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Gene: Pdxk (pyridoxal kinase) Rattus norvegicus
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Symbol: Pdxk
Name: pyridoxal kinase
RGD ID: 621324
Description: Exhibits pyridoxal binding activity and pyridoxal kinase activity. Involved in several processes, including pyridoxal phosphate biosynthetic process; response to X-ray; and response to progesterone. Predicted to localize to cytosol and nucleoplasm. Orthologous to human PDXK (pyridoxal kinase); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; INTERACTS WITH (+)-pilocarpine; (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: pyridoxal (pyridoxine, vitamin B6) kinase; pyridoxine kinase
Orthologs:
Homo sapiens (human) : PDXK (pyridoxal kinase)  Alliance
Mus musculus (house mouse) : Pdxk (pyridoxal (pyridoxine, vitamin B6) kinase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Pdxk (pyridoxal kinase)
Pan paniscus (bonobo/pygmy chimpanzee) : PDXK (pyridoxal kinase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Pdxk (pyridoxal kinase)
Chlorocebus sabaeus (African green monkey) : PDXK (pyridoxal kinase)
Heterocephalus glaber (naked mole-rat) : Pdxk (pyridoxal kinase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.02010,930,651 - 10,952,194 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2010,930,518 - 10,952,391 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02013,102,429 - 13,123,972 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42010,541,656 - 10,563,199 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12010,541,882 - 10,563,426 (+)NCBI
Celera2011,721,159 - 11,742,702 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Pdxk
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621324
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.