CCNG1 (cyclin G1) - Rat Genome Database

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Gene: CCNG1 (cyclin G1) Pan paniscus
Analyze
Symbol: CCNG1
Name: cyclin G1
RGD ID: 12007788
Description: INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); response to gravity (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cyclin-G1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24158,610,583 - 158,624,484 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15156,750,429 - 156,757,885 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05158,814,563 - 158,822,019 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15165,591,279 - 165,598,728 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5165,592,971 - 165,598,728 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 20 of 35 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCNG1BonoboAlzheimer's disease  ISOCCNG1 (Homo sapiens)9068941protein:increased expression:brain and neuronRGDPMID:12214116 and REF_RGD_ID:2316025
CCNG1Bonobobreast adenocarcinoma  ISOCcng1 (Mus musculus)9068941mRNA and protein:altered expression:mammary (mouse)RGDPMID:11146550 and REF_RGD_ID:2315939
CCNG1Bonobobreast cancer treatmentISOCcng1 (Rattus norvegicus)9068941 RGDPMID:23791885 and REF_RGD_ID:151356928
CCNG1Bonobocervix uteri carcinoma in situ  ISOCCNG1 (Homo sapiens)9068941protein:increased expression:uterine cervixRGDPMID:16845792 and REF_RGD_ID:2316022
CCNG1BonoboExperimental Liver Neoplasms  ISOCcng1 (Mus musculus)9068941 RGDPMID:27982046 and REF_RGD_ID:151361200
CCNG1Bonobohead and neck cancer  ISOCCNG1 (Homo sapiens)9068941mRNA:decreased expression:head and neck (human)RGDPMID:27982046 and REF_RGD_ID:151361200
CCNG1Bonobohepatocellular carcinoma treatmentISOCcng1 (Rattus norvegicus)9068941 RGDPMID:24034575 more ...
CCNG1Bonobohepatocellular carcinoma treatmentISOCCNG1 (Homo sapiens)9068941human cells in mouse modelRGDPMID:33543294 and REF_RGD_ID:151356970
CCNG1Bonobohepatocellular carcinoma severityISOCCNG1 (Homo sapiens)9068941protein:increased expression:liver (human)RGDPMID:19584283 and REF_RGD_ID:151356981
CCNG1Bonobohepatocellular carcinoma disease_progressionISOCCNG1 (Homo sapiens)9068941protein:increased expression:liver (human)RGDPMID:23804702 and REF_RGD_ID:151356967
CCNG1Bonobohepatocellular carcinoma  ISONotch3 (Rattus norvegicus)9068941 RGDPMID:25431954 and REF_RGD_ID:151356922
CCNG1Bonobohepatocellular carcinoma  ISOCCNG1 (Homo sapiens)9068941human cells in mouse modelRGDPMID:23804702 and REF_RGD_ID:151356967
CCNG1Bonobohepatocellular carcinoma  ISOCcng1 (Mus musculus)9068941 RGDPMID:27982046 and REF_RGD_ID:151361200
CCNG1Bonobohepatocellular carcinoma severityISOCCNG1 (Homo sapiens)9068941protein:decreased expression:liver (human)RGDPMID:22835824 and REF_RGD_ID:151361198
CCNG1Bonoboleiomyoma  ISOCCNG1 (Homo sapiens)9068941mRNA more ...RGDPMID:12634633 and REF_RGD_ID:2316023
CCNG1BonoboLiver Metastasis treatmentISOCCNG1 (Homo sapiens)9068941human cells in mouse modelRGDPMID:10910035 and REF_RGD_ID:151356987
CCNG1Bonobolocalized osteosarcoma treatmentISOCCNG1 (Homo sapiens)9068941human cells in mouse modelRGDPMID:9322869 and REF_RGD_ID:151356969
CCNG1Bonobolung cancer treatmentISOCCNG1 (Homo sapiens)9068941human cells in mouse modelRGDPMID:25472877 and REF_RGD_ID:151361106
CCNG1Bonobolung metastasis  ISOCcng1 (Mus musculus)9068941 RGDPMID:30565428 and REF_RGD_ID:151361205
CCNG1Bonobomuscular atrophy  ISOCcng1 (Rattus norvegicus)9068941associated with microgravity and mRNA:increased expression:gastrocnemius (rat)RGDPMID:14638460 and REF_RGD_ID:151361116
1 to 20 of 35 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCNG1Bonobohereditary breast ovarian cancer syndrome  ISOCCNG1 (Homo sapiens)8554872ClinVar Annotator: match by term: Hereditary breast ovarian cancer syndromeClinVarPMID:25741868
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCNG1BonoboExperimental Liver Cirrhosis  ISOCCNG1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:25380136
CCNG1BonoboLung Neoplasms  ISOCCNG1 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:16289808


Biological Process

  

Cellular Component

  

Molecular Function

  

Imported Annotations - PID (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
CCNG1Bonobop53 signaling pathway   ISOCCNG1 (Homo sapiens)9068941 PIDPID:200206
PMID:30032202  



CCNG1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24158,610,583 - 158,624,484 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15156,750,429 - 156,757,885 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05158,814,563 - 158,822,019 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15165,591,279 - 165,598,728 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5165,592,971 - 165,598,728 (+)Ensemblpanpan1.1panPan2
CCNG1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385163,437,571 - 163,457,640 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5163,437,569 - 163,448,199 (+)EnsemblGRCh38hg38GRCh38
GRCh375162,864,577 - 162,875,205 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 365162,797,155 - 162,804,600 (+)NCBINCBI36Build 36hg18NCBI36
Build 345162,797,154 - 162,804,598NCBI
Celera5158,898,684 - 158,906,130 (+)NCBICelera
Cytogenetic Map5q34NCBI
HuRef5157,964,260 - 157,971,705 (+)NCBIHuRef
CHM1_15162,297,037 - 162,304,482 (+)NCBICHM1_1
T2T-CHM13v2.05163,972,739 - 163,983,375 (+)NCBIT2T-CHM13v2.0
Ccng1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391140,639,379 - 40,646,044 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1140,639,379 - 40,646,138 (-)EnsemblGRCm39 Ensembl
GRCm381140,748,552 - 40,755,309 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1140,748,552 - 40,755,311 (-)EnsemblGRCm38mm10GRCm38
MGSCv371140,562,054 - 40,568,788 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361140,591,975 - 40,598,709 (-)NCBIMGSCv36mm8
Celera1144,600,600 - 44,607,334 (-)NCBICelera
Cytogenetic Map11A5NCBI
cM Map1124.42NCBI
Ccng1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81025,678,503 - 25,684,876 (-)NCBIGRCr8
mRatBN7.21025,176,231 - 25,182,604 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1025,176,234 - 25,181,641 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1029,938,596 - 29,945,089 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01029,427,123 - 29,433,616 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01024,913,784 - 24,920,277 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01025,903,925 - 25,910,298 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1025,903,911 - 25,910,325 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01025,754,109 - 25,760,482 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41025,776,380 - 25,782,754 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11025,777,429 - 25,783,775 (-)NCBI
Celera1024,735,527 - 24,741,900 (-)NCBICelera
RH 3.4 Map10255.21RGD
Cytogenetic Map10q12NCBI
Ccng1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540816,846,050 - 16,850,365 (+)NCBIChiLan1.0ChiLan1.0
CCNG1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1447,800,697 - 47,808,259 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl447,801,575 - 47,808,211 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha447,693,783 - 47,701,354 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0448,231,625 - 48,239,215 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl448,231,625 - 48,238,937 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1448,014,780 - 48,022,368 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0448,173,025 - 48,180,607 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0448,692,928 - 48,700,530 (-)NCBIUU_Cfam_GSD_1.0
Ccng1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213102,164,944 - 102,171,907 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936515614,290 - 619,963 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936515614,287 - 621,213 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCNG1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1660,349,258 - 60,356,738 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11660,349,255 - 60,356,737 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21665,189,603 - 65,197,085 (-)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103244924
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12365,709,759 - 65,716,913 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2365,709,786 - 65,714,711 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660971,066,729 - 1,073,889 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ccng1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473326,367,200 - 26,376,664 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473326,366,448 - 26,378,062 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Ensembl Acc Id: ENSPPAT00000035588   ⟹   ENSPPAP00000012921
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl5165,592,971 - 165,598,728 (+)Ensembl
RefSeq Acc Id: XM_034960923   ⟹   XP_034816814
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24158,610,883 - 158,618,344 (+)NCBI
NHGRI_mPanPan15156,750,429 - 156,757,885 (+)NCBI
Mhudiblu_PPA_v05158,814,563 - 158,822,019 (+)NCBI
RefSeq Acc Id: XR_010112241
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24158,610,583 - 158,618,344 (+)NCBI
RefSeq Acc Id: XR_010112242
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v24158,610,590 - 158,624,484 (+)NCBI
Protein RefSeqs XP_034816814 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000012921.1
RefSeq Acc Id: XP_034816814   ⟸   XM_034960923
Ensembl Acc Id: ENSPPAP00000012921   ⟸   ENSPPAT00000035588
Cyclin-like



1 to 13 of 13 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000029620 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000035588.1 UniProtKB/TrEMBL
Gene3D-CATH Cyclin-like UniProtKB/TrEMBL
InterPro Cyclin UniProtKB/TrEMBL
  Cyclin-like UniProtKB/TrEMBL
  Cyclin-like_sf UniProtKB/TrEMBL
  Cyclin_N UniProtKB/TrEMBL
NCBI Gene CCNG1 ENTREZGENE
PANTHER PTHR10177 UniProtKB/TrEMBL
Pfam Cyclin_N UniProtKB/TrEMBL
SMART CYCLIN UniProtKB/TrEMBL
Superfamily-SCOP SSF47954 UniProtKB/TrEMBL
UniProt A0A2R9ABA6_PANPA UniProtKB/TrEMBL
1 to 13 of 13 rows