EIF3E (eukaryotic translation initiation factor 3 subunit E) - Rat Genome Database
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Gene: EIF3E (eukaryotic translation initiation factor 3 subunit E) Pan paniscus
Analyze
Symbol: EIF3E
Name: eukaryotic translation initiation factor 3 subunit E
RGD ID: 11991193
Description: ENCODES a protein that exhibits ion channel binding (ortholog); protein N-terminus binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cellular calcium ion homeostasis (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of intracellular protein transport (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Brain Injuries (ortholog); intermittent claudication (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.18106,996,244 - 107,043,318 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v08104,848,222 - 104,895,349 (-)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
EIF3E
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.18106,996,244 - 107,043,318 (-)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v08104,848,222 - 104,895,349 (-)NCBIMhudiblu_PPA_v0panPan3
EIF3E
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl8108,162,787 - 108,443,496 (-)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl8108,201,216 - 108,435,333 (-)EnsemblGRCh38hg38GRCh38
GRCh388108,201,216 - 108,248,734 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh378109,213,972 - 109,260,959 (-)NCBIGRCh37GRCh37hg19GRCh37
GRCh378109,213,445 - 109,260,946 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368109,283,148 - 109,330,135 (-)NCBINCBI36hg18NCBI36
Build 348109,283,148 - 109,330,128NCBI
Celera8105,401,123 - 105,448,104 (-)NCBI
Cytogenetic Map8q23.1NCBI
HuRef8104,535,352 - 104,582,408 (-)NCBIHuRef
CHM1_18109,254,211 - 109,301,195 (-)NCBICHM1_1
Eif3e
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391543,113,436 - 43,146,132 (-)NCBIGRCm39mm39
GRCm381543,250,040 - 43,282,736 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1543,250,058 - 43,282,719 (-)EnsemblGRCm38mm10GRCm38
MGSCv371543,081,586 - 43,114,282 (-)NCBIGRCm37mm9NCBIm37
MGSCv361543,080,127 - 43,112,771 (-)NCBImm8
Celera1543,733,344 - 43,766,034 (-)NCBICelera
Cytogenetic Map15B3.2NCBI
cM Map1516.73NCBI
Eif3e
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2775,257,366 - 75,265,601 (-)NCBI
Rnor_6.0782,997,694 - 83,037,231 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
RGSC_v3.4779,956,638 - 79,975,212 (-)NCBIRGSC3.4rn4RGSC3.4
Cytogenetic Map7q31NCBI
Eif3e
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541730,822,027 - 30,858,975 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541730,823,555 - 30,858,975 (-)NCBIChiLan1.0ChiLan1.0
EIF3E
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl138,834,821 - 8,887,760 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1138,834,724 - 8,887,818 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Eif3e
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647036,556,666 - 36,599,075 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EIF3E
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl429,289,327 - 29,352,902 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1429,288,878 - 29,343,593 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2431,681,789 - 31,731,604 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EIF3E
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18102,915,111 - 102,960,669 (-)NCBI
ChlSab1.1 Ensembl8102,915,252 - 102,960,559 (-)Ensembl
Eif3e
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476323,256,617 - 23,294,346 (-)NCBI


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_008975225   ⟹   XP_008973473
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.18106,996,244 - 107,043,318 (-)NCBI
Mhudiblu_PPA_v08104,848,222 - 104,895,349 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014345983   ⟹   XP_014201469
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.18106,996,244 - 107,038,017 (-)NCBI
Mhudiblu_PPA_v08104,848,222 - 104,890,041 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008973473 (Get FASTA)   NCBI Sequence Viewer  
  XP_014201469 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008973473   ⟸   XM_008975225
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_014201469   ⟸   XM_014345983
- Peptide Label: isoform X2
- Sequence:


Additional Information

Database Acc Id Source(s)
NCBI Gene EIF3E ENTREZGENE