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Gene: Aifm2 (AIF family member 2) Rattus norvegicus

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Symbol:

Aifm2

Name:

AIF family member 2

RGD ID:

1304964

Description:

Predicted to enable several functions, including electron-transferring-flavoprotein dehydrogenase activity; flavin adenine dinucleotide binding activity; and oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor. Predicted to be involved in several processes, including negative regulation of ferroptosis; regulation of cellular response to oxidative stress; and ubiquinone metabolic process. Predicted to act upstream of or within vitamin K metabolic process. Predicted to be located in several cellular components, including cytosol; lipid droplet; and mitochondrial outer membrane. Predicted to be active in mitochondrial membrane. Orthologous to human AIFM2 (AIF family member 2); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-di-tert-butyl-4-methylphenol; 6-propyl-2-thiouracil.

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

Amid; apoptosis inducing factor, mitochondria associated 2; apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death; apoptosis-inducing factor 2; apoptosis-inducing factor, mitochondrion-associated 2; ferroptosis suppressor protein 1; LOC361843; Prg3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	AIFM2 (AIF family member 2)	HGNC	Ensembl, HomoloGene, Inparanoid, NCBI
Mus musculus (house mouse):	Aifm2 (apoptosis-inducing factor, mitochondrion-associated 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Aifm2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	AIFM2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	AIFM2 (apoptosis inducing factor mitochondria associated 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Aifm2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	AIFM2 (apoptosis inducing factor mitochondria associated 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	AIFM2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Aifm2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus rattus (black rat):	Aifm2 (AIF family member 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Homo sapiens (human):	AIFM2 (AIF family member 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Mus musculus (house mouse):	Aifm2 (apoptosis-inducing factor, mitochondrion-associated 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	aifm2 (apoptosis inducing factor mitochondria associated 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	AIF1	Alliance	DIOPT (InParanoid\|OrthoFinder\|PANTHER\|SonicParanoid)
Saccharomyces cerevisiae (baker's yeast):	AIF1	Alliance	DIOPT (InParanoid\|OrthoFinder\|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):	aifm2	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCr8 - GRCr8 Assembly

Position:

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	30,195,781 - 30,222,014 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	30,193,829 - 30,220,957 (+)	Ensembl				GRCr8
mRatBN7.2	20	29,654,283 - 29,679,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	29,652,927 - 29,679,236 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	30,676,029 - 30,689,153 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	30,067,240 - 30,080,368 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	30,809,721 - 30,822,853 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	31,329,047 - 31,353,548 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	31,339,787 - 31,352,906 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	29,089,730 - 29,104,084 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	31,091,780 - 31,104,758 (+)	NCBI		Celera
RGSC_v3.1	20	29,092,816 - 29,117,878 (+)	NCBI
Cytogenetic Map	20	q11	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(1->4)-beta-D-glucan (ISO)

1-[2-(3,4-dichlorophenyl)ethyl]-4-methylpiperazine (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,6-di-tert-butyl-4-methylphenol (EXP)

3,3',4,4'-tetrachlorobiphenyl (ISO)

3-isobutyl-1-methyl-7H-xanthine (ISO)

4,4'-sulfonyldiphenol (ISO)

4-hydroxyphenyl retinamide (ISO)

6-propyl-2-thiouracil (EXP)

acrylamide (ISO)

actinomycin D (ISO)

aflatoxin B1 (EXP)

aldrin (ISO)

amitrole (EXP)

aristolochic acid A (ISO)

arsane (ISO)

arsenic atom (ISO)

benzo[a]pyrene (ISO)

beta-naphthoflavone (ISO)

bisphenol A (EXP,ISO)

bisphenol AF (ISO)

Bisphenol B (ISO)

bisphenol F (ISO)

bortezomib (ISO)

C60 fullerene (EXP)

cadmium atom (ISO)

cadmium dichloride (ISO)

cadmium sulfide (ISO)

CGP 52608 (ISO)

chlordecone (ISO)

chloroacetaldehyde (ISO)

chlorpyrifos (ISO)

cisplatin (ISO)

clodronic acid (ISO)

cobalt dichloride (ISO)

cocaine (ISO)

copper atom (ISO)

copper(0) (ISO)

copper(II) chloride (ISO)

copper(II) sulfate (ISO)

Cuprizon (EXP)

cyclosporin A (EXP,ISO)

dexamethasone (ISO)

dibenz[a,h]anthracene (ISO)

Dibutyl phosphate (ISO)

dibutyl phthalate (EXP)

dichloroacetic acid (ISO)

dieldrin (EXP)

dimethyl fumarate (EXP)

dioxygen (ISO)

dorsomorphin (ISO)

doxorubicin (EXP)

endosulfan (ISO)

epoxiconazole (ISO)

ethanol (ISO)

ethyl methanesulfonate (ISO)

fenofibrate (EXP,ISO)

ferrostatin-1 (ISO)

fulvestrant (ISO)

GSK-J4 (ISO)

hydrogen peroxide (EXP,ISO)

hydroquinone (ISO)

ibuprofen (EXP,ISO)

inulin (ISO)

lead diacetate (EXP,ISO)

lead(0) (EXP)

manganese atom (ISO)

manganese(0) (ISO)

manganese(II) chloride (ISO)

metformin (EXP)

methimazole (EXP)

methotrexate (ISO)

methyl methanesulfonate (ISO)

methylglyoxal (ISO)

mono(2-ethylhexyl) phthalate (ISO)

nickel dichloride (EXP)

Nutlin-3 (ISO)

ochratoxin A (ISO)

okadaic acid (ISO)

paracetamol (ISO)

perfluorohexanesulfonic acid (ISO)

perfluorooctane-1-sulfonic acid (ISO)

phenobarbital (EXP)

phenylmercury acetate (ISO)

pirinixic acid (ISO)

pregnenolone 16alpha-carbonitrile (EXP)

rotenone (EXP)

SB 431542 (ISO)

sodium arsenite (ISO)

sulfadimethoxine (EXP)

sulindac (ISO)

sunitinib (ISO)

tetrachloromethane (EXP)

titanium dioxide (ISO)

tributylstannane (ISO)

trichloroethene (ISO)

triphenyl phosphate (ISO)

troglitazone (EXP)

tunicamycin (ISO)

urethane (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic mitochondrial changes (IBA,IEA,ISO)

cellular detoxification (IEA,ISO)

negative regulation of ferroptosis (IBA,IEA,ISO)

positive regulation of apoptotic process (IBA,IEA,ISO)

regulation of cellular response to oxidative stress (IEA,ISO)

respiratory electron transport chain (IEA)

ubiquinone metabolic process (IEA,ISO)

vitamin K metabolic process (IEA,ISO)

Cellular Component

cytoplasm (IBA,IEA,ISO)

cytosol (IEA,ISO)

lipid droplet (IEA,ISO)

mitochondrial membrane (IBA,IEA,ISO)

mitochondrial outer membrane (IEA,ISO)

mitochondrion (IEA,ISO)

nucleus (IEA,ISO)

plasma membrane (IEA,ISO)

Molecular Function

DNA binding (IEA,ISO)

electron-transferring-flavoprotein dehydrogenase activity (IBA,IEA,ISO)

flavin adenine dinucleotide binding (IBA,IEA,ISO)

oxidoreductase activity (IEA)

oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (IEA,ISO)

protein binding (ISO)

References

References - curated

#	Reference Title	Reference Citation
1.	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.	Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2.	Rat ISS GO annotations from GOA human gene data--August 2006	GOA data from the GO Consortium
3.	ClinVar Automated Import and Annotation Pipeline	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:8889548	PMID:11980907	PMID:12135761	PMID:12947022	PMID:14741744	PMID:15958387	PMID:16186796	PMID:18614015	PMID:22664934	PMID:26689472	PMID:31634899	PMID:31634900

Genomics

Comparative Map Data

Aifm2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	30,195,781 - 30,222,014 (+)	NCBI	GRCr8	GRCr8		GRCr8
GRCr8 Ensembl	20	30,193,829 - 30,220,957 (+)	Ensembl				GRCr8
mRatBN7.2	20	29,654,283 - 29,679,239 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	29,652,927 - 29,679,236 (+)	Ensembl				mRatBN7.2
UTH_Rnor_SHR_Utx	20	30,676,029 - 30,689,153 (+)	NCBI	UTH_Rnor_SHR_Utx	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	30,067,240 - 30,080,368 (+)	NCBI	UTH_Rnor_SHRSP_BbbUtx_1.0	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	30,809,721 - 30,822,853 (+)	NCBI	UTH_Rnor_WKY_Bbb_1.0	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	31,329,047 - 31,353,548 (+)	NCBI	Rnor_6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	31,339,787 - 31,352,906 (+)	Ensembl			rn6	Rnor6.0
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI	Rnor_5.0	Rnor_5.0	rn5
RGSC_v3.4	20	29,089,730 - 29,104,084 (+)	NCBI	RGSC_v3.4	RGSC_v3.4	rn4
Celera	20	31,091,780 - 31,104,758 (+)	NCBI		Celera
RGSC_v3.1	20	29,092,816 - 29,117,878 (+)	NCBI
Cytogenetic Map	20	q11	NCBI

AIFM2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	70,112,271 - 70,132,825 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	70,097,053 - 70,133,269 (-)	Ensembl			hg38	GRCh38
GRCh37	10	71,872,027 - 71,892,581 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	71,542,036 - 71,562,696 (-)	NCBI	Build 36	Build 36	hg18	NCBI36
Celera	10	65,151,142 - 65,171,802 (-)	NCBI		Celera
Cytogenetic Map	10	q22.1	NCBI
HuRef	10	65,864,657 - 65,885,178 (-)	NCBI		HuRef
CHM1_1	10	72,154,045 - 72,174,696 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	70,981,272 - 71,001,807 (-)	NCBI		T2T-CHM13v2.0

Aifm2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	61,551,042 - 61,575,474 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	61,551,042 - 61,575,039 (+)	Ensembl		GRCm39 Ensembl		GRCm39
GRCm38	10	61,715,263 - 61,739,260 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	61,715,263 - 61,739,260 (+)	Ensembl			mm10	GRCm38
MGSCv37	10	61,178,011 - 61,202,008 (+)	NCBI	MGSCv37	MGSCv37	mm9	NCBIm37
MGSCv36	10	61,110,645 - 61,134,617 (+)	NCBI		MGSCv36	mm8
Celera	10	62,816,777 - 62,840,752 (+)	NCBI		Celera
Cytogenetic Map	10	B4	NCBI
cM Map	10	32.27	NCBI

Aifm2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	21,110,798 - 21,126,482 (+)	Ensembl
ChiLan1.0	NW_004955437	21,111,298 - 21,126,487 (+)	NCBI	ChiLan1.0	ChiLan1.0

AIFM2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	82,209,189 - 82,286,359 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	82,213,225 - 82,308,666 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	66,529,411 - 66,621,122 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	69,114,188 - 69,135,265 (-)	NCBI	PanPan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	69,114,194 - 69,135,267 (-)	Ensembl			panPan2	panpan1.1

AIFM2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	4	21,086,778 - 21,104,127 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	4	21,087,339 - 21,104,172 (-)	Ensembl			canFam3	CanFam3.1
Dog10K_Boxer_Tasha	4	21,219,576 - 21,236,813 (-)	NCBI	Dog10K_Boxer_Tasha	Dog10K_Boxer_Tasha
ROS_Cfam_1.0	4	21,362,486 - 21,379,970 (-)	NCBI	ROS_Cfam_1.0	ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	4	21,363,074 - 21,380,942 (-)	Ensembl				ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	4	21,260,186 - 21,277,608 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	4	21,465,343 - 21,482,591 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	4	21,816,121 - 21,833,576 (-)	NCBI	UU_Cfam_GSD_1.0	UU_Cfam_GSD_1.0

Aifm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	59,973,364 - 59,981,473 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936521	8,466,086 - 8,474,198 (+)	Ensembl		SpeTri2.0 Ensembl
SpeTri2.0	NW_004936521	8,466,089 - 8,474,198 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

AIFM2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	73,055,228 - 73,074,567 (-)	Ensembl			susScr11	Sscrofa11.1
Sscrofa11.1	14	73,054,433 - 73,074,605 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	78,974,255 - 78,993,913 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

AIFM2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	61,174,125 - 61,197,848 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	61,182,826 - 61,195,769 (+)	Ensembl		ChlSab1.1 Ensembl	chlSab2	Vervet-AGM
Vero_WHO_p1.0	NW_023666048	21,913,157 - 21,936,632 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Aifm2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	4,276,928 - 4,301,365 (-)	Ensembl		HetGla_female_1.0 Ensembl	hetGla2	HetGla_female_1.0 Ensembl
HetGla 1.0	NW_004624754	4,276,579 - 4,301,058 (-)	NCBI	HetGla 1.0	HetGla 1.0	hetGla2

Aifm2
(Rattus rattus - black rat)

Black Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Black Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Rrattus_CSIRO_v1	18	27,536,044 - 27,560,461 (+)	NCBI		Rrattus_CSIRO_v1

Variants

Variants in Aifm2
221 total Variants

miRNA Target Status (No longer updated)

Predicted Target Of

	Summary Value
Count of predictions:	603
Count of miRNA genes:	294
Interacting mature miRNAs:	377
Transcripts:	ENSRNOT00000035982
Prediction methods:	Microtar, Miranda, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCr8)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4889610	Pancm3	Pancreatic morphology QTL 3	3.75	0.001	pancreas mass (VT:0010144)	pancreas wet weight (CMO:0000626)	20	4189476	49189476	Rat
2303587	Bw93	Body weight QTL 93	13		body mass (VT:0001259)	body weight (CMO:0000012)	20	26689362	56021148	Rat
1641915	Colcr9	Colorectal carcinoma resistance QTL 9	2.97	0.0024	intestine integrity trait (VT:0010554)	benign colorectal tumor number (CMO:0001795)	20	1	33724594	Rat
7411668	Foco32	Food consumption QTL 32	8	0.001	eating behavior trait (VT:0001431)	feed conversion ratio (CMO:0001312)	20	1	36600300	Rat
2305926	Iddm37	Insulin dependent diabetes mellitus QTL 37	6		blood glucose amount (VT:0000188)	plasma glucose level (CMO:0000042)	20	1533083	46533083	Rat
1558640	Prcs2	Prostate cancer susceptibility QTL 2	3.3		prostate integrity trait (VT:0010571)	percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)	20	1	34066551	Rat
2303626	Vencon10	Ventilatory control QTL 10		0.001	respiration trait (VT:0001943)	respiration rate (CMO:0000289)	20	20745585	56021148	Rat
1598869	Memor6	Memory QTL 6	3.1		exploratory behavior trait (VT:0010471)	total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)	20	26689362	56021148	Rat
1598870	Bp289	Blood pressure QTL 289	2.4		arterial blood pressure trait (VT:2000000)	systolic blood pressure (CMO:0000004)	20	8216359	53216359	Rat
1598858	Cm61	Cardiac mass QTL 61	3.6		heart mass (VT:0007028)	heart weight to body weight ratio (CMO:0000074)	20	8216359	53216359	Rat
1331747	Hrtrt16	Heart rate QTL 16	3.163		heart pumping trait (VT:2000009)	heart rate (CMO:0000002)	20	26792353	56021148	Rat
1598816	Memor12	Memory QTL 12	2.4		exploratory behavior trait (VT:0010471)	average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)	20	12243242	49189476	Rat
2303578	Gluco50	Glucose level QTL 50	2		blood glucose amount (VT:0000188)	blood glucose level (CMO:0000046)	20	26689362	56021148	Rat
6893685	Bw111	Body weight QTL 111	2.7	0.004	body mass (VT:0001259)	body weight (CMO:0000012)	20	1	32578510	Rat
9590252	Scort12	Serum corticosterone level QTL 12	20.46	0.001	blood corticosterone amount (VT:0005345)	plasma corticosterone level (CMO:0001173)	20	1	36600300	Rat
2300188	Bmd68	Bone mineral density QTL 68	6.4	0.0001	femur mineral mass (VT:0010011)	volumetric bone mineral density (CMO:0001553)	20	26689362	56021148	Rat

Markers in Region

RH127435

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	20	29,677,689 - 29,677,906 (+)	MAPPER	mRatBN7.2
Rnor_6.0	20	31,352,420 - 31,352,636	NCBI	Rnor6.0
Rnor_5.0	20	33,152,045 - 33,152,261	UniSTS	Rnor5.0
RGSC_v3.4	20	29,103,592 - 29,103,808	UniSTS	RGSC3.4
Celera	20	31,104,266 - 31,104,482	UniSTS
Cytogenetic Map	20	q11	UniSTS

Expression

RNA-SEQ Expression

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Download All Expressed Objects for this Gene

alimentary part of gastrointestinal system	appendage	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	musculoskeletal system	nervous system	renal system	reproductive system	respiratory system	sensory system	visual system
16	12	67	161	91	90	59	91	59	6	355	191	11	140	81	92	31	17	17

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001139483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256453	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256454	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006256456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008772888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_017601691	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_039098873	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279294	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279295	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279296	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279300	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063279301	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005497285	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AA818254	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC139981	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AW521424	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BF391566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CF114906	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH474016	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAXUCZ010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSRNOT00000082463 ⟹ ENSRNOP00000071310

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	20	30,196,938 - 30,220,957 (+)	Ensembl
mRatBN7.2 Ensembl	20	29,665,045 - 29,678,179 (+)	Ensembl
Rnor_6.0 Ensembl	20	31,339,787 - 31,352,906 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000110362 ⟹ ENSRNOP00000080268

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2 Ensembl	20	29,654,278 - 29,679,236 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000115140 ⟹ ENSRNOP00000096918

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	20	30,197,315 - 30,220,881 (+)	Ensembl
mRatBN7.2 Ensembl	20	29,652,927 - 29,678,100 (+)	Ensembl

Ensembl Acc Id:

ENSRNOT00000118141 ⟹ ENSRNOP00000076399

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8 Ensembl	20	30,193,829 - 30,220,957 (+)	Ensembl
mRatBN7.2 Ensembl	20	29,654,382 - 29,677,767 (+)	Ensembl

RefSeq Acc Id:

NM_001139483 ⟹ NP_001132955

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,207,829 - 30,220,963 (+)	NCBI
mRatBN7.2	20	29,665,045 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,339,787 - 31,352,912 (+)	NCBI
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI
RGSC_v3.4	20	29,089,730 - 29,104,084 (+)	RGD
Celera	20	31,091,780 - 31,104,758 (+)	RGD

Sequence:

show sequence

CAGCCCAGCAGTGCCAAGTTCAAGATGGGCTCCCAGGTCTCGGTGGACACAGGAGCTGTGCACG
TGGTGATCGTGGGCGGGGGCTTTGGAGGGATAGCGGCCGCCAGTCAGCTGCAGGCTCTGAATGT
CCCCTTCATGCTGGTGGACATGAAGGACTCCTTCCACCACAATGTGGCAGCCCTCCGGGCCTCC
GTGGAGAGCGGGTTCGCCAAAAAGACATTCATTTCTTACTCGGTGACCTTCAAGGACAACTTCC
GCCAGGGCAAAGTGATTGGCATAGACTTGAAGAACCGGATGGTGCTGCTAGAGGGTGGTGAGGC
CTTGCCCTTCTCACATCTTATTCTGGCCACAGGCAGTACTGGGCCCTTTCCTGGCAAATTTAAC
GAGGTGTCCTGCCAACAGGCAGCCATCCAGGCCTATGAGGACATGGTGAAGCAGATCCAGCGCT
CGCAGTTCATCGTGGTGGTGGGAGGCGGCTCTGCAGGAGTTGAGATGGCCGCAGAGATTAAAAC
CGAGTACCCTGAGAAGGAGGTCACTCTTATCCACTCCAGAGTACCCCTGGCGGACAAGGAGCTC
CTGCCTTGTGTGCGACAGGAAGTGAAGGAGATCCTCCTCCGAAAGGGTGTGCAGCTGCTGCTGA
GTGAGCGGGTGAGCAACCTGGAGGAACTGCCTCGCAATGAGTATCGGGAGTACATCAAGGTGGA
AACGGACAAGGGCACAGAGGTGGCCACCAACATGGTGATTGTGTGCAATGGGATCAAGATTAAC
AGCTCTGCCTACCGCAGTGCGTTTGAGAGTAGGCTGGCCAGCAACGGGGCTCTGAAAGTGAACG
AGTTCCTCCAGGTGGAAGGTTACAGCAACATTTACGCCATTGGCGACTGTGCTGACATCAAGGA
GCCCAAGATGGCCTATCACGCTGGCCTGCATGCCAACATTGCTGTGGCCAACATTGTCAACTCC
ATGAAGCAGAGGCCCCTCAAAGCCTACAAGCCAGGTGCGCTGACATTCCTCCTGTCCATGGGCA
GAAACGATGGCGTGGGCCAGATCAGTGGCTTCTATGTAGGCCGCCTCATGGTGCGGCTGGCCAA
GAGCAGGGACCTTCTCATCTCCACAAGCTGGAAAACCATGCGGCAATCTCCACCATGACAGGGA
GGCTGCATGGGAGTCGAGGTACCACTCGGAGGGGTGACAGACTGCTTGACAAAGGACACCCTTC
TGACAGGTGCCAATGGCAGAGCTCTTTGTCTGGATCATGGTGTCAGCCATGTGCTGGCTGGAAA
TACAATTTGGGTAAAACCGGAAATGAGAGACAGAGAGTAAAGGGGGGAGGCATTAAAAAAAGAA
AAACTAACCTAGAAGATTCCTTCCAGGTTTGGAAGGTCTGCCTGCAGCTGTGCTAGCTAACGGG
TCTCGGGGAGGCAGAGGGAGGCTGAGGGAGCCTCCCATATCATAGGCTTCCATCTAAGGATGCA
CATGAGTCTGTGTGTGCACATGAGTCTGTGTGTGCACGAGTCTGTGTGCACATGAGTCTGTGTG
TGCACATGAGTCTGTGTGTGCACATGAGTCTGTGTACACGAGTCTGTGTGCACATGAATCTGTG
TGTGTACACATGAGTCTGTGTGTGCACATGAGTCTGTGTGCACATGAATCTGTGTGTGCACATG
AAAGCATTGGGCTTTGGGAGTACTGTTGAGAGCTCTTGTTGGACAGGGCTGGGCAATTCTAGCA
CGGACCTCATCTGTAGTATAGTCAAGAGAGCCCATAGCATGAGACCAAGGGTGCTGGGGTGGGG
AGCTTGTATATCTCACAGTATGCAGGGATTAACTGGGGCCCCGTTTTTATCTTCCTCTCTATGG
TTAGTACCTGCACTTTGCTCTCCCTCCGTCTTCTTTCCTTCCCTCTGAACAACACTCACACAGC
GCGCGAGTGCAACATCTCTCTCCACCCCCACAGTGTCTACCTATATTATTCAGTTTCCCTCAAA
CTCCTGAGCTCGTCATGCTCCTGCCTCAGTCTTTCCTGGTGCCTTGGGACCCTCTTTAACCTTT
GTGAGTCTTTGTGTCCATGTTCGGCTTGACTGTGTGTCACAGGTACATTCATGAAGAGTCAGAC
AAAATCCCTCTCTAGCTCACCCATCTGTTGCTGAAATCTCTTTGGGAAGTGAGGGAGATATAAG
CCACATCTGTCCCTTCTCCTAAGGTCCCAATGACAAACTGAGGCAGGGTTCTGTCAGACTTTAC
TCCAGGGAACCAGTGAGTGTATTGGGCTTCCTTACATATTGTTGGCTTCTCCCATGACAGGCCA
AGCTGGGAAGCTTTAAGCAGCAGGGATGAGAGCCTCACAGATCCGAGGCAGTACAGAGAGCACC
TCTCTCCCTAGCCTTTCCCAGCCTATATGCCCAAGCCTTGAGGCCAGATGCAGTGCCATTAAAG
TGGACTTGTGTGTAAGTGGTAGGGGCCTGCTAGATACACAGATGAAGGTCTCCTGACCCTCCCC
ACGACACCATCATCAGATACAAATAGTCAACAAGGCCAGCTGGGACAATCCTCTTAAAGGGGAG
AGCGGCTGAACTCCCCAGGATGGTGGTCGCTTGGCTCCGAGGACAGTCATGCAAACAGCATCCT
AACAGGGTGAGGTTTATAAGTCTGGAGAGGCTAAGGCTGAACCCTGGTTGGCTTTAGGAATCCC
AGGATAGAGACCTGTGGCTGGGGGAGAGCATTGGCTGCTTGATCTCCAGAGACCAGAGGGGCAA
CTGAGTCCTCGAGTGATTTCCAGGTTACCAGCAGGCTTCTGTGGGGGGTGGGGAGCTATGCTGC
TCATTTTCGGCCAGCTCCTGTCACTTGGGTCCTCATTGGTCACCATGTGTGCTATAGATTGCTA
AGGTGTATGAATTATATGAAGGACTTCCCTATCCAAGTAGGGAATAGCCACTTGTGCATGGCCT
AAGTTGAATGTCTTAGCAGAAGAGACTGAAAGTCCACTCCAGTAGCTTCAGACATGACTCTCCC
CACCCTGCTTCTTTCTGCTTGCTTTTGGCCTTGGCCTCTGGTTATGGGTGGCAAGAGTCCTTGA
GATAGCAGCCTCCGTGGGATTTCCAGTCCATCCCCATTTGGACTGTGACCAAGGTCTGTTCCAC
ACTGGAGTTGAGACTTGACTCTCTCTCCCAGAGACTGACCACTCACCGGCAGCTCTGCCCCTGG
CTCTGCTGTCGTGGGTGCCACCCAGCAAGCTCACCCTTTGTTGGGGCAGGATCAACTGTCTGCA
GGAAGCTGGCCATGTCAGAGCTTCACAGAGCGTGGCAGGACTCTCCAGTGACAGGCTTTGTGTG
ATTTCTTTACAATACTCTGGATGAATCTATCTGCAGGGAACGCAGGTTTCCAAGAGGAGGGGAA
TATCACAATAAAGGGCTATGTTATAAGAAA

hide sequence

RefSeq Acc Id:

XM_006256453 ⟹ XP_006256515

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,284 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,329,047 - 31,352,912 (+)	NCBI
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI

Sequence:

show sequence

CGGAGCTCGGGGCGGAGCTCGGGGCGGGGCTGCGAGCCCGGGACAGTGATGGGCACGCCCCGGC
CTAGGGCCTCGGTGCCCGGAAAACGCGCGGACCGCTACAGAATCTTCTCCCAGCCCAGCAGTGC
CAAGTTCAAGATGGGCTCCCAGGTCTCGGTGGACACAGGAGCTGTGCACGTGGTGATCGTGGGC
GGGGGCTTTGGAGGGATAGCGGCCGCCAGTCAGCTGCAGGCTCTGAATGTCCCCTTCATGCTGG
TGGACATGAAGGACTCCTTCCACCACAATGTGGCAGCCCTCCGGGCCTCCGTGGAGAGCGGGTT
CGCCAAAAAGACATTCATTTCTTACTCGGTGACCTTCAAGGACAACTTCCGCCAGGGCAAAGTG
ATTGGCATAGACTTGAAGAACCGGATGGTGCTGCTAGAGGGTGGTGAGGCCTTGCCCTTCTCAC
ATCTTATTCTGGCCACAGGCAGTACTGGGCCCTTTCCTGGCAAATTTAACGAGGTGTCCTGCCA
ACAGGCAGCCATCCAGGCCTATGAGGACATGGTGAAGCAGATCCAGCGCTCGCAGTTCATCGTG
GTGGTGGGAGGCGGCTCTGCAGGAGTTGAGATGGCCGCAGAGATTAAAACCGAGTACCCTGAGA
AGGAGGTCACTCTTATCCACTCCAGAGTACCCCTGGCGGACAAGGAGCTCCTGCCTTGTGTGCG
ACAGGAAGTGAAGGAGATCCTCCTCCGAAAGGGTGTGCAGCTGCTGCTGAGTGAGCGGGTGAGC
AACCTGGAGGAACTGCCTCGCAATGAGTATCGGGAGTACATCAAGGTGGAAACGGACAAGGGCA
CAGAGGTGGCCACCAACATGGTGATTGTGTGCAATGGGATCAAGATTAACAGCTCTGCCTACCG
CAGTGCGTTTGAGAGTAGGCTGGCCAGCAACGGGGCTCTGAAAGTGAACGAGTTCCTCCAGGTG
GAAGGTTACAGCAACATTTACGCCATTGGCGACTGTGCTGACATCAAGGAGCCCAAGATGGCCT
ATCACGCTGGCCTGCATGCCAACATTGCTGTGGCCAACATTGTCAACTCCATGAAGCAGAGGCC
CCTCAAAGCCTACAAGCCAGGTGCGCTGACATTCCTCCTGTCCATGGGCAGAAACGATGGCGTG
GGCCAGATCAGTGGCTTCTATGTAGGCCGCCTCATGGTGCGGCTGGCCAAGAGCAGGGACCTTC
TCATCTCCACAAGCTGGAAAACCATGCGGCAATCTCCACCATGACAGGGAGGCTGCATGGGAGT
CGAGGTACCACTCGGAGGGGTGACAGACTGCTTGACAAAGGACACCCTTCTGACAGGTGCCAAT
GGCAGAGCTCTTTGTCTGGATCATGGTGTCAGCCATGTGCTGGCTGGAAATACAATTTGGGTAA
AACCGGAAATGAGAGACAGAGAGTAAAGGGGGGAGGCATTAAAAAAAGAAAAACTAACCTAGAA
GATTCCTTCCAGGTTTGGAAGGTCTGCCTGCAGCTGTGCTAGCTAACGGGTCTCGGGGAGGCAG
AGGGAGGCTGAGGGAGCCTCCCATATCATAGGCTTCCATCTAAGGATGCACATGAGTCTGTGTG
TGCACATGAGTCTGTGTGTGCACGAGTCTGTGTGCACATGAGTCTGTGTGTGCACATGAGTCTG
TGTGTGCACATGAGTCTGTGTACACGAGTCTGTGTGCACATGAATCTGTGTGTGTACACATGAG
TCTGTGTGTGCACATGAGTCTGTGTGCACATGAATCTGTGTGTGCACATGAAAGCATTGGGCTT
TGGGAGTACTGTTGAGAGCTCTTGTTGGACAGGGCTGGGCAATTCTAGCACGGACCTCATCTGT
AGTATAGTCAAGAGAGCCCATAGCATGAGACCAAGGGTGCTGGGGTGGGGAGCTTGTATATCTC
ACAGTATGCAGGGATTAACTGGGGCCCCGTTTTTATCTTCCTCTCTATGGTTAGTACCTGCACT
TTGCTCTCCCTCCGTCTTCTTTCCTTCCCTCTGAACAACACTCACACAGCGCGCGAGTGCAACA
TCTCTCTCCACCCCCACAGTGTCTACCTATATTATTCAGTTTCCCTCAAACTCCTGAGCTCGTC
ATGCTCCTGCCTCAGTCTTTCCTGGTGCCTTGGGACCCTCTTTAACCTTTGTGAGTCTTTGTGT
CCATGTTCGGCTTGACTGTGTGTCACAGGTACATTCATGAAGAGTCAGACAAAATCCCTCTCTA
GCTCACCCATCTGTTGCTGAAATCTCTTTGGGAAGTGAGGGAGATATAAGCCACATCTGTCCCT
TCTCCTAAGGTCCCAATGACAAACTGAGGCAGGGTTCTGTCAGACTTTACTCCAGGGAACCAGT
GAGTGTATTGGGCTTCCTTACATATTGTTGGCTTCTCCCATGACAGGCCAAGCTGGGAAGCTTT
AAGCAGCAGGGATGAGAGCCTCACAGATCCGAGGCAGTACAGAGAGCACCTCTCTCCCTAGCCT
TTCCCAGCCTATATGCCCAAGCCTTGAGGCCAGATGCAGTGCCATTAAAGTGGACTTGTGTGTA
AGTGGTAGGGGCCTGCTAGATACACAGATGAAGGTCTCCTGACCCTCCCCACGACACCATCATC
AGATACAAATAGTCAACAAGGCCAGCTGGGACAATCCTCTTAAAGGGGAGAGCGGCTGAACTCC
CCAGGATGGTGGTCGCTTGGCTCCGAGGACAGTCATGCAAACAGCATCCTAACAGGGTGAGGTT
TATAAGTCTGGAGAGGCTAAGGCTGAACCCTGGTTGGCTTTAGGAATCCCAGGATAGAGACCTG
TGGCTGGGGGAGAGCATTGGCTGCTTGATCTCCAGAGACCAGAGGGGCAACTGAGTCCTCGAGT
GATTTCCAGGTTACCAGCAGGCTTCTGTGGGGGGTGGGGAGCTATGCTGCTCATTTTCGGCCAG
CTCCTGTCACTTGGGTCCTCATTGGTCACCATGTGTGCTATAGATTGCTAAGGTGTATGAATTA
TATGAAGGACTTCCCTATCCAAGTAGGGAATAGCCACTTGTGCATGGCCTAAGTTGAATGTCTT
AGCAGAAGAGACTGAAAGTCCACTCCAGTAGCTTCAGACATGACTCTCCCCACCCTGCTTCTTT
CTGCTTGCTTTTGGCCTTGGCCTCTGGTTATGGGTGGCAAGAGTCCTTGAGATAGCAGCCTCCG
TGGGATTTCCAGTCCATCCCCATTTGGACTGTGACCAAGGTCTGTTCCACACTGGAGTTGAGAC
TTGACTCTCTCTCCCAGAGACTGACCACTCACCGGCAGCTCTGCCCCTGGCTCTGCTGTCGTGG
GTGCCACCCAGCAAGCTCACCCTTTGTTGGGGCAGGATCAACTGTCTGCAGGAAGCTGGCCATG
TCAGAGCTTCACAGAGCGTGGCAGGACTCTCCAGTGACAGGCTTTGTGTGATTTCTTTACAATA
CTCTGGATGAATCTATCTGCAGGGAACGCAGGTTTCCAAGAGGAGGGGAATATCACAATAAAGG
GCTATGTTATAAGAAA

hide sequence

RefSeq Acc Id:

XM_006256454 ⟹ XP_006256516

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,122 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,343 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,329,069 - 31,350,831 (+)	NCBI
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI

Sequence:

show sequence

GGCGGGGCTGCGAGCCCGGGACAGTGATGGGCACGCCCCGGCCTAGGGCCTCGGTGCCCGGAAA
ACGCGCGGACCGCTACAGCAGTGCCAAGTTCAAGATGGGCTCCCAGGTCTCGGTGGACACAGGA
GCTGTGCACGTGGTGATCGTGGGCGGGGGCTTTGGAGGGATAGCGGCCGCCAGTCAGCTGCAGG
CTCTGAATGTCCCCTTCATGCTGGTGGACATGAAGGACTCCTTCCACCACAATGTGGCAGCCCT
CCGGGCCTCCGTGGAGAGCGGGTTCGCCAAAAAGACATTCATTTCTTACTCGGTGACCTTCAAG
GACAACTTCCGCCAGGGCAAAGTGATTGGCATAGACTTGAAGAACCGGATGGTGCTGCTAGAGG
GTGGTGAGGCCTTGCCCTTCTCACATCTTATTCTGGCCACAGGCAGTACTGGGCCCTTTCCTGG
CAAATTTAACGAGGTGTCCTGCCAACAGGCAGCCATCCAGGCCTATGAGGACATGGTGAAGCAG
ATCCAGCGCTCGCAGTTCATCGTGGTGGTGGGAGGCGGCTCTGCAGGAGTTGAGATGGCCGCAG
AGATTAAAACCGAGTACCCTGAGAAGGAGGTCACTCTTATCCACTCCAGAGTACCCCTGGCGGA
CAAGGAGCTCCTGCCTTGTGTGCGACAGGAAGTGAAGGAGATCCTCCTCCGAAAGGGTGTGCAG
CTGCTGCTGAGTGAGCGGGTGAGCAACCTGGAGGAACTGCCTCGCAATGAGTATCGGGAGTACA
TCAAGGTGGAAACGGACAAGGGCACAGAGGTGGCCACCAACATGGTGATTGTGTGCAATGGGAT
CAAGATTAACAGCTCTGCCTACCGCAGTGCGTTTGCAGAGAGTAGGCTGGCCAGCAACGGGGCT
CTGAAAGTGAACGAGTTCCTCCAGGTGGAAGGTTACAGCAACATTTACGCCATTGGCGACTGTG
CTGACATCAAGGAGCCCAAGATGGCCTATCACGCTGGCCTGCATGCCAACATTGCTGTGGCCAA
CATTGTCAACTCCATGAAGCAGAGGCCCCTCAAAGCCTACAAGCCAGGTGCGCTGACATTCCTC
CTGTCCATGGGCAGAAACGATGGCGTGGGCCAGATCAGTGGCTTCTATGTAGGCCGCCTCATGG
TGCGGCTGGCCAAGAGCAGGGACCTTCTCATCTCCACAAGCTGGAAAACCATGCGGCAATCTCC
ACCATGACAGGGAGGCTGCATGGGAGTCGAGGTACCACTCGGAGGGGTGACAGACTGCTTGACA
AAGGACACCCTTCTGACAGGTGCCAATGGCAGAGCTCTTTGTCTGGATCATGGTGTCAGCCATG
TGCTGGCTGGAAATACAATTTGGGTAAAACCGGAAATGAGAGACAGAGAGTAAAGGGGGGAGGC
ATTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_006256456 ⟹ XP_006256518

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,087 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,291 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,329,050 - 31,350,831 (+)	NCBI
Rnor_5.0	20	33,126,313 - 33,153,173 (+)	NCBI

Sequence:

show sequence

AGCTCGGGGCGGAGCTCGGGGCGGGGCTGCGAGCCCGGGACAGTGATGGGCACGCCCCGGCCTA
GGGCCTCGGTGCCCGGAAAACGCGCGGACCGCTACAGCCCAGCAGTGCCAAGTTCAAGATGGGC
TCCCAGGTCTCGGTGGACACAGGAGCTGTGCACGTGGTGATCGTGGGCGGGGGCTTTGGAGGGA
TAGCGGCCGCCAGTCAGCTGCAGGCTCTGAATGTCCCCTTCATGCTGGTGGACATGAAGGACTC
CTTCCACCACAATGTGGCAGCCCTCCGGGCCTCCGTGGAGAGCGGGTTCGCCAAAAAGACATTC
ATTTCTTACTCGGTGACCTTCAAGGACAACTTCCGCCAGGGCAAAGTGATTGGCATAGACTTGA
AGAACCGGATGGTGCTGCTAGAGGGTGGTGAGGCCTTGCCCTTCTCACATCTTATTCTGGCCAC
AGGCAGTACTGGGCCCTTTCCTGGCAAATTTAACGAGGTGTCCTGCCAACAGGCAGCCATCCAG
GCCTATGAGGACATGGTGAAGCAGATCCAGCGCTCGCAGTTCATCGTGGTGGTGGGAGGCGGCT
CTGCAGGAGTTGAGATGGCCGCAGAGATTAAAACCGAGTACCCTGAGAAGGAGGTCACTCTTAT
CCACTCCAGAGTACCCCTGGCGGACAAGGAGCTCCTGCCTTGTGTGCGACAGGAAGTGAAGGAG
ATCCTCCTCCGAAAGGGTGTGCAGCTGCTGCTGAGTGAGCGGGTGAGCAACCTGGAGGAACTGC
CTCGCAATGAGTATCGGGAGTACATCAAGGTGGAAACGGACAAGGGCACAGAGGTGGCCACCAA
CATGGTGATTGTGTGCAATGGGATCAAGATTAACAGCTCTGCCTACCGCAGTGCGTTTGCAGAG
AGTAGGCTGGCCAGCAACGGGGCTCTGAAAGTGAACGAGTTCCTCCAGGTGGAAGGTTACAGCA
ACATTTACGCCATTGGCGACTGTGCTGACATCAAGGAGCCCAAGATGGCCTATCACGCTGGCCT
GCATGCCAACATTGCTGTGGCCAACATTGTCAACTCCATGAAGCAGAGGCCCCTCAAAGCCTAC
AAGCCAGGTGCGCTGACATTCCTCCTGTCCATGGGCAGAAACGATGGCGTGGGCCAGATCAGTG
GCTTCTATGTAGGCCGCCTCATGGTGCGGCTGGCCAAGAGCAGGGACCTTCTCATCTCCACAAG
CTGGAAAACCATGCGGCAATCTCCACCATGACAGGGAGGCTGCATGGGAGTCGAGGTACCACTC
GGAGGGGTGACAGACTGCTTGACAAAGGACACCCTTCTGACAGGTGCCAATGGCAGAGCTCTTT
GTCTGGATCATGGTGTCAGCCATGTGCTGGCTGGAAATACAATTTGGGTAAAACCGGAAATGAG
AGACAGAGAGTAAAGGGGGGAGGCATTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_008772888 ⟹ XP_008771110

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,284 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,329,047 - 31,350,831 (+)	NCBI

Sequence:

show sequence

CGGAGCTCGGGGCGGAGCTCGGGGCGGGGCTGCGAGCCCGGGACAGTGATGGGCACGCCCCGGC
CTAGGGCCTCGGTGCCCGGAAAACGCGCGGACCGCTACAGAATCTTCTCCCAGCCCAGCAGTGC
CAAGTTCAAGATGGGCTCCCAGGTCTCGGTGGACACAGGAGCTGTGCACGTGGTGATCGTGGGC
GGGGGCTTTGGAGGGATAGCGGCCGCCAGTCAGCTGCAGGCTCTGAATGTCCCCTTCATGCTGG
TGGACATGAAGGACTCCTTCCACCACAATGTGGCAGCCCTCCGGGCCTCCGTGGAGAGCGGGTT
CGCCAAAAAGACATTCATTTCTTACTCGGTGACCTTCAAGGACAACTTCCGCCAGGGCAAAGTG
ATTGGCATAGACTTGAAGAACCGGATGGTGCTGCTAGAGGGTGGTGAGGCCTTGCCCTTCTCAC
ATCTTATTCTGGCCACAGGCAGTACTGGGCCCTTTCCTGGCAAATTTAACGAGGTGTCCTGCCA
ACAGGCAGCCATCCAGGCCTATGAGGACATGGTGAAGCAGATCCAGCGCTCGCAGTTCATCGTG
GTGGTGGGAGGCGGCTCTGCAGGAGTTGAGATGGCCGCAGAGATTAAAACCGAGTACCCTGAGA
AGGAGGTCACTCTTATCCACTCCAGAGTACCCCTGGCGGACAAGGAGCTCCTGCCTTGTGTGCG
ACAGGAAGTGAAGGAGATCCTCCTCCGAAAGGGTGTGCAGCTGCTGCTGAGTGAGCGGGTGAGC
AACCTGGAGGAACTGCCTCGCAATGAGTATCGGGAGTACATCAAGGTGGAAACGGACAAGGGCA
CAGAGGTGGCCACCAACATGGTGATTGTGTGCAATGGGATCAAGATTAACAGCTCTGCCTACCG
CAGTGCGTTTGCAGAGAGTAGGCTGGCCAGCAACGGGGCTCTGAAAGTGAACGAGTTCCTCCAG
GTGGAAGGTTACAGCAACATTTACGCCATTGGCGACTGTGCTGACATCAAGGAGCCCAAGATGG
CCTATCACGCTGGCCTGCATGCCAACATTGCTGTGGCCAACATTGTCAACTCCATGAAGCAGAG
GCCCCTCAAAGCCTACAAGCCAGGTGCGCTGACATTCCTCCTGTCCATGGGCAGAAACGATGGC
GTGGGCCAGATCAGTGGCTTCTATGTAGGCCGCCTCATGGTGCGGCTGGCCAAGAGCAGGGACC
TTCTCATCTCCACAAGCTGGAAAACCATGCGGCAATCTCCACCATGACAGGGAGGCTGCATGGG
AGTCGAGGTACCACTCGGAGGGGTGACAGACTGCTTGACAAAGGACACCCTTCTGACAGGTGCC
AATGGCAGAGCTCTTTGTCTGGATCATGGTGTCAGCCATGTGCTGGCTGGAAATACAATTTGGG
TAAAACCGGAAATGAGAGACAGAGAGTAAAGGGGGGAGGCATTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_017601691 ⟹ XP_017457180

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,283 - 29,678,182 (+)	NCBI
Rnor_6.0	20	31,329,047 - 31,350,831 (+)	NCBI

Sequence:

show sequence

CGGAGCTCGGGGCGGAGCTCGGGGCGGGGCTGCGAGCCCGGGACAGTGATGGGCACGCCCCGGC
CTAGGGCCTCGGTGCCCGGAAAACGCGCGGACCGCTACAGAATCTTCTCCCAGCCCAGCAGTGC
CAAGTTCAAGATGGGCTCCCAGGTCTCGGTGGACACAGGAGCTGTGCACGTGGTGATCGTGGGC
GGGGGCTTTGGAGGGATAGCGGCCGCCAGTCAGCTGCAGGCTCTGAATGTCCCCTTCATGCTGG
TGGACATGAAGGACTCCTTCCACCACAATGTGGCAGCCCTCCGGGCCTCCGTGGAGAGCGGGTT
CGCCAAAAAGACATTCATTTCTTACTCGGTGACCTTCAAGGACAACTTCCGCCAGGGCAAAGTG
ATTGGCATAGACTTGAAGAACCGGATGGTGCTGCTAGAGGGTGGTGAGATCCAGCGCTCGCAGT
TCATCGTGGTGGTGGGAGGCGGCTCTGCAGGAGTTGAGATGGCCGCAGAGATTAAAACCGAGTA
CCCTGAGAAGGAGGTCACTCTTATCCACTCCAGAGTACCCCTGGCGGACAAGGAGCTCCTGCCT
TGTGTGCGACAGGAAGTGAAGGAGATCCTCCTCCGAAAGGGTGTGCAGCTGCTGCTGAGTGAGC
GGGTGAGCAACCTGGAGGAACTGCCTCGCAATGAGTATCGGGAGTACATCAAGGTGGAAACGGA
CAAGGGCACAGAGGTGGCCACCAACATGGTGATTGTGTGCAATGGGATCAAGATTAACAGCTCT
GCCTACCGCAGTGCGTTTGCAGAGAGTAGGCTGGCCAGCAACGGGGCTCTGAAAGTGAACGAGT
TCCTCCAGGTGGAAGGTTACAGCAACATTTACGCCATTGGCGACTGTGCTGACATCAAGGAGCC
CAAGATGGCCTATCACGCTGGCCTGCATGCCAACATTGCTGTGGCCAACATTGTCAACTCCATG
AAGCAGAGGCCCCTCAAAGCCTACAAGCCAGGTGCGCTGACATTCCTCCTGTCCATGGGCAGAA
ACGATGGCGTGGGCCAGATCAGTGGCTTCTATGTAGGCCGCCTCATGGTGCGGCTGGCCAAGAG
CAGGGACCTTCTCATCTCCACAAGCTGGAAAACCATGCGGCAATCTCCACCATGACAGGGAGGC
TGCATGGGAGTCGAGGTACCACTCGGAGGGGTGACAGACTGCTTGACAAAGGACACCCTTCTGA
CAGGTGCCAATGGCAGAGCTCTTTGTCTGGATCATGGTGTCAGCCATGTGCTGGCTGGAAATAC
AATTTGGGTAAAACCGGAAATGAGAGACAGAGAGTAAAGGGGGGAGGCATTAAAAAAA

hide sequence

RefSeq Acc Id:

XM_039098871 ⟹ XP_038954799

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,125 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,347 - 29,678,182 (+)	NCBI

RefSeq Acc Id:

XM_039098873 ⟹ XP_038954801

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,290 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,513 - 29,678,182 (+)	NCBI

RefSeq Acc Id:

XM_063279294 ⟹ XP_063135364

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,195,781 - 30,222,014 (+)	NCBI

RefSeq Acc Id:

XM_063279295 ⟹ XP_063135365

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,290 - 30,222,014 (+)	NCBI

RefSeq Acc Id:

XM_063279296 ⟹ XP_063135366

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,087 - 30,222,014 (+)	NCBI

RefSeq Acc Id:

XM_063279297 ⟹ XP_063135367

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,222,014 (+)	NCBI

RefSeq Acc Id:

XM_063279299 ⟹ XP_063135369

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,122 - 30,222,014 (+)	NCBI

RefSeq Acc Id:

XM_063279300 ⟹ XP_063135370

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,213,753 (+)	NCBI

RefSeq Acc Id:

XM_063279301 ⟹ XP_063135371

Type:

CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,121 - 30,213,753 (+)	NCBI

RefSeq Acc Id:

XR_005497285

Type:

NON-CODING

Position:

Rat Assembly	Chr	Position (strand)	Source
GRCr8	20	30,197,088 - 30,222,014 (+)	NCBI
mRatBN7.2	20	29,654,284 - 29,679,239 (+)	NCBI

Protein Sequences


Protein RefSeqs	NP_001132955	(Get FASTA)	NCBI Sequence Viewer
	XP_006256515	(Get FASTA)	NCBI Sequence Viewer
	XP_006256516	(Get FASTA)	NCBI Sequence Viewer
	XP_006256518	(Get FASTA)	NCBI Sequence Viewer
	XP_008771110	(Get FASTA)	NCBI Sequence Viewer
	XP_017457180	(Get FASTA)	NCBI Sequence Viewer
	XP_038954799	(Get FASTA)	NCBI Sequence Viewer
	XP_038954801	(Get FASTA)	NCBI Sequence Viewer
	XP_063135364	(Get FASTA)	NCBI Sequence Viewer
	XP_063135365	(Get FASTA)	NCBI Sequence Viewer
	XP_063135366	(Get FASTA)	NCBI Sequence Viewer
	XP_063135367	(Get FASTA)	NCBI Sequence Viewer
	XP_063135369	(Get FASTA)	NCBI Sequence Viewer
	XP_063135370	(Get FASTA)	NCBI Sequence Viewer
	XP_063135371	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	EDL93002	(Get FASTA)	NCBI Sequence Viewer
	EDL93003	(Get FASTA)	NCBI Sequence Viewer
	EDL93004	(Get FASTA)	NCBI Sequence Viewer
	EDL93005	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSRNOP00000071310
	ENSRNOP00000071310.3
	ENSRNOP00000076399
	ENSRNOP00000076399.2
	ENSRNOP00000096918.1

RefSeq Acc Id:

NP_001132955 ⟸ NM_001139483

- UniProtKB:

D4AA14 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALNVPFMLVDMKDSFHHNVAALRASVESGFAKK
TFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGEALPFSHLILATGSTGPFPGKFNEVSCQQAA
IQAYEDMVKQIQRSQFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEV
KEILLRKGVQLLLSERVSNLEELPRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYRSAF
ESRLASNGALKVNEFLQVEGYSNIYAIGDCADIKEPKMAYHAGLHANIAVANIVNSMKQRPLKA
YKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLAKSRDLLISTSWKTMRQSPP

hide sequence

RefSeq Acc Id:	XP_006256515 ⟸ XM_006256453
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I5ZQB7 (UniProtKB/TrEMBL), D4AA14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTPRPRASVPGKRADRYRIFSQPSSAKFKMGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALN VPFMLVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGE ALPFSHLILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGVEMAAEIK TEYPEKEVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQLLLSERVSNLEELPRNEYREYIKV ETDKGTEVATNMVIVCNGIKINSSAYRSAFESRLASNGALKVNEFLQVEGYSNIYAIGDCADIK EPKMAYHAGLHANIAVANIVNSMKQRPLKAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLA KSRDLLISTSWKTMRQSPP hide sequence

RefSeq Acc Id:	XP_006256516 ⟸ XM_006256454
- Peptide Label:	isoform X3
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTPRPRASVPGKRADRYSSAKFKMGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALNVPFMLV DMKDSFHHNVAALRASVESGFAKKTFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGEALPFSH LILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGVEMAAEIKTEYPEK EVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQLLLSERVSNLEELPRNEYREYIKVETDKGT EVATNMVIVCNGIKINSSAYRSAFAESRLASNGALKVNEFLQVEGYSNIYAIGDCADIKEPKMA YHAGLHANIAVANIVNSMKQRPLKAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLAKSRDL LISTSWKTMRQSPP hide sequence

RefSeq Acc Id:	XP_006256518 ⟸ XM_006256456
- Peptide Label:	isoform X5
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALNVPFMLVDMKDSFHHNVAALRASVESGFAKK TFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGEALPFSHLILATGSTGPFPGKFNEVSCQQAA IQAYEDMVKQIQRSQFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEV KEILLRKGVQLLLSERVSNLEELPRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYRSAF AESRLASNGALKVNEFLQVEGYSNIYAIGDCADIKEPKMAYHAGLHANIAVANIVNSMKQRPLK AYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRLAKSRDLLISTSWKTMRQSPP hide sequence

RefSeq Acc Id:	XP_008771110 ⟸ XM_008772888
- Peptide Label:	isoform X1
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTPRPRASVPGKRADRYRIFSQPSSAKFKMGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALN VPFMLVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGE ALPFSHLILATGSTGPFPGKFNEVSCQQAAIQAYEDMVKQIQRSQFIVVVGGGSAGVEMAAEIK TEYPEKEVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQLLLSERVSNLEELPRNEYREYIKV ETDKGTEVATNMVIVCNGIKINSSAYRSAFAESRLASNGALKVNEFLQVEGYSNIYAIGDCADI KEPKMAYHAGLHANIAVANIVNSMKQRPLKAYKPGALTFLLSMGRNDGVGQISGFYVGRLMVRL AKSRDLLISTSWKTMRQSPP hide sequence

RefSeq Acc Id:	XP_017457180 ⟸ XM_017601691
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I5XUU7 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGTPRPRASVPGKRADRYRIFSQPSSAKFKMGSQVSVDTGAVHVVIVGGGFGGIAAASQLQALN VPFMLVDMKDSFHHNVAALRASVESGFAKKTFISYSVTFKDNFRQGKVIGIDLKNRMVLLEGGE IQRSQFIVVVGGGSAGVEMAAEIKTEYPEKEVTLIHSRVPLADKELLPCVRQEVKEILLRKGVQ LLLSERVSNLEELPRNEYREYIKVETDKGTEVATNMVIVCNGIKINSSAYRSAFAESRLASNGA LKVNEFLQVEGYSNIYAIGDCADIKEPKMAYHAGLHANIAVANIVNSMKQRPLKAYKPGALTFL LSMGRNDGVGQISGFYVGRLMVRLAKSRDLLISTSWKTMRQSPP hide sequence

Ensembl Acc Id:

ENSRNOP00000071310 ⟸ ENSRNOT00000082463

RefSeq Acc Id:	XP_038954799 ⟸ XM_039098871
- Peptide Label:	isoform X4
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038954801 ⟸ XM_039098873
- Peptide Label:	isoform X5
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSRNOP00000076399 ⟸ ENSRNOT00000118141

Ensembl Acc Id:

ENSRNOP00000096918 ⟸ ENSRNOT00000115140

Ensembl Acc Id:

ENSRNOP00000080268 ⟸ ENSRNOT00000110362

RefSeq Acc Id:	XP_063135364 ⟸ XM_063279294
- Peptide Label:	isoform X5
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135366 ⟸ XM_063279296
- Peptide Label:	isoform X6
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135367 ⟸ XM_063279297
- Peptide Label:	isoform X8
- UniProtKB:	A0A8I5XUU7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135370 ⟸ XM_063279300
- Peptide Label:	isoform X10
- UniProtKB:	A6K418 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135371 ⟸ XM_063279301
- Peptide Label:	isoform X11
- UniProtKB:	A6K418 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135369 ⟸ XM_063279299
- Peptide Label:	isoform X9
- UniProtKB:	A0A8I5XUU7 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063135365 ⟸ XM_063279295
- Peptide Label:	isoform X6
- UniProtKB:	D4AA14 (UniProtKB/TrEMBL)

Protein Domains

FAD/NAD(P)-binding

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-D4AA14-F1-model_v2	AlphaFold	D4AA14	1-373	view protein structure

Transcriptome

eQTL		View at Phenogen
WGCNA		View at Phenogen
Tissue/Strain Expression		View at Phenogen

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	RGD:1304964	AgrOrtholog
BioCyc Gene	G2FUF-3714	BioCyc
Ensembl Genes	ENSRNOG00000059445	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSRNOT00000082463	ENTREZGENE
	ENSRNOT00000082463.3	UniProtKB/TrEMBL
	ENSRNOT00000115140.2	UniProtKB/TrEMBL
	ENSRNOT00000118141	ENTREZGENE
	ENSRNOT00000118141.2	UniProtKB/TrEMBL
Gene3D-CATH	3.50.50.100	UniProtKB/TrEMBL
InterPro	FAD/NAD-bd_sf	UniProtKB/TrEMBL
	Pyr_nucl-diS_OxRdtase_FAD/NAD	UniProtKB/TrEMBL
NCBI Gene	361843	ENTREZGENE
PANTHER	APOPTOSIS-INDUCING FACTOR 1	UniProtKB/TrEMBL
	FERROPTOSIS SUPPRESSOR PROTEIN 1	UniProtKB/TrEMBL
Pfam	Pyr_redox_2	UniProtKB/TrEMBL
PhenoGen	Aifm2	PhenoGen
PRINTS	FADPNR	UniProtKB/TrEMBL
	PNDRDTASEII	UniProtKB/TrEMBL
RatGTEx	ENSRNOG00000059445	RatGTEx
Superfamily-SCOP	SSF51905	UniProtKB/TrEMBL
UniProt	A0A8I5XUU7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I5ZQB7	ENTREZGENE
	A0A8I6GMA9_RAT	UniProtKB/TrEMBL
	A6K418	ENTREZGENE, UniProtKB/TrEMBL
	D4AA14	ENTREZGENE, UniProtKB/TrEMBL

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2024-08-30	Aifm2	AIF family member 2	Aifm2	apoptosis inducing factor, mitochondria associated 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2015-11-25	Aifm2	apoptosis inducing factor, mitochondria associated 2	Aifm2	apoptosis-inducing factor, mitochondrion-associated 2	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2008-02-26	Aifm2	apoptosis-inducing factor, mitochondrion-associated 2	Amid_predicted	apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death (predicted)	Nomenclature updated to reflect human and mouse nomenclature	1299863	APPROVED
2005-01-12	Amid_predicted	apoptosis-inducing factor (AIF)-like mitochondrion-associated inducer of death (predicted)			Symbol and Name status set to approved	70820	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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