Slc52a3 (solute carrier family 52 member 3)

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Gene: Slc52a3 (solute carrier family 52 member 3) Rattus norvegicus

Analyze

Symbol:

Slc52a3

Name:

solute carrier family 52 member 3

RGD ID:

1304644

Description:

Enables riboflavin transmembrane transporter activity. Involved in riboflavin transport. Located in plasma membrane. Human ortholog(s) of this gene implicated in Brown-Vialetto-Van Laere syndrome 1 and Fazio-Londe disease. Orthologous to human SLC52A3 (solute carrier family 52 member 3); INTERACTS WITH 17beta-estradiol; acetamide; acrylamide.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

hypothetical protein LOC311536; LOC311536; MGC116234; Rft2; RGD1304644; riboflavin transporter 2; rRFT2; similar to RIKEN cDNA 2310046K01; solute carrier family 52, riboflavin transporter, member 3

RGD Orthologs

Human

Mouse

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	SLC52A3 (solute carrier family 52 member 3)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Slc52a3 (solute carrier protein family 52, member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Slc52a3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	SLC52A3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	SLC52A3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Slc52a3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	SLC52A3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	SLC52A3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Slc52a3 (solute carrier family 52 member 3)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ARL14EPL (ADP ribosylation factor like GTPase 14 effector protein like)	HGNC	OMA
Alliance orthologs ³
Homo sapiens (human):	SLC52A3 (solute carrier family 52 member 3)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Slc52a3 (solute carrier protein family 52, member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	slc52a3 (solute carrier family 52 member 3)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	zgc:91890	Alliance	DIOPT (OMA\|OrthoFinder\|OrthoInspector)
Caenorhabditis elegans (roundworm):	rft-1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Drosophila melanogaster (fruit fly):	Rift	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Caenorhabditis elegans (roundworm):	rft-2	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|SonicParanoid)
Xenopus tropicalis (tropical clawed frog):	slc52a3	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

mRatBN7.2 - mRatBN7.2 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	140,498,924 - 140,515,845 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	140,509,473 - 140,514,096 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	144,413,961 - 144,418,585 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	152,997,774 - 153,002,398 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	150,739,621 - 150,744,225 (+)	NCBI	Rnor_WKY
Rnor_6.0	3	147,503,266 - 147,517,935 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,511,406 - 147,516,455 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	153,853,145 - 153,866,321 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	142,360,661 - 142,365,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	142,266,232 - 142,288,334 (+)	NCBI
Celera	3	139,263,935 - 139,268,559 (+)	NCBI		Celera
Cytogenetic Map	3	q41	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Brown-Vialetto-Van Laere syndrome (ISO)

Brown-Vialetto-Van Laere syndrome 1 (ISO)

esophagus squamous cell carcinoma (ISO)

Fazio-Londe disease (ISO)

genetic disease (ISO)

motor neuron disease (ISO)

Polyglucosan Body Myopathy 1 with or without Immunodeficiency (ISO)

pre-malignant neoplasm (ISO)

progressive bulbar palsy (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

1,1-dichloroethene (ISO)

1,2-dimethylhydrazine (ISO)

17beta-estradiol (EXP)

2-hydroxypropanoic acid (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

acetamide (EXP)

acrylamide (EXP)

amiloride (EXP)

antirheumatic drug (ISO)

atrazine (ISO)

benzo[a]pyrene (ISO)

bisphenol A (EXP,ISO)

carbon nanotube (ISO)

dorsomorphin (ISO)

entinostat (ISO)

FAD (EXP)

fenvalerate (EXP)

FMN (EXP)

furan (EXP)

gentamycin (EXP)

hexane (EXP)

lumiflavin (EXP)

panobinostat (ISO)

paracetamol (EXP)

propanal (ISO)

rac-lactic acid (ISO)

resveratrol (ISO)

riboflavin (EXP)

SB 431542 (ISO)

silicon dioxide (ISO)

silver atom (ISO)

silver(0) (ISO)

sodium arsenite (ISO)

testosterone (ISO)

titanium dioxide (ISO)

trichloroethene (EXP)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to heat (IEA,ISO)

flavin adenine dinucleotide biosynthetic process (ISO)

riboflavin metabolic process (ISO)

riboflavin transport (IBA,IDA,IEA,ISO)

sensory perception of sound (IEA,ISO,ISS)

Cellular Component

cytoplasm (ISO)

nucleus (ISO)

plasma membrane (IDA,IEA,ISO)

Molecular Function

protein binding (ISO)

riboflavin transmembrane transporter activity (IBA,IDA,IEA,ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from MGI mouse gene data--August 2006	MGD data from the GO Consortium
3.	OMIM Disease Annotation Pipeline	OMIM Disease Annotation Pipeline
4.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
6.	Identification and functional characterization of rat riboflavin transporter 2.	Yamamoto S, etal., J Biochem. 2009 Apr;145(4):437-43. doi: 10.1093/jb/mvn181. Epub 2009 Jan 3.

Additional References at PubMed

PMID:12477932	PMID:18755693	PMID:20206331	PMID:20463145	PMID:20724488	PMID:22273710	PMID:23413253	PMID:27964953	PMID:29428966

Genomics

Comparative Map Data

Slc52a3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	3	140,498,924 - 140,515,845 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	140,509,473 - 140,514,096 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	144,413,961 - 144,418,585 (+)	NCBI	Rnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0	3	152,997,774 - 153,002,398 (+)	NCBI	Rnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0	3	150,739,621 - 150,744,225 (+)	NCBI	Rnor_WKY
Rnor_6.0	3	147,503,266 - 147,517,935 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	147,511,406 - 147,516,455 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	153,853,145 - 153,866,321 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	142,360,661 - 142,365,285 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	3	142,266,232 - 142,288,334 (+)	NCBI
Celera	3	139,263,935 - 139,268,559 (+)	NCBI		Celera
Cytogenetic Map	3	q41	NCBI

SLC52A3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	20	760,080 - 780,033 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	20	760,080 - 776,015 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	20	740,724 - 756,628 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	20	688,724 - 697,228 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	20	688,724 - 697,131	NCBI
Celera	20	835,489 - 844,006 (-)	NCBI		Celera
Cytogenetic Map	20	p13	NCBI
HuRef	20	692,137 - 700,684 (-)	NCBI		HuRef
CHM1_1	20	740,737 - 749,241 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	20	804,408 - 824,432 (-)	NCBI		T2T-CHM13v2.0

Slc52a3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	151,838,431 - 151,851,178 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	151,838,431 - 151,851,178 (+)	Ensembl		GRCm39 Ensembl
GRCm38	2	151,996,511 - 152,009,258 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	151,996,511 - 152,009,258 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	151,822,247 - 151,834,994 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	151,688,069 - 151,700,697 (+)	NCBI		MGSCv36	mm8
Celera	2	157,812,297 - 157,825,037 (+)	NCBI		Celera
Cytogenetic Map	2	G3	NCBI

Slc52a3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955596	47,108 - 60,239 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955596	48,463 - 60,239 (-)	NCBI	ChiLan1.0	ChiLan1.0

SLC52A3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1	20	1,846,948 - 1,863,047 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	20	970,380 - 986,368 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	20	739,556 - 755,486 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	20	739,556 - 755,486 (-)	Ensembl	panpan1.1		panPan2

SLC52A3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	24	20,127,527 - 20,141,070 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	24	20,127,520 - 20,156,003 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	24	19,780,739 - 19,794,279 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	24	20,818,447 - 20,831,867 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	24	20,818,436 - 20,830,516 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	24	20,094,778 - 20,108,312 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	24	20,200,464 - 20,214,008 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	24	20,631,248 - 20,644,641 (+)	NCBI		UU_Cfam_GSD_1.0

Slc52a3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024408640	169,340,088 - 169,345,973 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936485	17,771,797 - 17,777,637 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC52A3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	17	34,459,359 - 34,481,026 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	17	34,459,291 - 34,481,022 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	17	39,144,206 - 39,161,184 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC52A3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	2	55,744,934 - 55,760,957 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	2	55,752,837 - 55,761,120 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666078	8,196,338 - 8,204,817 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc52a3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624741	2,097,723 - 2,107,127 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624741	2,093,190 - 2,106,918 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in Slc52a3
21 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	377
Count of miRNA genes:	209
Interacting mature miRNAs:	244
Transcripts:	ENSRNOT00000006828
Prediction methods:	Microtar, Miranda, Rnahybrid
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (mRatBN7.2)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
70216	Cm14	Cardiac mass QTL 14	2.1		heart mass (VT:0007028)	heart wet weight (CMO:0000069)	3	31172320	163586636	Rat
2301970	Bw81	Body weight QTL 81	5.19		body mass (VT:0001259)	body weight (CMO:0000012)	3	41874578	155617519	Rat
2301971	Cm71	Cardiac mass QTL 71	4.63		heart left ventricle mass (VT:0007031)	heart left ventricle weight (CMO:0000776)	3	41874578	155617519	Rat
1559282	Emca5	Estrogen-induced mammary cancer QTL 5	3.9		mammary gland integrity trait (VT:0010552)	percentage of study population developing mammary tumors during a period of time (CMO:0000948)	3	43827364	169034231	Rat
2292591	Esta4	Estrogen-induced thymic atrophy QTL 4			thymus mass (VT:0004954)	thymus wet weight (CMO:0000855)	3	47233211	147415807	Rat
1581568	Rf53	Renal function QTL 53			urine total protein amount (VT:0000032)	urine protein excretion rate to body weight ratio (CMO:0001099)	3	56395968	161299569	Rat
8662816	Vetf4	Vascular elastic tissue fragility QTL 4	4		renal artery integrity trait (VT:0010642)	number of ruptures of the internal elastic lamina of the renal arteries (CMO:0002563)	3	59242096	157323038	Rat
1581546	Pur13	Proteinuria QTL 13	2.93	0.0335	urine total protein amount (VT:0000032)	urine protein excretion rate (CMO:0000759)	3	78196190	146592722	Rat
631841	Niddm39	Non-insulin dependent diabetes mellitus QTL 39	3.36		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	94856903	159898684	Rat
724532	Cm17	Cardiac mass QTL 17	2		heart mass (VT:0007028)	calculated heart weight (CMO:0000073)	3	95735366	140735366	Rat
1354611	Despr2	Despair related QTL 2	3.03	0.0028	locomotor behavior trait (VT:0001392)	amount of time spent in voluntary immobility (CMO:0001043)	3	97084464	142084464	Rat
2293087	Iddm27	Insulin dependent diabetes mellitus QTL 27	2.68		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	3	97551417	147415807	Rat
2312659	Slep7	Serum leptin concentration QTL 7		0.001	blood leptin amount (VT:0005667)	serum leptin level (CMO:0000780)	3	98535255	168026850	Rat
2312670	Bw94	Body weight QTL 94		0.01	inguinal fat pad mass (VT:0010424)	inguinal fat pad weight to body weight ratio (CMO:0001253)	3	98535255	168026850	Rat
2312673	Scl63	Serum cholesterol level QTL 63		0.001	blood cholesterol amount (VT:0000180)	serum total cholesterol level (CMO:0000363)	3	98535255	168026850	Rat
2302373	Gluco39	Glucose level QTL 39	5.01		blood glucose amount (VT:0000188)	blood glucose level area under curve (AUC) (CMO:0000350)	3	98535386	161695835	Rat
619618	Rf3	Renal disease susceptibility QTL 3	6.5	0.001	urine albumin amount (VT:0002871)	urine albumin excretion rate to body weight ratio (CMO:0001270)	3	107693393	152693393	Rat
1578754	Stresp16	Stress response QTL 16	4	0.001	blood renin amount (VT:0003349)	plasma renin activity level (CMO:0000116)	3	112681431	157681431	Rat
1576306	Schws3	Schwannoma susceptibility QTL 3		0.001	nervous system integrity trait (VT:0010566)	percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)	3	118839124	163839124	Rat
1598877	Bp285	Blood pressure QTL 285	1.5	0.03	arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	120538241	165538241	Rat
1300173	Rf11	Renal function QTL 11	3.38		renal blood flow trait (VT:2000006)	absolute change in renal blood flow rate (CMO:0001168)	3	121056165	145956249	Rat
1300159	Kidm4	Kidney mass QTL 4	3.83		kidney mass (VT:0002707)	right kidney wet weight to body weight ratio (CMO:0001953)	3	121056165	157309487	Rat
10755461	Coatc16	Coat color QTL 16			coat/hair pigmentation trait (VT:0010463)	pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)	3	122438700	167438700	Rat
631541	Bp81	Blood pressure QTL 81	4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	3	124122556	169034231	Rat
2303620	Vencon4	Ventilatory control QTL 4	3.9		respiration trait (VT:0001943)	tidal volume (CMO:0000222)	3	127162703	168026850	Rat
631673	Iddm13	Insulin dependent diabetes mellitus QTL 13	1.3	0.663	blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	3	130193298	161695983	Rat
1578656	Vnigr2	Vascular neointimal growth QTL 2	4.2		artery morphology trait (VT:0002191)	lesioned artery residual lumen area (CMO:0001417)	3	130656562	169034231	Rat
1578653	Vnigr3	Vascular neointimal growth QTL 3	3.1		artery morphology trait (VT:0002191)	artery neointimal hyperplastic lesion area (CMO:0001414)	3	130656562	169034231	Rat
9589106	Insul23	Insulin level QTL 23	13.86	0.001	blood insulin amount (VT:0001560)	plasma insulin level (CMO:0000342)	3	131635904	169034231	Rat
2298477	Eau4	Experimental allergic uveoretinitis QTL 4		0.0011	uvea integrity trait (VT:0010551)	experimental autoimmune uveitis score (CMO:0001504)	3	137398739	169034231	Rat
8552952	Pigfal13	Plasma insulin-like growth factor 1 level QTL 13			blood insulin-like growth factor amount (VT:0010479)	plasma insulin-like growth factor 1 level (CMO:0001299)	3	138799500	169034231	Rat
5686842	Rf59	Renal function QTL 59			urine albumin amount (VT:0002871)	urine albumin excretion rate (CMO:0000757)	3	140069424	146976080	Rat

Expression

RNA-SEQ Expression

High: > 1000 TPM value Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM Below Cutoff: < 0.5 TPM

	alimentary part of gastrointestinal system	circulatory system	endocrine system	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	appendage
High
Medium										17	13	2
Low	3	11	29	18	17	18		1	60	18	21	9
Below cutoff		28	28	23	2	23	8	10	14		7		8

View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001037198	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006235238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008762328	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017591776	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105056	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039105057	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005501890	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	BC099097	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JACYVU010000119	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSRNOT00000006828 ⟹ ENSRNOP00000006828

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	140,509,473 - 140,514,096 (+)	Ensembl
Rnor_6.0 Ensembl	3	147,511,563 - 147,516,186 (+)	Ensembl

RefSeq Acc Id:

ENSRNOT00000082438 ⟹ ENSRNOP00000074344

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	3	140,509,491 - 140,514,096 (+)	Ensembl
Rnor_6.0 Ensembl	3	147,511,406 - 147,516,455 (+)	Ensembl

RefSeq Acc Id:

NM_001037198 ⟹ NP_001032275

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,509,473 - 140,514,097 (+)	NCBI
Rnor_6.0	3	147,511,563 - 147,516,187 (+)	NCBI
Rnor_5.0	3	153,853,145 - 153,866,321 (+)	NCBI
RGSC_v3.4	3	142,360,661 - 142,365,285 (+)	RGD
Celera	3	139,263,935 - 139,268,559 (+)	RGD

Sequence:

show sequence

TGGCCCAGGCTGCCCACAATGGCCTTCCTGACACACCTGCTGGTCTGCGTCTTTGGCATGGGCT
CCTGGGTGGCCATCAATGGGCTCTGGGTGGAGCTGCCCCTGCTGGTGACCAAGTTGCCCGAGGG
CTGGTACTTGCCCTCTTACCTAACTGTGGTCATCCAACTGGCCAACACAGGCCCCCTCCTAGTC
ACCCTGATGCATCGCTTCCGACCCGGCTGCCTGTCTGAGGTGCCCGTGATCTTCCTTATCCTGT
GTGTAGGCACAACTGCCTGCATCCTCCTAGCCTTCCTGTGGAGTATGACCTCCTGGATACAGGG
TAGACAGCATAGTGTGGCCTTCATCGTCCTCACCTTCTTCCTGGCCCTGGTGGATTGTACTTCC
TCTGTCACCTTCTTGCCCTTCATGAGCCAGCTGCCCACGTACTATCTTACCACCTTCTTTATAG
GCGAGGGGCTCAGTGGCCTCCTGCCTGCACTGGTGGCCCTTGTCCAAGGCTCAGGTATCACCAC
CTGTGTCAATGTCACGGAGACACCAGGTACCACCTTGAACCCTGTGACCACTATGGAGACTTCC
ATCACTCAGAGAACCCTTAGCCCTTCCCTGACGCCCCTCACCTGGCACCTGGAGAGCCGCTACC
TGGCCCCACGCTTCTCGCCACTGCTCTTCTTCTTACTGCTCTCCTTCCTGATGGGCTGCTGCCT
GGTCGCCTTCTTCCTCCTGCAGCGGCAGCCCTGGGGACGGCAAGGCTCCATAGAGGACCTCCTC
CACTCCCAGGTCACCCTGCACTCGATCAAACCACGTGACACAGAGGACACCGGCTCAGTGGGCG
CCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAAGTCAGTGTAGCTTCACTCCGCCCAGCCCA
GCTGGCCTTCATCTACTCCGTGGTAGCCTTTGTCAATGCGCTCACCAATGGTGTTCTGCCCTCA
GTGCAGACCTACTCCTGCCTGCCTTATGGGCCTGTTGCCTACCATCTGTCTGCCACCCTCAGCT
CCGTGGCCAGCCCCCTCGCCTGCTTCCTCCCCATCTTCCTGCCTAACAGGTCGCTGTTATTCCT
GGGGGTGCTCACAGTGTTGGGGACTGGCTTTGGGACCTACAATATGGCCATGGCTGCTATGAGC
CCCTGCCCCATCCTGCAGGGTCACTGGGGTGGAGAAGTCCTTATCGTGCTCTCCTGGATGCTGT
TTGTAGCCTGTCTCAGCTATGTCAAGGTGATGCTGGGTGTGATCTTGCGTGATCGGAGTCGCAG
CGCCCTCTTGTGGTGTGGGGCAGCAGTGCAGCTGGGCTCTCTGATTGGTGCCCTGCTCATGTTC
CCGCTGGTTAATGTACTGAAACTCTTCTCATCTGCTGACTACTGCAGCCTGGACTGCTCAGCCT
AGGCTCGCCTGGCCACCACAGGACACCAGGTACCCCCATTGCTGAAGTTAAAAGCCAGAAGAGC
CCAGAGACACAAAGGGTAACAACCCTTTGCCCTACTACCCCCACCCCAACCAACCCCAATCCCA
CATGGTCACAGATCTGGGTTTGGGGAGCAGCAAGGCTAGGCCTGAGCTTTTTAACACAATGACC
TCCTCCCAACCTGGAGTTTCACAGTGCAGCCCCTCCCCCAACCCTGTGACCCAGTGCGTTTGAG
CTGCAGTCTTCATTCTCAGTCTTTGGAGAGATCCGGTTTGTAGCGATCAGCTGGAGGCAGCCTA
AGGATGTTAGGGGAAGATCCCTGGAAGATTAAGCTGCCCCTTGCTTACTGTGAGACCTTGGGGA
AGTCTCTTTACTCTCTAGGCCTCTGCTCATTAAAGGAGGGCTGTAGTAAACAGCCTTTCGCTTG
TAGGCTTAGGCATCTAACAGGTTCTCCTGAACTCTCTCCTCTGTGGACACACTTCTTAATACAA
CCTGGAGGTGATCAGAGGACTTGTGCAGGACCCTACCTCCATCCCTCTTCTACATCCCAAGCCT
GTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTCCCTGTCTCCTAGGATGGTGAGACACTGAG
AGGAGTTGGGGTGGGGGGGCCTGCATCTGAGAGTAATCACGCCTCCCCCCAGACACATAGTGGC
CAGTGAGGACCTCAGAGGGGTGGCTCAGGCAGAATGAGTTTCATCTGTAATTATTACTTTGTTT
TGCATTTTGTTCCTTTTTATAAAAATTAAAGCTGTCTGTGCTTTCAAAAAAAAAAAAAAAAAAA
AAAAAA

hide sequence

RefSeq Acc Id:

XM_006235238 ⟹ XP_006235300

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,924 - 140,514,099 (+)	NCBI
Rnor_6.0	3	147,503,266 - 147,516,192 (+)	NCBI
Rnor_5.0	3	153,853,145 - 153,866,321 (+)	NCBI

Sequence:

show sequence

CGCTTGCTAGGCAAGCCCTCTACCACTGAGCTAAATCCCCAACTCCCTGAGACCTTTTTTGATG
CACATAAATTAGCGTCGGATATTTTTAAAGTGTGTTAAAACTCAGGCTTTTGCGCCCCCTGGCG
GCTGCTCCCGTGAACTGCAGTGGCGCCTTCGCGCCTGATCTTCCTACTCGAGGGCGCGGTCAGG
AAGCTGCGCCCGCCGGTAGTGCGCCTAGAAGCTTCTTGGGCGACCAGGCCAGATGTGGACAGAT
TGGTCTCTGCTTTTGAGGTTCTCTACAGAATGTGAGCACCACCTCGAGTTGCCCGAGGCTCTAC
ATATTTGCAGGAGATTCTGCCCCACCCCCGACTTGTTCCCGCGGGAAGAAGAGAGGCGGGATGC
AGAAGGCTCAGGTCCTGCGGGCTTCAAGCAGTAGCTCCTGAGTGCTGTCACTCGGCCACTCCCG
GGTCCCGCCTACCTTCCCGCCACCGGGGCGGGGACAGACAGGTGCCGCCACAGACTCCTGAATC
CACCGAGCAGGCAGACCCTCCGTGACCCTAGGTGGGTTTCCTGTGTAGGAACCAGGGAAAGAAG
CTGACAAAACACCAAAGATTCCTGGGTGAAGCTTGACCAGGAGAAAGCTCTCTCCACCCCCCTG
CAGCCTGACCTGGAGGACAGGATATCGTCTGGCCCAGGCTGCCCACAATGGCCTTCCTGACACA
CCTGCTGGTCTGCGTCTTTGGCATGGGCTCCTGGGTGGCCATCAATGGGCTCTGGGTGGAGCTG
CCCCTGCTGGTGACCAAGTTGCCCGAGGGCTGGTACTTGCCCTCTTACCTAACTGTGGTCATCC
AACTGGCCAACATAGGCCCCCTCCTAGTCACCCTGATGCATCGCTTCCGACCCGGCTGCCTGTC
TGAGGTGCCCGTGATCTTCCTTATCCTGTGTGTAGGCACAACTGCCTGCATCCTCCTAGCCTTC
CTGTGGAGTATGACCTCCTGGATACAGGGTAGACAGCATAGTGTGGCCTTCATCGTCCTCACCT
TCTTCCTGGCCCTGGTGGATTGTACTTCCTCTGTCACCTTCTTGCCCTTCATGAGCCAGCTGCC
CACGTACTATCTTACCACCTTCTTTATAGGCGAGGGGCTCAGTGGCCTCCTGCCTGCACTGGTG
GCCCTTGTCCAAGGCTCAGGTATCACCACCTGTGTCAATGTCACGGAGACACCAGGTACCACCT
TGAACCCTGTGACCACTATGGAGACTTCCATCACTCAGAGAACCCTTAGCCCTTCCCTGACGCC
CCTCACCTGGCACCTGGAGAGCCGCTACCTGGCCCCACGCTTCTCGCCACTGCTCTTCTTCTTA
CTGCTCTCCTTCCTGATGGGCTGCTGCCTGGTCGCCTTCTTCCTCCTGCAGCGGCAGCCCTGGG
GACGGCAAGGCTCCATAGAGGACCTCCTCCACTCCCAGGTCACCCTGCACTCGATCAAACCACG
TGACACAGAGGACACCGGCTCAGTGGGCGCCCCTGTGAGCAGCCCAGGCAAGGGATCAGTGGAA
GTCAGTGTAGCTTCACTCCGCCCAGCCCAGCTGGCCTTCATCTACTCCGTGGTAGCCTTTGTCA
ATGCGCTCACCAATGGTGTTCTGCCCTCAGTGCAGACCTACTCCTGCCTGCCTTATGGGCCTGT
TGCCTACCATCTGTCTGCCACCCTCAGCTCCGTGGCCAGCCCCCTCGCCTGCTTCCTCCCCATC
TTCCTGCCTAACAGGTCGCTGTTATTCCTGGGGGTGCTCACAGTGTTGGGGACTGGCTTTGGGA
CCTACAATATGGCCATGGCTGCTATGAGCCCCTGCCCCATCCTGCAGGGTCACTGGGGTGGAGA
AGTCCTTATCGTGCTCTCCTGGATGCTGTTTGTAGCCTGTCTCAGCTATGTCAAGGTGATGCTG
GGTGTGATCTTGCGTGATCGGAGTCGCAGCGCCCTCTTGTGGTGTGGGGCAGCAGTGCAGCTGG
GCTCTCTGATTGGTGCCCTGCTCATGTTCCCGCTGGTTAATGTACTGAAACTCTTCTCATCTGC
TGACTACTGCAGCCTGGACTGCTCAGCCTAGGCTCGCCTGGCCACCACAGGACACCAGGTACCC
CCATTGCTGAAGTTAAAAGCCAGAAGAGCCCAGAGACACAAAGGGTAACAACCCTTTGCCCTAC
TACCCCCACCCCAACCAACCCCAATCCCACATGGTCACAGATCTGGGTTTGGGGAGCAGCAAGG
CTAGGCCTGAGCTTTTTAACACAATGACCTCCTCCCAACCTGGAGTTTCACAGTGCAGCCCCTC
CCCCAACCCTGTGACCCAGTGCGTTTGAGCTGCAGTCTTCATTCTCAGTCTTTGGAGAGATCCG
GTTTGTAGCGATCAGCTGGAGGCAGCCTAAGGATGTTAGGGGAAGATCCCTGGAAGATTAAGCT
GCCCCTTGCTTACTGTGAGACCTTGGGGAAGTCTCTTTACTCTCTAGGCCTCTGCTCATTAAAG
GAGGGCTGTAGTAAACAGCCTTTCGCTTGTAGGCTTAGGCATCTAACAGGTTCTCCTGAACTCT
CTCCTCTGTGGACACACTTCTTAATACAACCTGGAGGTGATCAGAGGACTTGTGCAGGACCCTA
CCTCCATCCCTCTTCTACATCCCAAGCCTGTTGGTCCTGGGTCCCAGTACAGCCCTCTGCCTTC
CCTGTCTCCTAGGATGGTGAGACACTGAGAGGAGTTGGGGTGGGGGGGCCTGCATCTGAGAGTA
ATCACGCCTCCCCCCAGACACATAGTGGCCAGTGAGGACCTCAGAGGGGTGGCTCAGGCAGAAT
GAGTTTCATCTGTAATTATTACTTTGTTTTGCATTTTGTTCCTTTTTATAAAAATTAAAGCTGT
CTGTGCTTTCACACTA

hide sequence

RefSeq Acc Id:

XM_039105052 ⟹ XP_038960980

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,935 - 140,514,099 (+)	NCBI

RefSeq Acc Id:

XM_039105053 ⟹ XP_038960981

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,935 - 140,515,845 (+)	NCBI

RefSeq Acc Id:

XM_039105054 ⟹ XP_038960982

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,935 - 140,514,099 (+)	NCBI

RefSeq Acc Id:

XM_039105055 ⟹ XP_038960983

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,935 - 140,514,099 (+)	NCBI

RefSeq Acc Id:

XM_039105056 ⟹ XP_038960984

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,935 - 140,514,099 (+)	NCBI

RefSeq Acc Id:

XM_039105057 ⟹ XP_038960985

RefSeq Status:

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,933 - 140,514,102 (+)	NCBI

RefSeq Acc Id:

XR_005501890

RefSeq Status:

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	3	140,498,933 - 140,515,845 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001032275	(Get FASTA)	NCBI Sequence Viewer
	XP_006235300	(Get FASTA)	NCBI Sequence Viewer
	XP_038960980	(Get FASTA)	NCBI Sequence Viewer
	XP_038960981	(Get FASTA)	NCBI Sequence Viewer
	XP_038960982	(Get FASTA)	NCBI Sequence Viewer
	XP_038960983	(Get FASTA)	NCBI Sequence Viewer
	XP_038960984	(Get FASTA)	NCBI Sequence Viewer
	XP_038960985	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH99097	(Get FASTA)	NCBI Sequence Viewer
	EDL86087	(Get FASTA)	NCBI Sequence Viewer
	Q4FZU9	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001032275 ⟸ NM_001037198

- UniProtKB:

Q4FZU9 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MAFLTHLLVCVFGMGSWVAINGLWVELPLLVTKLPEGWYLPSYLTVVIQLANTGPLLVTLMHRF
RPGCLSEVPVIFLILCVGTTACILLAFLWSMTSWIQGRQHSVAFIVLTFFLALVDCTSSVTFLP
FMSQLPTYYLTTFFIGEGLSGLLPALVALVQGSGITTCVNVTETPGTTLNPVTTMETSITQRTL
SPSLTPLTWHLESRYLAPRFSPLLFFLLLSFLMGCCLVAFFLLQRQPWGRQGSIEDLLHSQVTL
HSIKPRDTEDTGSVGAPVSSPGKGSVEVSVASLRPAQLAFIYSVVAFVNALTNGVLPSVQTYSC
LPYGPVAYHLSATLSSVASPLACFLPIFLPNRSLLFLGVLTVLGTGFGTYNMAMAAMSPCPILQ
GHWGGEVLIVLSWMLFVACLSYVKVMLGVILRDRSRSALLWCGAAVQLGSLIGALLMFPLVNVL
KLFSSADYCSLDCSA

hide sequence

RefSeq Acc Id:	XP_006235300 ⟸ XM_006235238
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAFLTHLLVCVFGMGSWVAINGLWVELPLLVTKLPEGWYLPSYLTVVIQLANIGPLLVTLMHRF RPGCLSEVPVIFLILCVGTTACILLAFLWSMTSWIQGRQHSVAFIVLTFFLALVDCTSSVTFLP FMSQLPTYYLTTFFIGEGLSGLLPALVALVQGSGITTCVNVTETPGTTLNPVTTMETSITQRTL SPSLTPLTWHLESRYLAPRFSPLLFFLLLSFLMGCCLVAFFLLQRQPWGRQGSIEDLLHSQVTL HSIKPRDTEDTGSVGAPVSSPGKGSVEVSVASLRPAQLAFIYSVVAFVNALTNGVLPSVQTYSC LPYGPVAYHLSATLSSVASPLACFLPIFLPNRSLLFLGVLTVLGTGFGTYNMAMAAMSPCPILQ GHWGGEVLIVLSWMLFVACLSYVKVMLGVILRDRSRSALLWCGAAVQLGSLIGALLMFPLVNVL KLFSSADYCSLDCSA hide sequence

RefSeq Acc Id:

ENSRNOP00000006828 ⟸ ENSRNOT00000006828

RefSeq Acc Id:

ENSRNOP00000074344 ⟸ ENSRNOT00000082438

RefSeq Acc Id:	XP_038960985 ⟸ XM_039105057
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038960981 ⟸ XM_039105053
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960982 ⟸ XM_039105054
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960983 ⟸ XM_039105055
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960980 ⟸ XM_039105052
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038960984 ⟸ XM_039105056
- Peptide Label:	isoform X1
- UniProtKB:	G3V6N3 (UniProtKB/TrEMBL)

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4FZU9-F1-model_v2	AlphaFold	Q4FZU9	1-463	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304644	AgrOrtholog
BioCyc Gene	G2FUF-47285	BioCyc
Ensembl Genes	ENSRNOG00000005132	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein	ENSRNOP00000006828	ENTREZGENE
	ENSRNOP00000006828.4	UniProtKB/TrEMBL
	ENSRNOP00000074344.2	UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000006828	ENTREZGENE
	ENSRNOT00000006828.5	UniProtKB/TrEMBL
	ENSRNOT00000082438.2	UniProtKB/TrEMBL
IMAGE_CLONE	IMAGE:7459579	IMAGE-MGC_LOAD
InterPro	Riboflavin_transptr	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	rno:311536	UniProtKB/Swiss-Prot
MGC_CLONE	MGC:116234	IMAGE-MGC_LOAD
NCBI Gene	311536	ENTREZGENE
PANTHER	PTHR12929	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	SOLUTE CARRIER FAMILY 52, RIBOFLAVIN TRANSPORTER, MEMBER 3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	DUF1011	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Slc52a3	PhenoGen
UniProt	A0A0G2K7T9_RAT	UniProtKB/TrEMBL
	G3V6N3	ENTREZGENE, UniProtKB/TrEMBL
	Q4FZU9	ENTREZGENE, UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2016-02-24	Slc52a3	solute carrier family 52 member 3	Slc52a3	solute carrier family 52, riboflavin transporter, member 3	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2012-10-10	Slc52a3	solute carrier family 52, riboflavin transporter, member 3	RGD1304644	similar to RIKEN cDNA 2310046K01	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-12-06	RGD1304644	similar to RIKEN cDNA 2310046K01	RGD1304644_predicted	similar to RIKEN cDNA 2310046K01 (predicted)	Symbol and Name updated	1559027	APPROVED
2005-01-20	RGD1304644_predicted	similar to RIKEN cDNA 2310046K01 (predicted)	LOC311536_predicted		Symbol and Name status set to approved	1331353	APPROVED
2005-01-12	LOC311536_predicted	similar to RIKEN cDNA 2310046K01 (predicted)			Symbol and Name status set to provisional	70820	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - CTD

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