NR2F2 (nuclear receptor subfamily 2 group F member 2) - Rat Genome Database

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Pathways
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Gene: NR2F2 (nuclear receptor subfamily 2 group F member 2) Pan paniscus
Analyze
Symbol: NR2F2
Name: nuclear receptor subfamily 2 group F member 2
RGD ID: 12034903
Description: ENCODES a protein that exhibits protein homodimerization activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blood vessel morphogenesis (ortholog); female gonad development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 5 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); nucleoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: COUP transcription factor 2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21685,870,526 - 85,903,632 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11589,569,489 - 89,582,674 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01575,008,879 - 75,021,981 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11594,196,494 - 94,210,599 (+)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (IEA)
nucleoplasm  (IEA)
nucleus  (IEA)

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
NR2F2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21685,870,526 - 85,903,632 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11589,569,489 - 89,582,674 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01575,008,879 - 75,021,981 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11594,196,494 - 94,210,599 (+)NCBIpanpan1.1PanPan1.1panPan2
NR2F2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381596,326,046 - 96,340,263 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1596,325,938 - 96,340,263 (+)EnsemblGRCh38hg38GRCh38
GRCh371596,869,275 - 96,883,492 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361594,674,950 - 94,683,048 (+)NCBINCBI36Build 36hg18NCBI36
Build 341594,674,949 - 94,683,045NCBI
Celera1573,285,358 - 73,299,693 (+)NCBICelera
Cytogenetic Map15q26.2NCBI
HuRef1572,999,792 - 73,013,983 (+)NCBIHuRef
CHM1_11596,711,246 - 96,725,580 (+)NCBICHM1_1
T2T-CHM13v2.01594,090,629 - 94,104,848 (+)NCBIT2T-CHM13v2.0
Nr2f2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39770,001,694 - 70,016,494 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl770,001,692 - 70,016,483 (-)EnsemblGRCm39 Ensembl
GRCm38770,351,946 - 70,366,746 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl770,351,944 - 70,366,735 (-)EnsemblGRCm38mm10GRCm38
MGSCv37777,496,836 - 77,511,632 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36770,226,952 - 70,240,235 (-)NCBIMGSCv36mm8
Celera767,807,423 - 67,836,911 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map738.66NCBI
Nr2f2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81133,419,161 - 133,434,290 (-)NCBIGRCr8
mRatBN7.21124,008,282 - 124,022,521 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1124,009,181 - 124,022,031 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1132,007,025 - 132,012,975 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01139,177,092 - 139,183,046 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01131,989,976 - 131,995,932 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01131,447,671 - 131,465,749 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1131,448,447 - 131,460,473 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01132,486,697 - 132,499,845 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41125,280,974 - 125,286,929 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11125,359,316 - 125,365,272 (-)NCBI
Celera1116,179,533 - 116,185,445 (-)NCBICelera
Cytogenetic Map1q31NCBI
Nr2f2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541624,141,888 - 24,168,585 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541624,148,052 - 24,154,406 (+)NCBIChiLan1.0ChiLan1.0
NR2F2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1344,135,143 - 44,148,836 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl344,136,463 - 44,148,524 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha346,838,728 - 46,852,294 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0344,548,234 - 44,561,807 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl344,475,116 - 44,561,446 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1344,070,866 - 44,084,429 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0344,300,713 - 44,314,268 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0344,625,819 - 44,639,411 (-)NCBIUU_Cfam_GSD_1.0
Nr2f2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640139,433,402 - 139,446,616 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364836,886,153 - 6,900,997 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364836,886,447 - 6,900,986 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR2F2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl783,076,124 - 83,090,535 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1783,076,119 - 83,090,250 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2788,960,806 - 88,972,751 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NR2F2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12914,889,526 - 14,901,848 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2914,891,737 - 14,903,813 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605931,706,856 - 31,720,520 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr2f2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247687,701,674 - 7,728,408 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247687,713,771 - 7,728,102 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008969887   ⟹   XP_008968135
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21685,870,526 - 85,884,903 (+)NCBI
NHGRI_mPanPan11589,569,489 - 89,582,674 (+)NCBI
Mhudiblu_PPA_v01575,008,879 - 75,021,981 (+)NCBI
PanPan1.11594,196,494 - 94,210,599 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014341594   ⟹   XP_014197080
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21685,878,049 - 85,884,903 (+)NCBI
NHGRI_mPanPan11589,574,861 - 89,582,674 (+)NCBI
Mhudiblu_PPA_v01575,013,735 - 75,021,981 (+)NCBI
PanPan1.11594,202,619 - 94,210,599 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034939477   ⟹   XP_034795368
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21685,879,675 - 85,903,632 (+)NCBI
NHGRI_mPanPan11589,577,455 - 89,582,674 (+)NCBI
Mhudiblu_PPA_v01575,015,822 - 75,021,981 (+)NCBI
RefSeq Acc Id: XM_034939478   ⟹   XP_034795369
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21685,878,601 - 85,884,903 (+)NCBI
NHGRI_mPanPan11589,576,376 - 89,582,674 (+)NCBI
Mhudiblu_PPA_v01575,015,683 - 75,021,981 (+)NCBI
Protein Sequences
Protein RefSeqs XP_008968135 (Get FASTA)   NCBI Sequence Viewer  
  XP_014197080 (Get FASTA)   NCBI Sequence Viewer  
  XP_034795368 (Get FASTA)   NCBI Sequence Viewer  
  XP_034795369 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000013040.1
  ENSPPAP00000016362.1
Reference Protein Sequences
RefSeq Acc Id: XP_008968135   ⟸   XM_008969887
- Peptide Label: isoform X2
- UniProtKB: A0A2R9AG90 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_014197080   ⟸   XM_014341594
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A820 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_034795369   ⟸   XM_034939478
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AG90 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034795368   ⟸   XM_034939477
- Peptide Label: isoform X3
- UniProtKB: A0A2R9AG90 (UniProtKB/TrEMBL)
Protein Domains
NR LBD   Nuclear receptor


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000029692 UniProtKB/TrEMBL
  ENSPPAG00000031306 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035708.1 UniProtKB/TrEMBL
  ENSPPAT00000039057.1 UniProtKB/TrEMBL
Gene3D-CATH Erythroid Transcription Factor GATA-1, subunit A UniProtKB/TrEMBL
  Retinoid X Receptor UniProtKB/TrEMBL
InterPro NHR-like_dom_sf UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/TrEMBL
  Znf_hrmn_rcpt UniProtKB/TrEMBL
  Znf_NHR/GATA UniProtKB/TrEMBL
NCBI Gene NR2F2 ENTREZGENE
PANTHER COUP TRANSCRIPTION FACTOR 1 UniProtKB/TrEMBL
  COUP TRANSCRIPTION FACTOR 2 UniProtKB/TrEMBL
  NUCLEAR HORMONE RECEPTOR UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/TrEMBL
  zf-C4 UniProtKB/TrEMBL
PRINTS COUPTNFACTOR UniProtKB/TrEMBL
  STRDHORMONER UniProtKB/TrEMBL
  STROIDFINGER UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_1 UniProtKB/TrEMBL
  NUCLEAR_REC_DBD_2 UniProtKB/TrEMBL
SMART HOLI UniProtKB/TrEMBL
  ZnF_C4 UniProtKB/TrEMBL
Superfamily-SCOP Glucocorticoid receptor-like (DNA-binding domain) UniProtKB/TrEMBL
  Nuclear receptor ligand-binding domain UniProtKB/TrEMBL
UniProt A0A2R9A820 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9AG90 ENTREZGENE, UniProtKB/TrEMBL