Pm20d2 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 5 | 52,362,384 - 52,382,647 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 47,566,059 - 47,586,334 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 47,566,072 - 47,586,212 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 49,712,103 - 49,732,173 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 51,311,289 - 51,331,359 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 51,254,978 - 51,275,034 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 48,416,005 - 48,437,054 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 48,420,302 - 48,436,531 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 52,998,671 - 53,019,507 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 49,472,136 - 49,481,017 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 49,467,315 - 49,483,485 (-) | NCBI | | | | | Celera | 5 | 46,322,990 - 46,344,463 (-) | NCBI | | Celera | | | Cytogenetic Map | 5 | q21 | NCBI | | | | |
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PM20D2 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 6 | 89,093,940 - 89,165,565 (+) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 6 | 89,146,055 - 89,165,565 (+) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 6 | 89,855,774 - 89,875,284 (+) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 6 | 89,912,488 - 89,932,003 (+) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Celera | 6 | 90,273,652 - 90,293,174 (+) | NCBI | | Celera | | | Cytogenetic Map | 6 | q15 | NCBI | | | | | HuRef | 6 | 87,071,380 - 87,091,359 (+) | NCBI | | HuRef | | | CHM1_1 | 6 | 89,953,721 - 89,973,244 (+) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 6 | 90,329,918 - 90,374,228 (+) | NCBI | | T2T-CHM13v2.0 | | |
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Pm20d2 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 33,170,309 - 33,189,732 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 33,174,230 - 33,189,737 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 33,170,401 - 33,189,737 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 33,174,230 - 33,189,737 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 33,257,376 - 33,276,712 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 33,510,233 - 33,518,350 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 32,921,441 - 32,940,787 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | A5 | NCBI | | | | | cM Map | 4 | 14.71 | NCBI | | | | |
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Pm20d2 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955411 | 15,932,365 - 15,945,579 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955411 | 15,932,367 - 15,943,946 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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PM20D2 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 5 | 109,224,811 - 109,245,658 (+) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 6 | 107,125,128 - 107,145,832 (+) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 6 | 87,021,249 - 87,040,809 (+) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 6 | 90,296,747 - 90,316,025 (+) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 6 | 90,296,808 - 90,312,728 (+) | Ensembl | panpan1.1 | | panPan2 | |
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PM20D2 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 12 | 48,402,912 - 48,416,239 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 12 | 48,339,346 - 48,415,732 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 12 | 48,209,331 - 48,222,232 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 12 | 49,209,225 - 49,222,198 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 12 | 49,209,124 - 49,222,655 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 12 | 48,527,261 - 48,540,363 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 12 | 48,425,713 - 48,438,831 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 12 | 48,617,962 - 48,631,084 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Pm20d2 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404946 | 83,412,615 - 83,429,270 (+) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936510 | 3,041,592 - 3,058,513 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936510 | 3,041,598 - 3,058,193 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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PM20D2 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 1 | 57,188,336 - 57,219,233 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 1 | 57,188,019 - 57,219,243 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 1 | 63,965,900 - 63,996,614 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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PM20D2 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 13 | 13,900,702 - 13,922,217 (+) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 13 | 13,902,015 - 13,919,532 (+) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666040 | 190,217,625 - 190,239,751 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Pm20d2 (Heterocephalus glaber - naked mole-rat) |
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