 GO_REF:0000107
UniProt Ensembl
GO_REF:0000024 GO_REF:0000107
NCBI chr15:40,205,677...40,227,766
Ensembl chr15:40,205,665...40,227,874
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Rgn
regucalcin
involved_in
IBA ISO ISS
PMID:21873635 MGI:2670511 (MGI:3623658|PMID:16585534), (MGI:5486063|PMID:23349732) (MGI:5486063|PMID:23349732) GO_REF:0000024
RGD UniProt
PMID:16585534 PMID:23349732 PMID:21873635
GO_REF:0000024 MGI:3623658 MGI:5486063 , RGD:13792537
NCBI chr X:1,619,030...1,634,456
Ensembl chr X:1,619,032...1,634,450
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Gclc
glutamate-cysteine ligase, catalytic subunit
acts_upstream_of_or_within
ISO
MGI:2429419 (MGI:1928560|PMID:11118286)
RGD
PMID:11118286
MGI:1928560
NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544
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Gsto1
glutathione S-transferase omega 1
involved_in
IEA IBA ISS ISO
GO_REF:0000107 PMID:21873635 GO_REF:0000024 (PMID:11511179)
Ensembl UniProt RGD
PMID:11511179 PMID:21873635
GO_REF:0000024 GO_REF:0000107, RGD:13792537
NCBI chr 1:246,721,089...246,731,228
Ensembl chr 1:246,721,221...246,731,468
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Gsto2
glutathione S-transferase omega 2
involved_in
ISO IBA ISS
(PMID:15970797) PMID:21873635 GO_REF:0000024
RGD UniProt
PMID:15970797 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 1:246,731,314...246,757,592
Ensembl chr 1:246,732,089...246,753,866
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Mir125a
microRNA 125a
IDA
RGD
PMID:27085842
RGD:26884454
NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
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Slc23a2
solute carrier family 23 member 2
involved_in
IMP IBA
PMID:21873635
RGD GO_Central
PMID:10331392 PMID:21873635
RGD:634186 , RGD:13792537
NCBI chr 3:119,302,651...119,395,289
Ensembl chr 3:119,302,666...119,460,343
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Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
ISO IEA
(PMID:16549446) GO_REF:0000107
RGD Ensembl
PMID:16549446
GO_REF:0000107
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Gfi1
growth factor independent 1 transcriptional repressor
involved_in
ISO
(PMID:15947108)
RGD
PMID:15947108
NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
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Nfkb1
nuclear factor kappa B subunit 1
involved_in
ISO
(PMID:15243130)
RGD
PMID:15243130
NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
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Akr1c3
aldo-keto reductase family 1, member C3
involved_in
ISO
(PMID:21851338)
RGD
PMID:21851338
NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873
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Prmt3
protein arginine methyltransferase 3
involved_in
ISO ISS
(PMID:33495566) GO_REF:0000024
RGD UniProt
PMID:33495566
GO_REF:0000024
NCBI chr 1:99,492,712...99,581,774
Ensembl chr 1:99,492,724...99,579,435
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Snai1
snail family transcriptional repressor 1
involved_in
ISO
(PMID:19502595)
RGD
PMID:19502595
NCBI chr 3:156,248,479...156,252,969
Ensembl chr 3:156,248,485...156,252,969
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Snai2
snail family transcriptional repressor 2
involved_in
ISO
(PMID:18485278), (PMID:19502595)
RGD
PMID:18485278 PMID:19502595
NCBI chr11:86,183,800...86,186,109
Ensembl chr11:86,181,909...86,186,200
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Nnmt
nicotinamide N-methyltransferase
involved_in
ISO
(PMID:21823666) (PMID:21823666), (PMID:8182091) (MGI:5708799|PMID:26168293)
RGD
PMID:8182091 PMID:21823666 PMID:26168293
MGI:5708799
NCBI chr 8:48,928,663...48,947,734
Ensembl chr 8:48,933,598...48,946,655
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Vnn1
vanin 1
involved_in
ISO IBA
(PMID:11491533), (PMID:25478849) PMID:21873635
RGD
PMID:11491533 PMID:25478849 PMID:21873635
RGD:13792537
NCBI chr 1:21,537,084...21,547,395
Ensembl chr 1:21,537,094...21,547,395
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Vnn3
vanin 3
involved_in
IBA ISO
PMID:21873635 (MGI:2149227|PMID:11491533)
RGD
PMID:11491533 PMID:21873635
MGI:2149227 , RGD:13792537
NCBI chr 1:21,571,364...21,583,626
Ensembl chr 1:21,571,364...21,583,626
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Cbr1l1
carbonyl reductase 1 like 1
IDA
menadione catabolism
RGD
PMID:16359670
RGD:2316273
NCBI chr11:32,860,618...32,862,981
Ensembl chr11:32,857,991...32,895,275 Ensembl chr11:32,857,991...32,895,275
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Cbr3
carbonyl reductase 3
IDA
menadione catabolism
RGD
PMID:18983987
RGD:2316293
NCBI chr11:33,008,615...33,016,877
Ensembl chr11:33,008,615...33,016,875
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Cyp4f1
cytochrome P450, family 4, subfamily f, polypeptide 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046
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Cyp4f18
cytochrome P450, family 4, subfamily f, polypeptide 18
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940
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Cyp4f4
cytochrome P450, family 4, subfamily f, polypeptide 4
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:11,717,208...11,733,507
Ensembl chr 7:11,717,208...11,733,506
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Cyp4f40
cytochrome P450, family 4, subfamily f, polypeptide 40
involved_in
IBA ISO
PMID:21873635 (PMID:24138531)
RGD
PMID:24138531 PMID:21873635
RGD:13792537
NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229
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Clybl
citramalyl-CoA lyase
involved_in
ISO
(MGI:5926841|PMID:29056341)
RGD
PMID:29056341
MGI:5926841
NCBI chr15:99,283,644...99,505,697
Ensembl chr15:99,283,650...99,505,695
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Rdh10
retinol dehydrogenase 10
IMP
RGD
PMID:21138835
RGD:6771354
NCBI chr 5:3,186,671...3,215,572
Ensembl chr 5:3,188,445...3,215,572
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Rdh16
retinol dehydrogenase 16
IMP
RGD
PMID:21138835
RGD:6771354
NCBI chr 7:63,616,724...63,624,120
Ensembl chr 7:63,597,536...63,624,124
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Ifng
interferon gamma
involved_in
ISO
(PMID:9282826)
RGD
PMID:9282826
NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
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Tnf
tumor necrosis factor
involved_in
ISO
(PMID:1690216)
RGD
PMID:1690216
NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
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Pdxk
pyridoxal kinase
involved_in
IBA IEA
PMID:21873635 GO_REF:0000002
InterPro
PMID:21873635
GO_REF:0000002, RGD:13792537
NCBI chr20:10,210,393...10,231,937
Ensembl chr20:10,210,289...10,232,110
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RGD1566085
similar to pyridoxal (pyridoxine, vitamin B6) kinase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr20:10,162,934...10,192,610
Ensembl chr20:10,164,099...10,192,739
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Pdxk
pyridoxal kinase
IDA
RGD
PMID:2988502
RGD:2303018
NCBI chr20:10,210,393...10,231,937
Ensembl chr20:10,210,289...10,232,110
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Pnpo
pyridoxamine 5'-phosphate oxidase
involved_in
ISO IBA
(PMID:12824491) PMID:21873635
RGD
PMID:12824491 PMID:21873635
RGD:13792537
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Pdxp
pyridoxal phosphatase
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:5545856|PMID:24338687), (MGI:5545857|PMID:24338473), (MGI:6695679|PMID:25783190) (PMID:14522954), (PMID:8132548) GO_REF:0000024
Ensembl RGD UniProt
PMID:8132548 PMID:14522954 PMID:24338473 PMID:24338687 PMID:25783190
GO_REF:0000024 GO_REF:0000107 MGI:5545856 MGI:5545857 MGI:6695679
NCBI chr 7:110,472,515...110,477,963
Ensembl chr 7:110,472,515...110,477,963
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Alpl
alkaline phosphatase, biomineralization associated
involved_in
ISO
(MGI:76012|PMID:7550313)
RGD
PMID:7550313
MGI:76012
NCBI chr 5:149,951,397...150,006,424
Ensembl chr 5:149,951,409...150,006,446
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Pnpo
pyridoxamine 5'-phosphate oxidase
involved_in
IEA
GO_REF:0000043
UniProt
GO_REF:0000043
NCBI chr10:81,924,584...81,930,844
Ensembl chr10:81,924,569...81,930,871
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Clybl
citramalyl-CoA lyase
involved_in
ISS ISO IBA
GO_REF:0000024 (MGI:5926841|PMID:29056341) PMID:21873635 (PMID:29056341)
UniProt RGD
PMID:29056341 PMID:21873635
GO_REF:0000024 MGI:5926841 , RGD:13792537
NCBI chr15:99,283,644...99,505,697
Ensembl chr15:99,283,650...99,505,695
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Dgat1
diacylglycerol O-acyltransferase 1
IMP
RGD
PMID:18000880
RGD:10400849
NCBI chr 7:108,223,860...108,235,413
Ensembl chr 7:108,218,524...108,234,299
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Isx
intestine-specific homeobox
acts_upstream_of_or_within
ISO
MGI:3775943 (MGI:3775349|PMID:18093975)
RGD
PMID:18093975
MGI:3775349
NCBI chr19:13,218,552...13,239,754
Ensembl chr19:13,218,552...13,239,760
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Cd320
CD320 molecule
acts_upstream_of_or_within
ISO
MGI:3858540 (MGI:5506682|PMID:23430977)
RGD
PMID:23430977
MGI:5506682
NCBI chr 7:14,626,171...14,631,976
Ensembl chr 7:14,609,146...14,631,976
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Cyp26a1
cytochrome P450, family 26, subfamily a, polypeptide 1
involved_in
ISO
(PMID:10823918) (MGI:894533|PMID:9250660)
RGD
PMID:9250660 PMID:10823918
MGI:894533
NCBI chr 1:235,471,368...235,475,204
Ensembl chr 1:235,471,298...235,475,204
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Cyp26b1
cytochrome P450, family 26, subfamily b, polypeptide 1
involved_in
IMP ISO
(PMID:10823918)
RGD
PMID:10823918 PMID:21138835
RGD:6771354
NCBI chr 4:117,041,808...117,058,628
Ensembl chr 4:117,041,808...117,058,628
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Cyp26c1
cytochrome P450, family 26, subfamily C, polypeptide 1
involved_in
ISO
(PMID:14532297)
RGD
PMID:14532297
NCBI chr 1:235,458,961...235,468,433
Ensembl chr 1:235,459,356...235,466,842
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Cyp2w1
cytochrome P450, family 2, subfamily w, polypeptide 1
involved_in
ISO
(PMID:26936974)
RGD
PMID:26936974
NCBI chr12:15,291,552...15,296,421
Ensembl chr12:15,291,704...15,296,421
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AABR07053065.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr 3:86,511,659...86,512,126
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Rfk
riboflavin kinase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
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Rfk
riboflavin kinase
involved_in
ISO IBA
(PMID:19641494) PMID:21873635
RGD
PMID:19641494 PMID:21873635
RGD:13792537
NCBI chr 1:214,799,880...214,807,440
Ensembl chr 1:214,799,825...214,807,438
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Tpk1
thiamin pyrophosphokinase 1
involved_in
ISO IBA IEA
(PMID:11342111) PMID:21873635 GO_REF:0000041
RGD UniProt
PMID:11342111 PMID:21873635
GO_REF:0000041, RGD:13792537
NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
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Thtpa
thiamine triphosphatase
involved_in
ISS ISO IBA
GO_REF:0000024 (MGI:3796446|PMID:18276586) PMID:21873635
UniProt RGD
PMID:18276586 PMID:21873635
GO_REF:0000024 MGI:3796446 , RGD:13792537
NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
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Acp3
acid phosphatase 3
involved_in
IEA ISO
GO_REF:0000107 (MGI:3849266|PMID:18940592)
Ensembl RGD
PMID:18940592
GO_REF:0000107 MGI:3849266
NCBI chr 8:104,905,570...104,956,146
Ensembl chr 8:104,905,586...104,954,236
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Thtpa
thiamine triphosphatase
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580
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Tpk1
thiamin pyrophosphokinase 1
acts_upstream_of_or_within
ISO
(MGI:1350425|PMID:10567383)
RGD
PMID:10567383
MGI:1350425
NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694
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Lipa
lipase A, lysosomal acid type
acts_upstream_of_or_within
ISO
MGI:2451080 (MGI:5805310|PMID:27354281)
RGD
PMID:27354281
MGI:5805310
NCBI chr 1:232,024,351...232,167,329
Ensembl chr 1:232,024,356...232,057,633
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Lrat
lecithin retinol acyltransferase
involved_in acts_upstream_of_or_within
IDA IBA ISO
PMID:21873635 (MGI:6414681|PMID:28758396) (MGI:1928450|PMID:11108736)
RGD
PMID:11108736 PMID:28758396 PMID:2253789 PMID:21873635 PMID:9244401 PMID:8460936 More...
MGI:1928450 MGI:6414681 , RGD:1599829 , RGD:13792537 , RGD:1599832 , RGD:1599831
NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619
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Ppard
peroxisome proliferator-activated receptor delta
IMP
RGD
PMID:12576510
RGD:1625187
NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
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Rbp1
retinol binding protein 1
involved_in
ISO ISS
(PMID:15632377) GO_REF:0000024
RGD UniProt
PMID:15632377
GO_REF:0000024
NCBI chr 8:99,025,218...99,046,740
Ensembl chr 8:99,025,206...99,046,743
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Cyp24a1
cytochrome P450, family 24, subfamily a, polypeptide 1
involved_in
TAS IBA IDA ISO
PMID:21873635 PMID:16617161 (PMID:16617161), (PMID:24893882), (PMID:29461981), (PMID:8506296), (PMID:8679605) PMID:10231362
RGD
PMID:8506296 PMID:8679605 PMID:16617161 PMID:24893882 PMID:29461981 PMID:12048211 PMID:21873635 PMID:16617161 PMID:10231362 More...
RGD:625496 , RGD:13792537 , RGD:14995311 , RGD:14995316
NCBI chr 3:159,275,947...159,290,383
Ensembl chr 3:159,275,947...159,290,383
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Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
IBA IDA IEA ISO
PMID:21873635 PMID:9333115 GO_REF:0000107 (MGI:1097206|PMID:9295274)
Ensembl RGD
PMID:9295274 PMID:21873635 PMID:9333115
GO_REF:0000107 MGI:1097206 , RGD:13792537 , RGD:69373
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Cyp3a2
cytochrome P450, family 3, subfamily a, polypeptide 2
involved_in
ISO
(PMID:29461981)
RGD
PMID:29461981
NCBI chr12:9,207,986...9,230,038
Ensembl chr12:9,015,383...9,285,008
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Fgf23
fibroblast growth factor 23
involved_in
ISO
(PMID:15040831)
RGD
PMID:15040831
NCBI chr 4:159,914,393...159,922,073
Ensembl chr 4:159,914,272...159,923,821
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Calb1
calbindin 1
TAS
RGD
PMID:2792772
RGD:68751
NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431
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Cyp24a1
cytochrome P450, family 24, subfamily a, polypeptide 1
acts_upstream_of_or_within
IDA ISO TAS
MGI:2182338 (MGI:3046628|PMID:15225763)
RGD
PMID:15225763 PMID:1991512 PMID:12372434
MGI:3046628 , RGD:1298844 , RGD:734870
NCBI chr 3:159,275,947...159,290,383
Ensembl chr 3:159,275,947...159,290,383
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Cyp27b1
cytochrome P450, family 27, subfamily b, polypeptide 1
involved_in
TAS ISO IDA
(PMID:9415400)
RGD
PMID:9415400 PMID:11316734 PMID:9371776
RGD:68680 , RGD:69372
NCBI chr 7:62,869,340...62,876,242
Ensembl chr 7:62,871,297...62,876,241
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Cyp2r1
cytochrome P450, family 2, subfamily r, polypeptide 1
acts_upstream_of_or_within
ISO
(MGI:2677973|PMID:12867411)
RGD
PMID:12867411
MGI:2677973
NCBI chr 1:168,749,302...168,798,079
Ensembl chr 1:168,751,038...168,797,759
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Fgf23
fibroblast growth factor 23
IEP
RGD
PMID:15531762
RGD:1598934
NCBI chr 4:159,914,393...159,922,073
Ensembl chr 4:159,914,272...159,923,821
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Gc
GC, vitamin D binding protein
acts_upstream_of_or_within
ISO
(MGI:3046628|PMID:15225763)
RGD
PMID:15225763
MGI:3046628
NCBI chr14:18,632,146...18,667,563
Ensembl chr14:18,632,135...18,667,567
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Lrp2
LDL receptor related protein 2
acts_upstream_of_or_within
ISO
(MGI:1331347|PMID:10052453)
RGD
PMID:10052453
MGI:1331347
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Enpp1
ectonucleotide pyrophosphatase/phosphodiesterase 1
involved_in
ISO
MGI:1857079 (MGI:6282476|PMID:28798354)
RGD
PMID:28798354
MGI:6282476
NCBI chr 1:20,698,746...20,763,741
Ensembl chr 1:20,698,764...20,763,715
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Fgfr1
Fibroblast growth factor receptor 1
acts_upstream_of_or_within
ISO
MGI:95525 (MGI:5548021|PMID:24259513)
RGD
PMID:24259513
MGI:5548021
NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
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Fgfr4
fibroblast growth factor receptor 4
acts_upstream_of_or_within
ISO
MGI:95522 (MGI:5548021|PMID:24259513)
RGD
PMID:24259513
MGI:5548021
NCBI chr17:9,461,541...9,476,268
Ensembl chr17:9,461,547...9,476,242
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Ugt1a2
UDP glucuronosyltransferase 1 family, polypeptide A2
involved_in
ISO
(PMID:23756265)
RGD
PMID:23756265
NCBI chr 9:88,791,216...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a3
UDP glycosyltransferase 1 family, polypeptide A3
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr 9:88,780,328...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Ugt1a5
UDP glucuronosyltransferase family 1 member A5
involved_in
ISO
(PMID:18177842), (PMID:24641623)
RGD
PMID:18177842 PMID:24641623
NCBI chr 9:88,762,250...88,808,465
Ensembl chr 9:88,713,184...88,808,465
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Pltp
phospholipid transfer protein
acts_upstream_of_or_within
ISO
MGI:2176342 (MGI:3622506|PMID:16467369)
RGD
PMID:16467369
MGI:3622506
NCBI chr 3:153,574,825...153,592,647
Ensembl chr 3:153,574,825...153,592,647
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Npc1l1
NPC1 like intracellular cholesterol transporter 1
involved_in
ISO
(PMID:28315682)
RGD
PMID:28315682
NCBI chr14:81,071,448...81,091,113
Ensembl chr14:81,071,451...81,091,113
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Nqo1
NAD(P)H quinone dehydrogenase 1
involved_in
ISS ISO
GO_REF:0000024 (PMID:9271353)
UniProt RGD
PMID:9271353
GO_REF:0000024
NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
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Ttpa
alpha tocopherol transfer protein
involved_in acts_upstream_of_or_within
IDA ISO IBA
(MGI:4461120|PMID:19923370) MGI:1932559|MGI:2386172 (MGI:1928440|PMID:11095717), (MGI:1929784|PMID:11076932), (MGI:3691723|PMID:16014812) PMID:21873635
RGD
PMID:11076932 PMID:11095717 PMID:16014812 PMID:19923370 PMID:9356467 PMID:21873635 More...
MGI:1928440 MGI:1929784 MGI:3691723 MGI:4461120 , RGD:1600435 , RGD:13792537
NCBI chr 5:33,497,537...33,518,936
Ensembl chr 5:33,497,137...33,518,073
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Ubiad1
UbiA prenyltransferase domain containing 1
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (PMID:20953171), (PMID:23169578)
UniProt RGD
PMID:20953171 PMID:23169578 PMID:21873635
GO_REF:0000024, RGD:13792537
NCBI chr 5:158,856,582...158,880,490
Ensembl chr 5:158,868,672...158,880,271
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Cyp4f40
cytochrome P450, family 4, subfamily f, polypeptide 40
involved_in
ISO
(PMID:24138531)
RGD
PMID:24138531
NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229
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AABR07039936.1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr X:82,134,804...82,146,443
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Aifm2
apoptosis inducing factor, mitochondria associated 2
involved_in
ISO
(PMID:35922516)
RGD
PMID:35922516
NCBI chr20:29,654,283...29,679,239
Ensembl chr20:29,652,927...29,679,236
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Cbr1
carbonyl reductase 1
involved_in
ISO
(PMID:18449627)
RGD
PMID:18449627
NCBI chr11:32,876,563...32,884,234
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Cbr1l1
carbonyl reductase 1 like 1
involved_in
ISO ISS
(PMID:18449627) GO_REF:0000024
RGD UniProt
PMID:18449627
GO_REF:0000024
NCBI chr11:32,860,618...32,862,981
Ensembl chr11:32,857,991...32,895,275 Ensembl chr11:32,857,991...32,895,275
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Cbr1l2
carbonyl reductase 1 like 2
involved_in
ISO
(PMID:18449627)
RGD
PMID:18449627
NCBI chr11:32,892,640...32,895,277
Ensembl chr11:32,857,991...32,895,275
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Crcp
CGRP receptor component
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr12:26,623,968...26,659,756
Ensembl chr12:26,623,976...26,768,225
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ENSRNOG00000070855
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
Ensembl chr17:34,016,445...34,017,156
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Nqo1
NAD(P)H quinone dehydrogenase 1
involved_in
IDA ISO
PMID:8999809 (MGI:85821|PMID:8999809) (PMID:8999809)
RGD
PMID:8999809 PMID:8999809
MGI:85821 , RGD:151356617
NCBI chr19:35,295,633...35,310,528
Ensembl chr19:35,295,573...35,310,557
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Vkorc1
vitamin K epoxide reductase complex, subunit 1
involved_in acts_upstream_of_or_within
ISS ISO IEA IBA
GO_REF:0000024 (PMID:16270630), (PMID:33154105) GO_REF:0000002 (MGI:3604816|PMID:15879509) (MGI:5559848|PMID:19492146) PMID:21873635
UniProt RGD InterPro
PMID:15879509 PMID:16270630 PMID:19492146 PMID:33154105 PMID:21873635
GO_REF:0000002 GO_REF:0000024 MGI:3604816 MGI:5559848 , RGD:13792537
NCBI chr 1:182,502,491...182,505,012
Ensembl chr 1:182,500,844...182,505,008
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Vkorc1l1
vitamin K epoxide reductase complex, subunit 1-like 1
involved_in
ISO IEA IDA IBA
(PMID:21367861) GO_REF:0000002 (MGI:5559651|PMID:23928358) PMID:21873635
RGD InterPro
PMID:21367861 PMID:23928358 PMID:23928358 PMID:21873635
GO_REF:0000002 MGI:5559651 , RGD:8553362 , RGD:13792537
NCBI chr12:26,717,959...26,768,193
Ensembl chr12:26,623,976...26,768,225
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