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Gene: NFYB (nuclear transcription factor Y subunit beta) Pan paniscus

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Symbol:

NFYB

Name:

nuclear transcription factor Y subunit beta

RGD ID:

11670772

Description:

ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); protein-containing complex binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN altered p53 signaling pathway; FOUND IN CCAAT-binding factor complex (ortholog)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,452 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	112,176,320 - 112,196,849 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	101,693,559 - 101,714,057 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	105,089,028 - 105,108,825 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	105,089,028 - 105,108,825 (-)	Ensembl	panpan1.1		panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to leukemia inhibitory factor (ISO)

positive regulation of DNA-templated transcription (ISO)

positive regulation of transcription by RNA polymerase II (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

Cellular Component

CCAAT-binding factor complex (IEA,ISO)

nucleoplasm (IEA)

nucleus (IEA)

protein-DNA complex (IEA)

RNA polymerase II transcription regulator complex (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription activator activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor activity (ISO)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

DNA-binding transcription factor binding (IEA)

protein binding (ISO)

protein heterodimerization activity (IEA)

protein-containing complex binding (ISO)

RNA polymerase II cis-regulatory region sequence-specific DNA binding (IEA,ISO)

sequence-specific DNA binding (IEA)

transcription cis-regulatory region binding (IEA,ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

altered p53 signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

NFYB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,452 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	112,176,320 - 112,196,849 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	101,693,559 - 101,714,057 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	105,089,028 - 105,108,825 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	12	105,089,028 - 105,108,825 (-)	Ensembl	panpan1.1		panPan2

NFYB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	104,117,086 - 104,138,210 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	104,117,086 - 104,138,241 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	104,510,864 - 104,531,988 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	103,034,988 - 103,056,170 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	12	103,013,324 - 103,034,507	NCBI
Celera	12	104,174,600 - 104,195,782 (-)	NCBI		Celera
Cytogenetic Map	12	q23.3	NCBI
HuRef	12	101,570,544 - 101,591,726 (-)	NCBI		HuRef
CHM1_1	12	104,476,772 - 104,497,954 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	12	104,078,781 - 104,099,908 (-)	NCBI		T2T-CHM13v2.0

Nfyb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	82,584,534 - 82,599,985 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	82,584,535 - 82,599,978 (-)	Ensembl		GRCm39 Ensembl
GRCm38	10	82,748,700 - 82,764,151 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	82,748,701 - 82,764,144 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	82,211,445 - 82,226,886 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	82,178,499 - 82,193,940 (-)	NCBI		MGSCv36	mm8
Celera	10	84,733,247 - 84,748,605 (-)	NCBI		Celera
Cytogenetic Map	10	C1	NCBI
cM Map	10	40.25	NCBI

Nfyb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	7	22,852,543 - 22,868,116 (+)	NCBI		GRCr8
mRatBN7.2	7	20,964,988 - 20,980,569 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	7	20,964,993 - 20,980,565 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	7	22,939,228 - 22,954,797 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	7	25,101,932 - 25,117,500 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	7	24,879,005 - 24,894,574 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	7	27,081,667 - 27,097,481 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	7	27,081,667 - 27,097,479 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	7	27,200,204 - 27,216,018 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	7	23,190,295 - 23,205,611 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	7	23,210,565 - 23,225,880 (+)	NCBI
Celera	7	18,145,883 - 18,161,286 (+)	NCBI		Celera
Cytogenetic Map	7	q13	NCBI

Nfyb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955405	38,771,837 - 38,789,536 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955405	38,773,690 - 38,789,534 (-)	NCBI	ChiLan1.0	ChiLan1.0

NFYB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	42,608,067 - 42,628,816 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	42,609,606 - 42,629,158 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	42,977,178 - 42,998,767 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	43,265,789 - 43,287,387 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	43,264,430 - 43,286,300 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	42,531,537 - 42,553,082 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	42,630,397 - 42,651,973 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	42,901,800 - 42,923,377 (-)	NCBI		UU_Cfam_GSD_1.0

Nfyb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	17,348,997 - 17,368,049 (+)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936492	10,359,387 - 10,377,537 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

NFYB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	80,334,748 - 80,353,768 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	80,333,762 - 80,353,466 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	83,903,195 - 83,922,952 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	5	q2.3	NCBI

NFYB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	99,320,263 - 99,341,289 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	99,319,390 - 99,329,726 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666037	145,655,097 - 145,678,182 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Nfyb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624750	4,600,345 - 4,614,817 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624750	4,600,423 - 4,616,241 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_003832563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_008958001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034934363	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034934364	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034934365	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034934366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034934367	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063593608	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063593609	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_063593610	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSPPAT00000060494 ⟹ ENSPPAP00000037594

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	12	105,089,028 - 105,108,825 (-)	Ensembl

Ensembl Acc Id:

ENSPPAT00000060503 ⟹ ENSPPAP00000037603

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
PanPan1.1 Ensembl	12	105,090,977 - 105,099,913 (-)	Ensembl

RefSeq Acc Id:

XM_003832563 ⟹ XP_003832611

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,243 (-)	NCBI
NHGRI_mPanPan1	12	112,176,320 - 112,196,640 (-)	NCBI
Mhudiblu_PPA_v0	12	101,693,559 - 101,713,332 (-)	NCBI
PanPan1.1	12	105,089,028 - 105,108,825 (-)	NCBI

Sequence:

show sequence

CACCCAGGCACCTGCGTGGGGAGGAAGGCATGGCTTTAGCTTCCCCGCAGCCTGGTTTGCGCGT
AAAGAATGCAGCCATCTGGCGGCTTGCGGTCCCTGGACTTGCCCCGAAGGTTGAAATCACAAAG
ATTAGACACCTTTTTAGATAGGTGTTCTTCAGCACCACTGACAACACGGTTCTGACAGTATTTC
ATGACAATGGATGGTGACAGTTCTACAACAGATGCTTCTCAACTAGGAATCTCTGCAGACTATA
TTGGAGGAAGTCATTATGTTATACAGCCTCATGATGATACTGAGGACAGCATGAATGATCATGA
AGACACAAATGGTTCAAAAGAAAGTTTCAGAGAACAAGATATATATCTTCCAATAGCAAACGTG
GCTAGGATAATGAAAAATGCCATACCTCAAACGGGAAAGATTGCAAAAGATGCCAAAGAATGTG
TTCAAGAATGTGTAAGTGAGTTCATCAGTTTTATAACATCTGAAGCAAGTGAAAGGTGCCATCA
AGAGAAACGGAAAACAATCAATGGAGAAGATATTCTCTTTGCTATGTCTACTTTAGGCTTTGAC
AGTTATGTGGAACCTCTGAAATTATACCTTCAGAAATTCAGAGAGGCTATGAAAGGAGAAAAGG
GAATTGGTGGAGCAGTCACAGCTACAGATGGACTAAGTGAAGAGCTTACAGAGGAGGCATTTAC
TAACCAGTTACCAGCTGGCTTAATAACCACAGACGGTCAACAACAAAATGTTATGGTTTACACA
ACATCATATCAACAGATTTCTGGTGTTCAGCAAATTCAGTTTTCATGATCTGAAGAAATGATGG
AATGGGGAGTGTAGAGAAATGAGAGTCTGTATGATTCTGGAACAGAGACATCAGAAGGAAAGAC
TGGTGAAAAGATGTATCTTTGTATATTAATAGCTGTAATGTAGCTTCCTGATGCTTGACTAATT
GAGGTGTTAATTCTGACTTGAGAATCTTTTTCATGAATGATTTTAAAGAAAAATTTGGATTTTA
AAGGTATTAAAATATTTTTGTTTTGTACGAGAGTTTGTTGCTCTGTATGACTCCTGTATGCATT
GTATATTGCAATTTATTACTGTCAGAGATTTGTAGACAGTTTCTTATTTTCATATTGAATCATG
TTACTTTTGTAATTCAAGTAAGCAGCTGGGTTAATTCATGATGTTTGCCCTTTTAATAAAATAT
AAGGGTAGAGTTCATTTTGAATGCAAGTTGCCTTTATTATAAATTTGAGTTTGTCTTGGTTATA
CCTTGCATGATAACCTAGCTAGATTTCTAGCATTTGCTGTATTTATTAAAATTATTATTTTTTT
GGTAAAACATTAATAGTTTAAGCAGCATCATTTTTTTAAAAAATGTAATTGAATAAGTGTGAAT
GCAGAAGCAAATATTGTCTGCCCTGTTAAACTTGGTGCCCATTAACAGTGTTTACACTGTTCAT
CGTGCCTGTTAATGTAGTTTTAGTTATTGGAGCTTTTTTAAGACTAGATTTGGTTTTGAGTTAC
ATTTTTAAGAATGTGGGAATACATTTAAGTTTAATGTAGTCCTAGTGCTCTTGAAATGGTGCCC
CTTTCATTTGGTACATGATTTTTTTTCAAATCATATCTTCAAGTACTTTAGTATCCTCTTACAG
AAGAGGAGTTTTATAGTCTGATGGTAAATGTCTTCGTTTTACCTTTTTAATTGAAATGTCAAGT
TTCCTATTACACTATGGAAACCAAGAAACATCAGACATCATTGCGTGTACAGACCTTTTGCATG
GGTGAGTGAATGAAATGGAGAACAGAGTGAGTGCTGTGAACGGTGTGAAATAGAAGCCAACTTC
TAGTATGCTGTCTTCATCTCTGCAATAATCTAAACGTAAATAATGTAACTTTGTATAATTTAGT
AGTATGTACTTGGATTGTTTCTTTTTGAAAAGTGAGGATTTGTATTTTCTCATCTATTCTTTTT
GGTGTTAATTAACTTGAGGGATTTCTTTTTTAAGTTTTTAAATATCAAAAATTGCTATTGTATA
GTTTGCCTAAAAGGAAGTTGGAGTGAATATCATCTTTGAAGGACACTCAAATTTATAAGGTAGA
AGCAATTTCCCAGATATAGGCTGAACAGAAACATTTACTTTGCCAGAAGGAGCCTTTAGGAGTA
TATGTGGGCTAATCAGAGGTTAATAATGTCCTCATCTCCTACTCTCCATTTAAAAAACAAACTT
CATTGTAGTAAATTCAAATAGGAAAAAATGGGGGAGTAGTTAAGCAAAATCAACAATCATCCTA
CTATGTTGAAAGAACCAATGTTAATATTTTGATAAATATCATTTGTCCTTTTACTTTGCTAAAT
ATGTGTATTTTTATAAAAATGGGCTCATATTGTGCATACCGTTTTGTAACCTGCTTTTTTCACT
TAACAATATATTGGGAACATCTTTTCCAGGTCATGCATAGTCTTCTGCATCATTTTTATTGGTT
TATTATTCTGCTGTATGACTCAGTCATAATTTATTTAATCTTCTATTGGATATTTTGACTATTT
ACATCTTTTCACAGTTATAAACAGCACTTCACTGAATCCCATGTACATCCATGACTGTTTTCTT
AAATTCTTAGAATTGCTGGGTTACCAAATATGCAAAATTTTAAGGCTTTTGATACTTCGTTATG
AGTGTATTTTTGAGATATTTTCCACTTGATCCAAGCAGTGTGTCACTATATAACTGATAAAAGC
ACTTGGTCTTTGA

hide sequence

RefSeq Acc Id:

XM_008958001 ⟹ XP_008956249

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,243 (-)	NCBI
NHGRI_mPanPan1	12	112,176,320 - 112,196,640 (-)	NCBI
Mhudiblu_PPA_v0	12	101,693,559 - 101,713,332 (-)	NCBI
PanPan1.1	12	105,089,028 - 105,108,825 (-)	NCBI

Sequence:

show sequence

CACCCAGGCACCTGCGTGGGGAGGAAGGCATGGCTTTAGCTTCCCCGCAGCCTGGTTTGCGCGT
AAAGAATGCAGCCATCTGGCGGCTTGCGGTCCCTGGACTTGCCCCGAAGGTGGGAAGGAAGCCC
TTCGGATTGGACTAAGGTTGAAATCACAAAGATTAGACACCTTTTTAGATAGGTGTTCTTCAGC
ACCACTGACAACACGGTTCTGACAGTATTTCATGACAATGGATGGTGACAGTTCTACAACAGAT
GCTTCTCAACTAGGAATCTCTGCAGACTATATTGGAGGAAGTCATTATGTTATACAGCCTCATG
ATGATACTGAGGACAGCATGAATGATCATGAAGACACAAATGGTTCAAAAGAAAGTTTCAGAGA
ACAAGATATATATCTTCCAATAGCAAACGTGGCTAGGATAATGAAAAATGCCATACCTCAAACG
GGAAAGATTGCAAAAGATGCCAAAGAATGTGTTCAAGAATGTGTAAGTGAGTTCATCAGTTTTA
TAACATCTGAAGCAAGTGAAAGGTGCCATCAAGAGAAACGGAAAACAATCAATGGAGAAGATAT
TCTCTTTGCTATGTCTACTTTAGGCTTTGACAGTTATGTGGAACCTCTGAAATTATACCTTCAG
AAATTCAGAGAGGCTATGAAAGGAGAAAAGGGAATTGGTGGAGCAGTCACAGCTACAGATGGAC
TAAGTGAAGAGCTTACAGAGGAGGCATTTACTAACCAGTTACCAGCTGGCTTAATAACCACAGA
CGGTCAACAACAAAATGTTATGGTTTACACAACATCATATCAACAGATTTCTGGTGTTCAGCAA
ATTCAGTTTTCATGATCTGAAGAAATGATGGAATGGGGAGTGTAGAGAAATGAGAGTCTGTATG
ATTCTGGAACAGAGACATCAGAAGGAAAGACTGGTGAAAAGATGTATCTTTGTATATTAATAGC
TGTAATGTAGCTTCCTGATGCTTGACTAATTGAGGTGTTAATTCTGACTTGAGAATCTTTTTCA
TGAATGATTTTAAAGAAAAATTTGGATTTTAAAGGTATTAAAATATTTTTGTTTTGTACGAGAG
TTTGTTGCTCTGTATGACTCCTGTATGCATTGTATATTGCAATTTATTACTGTCAGAGATTTGT
AGACAGTTTCTTATTTTCATATTGAATCATGTTACTTTTGTAATTCAAGTAAGCAGCTGGGTTA
ATTCATGATGTTTGCCCTTTTAATAAAATATAAGGGTAGAGTTCATTTTGAATGCAAGTTGCCT
TTATTATAAATTTGAGTTTGTCTTGGTTATACCTTGCATGATAACCTAGCTAGATTTCTAGCAT
TTGCTGTATTTATTAAAATTATTATTTTTTTGGTAAAACATTAATAGTTTAAGCAGCATCATTT
TTTTAAAAAATGTAATTGAATAAGTGTGAATGCAGAAGCAAATATTGTCTGCCCTGTTAAACTT
GGTGCCCATTAACAGTGTTTACACTGTTCATCGTGCCTGTTAATGTAGTTTTAGTTATTGGAGC
TTTTTTAAGACTAGATTTGGTTTTGAGTTACATTTTTAAGAATGTGGGAATACATTTAAGTTTA
ATGTAGTCCTAGTGCTCTTGAAATGGTGCCCCTTTCATTTGGTACATGATTTTTTTTCAAATCA
TATCTTCAAGTACTTTAGTATCCTCTTACAGAAGAGGAGTTTTATAGTCTGATGGTAAATGTCT
TCGTTTTACCTTTTTAATTGAAATGTCAAGTTTCCTATTACACTATGGAAACCAAGAAACATCA
GACATCATTGCGTGTACAGACCTTTTGCATGGGTGAGTGAATGAAATGGAGAACAGAGTGAGTG
CTGTGAACGGTGTGAAATAGAAGCCAACTTCTAGTATGCTGTCTTCATCTCTGCAATAATCTAA
ACGTAAATAATGTAACTTTGTATAATTTAGTAGTATGTACTTGGATTGTTTCTTTTTGAAAAGT
GAGGATTTGTATTTTCTCATCTATTCTTTTTGGTGTTAATTAACTTGAGGGATTTCTTTTTTAA
GTTTTTAAATATCAAAAATTGCTATTGTATAGTTTGCCTAAAAGGAAGTTGGAGTGAATATCAT
CTTTGAAGGACACTCAAATTTATAAGGTAGAAGCAATTTCCCAGATATAGGCTGAACAGAAACA
TTTACTTTGCCAGAAGGAGCCTTTAGGAGTATATGTGGGCTAATCAGAGGTTAATAATGTCCTC
ATCTCCTACTCTCCATTTAAAAAACAAACTTCATTGTAGTAAATTCAAATAGGAAAAAATGGGG
GAGTAGTTAAGCAAAATCAACAATCATCCTACTATGTTGAAAGAACCAATGTTAATATTTTGAT
AAATATCATTTGTCCTTTTACTTTGCTAAATATGTGTATTTTTATAAAAATGGGCTCATATTGT
GCATACCGTTTTGTAACCTGCTTTTTTCACTTAACAATATATTGGGAACATCTTTTCCAGGTCA
TGCATAGTCTTCTGCATCATTTTTATTGGTTTATTATTCTGCTGTATGACTCAGTCATAATTTA
TTTAATCTTCTATTGGATATTTTGACTATTTACATCTTTTCACAGTTATAAACAGCACTTCACT
GAATCCCATGTACATCCATGACTGTTTTCTTAAATTCTTAGAATTGCTGGGTTACCAAATATGC
AAAATTTTAAGGCTTTTGATACTTCGTTATGAGTGTATTTTTGAGATATTTTCCACTTGATCCA
AGCAGTGTGTCACTATATAACTGATAAAAGCACTTGGTCTTTGA

hide sequence

RefSeq Acc Id:

XM_034934366 ⟹ XP_034790257

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,452 (-)	NCBI
NHGRI_mPanPan1	12	112,176,320 - 112,196,849 (-)	NCBI
Mhudiblu_PPA_v0	12	101,693,559 - 101,714,057 (-)	NCBI

RefSeq Acc Id:

XM_034934367 ⟹ XP_034790258

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,427 (-)	NCBI
NHGRI_mPanPan1	12	112,176,320 - 112,196,824 (-)	NCBI
Mhudiblu_PPA_v0	12	101,693,559 - 101,714,055 (-)	NCBI

RefSeq Acc Id:

XM_063593608 ⟹ XP_063449678

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,199,848 (-)	NCBI

RefSeq Acc Id:

XM_063593609 ⟹ XP_063449679

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,200,429 (-)	NCBI

RefSeq Acc Id:

XM_063593610 ⟹ XP_063449680

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	112,179,923 - 112,199,848 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_003832611	(Get FASTA)	NCBI Sequence Viewer
	XP_008956249	(Get FASTA)	NCBI Sequence Viewer
	XP_034790257	(Get FASTA)	NCBI Sequence Viewer
	XP_034790258	(Get FASTA)	NCBI Sequence Viewer
	XP_063449678	(Get FASTA)	NCBI Sequence Viewer
	XP_063449679	(Get FASTA)	NCBI Sequence Viewer
	XP_063449680	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000037594.1
	ENSPPAP00000037603.1

RefSeq Acc Id:	XP_003832611 ⟸ XM_003832563
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C725 (UniProtKB/TrEMBL), A0A2R9C9I2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTMDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANV ARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFD SYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELTEEAFTNQLPAGLITTDGQQQNVMVYT TSYQQISGVQQIQFS hide sequence

RefSeq Acc Id:	XP_008956249 ⟸ XM_008958001
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C725 (UniProtKB/TrEMBL), A0A2R9C9I2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MTMDGDSSTTDASQLGISADYIGGSHYVIQPHDDTEDSMNDHEDTNGSKESFREQDIYLPIANV ARIMKNAIPQTGKIAKDAKECVQECVSEFISFITSEASERCHQEKRKTINGEDILFAMSTLGFD SYVEPLKLYLQKFREAMKGEKGIGGAVTATDGLSEELTEEAFTNQLPAGLITTDGQQQNVMVYT TSYQQISGVQQIQFS hide sequence

RefSeq Acc Id:	XP_034790257 ⟸ XM_034934366
- Peptide Label:	isoform X2
- UniProtKB:	A0A2R9C725 (UniProtKB/TrEMBL), A0A2R9C9I2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_034790258 ⟸ XM_034934367
- Peptide Label:	isoform X3
- UniProtKB:	A0A2R9C9I2 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSPPAP00000037594 ⟸ ENSPPAT00000060494

Ensembl Acc Id:

ENSPPAP00000037603 ⟸ ENSPPAT00000060503

RefSeq Acc Id:	XP_063449679 ⟸ XM_063593609
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9C9I2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063449678 ⟸ XM_063593608
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9C9I2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_063449680 ⟸ XM_063593610
- Peptide Label:	isoform X1
- UniProtKB:	A0A2R9C9I2 (UniProtKB/TrEMBL)

Protein Domains

Transcription factor CBF/NF-Y/archaeal histone

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000041525	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000060494.1	UniProtKB/TrEMBL
	ENSPPAT00000060503.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.20.10	UniProtKB/TrEMBL
InterPro	CBFA_NFYB_domain	UniProtKB/TrEMBL
	Histone-fold	UniProtKB/TrEMBL
	Transc_fact_NFYB/HAP3	UniProtKB/TrEMBL
	Transcrpt_fac_NFYB/HAP3_CS	UniProtKB/TrEMBL
KEGG Report	pps:100979136	UniProtKB/TrEMBL
NCBI Gene	NFYB	ENTREZGENE
PANTHER	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA	UniProtKB/TrEMBL
	PTHR11064	UniProtKB/TrEMBL
Pfam	CBFD_NFYB_HMF	UniProtKB/TrEMBL
PRINTS	CCAATSUBUNTA	UniProtKB/TrEMBL
PROSITE	NFYB_HAP3	UniProtKB/TrEMBL
Superfamily-SCOP	SSF47113	UniProtKB/TrEMBL
UniProt	A0A2R9C725	ENTREZGENE, UniProtKB/TrEMBL
	A0A2R9C9I2	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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RGD Manual Annotations