Ttpa (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCr8 | 5 | 38,294,415 - 38,315,471 (+) | NCBI | | GRCr8 | | | mRatBN7.2 | 5 | 33,497,537 - 33,518,936 (+) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 5 | 33,497,137 - 33,518,073 (+) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 5 | 35,611,035 - 35,631,425 (+) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 5 | 37,203,240 - 37,223,637 (+) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 5 | 37,142,746 - 37,163,146 (+) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 5 | 34,007,926 - 34,029,315 (+) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 5 | 34,007,920 - 34,028,452 (+) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 5 | 38,661,259 - 38,681,785 (+) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 5 | 34,638,551 - 34,659,077 (+) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 5 | 34,638,729 - 34,659,256 (+) | NCBI | | | | | Celera | 5 | 32,573,008 - 32,593,536 (+) | NCBI | | Celera | | | Cytogenetic Map | 5 | q13 | NCBI | | | | |
|
TTPA (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
---|
GRCh38 | 8 | 63,058,409 - 63,086,053 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 8 | 63,048,553 - 63,086,053 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 8 | 63,970,968 - 63,998,612 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 8 | 64,135,985 - 64,161,166 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 8 | 64,135,984 - 64,161,166 | NCBI | | | | | Celera | 8 | 59,962,246 - 59,988,643 (-) | NCBI | | Celera | | | Cytogenetic Map | 8 | q12.3 | NCBI | | | | | HuRef | 8 | 59,459,917 - 59,486,481 (-) | NCBI | | HuRef | | | CHM1_1 | 8 | 64,025,060 - 64,051,623 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 8 | 63,482,981 - 63,510,623 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Ttpa (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 4 | 20,007,889 - 20,030,823 (+) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 4 | 20,007,938 - 20,030,785 (+) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 4 | 20,007,894 - 20,030,822 (+) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 4 | 20,007,938 - 20,030,785 (+) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 4 | 19,935,575 - 19,957,932 (+) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 4 | 19,935,575 - 19,957,932 (+) | NCBI | | MGSCv36 | mm8 | | Celera | 4 | 19,766,254 - 19,788,914 (+) | NCBI | | Celera | | | Cytogenetic Map | 4 | A3 | NCBI | | | | | cM Map | 4 | 7.76 | NCBI | | | | |
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Ttpa (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChiLan1.0 Ensembl | NW_004955444 | 15,869,940 - 15,894,544 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955444 | 15,877,972 - 15,891,949 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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TTPA (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
NHGRI_mPanPan1-v2 | 7 | 78,785,141 - 78,813,436 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 8 | 54,424,191 - 54,452,443 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 8 | 59,591,592 - 59,619,658 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 8 | 61,266,954 - 61,293,165 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 8 | 61,266,954 - 61,293,699 (-) | Ensembl | panpan1.1 | | panPan2 | |
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TTPA (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
CanFam3.1 | 29 | 13,177,690 - 13,198,910 (-) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 29 | 13,182,308 - 13,192,553 (-) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 29 | 13,507,263 - 13,526,254 (-) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 29 | 13,283,050 - 13,302,075 (-) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 29 | 13,283,050 - 13,302,076 (-) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 29 | 13,294,501 - 13,313,489 (-) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 29 | 13,412,121 - 13,431,143 (-) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 29 | 13,677,780 - 13,696,792 (-) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Ttpa (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
HiC_Itri_2 | NW_024405303 | 64,318,193 - 64,375,529 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936496 | 10,454,605 - 10,465,301 (+) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936496 | 10,409,948 - 10,466,722 (+) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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TTPA (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
Sscrofa11.1 Ensembl | 4 | 70,961,465 - 70,980,876 (+) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 4 | 70,960,580 - 70,980,883 (+) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 4 | 77,238,492 - 77,250,293 (+) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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TTPA (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
---|
ChlSab1.1 | 8 | 58,952,685 - 58,979,083 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 8 | 58,950,626 - 58,978,258 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666039 | 82,604,603 - 82,632,422 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Ttpa (Heterocephalus glaber - naked mole-rat) |
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