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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:transcription factor mediated signaling pathway
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Accession:PW:0000716 term browser browse the term
Definition:Transcription factors mediated signaling are components of transcription that, by controlling the expression of target genes, impact upon a wide range of processes.


show annotations for term's descendants           Sort by:
aldosterone signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CASP8AP2 caspase 8 associated protein 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:87,707,152...87,754,836
Ensembl chr 6:90,996,127...91,023,757 		JBrowse link
G CREBBP CREB binding protein ISO RGD PMID:21784126 RGD:7421504 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DAXX death domain associated protein ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:32,890,846...32,895,307
Ensembl chr 6:34,004,543...34,008,717 		JBrowse link
G DHX9 DExH-box helicase 9 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 1:158,355,472...158,404,178
Ensembl chr 1:162,006,822...162,055,833 		JBrowse link
G ELL elongation factor for RNA polymerase II ISO RGD PMID:21784126 RGD:7421504 NCBI chr19:17,923,035...17,999,842
Ensembl chr19:18,894,054...18,969,923 		JBrowse link
G FAF1 Fas associated factor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 1:49,679,198...50,207,129
Ensembl chr 1:51,188,540...51,606,904 		JBrowse link
G FKBP4 FKBP prolyl isomerase 4 ISO RGD PMID:21784126 RGD:7421504 NCBI chr12:2,915,017...2,924,423
Ensembl chr12:2,847,496...2,856,107 		JBrowse link
G FKBP5 FKBP prolyl isomerase 5 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:35,135,745...35,250,860
Ensembl chr 6:36,337,883...36,452,664 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872 		JBrowse link
G JAK2 Janus kinase 2 ISO RGD PMID:15932931 RGD:1641841 NCBI chr 9:4,820,303...4,971,867
Ensembl chr 9:5,006,271...5,156,626 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NFYC nuclear transcription factor Y subunit gamma ISO RGD PMID:21784126 RGD:7421504 NCBI chr 1:39,984,716...40,064,464
Ensembl chr 1:41,304,194...41,383,615 		JBrowse link
G NR3C2 nuclear receptor subfamily 3 group C member 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chr 4:140,418,624...140,785,180
Ensembl chr 4:152,108,508...152,430,298 		JBrowse link
G PIAS1 protein inhibitor of activated STAT 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chr15:47,006,718...47,141,035
Ensembl chr15:65,276,530...65,410,105 		JBrowse link
G PPARGC1A PPARG coactivator 1 alpha ISO RGD PMID:21784126 RGD:7421504 NCBI chr 4:18,196,431...18,876,889
Ensembl chr 4:23,483,377...23,581,212 		JBrowse link
G PTGES3 prostaglandin E synthase 3 ISO RGD PMID:21784126 RGD:7421504 NCBI chr12:32,221,908...32,247,228
Ensembl chr12:32,476,835...32,503,181 		JBrowse link
G UBE2I ubiquitin conjugating enzyme E2 I ISO RGD PMID:21784126 RGD:7421504 Ensembl chr16:1,367,288...1,382,575 JBrowse link
altered androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor ISO RGD PMID:18008377 PMID:23759327 RGD:2326139 RGD:8693397 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G VHL von Hippel-Lindau tumor suppressor ISO RGD PMID:22035299 RGD:6907133 NCBI chr 3:10,077,630...10,089,499
Ensembl chr 3:10,430,143...10,440,234 		JBrowse link
altered p53 signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ETS1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:22713868 RGD:8663430 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO RGD PMID:19165225 PMID:23262034 RGD:2316186 RGD:8663434 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278 		JBrowse link
G MDM4 MDM4 regulator of p53 ISO RGD PMID:23262034 RGD:8663434 NCBI chr 1:180,117,364...180,151,144
Ensembl chr 1:184,406,124...184,439,344 		JBrowse link
G MRE11 MRE11 homolog, double strand break repair nuclease ISO RGD PMID:23263379 RGD:8663431 NCBI chr11:89,418,537...89,500,705
Ensembl chr11:92,918,549...92,985,966 		JBrowse link
G NFYA nuclear transcription factor Y subunit alpha ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr 6:40,661,407...40,688,440
Ensembl chr 6:41,969,561...41,996,963 		JBrowse link
G NFYB nuclear transcription factor Y subunit beta ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr12:101,693,559...101,714,057
Ensembl chr12:105,089,028...105,108,825 		JBrowse link
G NFYC nuclear transcription factor Y subunit gamma ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr 1:39,984,716...40,064,464
Ensembl chr 1:41,304,194...41,383,615 		JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:22713868 RGD:8663430 NCBI chr19:9,389,829...9,404,099
Ensembl chr19:10,053,254...10,066,853 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr22:22,725,790...22,799,749
Ensembl chr22:40,811,459...40,884,947 		JBrowse link
G TP53 tumor protein p53 ISO RGD PMID:18772397 PMID:19078924 PMID:19165225 PMID:20951313 PMID:22713868 More... RGD:2316186 RGD:4143515 RGD:5133242 RGD:5490966 RGD:8663430 RGD:8663431 RGD:8693397 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP63 tumor protein p63 ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr 3:186,651,879...186,918,300
Ensembl chr 3:195,199,167...195,474,104 		JBrowse link
G TP73 tumor protein p73 ISO RGD PMID:22713868 PMID:23263379 RGD:8663430 RGD:8663431 NCBI chr 1:2,323,399...2,405,295
Ensembl chr 1:3,476,064...3,529,206 		JBrowse link
G VDR vitamin D receptor ISO RGD PMID:22713868 RGD:8663430 NCBI chr12:40,828,413...40,891,700
Ensembl chr12:41,702,742...41,766,192 		JBrowse link
androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AR androgen receptor ISO RGD PMID:16356826 RGD:2326084 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948 		JBrowse link
G CREBBP CREB binding protein ISO RGD PMID:17163421 RGD:2326123 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DNAJA2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:16356826 RGD:2326084 NCBI chr16:27,223,414...27,240,726
Ensembl chr16:46,113,088...46,130,028 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:17163421 RGD:2326123 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872 		JBrowse link
G HSPA8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:16356826 RGD:2326084 NCBI chr11:117,890,545...117,895,262
Ensembl chr11:121,809,800...121,815,773 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:17163421 RGD:2326123 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G PIAS2 protein inhibitor of activated STAT 2 ISO RGD PMID:9920921 RGD:70792 NCBI chr18:40,067,901...40,196,078
Ensembl chr18:43,622,455...43,728,675 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chr19:46,691,795...46,705,179
Ensembl chr19:55,610,938...55,623,135 		JBrowse link
G ST13 ST13 Hsp70 interacting protein ISO RGD PMID:16356826 RGD:2326084 NCBI chr22:21,719,713...21,751,912
Ensembl chr22:39,815,337...39,848,049 		JBrowse link
G STIP1 stress induced phosphoprotein 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chr11:59,542,760...59,560,758
Ensembl chr11:62,889,052...62,906,902 		JBrowse link
aryl hydrocarbon receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AHR aryl hydrocarbon receptor ISO RGD PMID:10639156 RGD:1300277 NCBI chr 7:17,949,254...17,998,737
Ensembl chr 7:17,278,637...17,326,171 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:1317062 RGD:41410437 NCBI chr 1:126,160,017...126,226,222
Ensembl chr 1:129,809,431...129,875,629 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO RGD PMID:12859947 RGD:631760 NCBI chr15:59,376,993...59,573,925 JBrowse link
bile acid signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB11 ATP binding cassette subfamily B member 11 ISO RGD PMID:27090119 RGD:15090804 NCBI chr2B:56,199,434...56,311,773
Ensembl chr2B:173,664,518...173,776,379 		JBrowse link
G ABCC2 ATP binding cassette subfamily C member 2 ISO RGD PMID:27090119 RGD:15090804 NCBI chr10:96,385,534...96,458,571
Ensembl chr10:99,889,160...99,947,270 		JBrowse link
G ABCC4 ATP binding cassette subfamily C member 4 (PEL blood group) ISO RGD PMID:30223280 RGD:15045612 NCBI chr13:76,193,929...76,476,119
Ensembl chr13:95,349,915...95,582,058 		JBrowse link
G ABCG5 ATP binding cassette subfamily G member 5 ISO RGD PMID:25263431 RGD:15045610 NCBI chr2A:43,896,188...43,922,756
Ensembl chr2A:44,745,183...44,771,012 		JBrowse link
G ABCG8 ATP binding cassette subfamily G member 8 ISO RGD PMID:25263431 RGD:15045610 NCBI chr2A:43,922,787...43,966,678
Ensembl chr2A:44,771,247...44,904,830 		JBrowse link
G ACAT2 acetyl-CoA acetyltransferase 2 ISO RGD PMID:25263431 RGD:15045610 NCBI chr 6:157,644,894...157,661,965
Ensembl chr 6:162,656,497...162,673,606 		JBrowse link
G ALDH1L1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:30223280 RGD:15045612 NCBI chr 3:123,166,630...123,244,257
Ensembl chr 3:130,484,862...130,562,934 		JBrowse link
G CYP27A1 cytochrome P450 family 27 subfamily A member 1 ISO RGD PMID:28774887 RGD:15045601 NCBI chr2B:106,042,235...106,076,840
Ensembl chr2B:224,637,238...224,671,474 		JBrowse link
G CYP7A1 cytochrome P450 family 7 subfamily A member 1 ISO RGD PMID:28774887 PMID:30223280 RGD:15045601 RGD:15045612 NCBI chr 8:54,942,509...54,952,500
Ensembl chr 8:56,593,799...56,604,037 		JBrowse link
G CYP8B1 cytochrome P450 family 8 subfamily B member 1 ISO RGD PMID:25263431 RGD:15045610 NCBI chr 3:42,775,679...42,779,440
Ensembl chr 3:43,824,423...43,842,716 		JBrowse link
G DGAT2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:25263431 RGD:15045610 NCBI chr11:70,824,791...70,857,530
Ensembl chr11:74,126,169...74,158,854 		JBrowse link
G HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:25263431 RGD:15045610 NCBI chr 5:39,936,630...39,961,519
Ensembl chr 5:40,548,919...40,573,785 		JBrowse link
G NR1H3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:25263431 RGD:15045610 NCBI chr11:47,195,122...47,215,277
Ensembl chr11:47,748,353...47,768,672 		JBrowse link
G NR1H4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:25263431 PMID:27090119 PMID:28774887 PMID:29235094 PMID:30061734 More... RGD:15042870 RGD:15042872 RGD:15045601 RGD:15045610 RGD:15045612 RGD:15090804 RGD:15092071 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058 		JBrowse link
G PRKAA1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:27090119 RGD:15090804 NCBI chr 5:69,581,748...69,620,721
Ensembl chr 5:74,627,830...74,666,505 		JBrowse link
G SLC10A1 solute carrier family 10 member 1 ISO RGD PMID:27090119 RGD:15090804 NCBI chr14:50,369,663...50,390,984
Ensembl chr14:69,240,602...69,261,904 		JBrowse link
G SLCO1A2 solute carrier organic anion transporter family member 1A2 ISO RGD PMID:27090119 RGD:15090804 NCBI chr12:64,963,090...65,029,673
Ensembl chr12:67,566,066...67,632,608 		JBrowse link
cortisol signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CREBBP CREB binding protein ISO RGD PMID:11306337 RGD:5147892 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DNAJA2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:16610357 RGD:5144125 NCBI chr16:27,223,414...27,240,726
Ensembl chr16:46,113,088...46,130,028 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:11306337 RGD:5147892 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G FKBP4 FKBP prolyl isomerase 4 ISO RGD PMID:16610357 RGD:5144125 NCBI chr12:2,915,017...2,924,423
Ensembl chr12:2,847,496...2,856,107 		JBrowse link
G FKBP5 FKBP prolyl isomerase 5 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 6:35,135,745...35,250,860
Ensembl chr 6:36,337,883...36,452,664 		JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872 		JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 5:128,463,186...128,517,563
Ensembl chr 5:134,619,076...134,673,658 		JBrowse link
G KAT2B lysine acetyltransferase 2B ISO RGD PMID:11306337 RGD:5147892 NCBI chr 3:19,956,067...20,070,637
Ensembl chr 3:20,286,865...20,400,770 		JBrowse link
G MED1 mediator complex subunit 1 ISO RGD PMID:11306337 RGD:5147892 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118 		JBrowse link
G MED14 mediator complex subunit 14 ISO RGD PMID:11306337 RGD:5147892 NCBI chr  X:33,097,206...33,183,322
Ensembl chr  X:40,798,363...40,886,270 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:11306337 PMID:19818358 RGD:5144138 RGD:5147892 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:11306337 PMID:19818358 RGD:5144138 RGD:5147892 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:11306337 PMID:19818358 RGD:5144138 RGD:5147892 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:20801081 RGD:5147413 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:20801081 RGD:5147413 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G PTGES3 prostaglandin E synthase 3 ISO RGD PMID:16610357 RGD:5144125 NCBI chr12:32,221,908...32,247,228
Ensembl chr12:32,476,835...32,503,181 		JBrowse link
G SMARCA4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 ISO RGD PMID:11306337 RGD:5147892 NCBI chr19:10,515,216...10,616,155
Ensembl chr19:11,250,006...11,334,952 		JBrowse link
G STIP1 stress induced phosphoprotein 1 ISO RGD PMID:16610357 RGD:5144125 NCBI chr11:59,542,760...59,560,758
Ensembl chr11:62,889,052...62,906,902 		JBrowse link
estrogen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ASCC1 activating signal cointegrator 1 complex subunit 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr10:68,646,113...68,740,097
Ensembl chr10:71,082,355...71,207,096 		JBrowse link
G CALCOCO1 calcium binding and coiled-coil domain 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr12:35,027,491...35,044,039
Ensembl chr12:35,814,629...35,831,191 		JBrowse link
G CARM1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr19:10,424,993...10,476,702
Ensembl chr19:11,144,733...11,195,948 		JBrowse link
G CREBBP CREB binding protein ISO RGD PMID:16394250 RGD:5128512 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DDX5 DEAD-box helicase 5 ISO RGD PMID:16394250 RGD:5128512 NCBI chr17:58,594,956...58,603,570
Ensembl chr17:63,689,082...63,696,142 		JBrowse link
G DNAJA2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:18451092 RGD:4892102 NCBI chr16:27,223,414...27,240,726
Ensembl chr16:46,113,088...46,130,028 		JBrowse link
G EP300 E1A binding protein p300 ISO RGD PMID:16394250 RGD:5128512 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G ESR1 estrogen receptor 1 ISO RGD PMID:16651458 PMID:17928626 PMID:19274700 RGD:1580338 RGD:4892064 RGD:5128669 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551 		JBrowse link
G ESR2 estrogen receptor 2 ISO RGD PMID:15564578 PMID:17928626 PMID:19274700 RGD:1582269 RGD:4892064 RGD:5128669 NCBI chr14:44,807,875...44,919,780
Ensembl chr14:63,064,402...63,131,303 		JBrowse link
G FKBP4 FKBP prolyl isomerase 4 ISO RGD PMID:18451092 RGD:4892102 NCBI chr12:2,915,017...2,924,423
Ensembl chr12:2,847,496...2,856,107 		JBrowse link
G GPER1 G protein-coupled estrogen receptor 1 ISO RGD PMID:19274700 PMID:19767412 PMID:20445128 RGD:4892064 RGD:4892084 RGD:5128698 NCBI chr 7:1,331,586...1,338,194 JBrowse link
G HSP90AA1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr14:82,700,881...82,707,020
Ensembl chr14:102,519,699...102,576,723 		JBrowse link
G HSP90AB1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 6:43,842,796...43,849,637
Ensembl chr 6:45,125,773...45,133,872 		JBrowse link
G HSPA4 heat shock protein family A (Hsp70) member 4 ISO RGD PMID:18451092 RGD:4892102 NCBI chr 5:128,463,186...128,517,563
Ensembl chr 5:134,619,076...134,673,658 		JBrowse link
G MED1 mediator complex subunit 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr17:17,836,350...17,883,610
Ensembl chr17:18,050,474...18,095,118 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:16394250 RGD:5128512 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOA6 nuclear receptor coactivator 6 ISO RGD PMID:16394250 RGD:5128512 NCBI chr20:31,044,339...31,154,798
Ensembl chr20:32,170,583...32,247,167 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr21:1,565,149...1,801,358
Ensembl chr21:15,065,197...15,068,673 		JBrowse link
G PHB2 prohibitin 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr12:7,097,073...7,102,474
Ensembl chr12:7,013,195...7,018,053 		JBrowse link
G PPID peptidylprolyl isomerase D ISO RGD PMID:18451092 RGD:4892102 NCBI chr 4:151,029,144...151,043,151
Ensembl chr 4:162,839,247...162,853,245 		JBrowse link
G PRMT1 protein arginine methyltransferase 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr19:46,691,795...46,705,179
Ensembl chr19:55,610,938...55,623,135 		JBrowse link
G PTGES3 prostaglandin E synthase 3 ISO RGD PMID:18451092 RGD:4892102 NCBI chr12:32,221,908...32,247,228
Ensembl chr12:32,476,835...32,503,181 		JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 3:147,759,375...147,781,639
Ensembl chr 3:155,332,751...155,354,139 		JBrowse link
G SRA1 steroid receptor RNA activator 1 ISO RGD PMID:16394250 RGD:5128512 NCBI chr 5:135,914,506...135,922,704
Ensembl chr 5:142,032,119...142,039,188 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:17928626 PMID:20445128 RGD:4892084 RGD:5128669 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G STIP1 stress induced phosphoprotein 1 ISO RGD PMID:18451092 RGD:4892102 NCBI chr11:59,542,760...59,560,758
Ensembl chr11:62,889,052...62,906,902 		JBrowse link
forkhead class A signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCC8 ATP binding cassette subfamily C member 8 ISO PID PID:200087 NCBI chr11:17,447,564...17,531,513
Ensembl chr11:17,133,063...17,216,870 		JBrowse link
G ACADM acyl-CoA dehydrogenase medium chain ISO PID PID:200087 NCBI chr 1:74,939,477...74,978,815
Ensembl chr 1:76,911,763...76,950,840 		JBrowse link
G ACADVL acyl-CoA dehydrogenase very long chain ISO PID PID:200087 NCBI chr17:7,249,717...7,255,165
Ensembl chr17:7,234,283...7,242,417 		JBrowse link
G AFP alpha fetoprotein ISO PID PID:200087 NCBI chr 4:50,739,197...50,758,459
Ensembl chr 4:56,571,519...56,590,391 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO PID PID:200087 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G ALAS1 5'-aminolevulinate synthase 1 ISO PID PID:200087 NCBI chr 3:52,140,423...52,156,656
Ensembl chr 3:53,369,522...53,385,361 		JBrowse link
G ALB albumin ISO PID PID:200087 NCBI chr 4:50,773,244...50,790,474
Ensembl chr 4:56,605,322...56,622,418 		JBrowse link
G ALDOB aldolase, fructose-bisphosphate B ISO PID PID:200087 NCBI chr 9:72,630,064...72,650,918
Ensembl chr 9:100,624,151...100,638,597 		JBrowse link
G AP1B1 adaptor related protein complex 1 subunit beta 1 ISO PID PID:200226 NCBI chr22:10,383,036...10,443,655
Ensembl chr22:28,189,831...28,285,007 		JBrowse link
G APOA1 apolipoprotein A1 ISO PID PID:200087 NCBI chr11:111,673,539...111,675,428
Ensembl chr11:115,606,136...115,608,122 		JBrowse link
G APOB apolipoprotein B ISO PID PID:200226 NCBI chr2A:20,986,464...21,029,004
Ensembl chr2A:21,100,356...21,145,129 		JBrowse link
G AR androgen receptor ISO PID PID:200226 NCBI chr  X:56,722,828...56,909,004
Ensembl chr  X:66,791,081...66,969,357 		JBrowse link
G ATP5PF ATP synthase peripheral stalk subunit F6 ISO PID PID:200226 NCBI chr21:12,169,567...12,180,717
Ensembl chr21:25,519,441...25,537,363 		JBrowse link
G BDH1 3-hydroxybutyrate dehydrogenase 1 ISO PID PID:200087 NCBI chr 3:194,917,904...194,979,451
Ensembl chr 3:204,797,757...204,863,889 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO PID PID:200226 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G C4BPB complement component 4 binding protein beta ISO PID PID:200226 NCBI chr 1:182,691,574...182,703,004
Ensembl chr 1:186,970,253...186,981,024 		JBrowse link
G CDKN1B cyclin dependent kinase inhibitor 1B ISO PID PID:200226 NCBI chr12:12,742,258...12,747,404
Ensembl chr12:13,120,306...13,125,541 		JBrowse link
G CEBPA CCAAT enhancer binding protein alpha ISO PID PID:200087 NCBI chr19:30,223,567...30,226,204 JBrowse link
G CEBPB CCAAT enhancer binding protein beta ISO PID PID:200087 PID:200226 NCBI chr20:46,533,163...46,535,282 JBrowse link
G CEBPD CCAAT enhancer binding protein delta ISO PID PID:200087 NCBI chr 8:44,167,256...44,168,545 JBrowse link
G COL18A1 collagen type XVIII alpha 1 chain ISO PID PID:200226 NCBI chr21:31,720,358...31,834,470 JBrowse link
G CPT1A carnitine palmitoyltransferase 1A ISO PID PID:200087 NCBI chr11:63,841,028...63,928,242
Ensembl chr11:67,144,736...67,205,481 		JBrowse link
G CPT1B carnitine palmitoyltransferase 1B ISO PID PID:200087 NCBI chr22:30,815,073...30,825,341
Ensembl chr22:49,926,893...49,935,420 		JBrowse link
G CPT1C carnitine palmitoyltransferase 1C ISO PID PID:200087 NCBI chr19:46,705,711...46,727,996
Ensembl chr19:55,626,831...55,647,394 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO PID PID:200087 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G CREBBP CREB binding protein ISO PID PID:200226 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G DLK1 delta like non-canonical Notch ligand 1 ISO PID PID:200087 NCBI chr14:81,348,380...81,356,607
Ensembl chr14:100,654,965...100,668,019 		JBrowse link
G DSCAM DS cell adhesion molecule ISO PID PID:200226 NCBI chr21:26,366,295...27,192,617
Ensembl chr21:39,699,077...40,524,164 		JBrowse link
G EP300 E1A binding protein p300 ISO PID PID:200226 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G ESR1 estrogen receptor 1 ISO PID PID:200226 NCBI chr 6:149,507,599...149,918,523
Ensembl chr 6:154,317,002...154,631,551 		JBrowse link
G F2 coagulation factor II, thrombin ISO PID PID:200087 NCBI chr11:46,669,925...46,690,391
Ensembl chr11:47,227,891...47,249,157 		JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200226 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G FOXA1 forkhead box A1 ISO PID PID:200087 PID:200226 NCBI chr14:18,347,284...18,352,705 JBrowse link
G FOXA2 forkhead box A2 ISO PID PID:200087 PID:200226 NCBI chr20:22,519,942...22,524,262 JBrowse link
G FOXA3 forkhead box A3 ISO PID PID:200087 PID:200226 NCBI chr19:42,873,933...42,883,479
Ensembl chr19:51,410,473...51,418,744 		JBrowse link
G FOXF1 forkhead box F1 ISO PID PID:200087 NCBI chr16:67,183,416...67,188,211
Ensembl chr16:86,516,119...86,519,949 		JBrowse link
G G6PC1 glucose-6-phosphatase catalytic subunit 1 ISO PID PID:200087 NCBI chr17:14,407,355...14,419,660
Ensembl chr17:14,635,667...14,646,674 		JBrowse link
G GCG glucagon ISO PID PID:200226 NCBI chr2B:49,436,379...49,446,559
Ensembl chr2B:166,806,016...166,811,155 		JBrowse link
G GCK glucokinase ISO PID PID:200087 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751 		JBrowse link
G HADH hydroxyacyl-CoA dehydrogenase ISO PID PID:200087 NCBI chr 4:100,495,205...100,540,589
Ensembl chr 4:111,067,336...111,113,868 		JBrowse link
G HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ISO PID PID:200087 NCBI chr 5:67,067,001...67,091,786
Ensembl chr 5:72,116,228...72,141,050 		JBrowse link
G HNF1A HNF1 homeobox A ISO PID PID:200087 NCBI chr12:118,562,308...118,584,596
Ensembl chr12:121,932,671...121,955,911 		JBrowse link
G HNF1B HNF1 homeobox B ISO PID PID:200087 NCBI chr17:19,333,485...19,392,147
Ensembl chr17:19,633,424...19,691,863 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO PID PID:200087 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G IGFBP1 insulin like growth factor binding protein 1 ISO PID PID:200087 NCBI chr 7:46,538,566...46,545,536
Ensembl chr 7:46,658,097...46,662,584 		JBrowse link
G INS insulin ISO PID PID:200087 PID:200226 NCBI chr11:2,200,785...2,202,579
Ensembl chr11:2,218,117...2,231,666 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200226 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G KCNJ11 potassium inwardly rectifying channel subfamily J member 11 ISO PID PID:200087 NCBI chr11:17,440,522...17,444,075
Ensembl chr11:17,127,557...17,128,729 		JBrowse link
G KLK3 kallikrein related peptidase 3 ISO PID PID:200226 NCBI chr19:47,820,320...47,827,868
Ensembl chr19:56,712,305...56,718,123 		JBrowse link
G LOC103783265 pulmonary surfactant-associated protein A1 ISO PID PID:200226 NCBI chr10:76,571,312...76,575,820 JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO PID PID:200226 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NDUFV3 NADH:ubiquinone oxidoreductase subunit V3 ISO PID PID:200226 NCBI chr21:29,205,714...29,222,057
Ensembl chr21:42,516,295...42,531,750 		JBrowse link
G NF1 neurofibromin 1 ISO PID PID:200087 NCBI chr17:25,425,081...25,703,689
Ensembl chr17:26,160,855...26,439,295 		JBrowse link
G NFIA nuclear factor I A ISO PID PID:200226 NCBI chr 1:60,331,945...60,713,729
Ensembl chr 1:61,938,945...62,526,753 		JBrowse link
G NFIB nuclear factor I B ISO PID PID:200226 NCBI chr 9:13,923,516...14,376,264 JBrowse link
G NFIC nuclear factor I C ISO PID PID:200226 NCBI chr19:2,387,226...2,495,475
Ensembl chr19:3,294,319...3,440,417 		JBrowse link
G NKX2-1 NK2 homeobox 1 ISO PID PID:200087
G NKX3-1 NK3 homeobox 1 ISO PID PID:200226 NCBI chr 8:22,926,145...22,930,396
Ensembl chr 8:19,863,275...19,864,942 		JBrowse link
G NR2F2 nuclear receptor subfamily 2 group F member 2 ISO PID PID:200226 NCBI chr15:75,008,879...75,021,981 JBrowse link
G NR3C1 nuclear receptor subfamily 3 group C member 1 ISO PID PID:200087 NCBI chr 5:138,634,278...139,089,171
Ensembl chr 5:144,741,452...144,865,269 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO PID PID:200226 NCBI chr21:1,565,149...1,801,358
Ensembl chr21:15,065,197...15,068,673 		JBrowse link
G PCK1 phosphoenolpyruvate carboxykinase 1 ISO PID PID:200087 NCBI chr20:53,901,738...53,907,090
Ensembl chr20:55,179,429...55,184,920 		JBrowse link
G PDX1 pancreatic and duodenal homeobox 1 ISO PID PID:200087 NCBI chr13:9,199,572...9,206,202 JBrowse link
G PISD phosphatidylserine decarboxylase ISO PID PID:200226 NCBI chr22:12,638,418...12,682,733
Ensembl chr22:30,495,546...30,539,389 		JBrowse link
G PKLR pyruvate kinase L/R ISO PID PID:200087 NCBI chr 1:130,634,111...130,646,644
Ensembl chr 1:134,239,565...134,251,351 		JBrowse link
G POU2F1 POU class 2 homeobox 1 ISO PID PID:200226 NCBI chr 1:142,653,296...142,860,572
Ensembl chr 1:146,439,581...146,633,921 		JBrowse link
G PRDM15 PR/SET domain 15 ISO PID PID:200226 NCBI chr21:28,122,173...28,202,837
Ensembl chr21:41,447,858...41,526,888 		JBrowse link
G SCGB1A1 secretoglobin family 1A member 1 ISO PID PID:200226 NCBI chr11:57,774,560...57,780,334
Ensembl chr11:61,133,649...61,137,873 		JBrowse link
G SERPINA1 serpin family A member 1 ISO PID PID:200226 NCBI chr14:75,001,714...75,014,214
Ensembl chr14:94,334,258...94,345,419 		JBrowse link
G SFTPD surfactant protein D ISO PID PID:200226 NCBI chr10:76,275,147...76,318,952
Ensembl chr10:78,965,252...78,974,181 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO PID PID:200226 NCBI chr 7:147,400,112...147,414,036
Ensembl chr 7:159,114,666...159,126,651 		JBrowse link
G SLC2A2 solute carrier family 2 member 2 ISO PID PID:200087 NCBI chr 3:168,002,609...168,033,237
Ensembl chr 3:176,188,184...176,218,722 		JBrowse link
G SOD1 superoxide dismutase 1 ISO PID PID:200226 NCBI chr21:18,029,831...18,037,526 JBrowse link
G SP1 Sp1 transcription factor ISO PID PID:200087 PID:200226 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G TAT tyrosine aminotransferase ISO PID PID:200087 NCBI chr16:53,434,028...53,443,624
Ensembl chr16:71,404,399...71,413,886 		JBrowse link
G TFF1 trefoil factor 1 ISO PID PID:200226 NCBI chr21:28,669,323...28,673,556
Ensembl chr21:41,988,039...41,992,270 		JBrowse link
G TFRC transferrin receptor ISO PID PID:200087 NCBI chr 3:193,384,817...193,417,532
Ensembl chr 3:203,333,953...203,373,998 		JBrowse link
G TTR transthyretin ISO PID PID:200087 NCBI chr18:24,809,707...24,816,713
Ensembl chr18:28,407,893...28,414,960 		JBrowse link
G UCP2 uncoupling protein 2 ISO PID PID:200087 NCBI chr11:69,047,397...69,056,056
Ensembl chr11:72,354,529...72,363,185 		JBrowse link
G VTN vitronectin ISO PID PID:200226 NCBI chr17:28,403,813...28,407,202
Ensembl chr17:28,906,508...28,909,583 		JBrowse link
G XBP1 X-box binding protein 1 ISO PID PID:200226 NCBI chr22:9,863,479...9,869,491
Ensembl chr22:27,567,041...27,571,943 		JBrowse link
hypoxia inducible factor pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABCB1 ATP binding cassette subfamily B member 1 ISO PID PID:200202 NCBI chr 7:79,497,536...79,706,277
Ensembl chr 7:93,147,950...93,243,238 		JBrowse link
G ABCG2 ATP binding cassette subfamily G member 2 (JR blood group) ISO PID PID:200036 PID:200202 NCBI chr 4:80,379,108...80,446,641
Ensembl chr 4:91,101,321...91,170,157 		JBrowse link
G ADM adrenomedullin ISO PID PID:200202 NCBI chr11:10,437,712...10,440,053
Ensembl chr11:10,165,418...10,167,842 		JBrowse link
G ADORA2A adenosine A2a receptor ISO PID PID:200036 NCBI chr22:5,233,876...5,248,622
Ensembl chr22:22,104,253...22,114,189 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO PID PID:200202 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 ISO PID PID:200036 NCBI chr14:1,329,745...1,332,315
Ensembl chr14:19,381,911...19,384,542 		JBrowse link
G ARNT aryl hydrocarbon receptor nuclear translocator ISO PID
RGD		 PMID:22169972 PID:200036 PID:200202 RGD:6483352 NCBI chr 1:126,160,017...126,226,222
Ensembl chr 1:129,809,431...129,875,629 		JBrowse link
G ARNT2 aryl hydrocarbon receptor nuclear translocator 2 ISO RGD PMID:22169972 RGD:6483352 NCBI chr15:59,376,993...59,573,925 JBrowse link
G BHLHE40 basic helix-loop-helix family member e40 ISO PID PID:200036 PID:200202 NCBI chr 3:4,927,487...4,933,215
Ensembl chr 3:5,028,515...5,032,470 		JBrowse link
G BHLHE41 basic helix-loop-helix family member e41 ISO PID PID:200202 NCBI chr12:60,194,758...60,199,344 JBrowse link
G BNIP3 BCL2 interacting protein 3 ISO PID PID:200202 NCBI chr10:128,671,663...128,685,952
Ensembl chr10:132,858,211...132,871,634 		JBrowse link
G CA9 carbonic anhydrase 9 ISO PID PID:200202 NCBI chr 9:35,525,877...35,533,159
Ensembl chr 9:36,328,303...36,335,340 		JBrowse link
G CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ISO PID PID:200036 PID:200202 NCBI chr 6:137,134,142...137,136,550 JBrowse link
G COPS5 COP9 signalosome subunit 5 ISO PID PID:200202 NCBI chr 8:63,586,062...63,605,213
Ensembl chr 8:65,247,950...65,266,511 		JBrowse link
G CP ceruloplasmin ISO PID PID:200202 NCBI chr 3:146,180,527...146,239,833
Ensembl chr 3:153,764,830...153,817,544 		JBrowse link
G CREB1 cAMP responsive element binding protein 1 ISO PID PID:200202 NCBI chr2B:94,762,796...94,836,304
Ensembl chr2B:212,891,261...212,958,130 		JBrowse link
G CREBBP CREB binding protein ISO PID
RGD		 PMID:19364912 PMID:20396958 PID:200036 PID:200202 RGD:6483358 RGD:6483503 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G CUL2 cullin 2 ISO RGD PMID:19364912 RGD:6483358 NCBI chr10:35,127,771...35,210,108
Ensembl chr10:35,704,964...35,787,014 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO PID PID:200202 NCBI chr10:41,296,975...41,384,864
Ensembl chr10:44,552,480...44,564,231 		JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 ISO PID PID:200202 NCBI chr2B:23,744,271...23,748,106
Ensembl chr2B:140,181,829...140,189,647 		JBrowse link
G EDN1 endothelin 1 ISO PID PID:200202 NCBI chr 6:12,076,312...12,142,861
Ensembl chr 6:12,462,718...12,503,545 		JBrowse link
G EFNA1 ephrin A1 ISO PID PID:200036 NCBI chr 1:130,475,128...130,482,531
Ensembl chr 1:134,083,855...134,091,228 		JBrowse link
G EGLN1 egl-9 family hypoxia inducible factor 1 ISO PID
RGD		 PMID:12876291 PMID:14597660 PMID:19364912 PMID:20396958 PID:200036 PID:200202 RGD:1334466 RGD:6483358 RGD:6483503 RGD:727754 NCBI chr 1:206,915,541...206,976,656 JBrowse link
G EGLN2 egl-9 family hypoxia inducible factor 2 ISO PID
RGD		 PMID:14597660 PMID:20396958 PID:200036 RGD:1334466 RGD:6483503 NCBI chr19:37,842,460...37,851,465
Ensembl chr19:46,349,131...46,357,875 		JBrowse link
G EGLN3 egl-9 family hypoxia inducible factor 3 ISO PID
RGD		 PMID:14597660 PMID:20396958 PID:200036 PID:200202 RGD:1334466 RGD:6483503 NCBI chr14:14,689,398...14,716,301
Ensembl chr14:32,880,324...32,907,241 		JBrowse link
G EIF3E eukaryotic translation initiation factor 3 subunit E ISO PID PID:200036 NCBI chr 8:104,848,222...104,895,349 JBrowse link
G ELK1 ETS transcription factor ELK1 ISO PID PID:200036 NCBI chr  X:40,071,433...40,086,518
Ensembl chr  X:47,967,492...47,982,579 		JBrowse link
G ELOB elongin B ISO PID
RGD		 PMID:19364912 PID:200036 RGD:6483358 NCBI chr16:1,631,179...1,637,114 JBrowse link
G ELOC elongin C ISO PID
RGD		 PMID:19364912 PID:200036 RGD:6483358 NCBI chr 8:70,479,805...70,506,142
Ensembl chr 8:72,121,035...72,151,085 		JBrowse link
G ENG endoglin ISO PID PID:200202 NCBI chr 9:98,934,080...98,973,862
Ensembl chr 9:127,605,608...127,644,641 		JBrowse link
G ENO1 enolase 1 ISO PID PID:200202 NCBI chr 1:7,619,490...7,637,558
Ensembl chr 1:8,855,074...8,873,215 		JBrowse link
G EP300 E1A binding protein p300 ISO PID
RGD		 PMID:19364912 PMID:20396958 PID:200036 PID:200202 RGD:6483358 RGD:6483503 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G EPAS1 endothelial PAS domain protein 1 ISO PID
RGD		 PMID:20396958 PMID:22169972 PID:200036 RGD:6483352 RGD:6483503 NCBI chr2A:46,403,411...46,492,734
Ensembl chr2A:47,332,308...47,421,560 		JBrowse link
G EPO erythropoietin ISO PID PID:200036 PID:200202 NCBI chr 7:92,747,671...92,750,886
Ensembl chr 7:106,148,062...106,150,974 		JBrowse link
G ETS1 ETS proto-oncogene 1, transcription factor ISO PID PID:200036 PID:200202 NCBI chr11:123,272,111...123,400,413
Ensembl chr11:127,174,721...127,288,673 		JBrowse link
G FECH ferrochelatase ISO PID PID:200202 NCBI chr18:50,934,520...50,977,132
Ensembl chr18:54,273,527...54,312,378 		JBrowse link
G FLT1 fms related receptor tyrosine kinase 1 ISO PID PID:200036 NCBI chr13:9,584,850...9,779,542 JBrowse link
G FOS Fos proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200202 NCBI chr14:55,832,570...55,835,984
Ensembl chr14:74,676,316...74,679,766 		JBrowse link
G FURIN furin, paired basic amino acid cleaving enzyme ISO PID PID:200202 NCBI chr15:69,560,774...69,576,007
Ensembl chr15:88,763,269...88,774,023 		JBrowse link
G FXN frataxin ISO PID PID:200036 NCBI chr 9:55,690,483...55,754,755
Ensembl chr 9:67,800,579...67,866,031 		JBrowse link
G GATA2 GATA binding protein 2 ISO PID PID:200202 NCBI chr 3:125,526,537...125,535,649
Ensembl chr 3:132,890,508...132,899,035 		JBrowse link
G GCK glucokinase ISO PID PID:200202 NCBI chr 7:44,857,604...44,903,683
Ensembl chr 7:44,926,848...44,937,751 		JBrowse link
G HDAC7 histone deacetylase 7 ISO PID PID:200202 NCBI chr12:40,913,301...40,950,542
Ensembl chr12:41,789,367...41,825,123 		JBrowse link
G HIF1A hypoxia inducible factor 1 subunit alpha ISO PID
RGD		 PMID:12388599 PMID:14597660 PMID:15063765 PMID:18614764 PMID:20396958 More... PID:200202 RGD:1334466 RGD:1580561 RGD:2301848 RGD:628389 RGD:6483352 RGD:6483503 NCBI chr14:42,295,691...42,348,478
Ensembl chr14:60,552,374...60,604,885 		JBrowse link
G HIF1AN hypoxia inducible factor 1 subunit alpha inhibitor ISO PID
RGD		 PMID:14597660 PMID:19364912 PMID:22169972 PID:200036 RGD:1334466 RGD:6483352 RGD:6483358 NCBI chr10:97,135,751...97,148,378
Ensembl chr10:100,616,208...100,628,470 		JBrowse link
G HIF3A hypoxia inducible factor 3 subunit alpha ISO RGD PMID:11237857 PMID:22169972 RGD:6483352 RGD:68201 NCBI chr19:43,243,290...43,326,146
Ensembl chr19:51,815,809...51,862,039 		JBrowse link
G HK1 hexokinase 1 ISO PID PID:200202 NCBI chr10:65,786,940...65,870,204
Ensembl chr10:68,289,288...68,401,045 		JBrowse link
G HK2 hexokinase 2 ISO PID PID:200202 NCBI chr2A:74,897,914...74,957,234
Ensembl chr2A:76,400,240...76,460,874 		JBrowse link
G HMOX1 heme oxygenase 1 ISO PID PID:200202 NCBI chr22:16,388,368...16,401,289
Ensembl chr22:34,230,825...34,244,063 		JBrowse link
G HNF4A hepatocyte nuclear factor 4 alpha ISO PID PID:200202 NCBI chr20:40,684,450...40,763,824
Ensembl chr20:41,779,034...41,856,536 		JBrowse link
G ID2 inhibitor of DNA binding 2 ISO PID PID:200202 NCBI chr2A:8,681,592...8,684,014
Ensembl chr2A:8,847,776...8,850,720 		JBrowse link
G IGFBP1 insulin like growth factor binding protein 1 ISO PID PID:200202 NCBI chr 7:46,538,566...46,545,536
Ensembl chr 7:46,658,097...46,662,584 		JBrowse link
G ITGB2 integrin subunit beta 2 ISO PID PID:200202 NCBI chr21:31,181,228...31,216,033
Ensembl chr21:44,470,999...44,505,963 		JBrowse link
G JUN Jun proto-oncogene, AP-1 transcription factor subunit ISO PID PID:200202 NCBI chr 1:58,042,794...58,045,536 JBrowse link
G KDR kinase insert domain receptor ISO PID PID:200036 NCBI chr 4:68,813,894...68,861,018
Ensembl chr 4:75,377,375...75,427,109 		JBrowse link
G LDHA lactate dehydrogenase A ISO PID PID:200202 NCBI chr11:18,432,347...18,445,694
Ensembl chr11:18,115,250...18,128,400 		JBrowse link
G LEP leptin ISO PID PID:200202 NCBI chr 7:120,230,896...120,248,602
Ensembl chr 7:132,885,011...132,901,519 		JBrowse link
G LOC100995352 keratin-associated protein 10-2 ISO PID PID:200202
G MCL1 MCL1 apoptosis regulator, BCL2 family member ISO PID PID:200202 NCBI chr 1:125,918,760...125,923,952
Ensembl chr 1:129,566,827...129,572,086 		JBrowse link
G MMP14 matrix metallopeptidase 14 ISO PID PID:200036 NCBI chr14:3,654,125...3,665,158
Ensembl chr14:21,753,305...21,764,058 		JBrowse link
G NCOA1 nuclear receptor coactivator 1 ISO PID PID:200202 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO PID PID:200202 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NDRG1 N-myc downstream regulated 1 ISO PID PID:200202 NCBI chr 8:129,891,918...129,952,489
Ensembl chr 8:132,866,245...132,926,514 		JBrowse link
G NOS2 nitric oxide synthase 2 ISO PID PID:200202 NCBI chr17:28,984,295...29,021,516
Ensembl chr17:29,471,510...29,617,093 		JBrowse link
G NPM1 nucleophosmin 1 ISO PID PID:200202 NCBI chr 5:166,735,904...166,756,321
Ensembl chr 5:173,490,197...173,510,656 		JBrowse link
G NT5E 5'-nucleotidase ecto ISO PID PID:200202 NCBI chr 6:83,333,428...83,379,585
Ensembl chr 6:86,615,409...86,661,601 		JBrowse link
G OS9 OS9 endoplasmic reticulum lectin ISO RGD PMID:19364912 RGD:6483358 NCBI chr12:31,205,239...31,232,769
Ensembl chr12:31,463,716...31,493,076 		JBrowse link
G PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 ISO PID PID:200202 NCBI chr10:6,185,415...6,294,641
Ensembl chr10:6,167,841...6,275,940 		JBrowse link
G PFKL phosphofructokinase, liver type ISO PID PID:200202 NCBI chr21:30,557,576...30,584,231
Ensembl chr21:43,857,052...43,878,380 		JBrowse link
G PGK1 phosphoglycerate kinase 1 ISO PID PID:200036 PID:200202 NCBI chr  X:67,280,269...67,302,307
Ensembl chr  X:77,391,805...77,414,459 		JBrowse link
G PGM1 phosphoglucomutase 1 ISO PID PID:200202 NCBI chr 1:62,849,451...62,916,359
Ensembl chr 1:64,658,599...64,725,496 		JBrowse link
G PKM pyruvate kinase M1/2 ISO PID PID:200202 NCBI chr15:51,149,584...51,182,193
Ensembl chr15:69,913,455...69,945,832 		JBrowse link
G PLIN2 perilipin 2 ISO PID PID:200202 NCBI chr 9:18,928,455...18,951,132
Ensembl chr 9:19,421,928...19,462,222 		JBrowse link
G POU5F1 POU class 5 homeobox 1 ISO PID PID:200036 NCBI chr 6:30,910,421...30,916,465
Ensembl chr 6:31,775,343...31,781,426 		JBrowse link
G RACK1 receptor for activated C kinase 1 ISO RGD PMID:19364912 RGD:6483358 NCBI chr 5:176,462,991...176,470,153
Ensembl chr 5:183,712,665...183,720,128 		JBrowse link
G RBX1 ring-box 1 ISO RGD PMID:19364912 RGD:6483358 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175 		JBrowse link
G SAT1 spermidine/spermine N1-acetyltransferase 1 ISO RGD PMID:19364912 RGD:6483358 NCBI chr  X:16,382,735...16,385,790
Ensembl chr  X:23,756,691...23,760,349 		JBrowse link
G SAT2 spermidine/spermine N1-acetyltransferase family member 2 ISO RGD PMID:19364912 RGD:6483358 NCBI chr17:7,657,166...7,658,773
Ensembl chr17:7,643,490...7,645,127 		JBrowse link
G SERPINE1 serpin family E member 1 ISO PID PID:200036 PID:200202 NCBI chr 7:93,267,517...93,279,728
Ensembl chr 7:106,510,130...106,518,450 		JBrowse link
G SIRT1 sirtuin 1 ISO PID PID:200036 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SLC11A2 solute carrier family 11 member 2 ISO PID PID:200036 NCBI chr12:37,726,158...37,774,554
Ensembl chr12:38,629,686...38,677,377 		JBrowse link
G SLC2A1 solute carrier family 2 member 1 ISO PID PID:200036 PID:200202 NCBI chr 1:42,224,273...42,257,184
Ensembl chr 1:43,600,733...43,634,143 		JBrowse link
G SMAD3 SMAD family member 3 ISO PID PID:200202 NCBI chr15:46,013,764...46,143,126
Ensembl chr15:64,284,949...64,414,185 		JBrowse link
G SMAD4 SMAD family member 4 ISO PID PID:200202 NCBI chr18:44,402,112...44,456,779
Ensembl chr18:47,764,568...47,797,359 		JBrowse link
G SP1 Sp1 transcription factor ISO PID PID:200036 PID:200202 NCBI chr12:35,338,492...35,374,462
Ensembl chr12:36,127,681...36,158,356 		JBrowse link
G TERT telomerase reverse transcriptase ISO PID PID:200202 Ensembl chr 5:1,300,960...1,338,872 JBrowse link
G TF transferrin ISO PID PID:200202 NCBI chr 3:130,799,063...130,830,227
Ensembl chr 3:138,274,159...138,305,476 		JBrowse link
G TFF3 trefoil factor 3 ISO PID PID:200202 NCBI chr21:28,627,191...28,631,341
Ensembl chr21:41,948,696...41,952,268 		JBrowse link
G TFRC transferrin receptor ISO PID PID:200202 NCBI chr 3:193,384,817...193,417,532
Ensembl chr 3:203,333,953...203,373,998 		JBrowse link
G TWIST1 twist family bHLH transcription factor 1 ISO PID PID:200036 NCBI chr 7:19,761,041...19,765,665 JBrowse link
G VEGFA vascular endothelial growth factor A ISO PID PID:200036 PID:200202 NCBI chr 6:43,361,053...43,377,366
Ensembl chr 6:44,650,365...44,666,353 		JBrowse link
G VHL von Hippel-Lindau tumor suppressor ISO PID
RGD		 PMID:15063765 PMID:15611513 PMID:19364912 PID:200036 RGD:1358257 RGD:1580561 RGD:6483358 NCBI chr 3:10,077,630...10,089,499
Ensembl chr 3:10,430,143...10,440,234 		JBrowse link
nuclear factor kappa B signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ARRB2 arrestin beta 2 ISO PID PID:200021 NCBI chr17:4,766,616...4,777,253
Ensembl chr17:4,757,048...4,767,517 		JBrowse link
G ATM ATM serine/threonine kinase ISO PID PID:200031 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G BCL10 BCL10 immune signaling adaptor ISO PID PID:200031 NCBI chr 1:117,823,388...117,834,314 JBrowse link
G BCL3 BCL3 transcription coactivator ISO PID PID:200021 NCBI chr19:41,696,162...41,708,485
Ensembl chr19:50,304,171...50,313,005 		JBrowse link
G BIRC2 baculoviral IAP repeat containing 2 ISO PID PID:200031 NCBI chr11:97,298,736...97,324,966
Ensembl chr11:100,793,036...100,822,421 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase ISO RGD PMID:21135871 RGD:5490225 NCBI chr10:97,958,527...98,159,550
Ensembl chr10:101,431,318...101,632,496 		JBrowse link
G CHUK component of inhibitor of nuclear factor kappa B kinase complex ISO PID
RGD		 PMID:18267068 PID:200031 PID:200048 RGD:2292172 NCBI chr10:96,794,228...96,835,449
Ensembl chr10:100,280,490...100,316,918 		JBrowse link
G CSNK2A1 casein kinase 2 alpha 1 ISO PID PID:200021 NCBI chr20:689,494...752,092
Ensembl chr20:456,629...521,126 		JBrowse link
G CSNK2A2 casein kinase 2 alpha 2 ISO PID PID:200021 NCBI chr16:38,426,399...38,466,575
Ensembl chr16:57,557,270...57,596,218 		JBrowse link
G CSNK2B casein kinase 2 beta ISO PID PID:200021 NCBI chr 6:31,327,250...31,331,250 JBrowse link
G CUL1 cullin 1 ISO RGD PMID:21135871 RGD:5490225 NCBI chr 7:140,428,442...140,531,136
Ensembl chr 7:152,908,303...153,011,254 		JBrowse link
G CYLD CYLD lysine 63 deubiquitinase ISO PID
RGD		 PMID:21119682 PMID:23312890 PID:200031 RGD:7800734 RGD:7800735 NCBI chr16:31,004,393...31,064,546
Ensembl chr16:49,882,751...49,942,629 		JBrowse link
G ERC1 ELKS/RAB6-interacting/CAST family member 1 ISO PID PID:200031 NCBI chr12:1,066,034...1,597,562
Ensembl chr12:1,027,967...1,545,431 		JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta ISO PID
RGD		 PMID:18267068 PID:200021 PID:200031 RGD:2292172 NCBI chr 8:41,515,613...41,576,229
Ensembl chr 8:38,960,594...39,020,971 		JBrowse link
G IKBKG inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ISO PID
RGD		 PMID:18267068 PID:200031 RGD:2292172 NCBI chr  X:143,988,720...144,010,078
Ensembl chr  X:153,854,493...153,876,092 		JBrowse link
G IRF1 interferon regulatory factor 1 ISO RGD PMID:15141302 RGD:5128786 NCBI chr 5:127,903,887...127,913,843
Ensembl chr 5:134,067,441...134,075,035 		JBrowse link
G LCK LCK proto-oncogene, Src family tyrosine kinase ISO PID PID:200021 NCBI chr 1:31,560,229...31,572,391
Ensembl chr 1:32,565,739...32,579,923 		JBrowse link
G MALT1 MALT1 paracaspase ISO PID PID:200031 NCBI chr18:52,060,878...52,141,985
Ensembl chr18:55,395,462...55,473,574 		JBrowse link
G MAP3K14 mitogen-activated protein kinase kinase kinase 14 ISO PID
RGD		 PMID:18267068 PID:200048 RGD:2292172 NCBI chr17:12,011,037...12,064,978
Ensembl chr17:12,183,243...12,237,131 		JBrowse link
G MAP3K7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:21135871 PMID:30854566 RGD:155791647 RGD:5490225 NCBI chr 6:88,398,329...88,470,926
Ensembl chr 6:91,664,263...91,737,468 		JBrowse link
G MAPK14 mitogen-activated protein kinase 14 ISO PID PID:200021 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G NFKB1 nuclear factor kappa B subunit 1 ISO PID
RGD		 PMID:18267068 PMID:23975431 PID:200021 PID:200031 PID:200048 RGD:2292172 RGD:40902973 NCBI chr 4:94,925,048...95,040,849
Ensembl chr 4:105,589,062...105,704,098 		JBrowse link
G NFKB2 nuclear factor kappa B subunit 2 ISO PID
RGD		 PMID:18267068 PID:200048 RGD:2292172 NCBI chr10:98,997,604...99,006,407
Ensembl chr10:102,463,503...102,471,907 		JBrowse link
G NFKBIA NFKB inhibitor alpha ISO PID
RGD		 PMID:18267068 PID:200021 PID:200031 RGD:2292172 NCBI chr14:16,155,331...16,158,588 JBrowse link
G NFKBIB NFKB inhibitor beta ISO RGD PMID:18267068 RGD:2292172 NCBI chr19:36,005,797...36,015,897 JBrowse link
G NFKBIE NFKB inhibitor epsilon ISO RGD PMID:18267068 RGD:2292172 NCBI chr 6:43,853,921...43,861,686
Ensembl chr 6:45,138,209...45,144,680 		JBrowse link
G NOD2 nucleotide binding oligomerization domain containing 2 ISO PID PID:200031 NCBI chr16:30,955,976...30,995,451
Ensembl chr16:49,837,891...49,873,773 		JBrowse link
G PIK3CA phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO PID PID:200021 NCBI chr 3:176,182,765...176,272,024
Ensembl chr 3:184,355,785...184,441,977 		JBrowse link
G PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 ISO PID PID:200021 NCBI chr 5:45,701,219...45,786,652
Ensembl chr 5:47,267,286...47,350,960 		JBrowse link
G PRKCA protein kinase C alpha ISO PID PID:200031 NCBI chr17:60,246,485...60,747,158
Ensembl chr17:65,454,907...65,947,903 		JBrowse link
G RAN RAN, member RAS oncogene family ISO PID PID:200031 NCBI chr12:128,497,407...128,503,049
Ensembl chr12:132,694,498...132,699,668 		JBrowse link
G RBCK1 RANBP2-type and C3HC4-type zinc finger containing 1 ISO RGD PMID:23085193 RGD:7800730 NCBI chr20:615,987...639,366
Ensembl chr20:386,569...409,580 		JBrowse link
G RBX1 ring-box 1 ISO RGD PMID:21135871 RGD:5490225 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175 		JBrowse link
G REL REL proto-oncogene, NF-kB subunit ISO PID
RGD		 PMID:18267068 PID:200021 RGD:2292172 NCBI chr2A:60,972,022...61,013,562
Ensembl chr2A:62,113,581...62,155,241 		JBrowse link
G RELA RELA proto-oncogene, NF-kB subunit ISO PID
RGD		 PMID:18267068 PID:200021 PID:200031 RGD:2292172 NCBI chr11:61,012,839...61,022,225
Ensembl chr11:64,347,859...64,356,868 		JBrowse link
G RELB RELB proto-oncogene, NF-kB subunit ISO PID
RGD		 PMID:18267068 PID:200048 RGD:2292172 NCBI chr19:41,948,559...41,987,121
Ensembl chr19:50,554,864...50,590,223 		JBrowse link
G RIPK2 receptor interacting serine/threonine kinase 2 ISO PID PID:200031 NCBI chr 8:86,447,216...86,480,511
Ensembl chr 8:88,398,468...88,456,268 		JBrowse link
G RNF31 ring finger protein 31 ISO RGD PMID:23085193 RGD:7800730 NCBI chr14:4,923,391...4,936,959
Ensembl chr14:23,047,893...23,061,923 		JBrowse link
G SHARPIN SHANK associated RH domain interactor ISO RGD PMID:23085193 RGD:7800730 NCBI chr 8:140,865,009...140,870,580
Ensembl chr 8:143,854,902...143,862,888 		JBrowse link
G SKP1 S-phase kinase associated protein 1 ISO RGD PMID:21135871 RGD:5490225 NCBI chr 5:129,560,086...129,580,188
Ensembl chr 5:135,713,085...135,729,653 		JBrowse link
G SRC SRC proto-oncogene, non-receptor tyrosine kinase ISO PID PID:200021 NCBI chr20:33,667,614...33,727,126
Ensembl chr20:34,822,271...34,839,634 		JBrowse link
G SSPOP SCO-spondin, pseudogene ISO PID PID:200021 PID:200031 PID:200048 NCBI chr 7:141,477,578...141,537,109 JBrowse link
G SYK spleen associated tyrosine kinase ISO PID PID:200021 NCBI chr 9:61,859,767...61,956,619
Ensembl chr 9:89,959,599...90,056,101 		JBrowse link
G TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 ISO RGD PMID:21135871 RGD:5490225 NCBI chr22:20,303,547...20,343,314
Ensembl chr22:38,122,835...38,162,705 		JBrowse link
G TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 ISO RGD PMID:21135871 RGD:5490225 NCBI chr 6:147,138,553...147,231,559
Ensembl chr 6:151,868,513...151,936,841 		JBrowse link
G TAB3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 ISO RGD PMID:21135871 RGD:5490225 NCBI chr  X:23,428,343...23,489,688
Ensembl chr  X:30,980,841...31,012,994 		JBrowse link
G TNF tumor necrosis factor ISO PID PID:200031 NCBI chr 6:31,236,650...31,239,423
Ensembl chr 6:32,126,618...32,129,381 		JBrowse link
G TNFAIP3 TNF alpha induced protein 3 ISO PID PID:200031 NCBI chr 6:135,617,465...135,634,085
Ensembl chr 6:139,705,255...139,720,819 		JBrowse link
G TNFRSF1A TNF receptor superfamily member 1A ISO PID PID:200031 NCBI chr12:6,457,617...6,470,969
Ensembl chr12:6,374,257...6,387,613 		JBrowse link
G TRAF6 TNF receptor associated factor 6 ISO PID PID:200031 NCBI chr11:36,457,633...36,483,616
Ensembl chr11:36,335,609...36,356,334 		JBrowse link
G UBE2D3 ubiquitin conjugating enzyme E2 D3 ISO PID PID:200031 NCBI chr 4:95,218,319...95,293,053
Ensembl chr 4:105,883,133...105,900,546 		JBrowse link
G XPO1 exportin 1 ISO PID PID:200031 NCBI chr2A:61,562,372...61,622,841
Ensembl chr2A:62,698,935...62,757,793 		JBrowse link
nuclear factor of activated T-cells signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NFATC2 nuclear factor of activated T cells 2 ISO RGD PMID:15336966 RGD:1579951 NCBI chr20:47,734,054...47,910,435
Ensembl chr20:48,858,238...49,034,007 		JBrowse link
G NFATC3 nuclear factor of activated T cells 3 ISO RGD PMID:15336966 RGD:1579951 NCBI chr16:48,456,144...48,603,306
Ensembl chr16:67,888,806...67,996,274 		JBrowse link
G NFATC4 nuclear factor of activated T cells 4 ISO RGD PMID:15336966 RGD:1579951 NCBI chr14:5,141,699...5,156,021
Ensembl chr14:23,266,702...23,279,249 		JBrowse link
nuclear factor, erythroid 2 like 2 signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BRCA1 BRCA1 DNA repair associated ISO RGD PMID:24647116 RGD:11535066 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G BTRC beta-transducin repeat containing E3 ubiquitin protein ligase ISO RGD PMID:24647116 PMID:25937177 RGD:11535066 RGD:11535070 NCBI chr10:97,958,527...98,159,550
Ensembl chr10:101,431,318...101,632,496 		JBrowse link
G CDKN1A cyclin dependent kinase inhibitor 1A ISO RGD PMID:24647116 RGD:11535066 NCBI chr 6:36,241,405...36,250,032
Ensembl chr 6:37,436,990...37,445,599 		JBrowse link
G CHD6 chromodomain helicase DNA binding protein 6 ISO RGD PMID:24647116 RGD:11535066 NCBI chr20:37,744,012...37,953,593
Ensembl chr20:38,839,685...38,999,501 		JBrowse link
G CREBBP CREB binding protein ISO RGD PMID:24647116 RGD:11535066 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G CUL1 cullin 1 ISO RGD PMID:24647116 RGD:11535066 NCBI chr 7:140,428,442...140,531,136
Ensembl chr 7:152,908,303...153,011,254 		JBrowse link
G CUL3 cullin 3 ISO RGD PMID:24647116 RGD:11535066 NCBI chr2B:111,714,533...111,827,080
Ensembl chr2B:230,289,195...230,378,991 		JBrowse link
G DPP3 dipeptidyl peptidase 3 ISO RGD PMID:24647116 RGD:11535066 NCBI chr11:61,836,463...61,867,303
Ensembl chr11:65,161,892...65,191,398 		JBrowse link
G GADD45GIP1 GADD45G interacting protein 1 ISO RGD PMID:24647116 RGD:11535066 NCBI chr19:12,516,581...12,519,673
Ensembl chr19:13,259,047...13,262,044 		JBrowse link
G GSK3A glycogen synthase kinase 3 alpha ISO RGD PMID:25937177 RGD:11535070 NCBI chr19:39,118,330...39,130,768
Ensembl chr19:47,710,197...47,726,948 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO RGD PMID:25937177 RGD:11535070 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G IKBKB inhibitor of nuclear factor kappa B kinase subunit beta ISO RGD PMID:24647116 RGD:11535066 NCBI chr 8:41,515,613...41,576,229
Ensembl chr 8:38,960,594...39,020,971 		JBrowse link
G KEAP1 kelch like ECH associated protein 1 ISO RGD PMID:11439354 PMID:20026152 PMID:24647116 PMID:26419687 RGD:11530066 RGD:11535066 RGD:6902900 RGD:727319 NCBI chr19:10,037,544...10,055,091
Ensembl chr19:10,701,303...10,717,604 		JBrowse link
G MAFF MAF bZIP transcription factor F ISO RGD PMID:24647116 RGD:11535066 NCBI chr22:19,114,929...19,129,901 JBrowse link
G MAFG MAF bZIP transcription factor G ISO RGD PMID:24647116 RGD:11535066 NCBI chr17:76,323,874...76,333,300
Ensembl chr17:82,030,699...82,031,278 		JBrowse link
G MAFK MAF bZIP transcription factor K ISO RGD PMID:24647116 RGD:11535066 NCBI chr 7:1,778,862...1,791,163
Ensembl chr 7:1,904,031...1,909,774 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:24647116 RGD:11535066 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NFE2L2 NFE2 like bZIP transcription factor 2 ISO RGD PMID:24647116 PMID:25937177 PMID:26419687 RGD:11530066 RGD:11535066 RGD:11535070 NCBI chr2B:64,509,446...64,544,600
Ensembl chr2B:182,214,116...182,248,085 		JBrowse link
G NQO1 NAD(P)H quinone dehydrogenase 1 ISO RGD PMID:31432116 PMID:31889292 RGD:21201308 RGD:25823187 NCBI chr16:50,090,696...50,106,495
Ensembl chr16:69,470,288...69,489,731 		JBrowse link
G PALB2 partner and localizer of BRCA2 ISO RGD PMID:24647116 RGD:11535066 NCBI chr16:14,470,367...14,507,841
Ensembl chr16:23,855,535...23,892,117 		JBrowse link
G PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase ISO RGD PMID:24647116 RGD:11535066
G PTEN phosphatase and tensin homolog ISO RGD PMID:25937177 RGD:11535070 NCBI chr10:84,587,841...84,689,043
Ensembl chr10:88,093,539...88,194,605 		JBrowse link
G RBX1 ring-box 1 ISO RGD PMID:24647116 RGD:11535066 NCBI chr22:21,845,351...21,866,627
Ensembl chr22:39,941,405...39,962,175 		JBrowse link
G RNF4 ring finger protein 4 ISO RGD PMID:24647116 RGD:11535066 NCBI chr 4:2,614,918...2,661,785
Ensembl chr 4:2,540,612...2,563,937 		JBrowse link
G SIAH2 siah E3 ubiquitin protein ligase 2 ISO RGD PMID:24647116 RGD:11535066 NCBI chr 3:147,759,375...147,781,639
Ensembl chr 3:155,332,751...155,354,139 		JBrowse link
G SKP1 S-phase kinase associated protein 1 ISO RGD PMID:24647116 RGD:11535066 NCBI chr 5:129,560,086...129,580,188
Ensembl chr 5:135,713,085...135,729,653 		JBrowse link
G SQSTM1 sequestosome 1 ISO RGD PMID:24647116 RGD:11535066 NCBI chr 5:174,960,727...174,989,946
Ensembl chr 5:182,284,436...182,299,093 		JBrowse link
p53 signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase ISO PID
RGD		 PMID:20679336 PID:200206 RGD:8662965 NCBI chr 9:101,834,189...102,005,811
Ensembl chr 9:130,484,333...130,652,941 		JBrowse link
G AKT1 AKT serine/threonine kinase 1 ISO PID PID:200206 NCBI chr14:85,417,229...85,444,722
Ensembl chr14:105,208,128...105,236,756 		JBrowse link
G ATM ATM serine/threonine kinase ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr11:103,109,979...103,256,405
Ensembl chr11:106,584,228...106,727,041 		JBrowse link
G ATR ATR serine/threonine kinase ISO PID PID:200206 NCBI chr 3:139,482,606...139,612,274
Ensembl chr 3:147,075,185...147,196,261 		JBrowse link
G BRCA1 BRCA1 DNA repair associated ISO RGD PMID:20679336 RGD:8662965 NCBI chr17:14,197,946...14,279,064
Ensembl chr17:14,428,526...14,506,815 		JBrowse link
G CCNA2 cyclin A2 ISO PID PID:200206 NCBI chr 4:114,016,917...114,024,816
Ensembl chr 4:125,153,810...125,161,302 		JBrowse link
G CCNG1 cyclin G1 ISO PID PID:200206 NCBI chr 5:158,814,563...158,822,019
Ensembl chr 5:165,592,971...165,598,728 		JBrowse link
G CDK2 cyclin dependent kinase 2 ISO PID PID:200206 NCBI chr12:32,940,225...32,946,236
Ensembl chr12:33,189,934...33,195,945 		JBrowse link
G CHEK1 checkpoint kinase 1 ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr11:120,446,352...120,478,207
Ensembl chr11:124,359,218...124,390,981 		JBrowse link
G CHEK2 checkpoint kinase 2 ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr22:9,757,038...9,811,171 JBrowse link
G COP1 COP1 E3 ubiquitin ligase ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr 1:151,459,354...151,727,131
Ensembl chr 1:155,156,185...155,425,156 		JBrowse link
G CREBBP CREB binding protein ISO PID
RGD		 PMID:19450511 PMID:20679336 PID:200206 RGD:2316155 RGD:8662965 NCBI chr16:2,645,445...2,800,975
Ensembl chr16:3,820,519...3,974,206 		JBrowse link
G CSE1L chromosome segregation 1 like ISO PID PID:200206 NCBI chr20:45,386,124...45,436,283
Ensembl chr20:46,452,485...46,502,207 		JBrowse link
G CSNK1A1 casein kinase 1 alpha 1 ISO PID PID:200206 NCBI chr 5:144,919,775...144,977,105
Ensembl chr 5:150,929,420...150,985,912 		JBrowse link
G CSNK1D casein kinase 1 delta ISO PID PID:200206 NCBI chr17:76,648,677...76,683,054
Ensembl chr17:82,462,467...82,494,348 		JBrowse link
G CSNK1E casein kinase 1 epsilon ISO PID PID:200206 NCBI chr22:19,202,599...19,229,344
Ensembl chr22:37,027,094...37,072,942 		JBrowse link
G CSNK1G1 casein kinase 1 gamma 1 ISO PID PID:200206 NCBI chr15:43,117,845...43,302,134
Ensembl chr15:61,410,414...61,594,180 		JBrowse link
G CSNK1G2 casein kinase 1 gamma 2 ISO PID PID:200206
G CSNK1G3 casein kinase 1 gamma 3 ISO PID PID:200206 NCBI chr 5:118,903,016...119,008,030
Ensembl chr 5:124,683,566...124,786,916 		JBrowse link
G DAXX death domain associated protein ISO PID PID:200206 NCBI chr 6:32,890,846...32,895,307
Ensembl chr 6:34,004,543...34,008,717 		JBrowse link
G DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 ISO PID PID:200206 NCBI chr12:21,241,325...21,260,321
Ensembl chr12:21,757,436...21,767,505 		JBrowse link
G E4F1 E4F transcription factor 1 ISO PID PID:200206 NCBI chr16:1,080,205...1,092,996
Ensembl chr16:2,323,461...2,335,695 		JBrowse link
G EP300 E1A binding protein p300 ISO PID PID:200206 NCBI chr22:21,986,467...22,076,921
Ensembl chr22:40,079,503...40,168,604 		JBrowse link
G FBXO11 F-box protein 11 ISO PID PID:200206 NCBI chr2A:47,926,629...48,026,245
Ensembl chr2A:48,830,780...48,886,300 		JBrowse link
G GSK3B glycogen synthase kinase 3 beta ISO PID PID:200206 NCBI chr 3:116,943,205...117,215,001
Ensembl chr 3:123,861,379...124,126,771 		JBrowse link
G HDAC1 histone deacetylase 1 ISO RGD PMID:19450511 RGD:2316155 NCBI chr 1:31,578,373...31,619,970
Ensembl chr 1:32,585,791...32,626,410 		JBrowse link
G HIPK2 homeodomain interacting protein kinase 2 ISO PID PID:200206 NCBI chr 7:131,506,711...131,722,943 JBrowse link
G HUWE1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ISO PID PID:200206 NCBI chr  X:45,746,228...45,897,250
Ensembl chr  X:53,855,404...54,005,366 		JBrowse link
G KAT2A lysine acetyltransferase 2A ISO RGD PMID:20679336 RGD:8662965 NCBI chr17:15,194,414...15,202,818
Ensembl chr17:15,416,075...15,424,197 		JBrowse link
G KAT2B lysine acetyltransferase 2B ISO PID
RGD		 PMID:20679336 PID:200206 RGD:8662965 NCBI chr 3:19,956,067...20,070,637
Ensembl chr 3:20,286,865...20,400,770 		JBrowse link
G KAT5 lysine acetyltransferase 5 ISO PID
RGD		 PMID:19450511 PMID:20679336 PID:200206 RGD:2316155 RGD:8662965 NCBI chr11:61,071,118...61,078,667
Ensembl chr11:64,404,572...64,412,667 		JBrowse link
G KAT8 lysine acetyltransferase 8 ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr16:23,837,540...23,851,376
Ensembl chr16:31,486,098...31,500,185 		JBrowse link
G KMT5A lysine methyltransferase 5A ISO PID PID:200206 NCBI chr12:120,982,059...121,007,360 JBrowse link
G MAPK14 mitogen-activated protein kinase 14 ISO PID PID:200206 NCBI chr 6:35,586,847...35,683,041
Ensembl chr 6:36,788,233...36,871,114 		JBrowse link
G MAPK8 mitogen-activated protein kinase 8 ISO PID PID:200206 NCBI chr10:45,806,748...45,936,362 JBrowse link
G MAPK9 mitogen-activated protein kinase 9 ISO PID PID:200206 NCBI chr 5:175,437,167...175,495,469
Ensembl chr 5:182,748,381...182,795,135 		JBrowse link
G MDM2 MDM2 proto-oncogene ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr12:66,322,340...66,357,010
Ensembl chr12:69,102,084...69,133,278 		JBrowse link
G MDM4 MDM4 regulator of p53 ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr 1:180,117,364...180,151,144
Ensembl chr 1:184,406,124...184,439,344 		JBrowse link
G MUC1 mucin 1, cell surface associated ISO RGD PMID:20679336 RGD:8662965 NCBI chr 1:130,533,508...130,537,866
Ensembl chr 1:134,141,969...134,145,850 		JBrowse link
G NEDD8 NEDD8 ubiquitin like modifier ISO PID PID:200206 NCBI chr14:4,993,011...5,008,620
Ensembl chr14:23,117,271...23,132,249 		JBrowse link
G PIN1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO PID
RGD		 PMID:20679336 PID:200206 RGD:8662965 NCBI chr19:9,389,829...9,404,099
Ensembl chr19:10,053,254...10,066,853 		JBrowse link
G POU4F1 POU class 4 homeobox 1 ISO RGD PMID:20679336 RGD:8662965 NCBI chr13:59,821,614...59,829,671 JBrowse link
G POU4F2 POU class 4 homeobox 2 ISO RGD PMID:20679336 RGD:8662965 NCBI chr 4:138,969,157...138,972,730
Ensembl chr 4:150,626,392...150,629,961 		JBrowse link
G PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D ISO PID PID:200206 NCBI chr17:54,698,338...54,761,889
Ensembl chr17:59,824,566...59,887,015 		JBrowse link
G PPP1R13B protein phosphatase 1 regulatory subunit 13B ISO RGD PMID:20679336 RGD:8662965 NCBI chr14:84,359,917...84,474,892
Ensembl chr14:104,168,873...104,232,974 		JBrowse link
G PPP1R13L protein phosphatase 1 regulatory subunit 13 like ISO PID
RGD		 PMID:20679336 PID:200206 RGD:8662965 NCBI chr19:42,328,814...42,355,088 JBrowse link
G PPP2CA protein phosphatase 2 catalytic subunit alpha ISO PID PID:200206 NCBI chr 5:129,599,606...129,629,312
Ensembl chr 5:135,751,958...135,765,786 		JBrowse link
G PRKCD protein kinase C delta ISO PID PID:200206 NCBI chr 3:53,104,137...53,135,588
Ensembl chr 3:54,330,328...54,357,910 		JBrowse link
G PRMT5 protein arginine methyltransferase 5 ISO PID PID:200206 NCBI chr14:3,737,741...3,746,646
Ensembl chr14:21,836,984...21,846,018 		JBrowse link
G PTPA protein phosphatase 2 phosphatase activator ISO PID PID:200206 NCBI chr 9:100,236,607...100,274,273
Ensembl chr 9:128,896,584...128,934,651 		JBrowse link
G RASSF1 Ras association domain family member 1 ISO PID PID:200206 NCBI chr 3:50,255,897...50,267,042
Ensembl chr 3:51,491,548...51,502,392 		JBrowse link
G RCHY1 ring finger and CHY zinc finger domain containing 1 ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr 4:48,691,213...48,725,979
Ensembl chr 4:54,526,202...54,561,048 		JBrowse link
G RPL11 ribosomal protein L11 ISO PID PID:200206 NCBI chr 1:22,883,157...22,887,806
Ensembl chr 1:23,868,688...23,873,313 		JBrowse link
G RPL23 ribosomal protein L23 ISO PID PID:200206 NCBI chr17:18,417,964...18,421,708
Ensembl chr17:18,690,682...18,698,253 		JBrowse link
G RPL5 ribosomal protein L5 ISO PID PID:200206 NCBI chr 1:95,497,047...95,507,006
Ensembl chr 1:94,230,451...94,241,522 		JBrowse link
G SETD7 SET domain containing 7, histone lysine methyltransferase ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr 4:131,869,999...131,921,342
Ensembl chr 4:143,167,190...143,227,732 		JBrowse link
G SIRT1 sirtuin 1 ISO RGD PMID:19450511 RGD:2316155 NCBI chr10:64,368,878...64,401,684
Ensembl chr10:66,681,598...66,715,069 		JBrowse link
G SKP2 S-phase kinase associated protein 2 ISO PID PID:200206 NCBI chr 5:74,179,608...74,211,563
Ensembl chr 5:79,461,018...79,492,311 		JBrowse link
G SMYD2 SET and MYND domain containing 2 ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr 1:189,849,167...189,905,193
Ensembl chr 1:194,729,116...194,761,045 		JBrowse link
G TP53 tumor protein p53 ISO PID
RGD		 PMID:16601750 PMID:19450511 PID:200206 RGD:2316155 RGD:2316156 NCBI chr17:7,699,449...7,717,812
Ensembl chr17:7,684,922...7,706,120 		JBrowse link
G TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 ISO PID PID:200206 NCBI chr11:123,748,770...123,757,797
Ensembl chr11:127,650,841...127,659,213 		JBrowse link
G TP53BP2 tumor protein p53 binding protein 2 ISO RGD PMID:20679336 RGD:8662965 NCBI chr 1:199,403,194...199,469,079
Ensembl chr 1:204,414,218...204,457,739 		JBrowse link
G TRIM28 tripartite motif containing 28 ISO PID PID:200206 NCBI chr19:55,557,130...55,563,802
Ensembl chr19:64,371,477...64,377,144 		JBrowse link
G TTC5 tetratricopeptide repeat domain 5 ISO PID PID:200206 NCBI chr14:1,163,280...1,180,212
Ensembl chr14:19,216,993...19,233,797 		JBrowse link
G UBE2D1 ubiquitin conjugating enzyme E2 D1 ISO PID PID:200206 NCBI chr10:54,867,346...54,903,125
Ensembl chr10:57,087,811...57,123,581 		JBrowse link
G USP7 ubiquitin specific peptidase 7 ISO PID
RGD		 PMID:19450511 PID:200206 RGD:2316155 NCBI chr16:7,825,332...7,895,095
Ensembl chr16:9,065,858...9,106,146 		JBrowse link
G YBX1 Y-box binding protein 1 ISO RGD PMID:20679336 RGD:8662965 NCBI chr 1:41,982,365...42,002,430
Ensembl chr 1:43,360,052...43,380,313 		JBrowse link
G YY1 YY1 transcription factor ISO PID PID:200206 NCBI chr14:80,859,491...80,903,651 JBrowse link
G ZNF385A zinc finger protein 385A ISO RGD PMID:20679336 RGD:8662965 NCBI chr12:34,353,975...34,376,172
Ensembl chr12:35,080,820...35,102,248 		JBrowse link
G ZNF420 zinc finger protein 420 ISO RGD PMID:20679336 RGD:8662965 NCBI chr19:34,039,699...34,093,881 JBrowse link
G ZNHIT1 zinc finger HIT-type containing 1 ISO RGD PMID:20679336 RGD:8662965 NCBI chr 7:93,359,038...93,365,521
Ensembl chr 7:106,599,579...106,606,157 		JBrowse link
retinoic acid signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NCOA1 nuclear receptor coactivator 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chr2A:24,485,068...24,764,135
Ensembl chr2A:24,733,117...24,859,488 		JBrowse link
G NCOA2 nuclear receptor coactivator 2 ISO RGD PMID:19471584 RGD:6484676 NCBI chr 8:66,632,139...66,929,526
Ensembl chr 8:68,293,018...68,400,479 		JBrowse link
G NCOA3 nuclear receptor coactivator 3 ISO RGD PMID:19471584 RGD:6484676 NCBI chr20:43,838,227...43,992,407
Ensembl chr20:45,000,422...45,073,549 		JBrowse link
G NCOR1 nuclear receptor corepressor 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chr17:34,934,452...35,121,195 JBrowse link
G NCOR2 nuclear receptor corepressor 2 ISO RGD PMID:19471584 RGD:6484676 NCBI chr12:121,913,368...122,155,031
Ensembl chr12:126,201,779...126,372,745 		JBrowse link
G NRIP1 nuclear receptor interacting protein 1 ISO RGD PMID:19471584 RGD:6484676 NCBI chr21:1,565,149...1,801,358
Ensembl chr21:15,065,197...15,068,673 		JBrowse link
G PSMC5 proteasome 26S subunit, ATPase 5 ISO RGD PMID:19471584 RGD:6484676 NCBI chr17:57,906,934...57,911,551
Ensembl chr17:63,051,050...63,055,907 		JBrowse link
G RARA retinoic acid receptor alpha ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chr17:16,932,485...16,980,958 JBrowse link
G RARB retinoic acid receptor beta ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chr 3:24,729,220...25,499,187
Ensembl chr 3:25,660,922...25,833,297 		JBrowse link
G RARG retinoic acid receptor gamma ISO RGD PMID:17132850 PMID:17320364 PMID:19471584 RGD:6484674 RGD:6484676 RGD:6484731 NCBI chr12:35,521,276...35,542,814
Ensembl chr12:36,303,359...36,325,111 		JBrowse link
G RXRA retinoid X receptor alpha ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chr 9:105,424,046...105,539,241
Ensembl chr 9:134,082,865...134,144,704 		JBrowse link
G RXRB retinoid X receptor beta ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chr 6:32,765,818...32,772,876
Ensembl chr 6:33,880,758...33,887,820 		JBrowse link
G RXRG retinoid X receptor gamma ISO RGD PMID:17132853 PMID:17320364 RGD:6484675 RGD:6484731 NCBI chr 1:140,832,717...140,877,046
Ensembl chr 1:144,623,133...144,723,494 		JBrowse link
G TRIM24 tripartite motif containing 24 ISO RGD PMID:19471584 RGD:6484676 NCBI chr 7:130,420,334...130,547,489
Ensembl chr 7:142,909,009...143,036,526 		JBrowse link
sterol regulatory element-binding protein signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G INSIG1 insulin induced gene 1 ISO RGD PMID:19933148 RGD:2317203 NCBI chr 7:146,893,730...146,906,329
Ensembl chr 7:158,619,531...158,632,012 		JBrowse link
G INSIG2 insulin induced gene 2 ISO RGD PMID:19933148 RGD:2317203 NCBI chr2B:5,046,971...5,068,757
Ensembl chr2B:118,632,402...118,652,647 		JBrowse link
G MBTPS1 membrane bound transcription factor peptidase, site 1 ISO RGD PMID:19933148 RGD:2317203 NCBI chr16:64,719,971...64,783,119
Ensembl chr16:84,063,508...84,126,000 		JBrowse link
G MBTPS2 membrane bound transcription factor peptidase, site 2 ISO RGD PMID:19933148 RGD:2317203 NCBI chr  X:14,470,268...14,529,854
Ensembl chr  X:21,825,780...21,883,550 		JBrowse link
G SCAP SREBF chaperone ISO RGD PMID:19933148 RGD:2317203 NCBI chr 3:47,314,535...47,379,455
Ensembl chr 3:48,414,012...48,479,845 		JBrowse link
G SREBF1 sterol regulatory element binding transcription factor 1 ISO RGD PMID:19933148 RGD:2317203 NCBI chr17:33,458,196...33,484,643
Ensembl chr17:38,405,794...38,432,045 		JBrowse link
G SREBF2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:19933148 RGD:2317203 NCBI chr22:22,725,790...22,799,749
Ensembl chr22:40,811,459...40,884,947 		JBrowse link
Term paths to the root