PTPA (protein phosphatase 2 phosphatase activator) - Rat Genome Database

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Gene: PTPA (protein phosphatase 2 phosphatase activator) Pan paniscus
Analyze
Symbol: PTPA
Name: protein phosphatase 2 phosphatase activator
RGD ID: 11740774
Description: ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); INVOLVED IN negative regulation of phosphoprotein phosphatase activity (inferred); negative regulation of protein dephosphorylation (inferred); positive regulation of apoptotic process (inferred); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN ATPase complex (inferred); calcium channel complex (inferred); cytoplasm (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: serine/threonine-protein phosphatase 2A activator
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19128,896,584 - 128,934,651 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,896,584 - 128,934,651 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v09100,236,607 - 100,274,273 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Genomics

Comparative Map Data
PTPA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.19128,896,584 - 128,934,651 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9128,896,584 - 128,934,651 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v09100,236,607 - 100,274,273 (+)NCBIMhudiblu_PPA_v0panPan3
PTPA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389129,110,950 - 129,148,946 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl9129,110,950 - 129,148,946 (+)EnsemblGRCh38hg38GRCh38
GRCh379131,873,229 - 131,911,225 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369130,913,065 - 130,951,044 (+)NCBINCBI36hg18NCBI36
Build 349128,953,166 - 128,990,777NCBI
Celera9102,525,511 - 102,563,513 (+)NCBI
Cytogenetic Map9q34.11NCBI
HuRef9101,480,193 - 101,518,132 (+)NCBIHuRef
CHM1_19132,024,045 - 132,062,045 (+)NCBICHM1_1
T2T-CHM13v2.09141,314,397 - 141,352,390 (+)NCBI
Ptpa
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39230,306,062 - 30,337,819 (+)NCBIGRCm39mm39
GRCm39 Ensembl230,306,051 - 30,337,818 (+)Ensembl
GRCm38230,416,050 - 30,447,807 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl230,416,039 - 30,447,806 (+)EnsemblGRCm38mm10GRCm38
MGSCv37230,271,570 - 30,303,327 (+)NCBIGRCm37mm9NCBIm37
MGSCv36230,238,059 - 30,269,813 (+)NCBImm8
Celera230,120,848 - 30,152,502 (+)NCBICelera
Cytogenetic Map2BNCBI
cM Map221.71NCBI
Ptpa
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2313,689,742 - 13,720,287 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl313,689,741 - 13,722,549 (+)Ensembl
Rnor_6.038,982,122 - 9,012,585 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl38,982,122 - 9,012,585 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0314,334,896 - 14,365,358 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.439,461,718 - 9,492,181 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.139,472,909 - 9,491,620 (+)NCBI
Celera38,456,362 - 8,486,834 (+)NCBICelera
Cytogenetic Map3p12NCBI
Ptpa
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555701,429,316 - 1,455,562 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555701,429,316 - 1,454,820 (+)NCBIChiLan1.0ChiLan1.0
PTPA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1954,535,186 - 54,568,632 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl954,536,180 - 54,566,235 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha953,730,775 - 53,764,220 (-)NCBI
ROS_Cfam_1.0955,430,817 - 55,464,245 (-)NCBI
ROS_Cfam_1.0 Ensembl955,426,235 - 55,461,851 (-)Ensembl
UMICH_Zoey_3.1954,217,697 - 54,250,902 (-)NCBI
UNSW_CanFamBas_1.0954,529,536 - 54,562,790 (-)NCBI
UU_Cfam_GSD_1.0954,623,019 - 54,656,500 (-)NCBI
Ptpa
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947196,768,400 - 196,795,560 (+)NCBI
SpeTri2.0NW_00493648716,536,740 - 16,564,087 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTPA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1269,401,789 - 269,431,463 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11269,401,776 - 269,431,465 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21303,417,989 - 303,447,667 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PTPA
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1129,017,533 - 9,056,856 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl129,019,024 - 9,056,703 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666096506,991 - 549,730 (+)NCBIVero_WHO_p1.0
Ptpa
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247605,974,881 - 6,001,979 (-)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247605,974,881 - 6,001,975 (-)NCBIHetGla_female_1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSPPAT00000059024   ⟹   ENSPPAP00000036133
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,896,584 - 128,934,651 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059028   ⟹   ENSPPAP00000036137
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,897,029 - 128,934,651 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059038   ⟹   ENSPPAP00000036147
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,897,316 - 128,933,169 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059041   ⟹   ENSPPAP00000036150
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,897,316 - 128,933,169 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059043   ⟹   ENSPPAP00000036152
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,897,316 - 128,933,169 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059052   ⟹   ENSPPAP00000036161
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,904,434 - 128,933,169 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059055   ⟹   ENSPPAP00000036164
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,928,235 - 128,929,182 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000059060   ⟹   ENSPPAP00000036169
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl9128,928,235 - 128,928,596 (+)Ensembl
RefSeq Acc Id: XM_008975914   ⟹   XP_008974162
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.19128,897,029 - 128,934,651 (+)NCBI
Mhudiblu_PPA_v09100,236,607 - 100,274,273 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014346307   ⟹   XP_014201793
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.19128,897,035 - 128,930,329 (+)NCBI
Mhudiblu_PPA_v09100,236,614 - 100,268,219 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034929254   ⟹   XP_034785145
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v09100,236,615 - 100,268,219 (+)NCBI
RefSeq Acc Id: XM_034929255   ⟹   XP_034785146
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v09100,236,623 - 100,274,273 (+)NCBI
Protein Sequences
Protein RefSeqs XP_008974162 (Get FASTA)   NCBI Sequence Viewer  
  XP_014201793 (Get FASTA)   NCBI Sequence Viewer  
  XP_034785145 (Get FASTA)   NCBI Sequence Viewer  
  XP_034785146 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: XP_008974162   ⟸   XM_008975914
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_014201793   ⟸   XM_014346307
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_034785145   ⟸   XM_034929254
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034785146   ⟸   XM_034929255
- Peptide Label: isoform X3
RefSeq Acc Id: ENSPPAP00000036164   ⟸   ENSPPAT00000059055
RefSeq Acc Id: ENSPPAP00000036161   ⟸   ENSPPAT00000059052
RefSeq Acc Id: ENSPPAP00000036169   ⟸   ENSPPAT00000059060
RefSeq Acc Id: ENSPPAP00000036133   ⟸   ENSPPAT00000059024
RefSeq Acc Id: ENSPPAP00000036137   ⟸   ENSPPAT00000059028
RefSeq Acc Id: ENSPPAP00000036147   ⟸   ENSPPAT00000059038
RefSeq Acc Id: ENSPPAP00000036152   ⟸   ENSPPAT00000059043
RefSeq Acc Id: ENSPPAP00000036150   ⟸   ENSPPAT00000059041


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000040780 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000036133 UniProtKB/TrEMBL
  ENSPPAP00000036137 UniProtKB/TrEMBL
  ENSPPAP00000036147 UniProtKB/TrEMBL
  ENSPPAP00000036150 UniProtKB/TrEMBL
  ENSPPAP00000036152 UniProtKB/TrEMBL
  ENSPPAP00000036161 UniProtKB/TrEMBL
  ENSPPAP00000036164 UniProtKB/TrEMBL
  ENSPPAP00000036169 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000059024 UniProtKB/TrEMBL
  ENSPPAT00000059028 UniProtKB/TrEMBL
  ENSPPAT00000059038 UniProtKB/TrEMBL
  ENSPPAT00000059041 UniProtKB/TrEMBL
  ENSPPAT00000059043 UniProtKB/TrEMBL
  ENSPPAT00000059052 UniProtKB/TrEMBL
  ENSPPAT00000059055 UniProtKB/TrEMBL
  ENSPPAT00000059060 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1150 UniProtKB/TrEMBL
InterPro Phstyr_phstse_ac UniProtKB/TrEMBL
  PTPA_C_lid UniProtKB/TrEMBL
  PTPA_sf UniProtKB/TrEMBL
NCBI Gene PTPA ENTREZGENE
PANTHER PTHR10012 UniProtKB/TrEMBL
Pfam PTPA UniProtKB/TrEMBL
PIRSF Phstyr_phstse_ac UniProtKB/TrEMBL
Superfamily-SCOP SSF140984 UniProtKB/TrEMBL
UniProt A0A2R9C2J4_PANPA UniProtKB/TrEMBL
  A0A2R9C2K0_PANPA UniProtKB/TrEMBL
  A0A2R9C312_PANPA UniProtKB/TrEMBL
  A0A2R9C316_PANPA UniProtKB/TrEMBL
  A0A2R9C5G7_PANPA UniProtKB/TrEMBL
  A0A2R9CCS9_PANPA UniProtKB/TrEMBL
  A0A2R9CCT9_PANPA UniProtKB/TrEMBL
  A0A2R9CCU4_PANPA UniProtKB/TrEMBL