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ONTOLOGY REPORT - ANNOTATIONS

Term:thiamine diphosphate biosynthetic process
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Accession:GO:0009229 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.
Synonyms:exact_synonym: TPP biosynthesis;   TPP biosynthetic process;   thiamin diphosphate biosynthetic process;   thiamin pyrophosphate biosynthesis;   thiamin pyrophosphate biosynthetic process;   thiamine diphosphate anabolism;   thiamine diphosphate biosynthesis;   thiamine diphosphate formation;   thiamine diphosphate synthesis;   thiamine pyrophosphate biosynthesis;   thiamine pyrophosphate biosynthetic process


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thiamine diphosphate biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc19a2 solute carrier family 19 member 2 involved_in ISO (PMID:8186267) RGD PMID:8186267 NCBI chr13:76,601,975...76,616,175
Ensembl chr13:76,601,900...76,616,172 		JBrowse link
G Slc19a3 solute carrier family 19 member 3 involved_in ISO MGI:4948864 (PMID:28665968), (PMID:8186267) RGD PMID:8186267 PMID:28665968 NCBI chr 9:84,275,722...84,299,368
Ensembl chr 9:84,277,024...84,299,337 		JBrowse link
G Slc25a19 solute carrier family 25 member 19 involved_in ISO MGI:3691853 (PMID:17035501), (PMID:8186267) RGD PMID:8186267 PMID:17035501 NCBI chr10:100,853,554...100,867,517
Ensembl chr10:100,847,168...100,867,447 		JBrowse link
G Thtpa thiamine triphosphatase involved_in IEA
ISO		 GO_REF:0000107
(PMID:18276586)		 Ensembl
RGD		 PMID:18276586 GO_REF:0000107 NCBI chr15:28,567,619...28,571,580
Ensembl chr15:28,567,323...28,571,580 		JBrowse link
G Tpk1 thiamin pyrophosphokinase 1 involved_in IEA
IBA
ISO		 GO_REF:0000041
GO_REF:0000033
(PMID:10567383)
(PMID:11342111), (PMID:38547260)		 UniProt
GO_Central
RGD		 PMID:10567383 PMID:11342111 PMID:38547260 GO_REF:0000033 GO_REF:0000041 NCBI chr 4:72,170,134...72,557,707
Ensembl chr 4:72,170,134...72,557,694 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organophosphate metabolic process 1069
          organophosphate biosynthetic process 545
            thiamine diphosphate biosynthetic process 5
              negative regulation of thiamine diphosphate biosynthetic process 0
              regulation of thiamine diphosphate biosynthetic process + 0
Path 2
Term Annotations click to browse term
  biological_process 20413
    metabolic process 11835
      organic substance metabolic process 11328
        organonitrogen compound metabolic process 5843
          organonitrogen compound biosynthetic process 2154
            pyrimidine-containing compound biosynthetic process 41
              thiamine-containing compound biosynthetic process 5
                thiamine diphosphate biosynthetic process 5
                  negative regulation of thiamine diphosphate biosynthetic process 0
                  regulation of thiamine diphosphate biosynthetic process + 0
paths to the root