Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

ONTOLOGY REPORT - ANNOTATIONS

Term:axon guidance
go back to main search page
Accession:GO:0007411 term browser browse the term
Definition:The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
Synonyms:exact_synonym: axon pathfinding
 narrow_synonym: axon growth cone guidance
 related_synonym: axon chemotaxis
 alt_id: GO:0008040
 xref: Wikipedia:Axon_guidance


show annotations for term's descendants           Sort by:
axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ABLIM1 actin binding LIM protein 1 acts_upstream_of_or_within ISO (PMID:11163266) MGI PMID:11163266 NCBI chr28:25,260,323...25,543,369
Ensembl chr28:25,260,873...25,545,304 		JBrowse link
G ALCAM activated leukocyte cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15345243) Ensembl
MGI		 PMID:15345243 GO_REF:0000107 NCBI chr33:10,983,363...11,195,170
Ensembl chr33:10,983,363...11,370,085 		JBrowse link
G ANK3 ankyrin 3 acts_upstream_of_or_within ISO (PMID:15479642) MGI PMID:15479642 NCBI chr 4:12,166,275...12,827,175
Ensembl chr 4:12,167,550...12,827,037 		JBrowse link
G APBB1 amyloid beta precursor protein binding family B member 1 acts_upstream_of_or_within ISO (PMID:16407979) MGI PMID:16407979 NCBI chr21:29,719,386...29,741,658
Ensembl chr21:29,719,589...29,759,046 		JBrowse link
G APBB2 amyloid beta precursor protein binding family B member 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16407979) Ensembl
MGI		 PMID:16407979 GO_REF:0000107 NCBI chr 3:71,454,814...71,830,482
Ensembl chr 3:71,454,585...71,826,749 		JBrowse link
G ARHGAP35 Rho GTPase activating protein 35 involved_in ISS
IEA		 UniProt
Ensembl		 GO_REF:0000024 GO_REF:0000107 NCBI chr 1:108,952,836...109,034,329
Ensembl chr 1:108,952,562...109,034,337 		JBrowse link
G ARTN artemin acts_upstream_of_or_within ISO (PMID:12160745) MGI PMID:12160745
G ARX aristaless related homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15677725)
(PMID:17460091)		 Ensembl
MGI		 PMID:15677725 PMID:17460091 GO_REF:0000107 NCBI chr  X:20,545,346...20,556,206
Ensembl chr  X:20,545,346...20,556,206 		JBrowse link
G ATOH1 atonal bHLH transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16145671) Ensembl
MGI		 PMID:16145671 GO_REF:0000107 NCBI chr32:16,807,217...16,809,294
Ensembl chr32:16,807,336...16,808,406 		JBrowse link
G B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15728829), (PMID:23006775) Ensembl
MGI		 PMID:15728829 PMID:23006775 GO_REF:0000107 NCBI chr10:62,170,262...62,239,010
Ensembl chr10:62,145,117...62,146,310
Ensembl chr10:62,145,117...62,146,310 		JBrowse link
G B4GAT1 beta-1,4-glucuronyltransferase 1 acts_upstream_of_or_within ISO (PMID:23217742) MGI PMID:23217742 NCBI chr18:50,964,645...50,966,924
Ensembl chr18:50,964,131...50,966,264 		JBrowse link
G BDNF brain derived neurotrophic factor acts_upstream_of_or_within ISO (PMID:15014133) MGI PMID:15014133 NCBI chr21:48,191,580...48,243,699
Ensembl chr21:48,192,670...48,204,480 		JBrowse link
G BMP7 bone morphogenetic protein 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12741987) Ensembl
MGI		 PMID:12741987 GO_REF:0000107 NCBI chr24:42,203,183...42,294,105
Ensembl chr24:42,204,823...42,294,653 		JBrowse link
G BOC BOC cell adhesion associated, oncogene regulated acts_upstream_of_or_within ISO (PMID:17086203) MGI PMID:17086203 NCBI chr33:17,508,046...17,629,705
Ensembl chr33:17,556,910...17,630,259 		JBrowse link
G CDH4 cadherin 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14586016) Ensembl
MGI		 PMID:14586016 GO_REF:0000107 NCBI chr24:45,749,589...46,063,960
Ensembl chr24:45,782,133...46,064,028 		JBrowse link
G CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:40,481,111...40,502,689
Ensembl chr 9:40,501,646...40,502,569 		JBrowse link
G CHL1 cell adhesion molecule L1 like involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12391163) Ensembl
MGI		 PMID:12391163 GO_REF:0000107 NCBI chr20:16,789,697...17,065,861
Ensembl chr20:16,792,960...16,984,613 		JBrowse link
G CNTN2 contactin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18550718) MGI
Ensembl		 PMID:18550718 GO_REF:0000107 NCBI chr38:1,570,598...1,600,524
Ensembl chr38:1,576,898...1,596,621 		JBrowse link
G CRPPA CDP-L-ribitol pyrophosphorylase A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23217742) Ensembl
MGI		 PMID:23217742 GO_REF:0000107 NCBI chr14:30,697,060...30,989,423
Ensembl chr14:30,648,128...30,989,604 		JBrowse link
G CSF1R colony stimulating factor 1 receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:58,980,699...59,010,683
Ensembl chr 4:58,980,788...59,010,510 		JBrowse link
G DAG1 dystroglycan 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G DCC DCC netrin 1 receptor ISO RGD PMID:8861902 RGD:729062 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17804636) Ensembl
MGI		 PMID:17804636 GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G DRAXIN dorsal inhibitory axon guidance protein involved_in IEA InterPro
Ensembl
UniProt		 GO_REF:0000002 GO_REF:0000104 GO_REF:0000107 NCBI chr 2:84,515,881...84,525,797
Ensembl chr 2:84,515,811...84,526,387 		JBrowse link
G DRGX dorsal root ganglia homeobox involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12917357) Ensembl
MGI		 PMID:12917357 GO_REF:0000107 NCBI chr28:1,281,868...1,316,624
Ensembl chr28:1,281,864...1,314,932 		JBrowse link
G DSCAM DS cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:34,666,300...35,277,651
Ensembl chr31:34,669,424...35,400,160 		JBrowse link
G DVL1 dishevelled segment polarity protein 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr 5:56,507,803...56,519,382
Ensembl chr 5:56,507,739...56,519,491 		JBrowse link
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,732,645...77,793,950
Ensembl chr 2:77,678,686...77,792,114 		JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EDN3 endothelin 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr24:44,024,553...44,054,727
Ensembl chr24:44,033,419...44,054,050 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463 		JBrowse link
G EFNA2 ephrin A2 ISO RGD PMID:17328773 RGD:2301727
G EFNA5 ephrin A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9614241)
(PMID:11222144)		 Ensembl
MGI		 PMID:9614241 PMID:11222144 GO_REF:0000107 NCBI chr 3:4,272,138...4,546,527
Ensembl chr 3:4,272,518...4,542,049 		JBrowse link
G EFNB1 ephrin B1 acts_upstream_of_or_within ISO (PMID:11731465) MGI PMID:11731465 NCBI chr  X:53,292,407...53,303,824
Ensembl chr  X:53,292,565...53,304,600 		JBrowse link
G EFNB3 ephrin B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11731465)
(PMID:12649481)		 Ensembl
MGI		 PMID:11731465 PMID:12649481 GO_REF:0000107 NCBI chr 5:32,588,062...32,592,390
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
G ENAH ENAH actin regulator acts_upstream_of_or_within ISO (PMID:15371503)
(PMID:10069337), (PMID:15371503)		 MGI PMID:10069337 PMID:15371503 NCBI chr 7:39,105,024...39,250,126
Ensembl chr 7:39,105,039...39,247,595 		JBrowse link
G EPHA4 EPH receptor A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23144223)
(PMID:12649481)		 Ensembl
MGI		 PMID:12649481 PMID:23144223 GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646 		JBrowse link
G EPHA5 EPH receptor A5 involved_in ISO (PMID:12124402) UniProt PMID:12124402 NCBI chr13:56,054,247...56,402,583
Ensembl chr13:56,058,800...56,383,301 		JBrowse link
G EPHA8 EPH receptor A8 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,703,538...76,739,327
Ensembl chr 2:76,703,524...76,739,259 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24997765)
(PMID:12971893)
(PMID:16701205)
(PMID:11532925)		 Ensembl
MGI		 PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765 GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11532925) Ensembl
MGI		 PMID:11532925 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EPHB3 EPH receptor B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11532925) Ensembl
MGI		 PMID:11532925 GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954 		JBrowse link
G ETV1 ETS variant transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10850491) Ensembl
MGI		 PMID:10850491 GO_REF:0000107 NCBI chr14:28,665,264...28,760,919
Ensembl chr14:28,669,697...28,760,887 		JBrowse link
G EXT1 exostosin glycosyltransferase 1 involved_in
acts_upstream_of_or_within
acts_upstream_of_or_within_positive_effect		 IEA
ISO		 (PMID:14605369)
(PMID:21743013)		 Ensembl
MGI		 PMID:14605369 PMID:21743013 GO_REF:0000107 NCBI chr13:17,172,497...17,457,084
Ensembl chr13:17,172,705...17,456,469 		JBrowse link
G FEZF1 FEZ family zinc finger 1 acts_upstream_of_or_within ISO (PMID:16540508) MGI PMID:16540508
G FLRT2 fibronectin leucine rich transmembrane protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21673655) Ensembl
MGI		 PMID:21673655 GO_REF:0000107 NCBI chr 8:57,234,748...57,334,598
Ensembl chr 8:57,326,238...57,328,220 		JBrowse link
G FLRT3 fibronectin leucine rich transmembrane protein 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:21673655 MGI
Ensembl		 PMID:21673655 GO_REF:0000107 RGD:8554719 NCBI chr24:8,354,151...8,367,601
Ensembl chr24:8,364,115...8,366,064 		JBrowse link
G FOXD1 forkhead box D1 acts_upstream_of_or_within ISO (PMID:15509772) MGI PMID:15509772
G GAP43 growth associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10662636) Ensembl
MGI		 PMID:10662636 GO_REF:0000107 NCBI chr33:19,668,491...19,770,509
Ensembl chr33:19,656,835...19,770,408 		JBrowse link
G GAS1 growth arrest specific 1 acts_upstream_of_or_within ISO (PMID:17504941) MGI PMID:17504941 NCBI chr 1:72,927,346...72,930,119
Ensembl chr 1:72,927,670...72,928,827 		JBrowse link
G GATA3 GATA binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11135239) Ensembl
MGI		 PMID:11135239 GO_REF:0000107 NCBI chr 2:28,068,143...28,098,445
Ensembl chr 2:28,069,051...28,087,760 		JBrowse link
G GBX2 gastrulation brain homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11967891) Ensembl
MGI		 PMID:11967891 GO_REF:0000107 NCBI chr25:47,005,509...47,008,367
Ensembl chr25:47,005,504...47,008,512 		JBrowse link
G GDF7 growth differentiation factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12639970) Ensembl
MGI		 PMID:12639970 GO_REF:0000107 NCBI chr17:15,627,739...15,636,513 JBrowse link
G GFRA3 GDNF family receptor alpha 3 acts_upstream_of_or_within ISO (PMID:10482239)
(PMID:12160745)		 MGI PMID:10482239 PMID:12160745 NCBI chr11:25,881,523...25,897,863
Ensembl chr11:25,882,099...25,897,817 		JBrowse link
G GLI2 GLI family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10409510) Ensembl
MGI		 PMID:10409510 GO_REF:0000107 NCBI chr19:29,128,401...29,383,324
Ensembl chr19:29,130,227...29,383,658 		JBrowse link
G GLI3 GLI family zinc finger 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:20943929)
(PMID:15065125)		 Ensembl
MGI		 PMID:15065125 PMID:20943929 GO_REF:0000107 NCBI chr18:7,800,817...8,071,531
Ensembl chr18:7,801,394...8,068,132 		JBrowse link
G KLF7 KLF transcription factor 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15964824) Ensembl
MGI		 PMID:15964824 GO_REF:0000107 NCBI chr37:15,515,563...15,607,345
Ensembl chr37:15,521,622...15,605,824 		JBrowse link
G L1CAM L1 cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18650339)
(PMID:18550718)
(PMID:12533613), (PMID:18550718)		 Ensembl
MGI		 PMID:12533613 PMID:18550718 PMID:18650339 GO_REF:0000107 NCBI chr  X:121,708,695...121,722,819
Ensembl chr  X:121,708,894...121,733,365 		JBrowse link
G LAMA2 laminin subunit alpha 2 acts_upstream_of_or_within ISO (PMID:19295126) MGI PMID:19295126 NCBI chr 1:67,645,461...68,096,506
Ensembl chr 1:67,611,122...68,095,914 		JBrowse link
G LAMB2 laminin subunit beta 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19295126) Ensembl
MGI		 PMID:19295126 GO_REF:0000107 NCBI chr20:40,036,967...40,062,628
Ensembl chr20:40,050,157...40,062,523 		JBrowse link
G LGI1 leucine rich glioma inactivated 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:7,966,485...8,005,995
Ensembl chr28:7,966,593...8,012,313 		JBrowse link
G LHX2 LIM homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17493606) Ensembl
MGI		 PMID:17493606 GO_REF:0000107 NCBI chr 9:58,825,505...58,859,311
Ensembl chr 9:58,825,492...58,845,883 		JBrowse link
G LMX1A LIM homeobox transcription factor 1 alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15183721) Ensembl
MGI		 PMID:15183721 GO_REF:0000107 NCBI chr38:17,958,366...18,111,155
Ensembl chr38:17,956,961...18,109,049 		JBrowse link
G MAPK8IP3 mitogen-activated protein kinase 8 interacting protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15572149) Ensembl
MGI		 PMID:15572149 GO_REF:0000107 NCBI chr 6:39,132,746...39,179,427
Ensembl chr 6:39,133,965...39,179,505 		JBrowse link
G MATN2 matrilin 2 acts_upstream_of_or_within ISO (PMID:19295126) MGI PMID:19295126 NCBI chr13:149,108...296,005
Ensembl chr13:149,095...295,994 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G MYH10 myosin heavy chain 10 acts_upstream_of_or_within ISO (PMID:15880105) MGI PMID:15880105 NCBI chr 5:33,239,800...33,360,459
Ensembl chr 5:33,241,266...33,360,934 		JBrowse link
G NECTIN1 nectin cell adhesion molecule 1 ISO RGD PMID:15328010 RGD:1599806 NCBI chr 5:14,228,197...14,292,825
Ensembl chr 5:14,228,197...14,315,060 		JBrowse link
G NEUROG2 neurogenin 2 acts_upstream_of_or_within ISO (PMID:12895419), (PMID:15328020) MGI PMID:12895419 PMID:15328020 NCBI chr32:32,310,939...32,313,492
Ensembl chr32:32,312,097...32,312,915 		JBrowse link
G NFASC neurofascin acts_upstream_of_or_within ISO (PMID:15479642) MGI PMID:15479642 NCBI chr38:1,367,128...1,546,909
Ensembl chr38:1,366,251...1,543,630 		JBrowse link
G NGFR nerve growth factor receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11978834) Ensembl
MGI		 PMID:11978834 GO_REF:0000107 NCBI chr 9:25,598,468...25,621,021
Ensembl chr 9:25,601,074...25,623,274 		JBrowse link
G NKX2-1 NK2 homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11830575) Ensembl
MGI		 PMID:11830575 GO_REF:0000107
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12435358) Ensembl
MGI		 PMID:12435358 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NR4A3 nuclear receptor subfamily 4 group A member 3 acts_upstream_of_or_within ISO (PMID:15456880) MGI PMID:15456880 NCBI chr11:56,806,506...56,846,997
Ensembl chr11:56,812,804...56,847,689 		JBrowse link
G NRCAM neuronal cell adhesion molecule involved_in ISO (PMID:12182881) UniProt PMID:12182881 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230 		JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794)
(PMID:12852851)
(PMID:15604101), (PMID:15814794)		 InterPro
MGI
Ensembl		 PMID:12852851 PMID:15604101 PMID:15814794 GO_REF:0000002 GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G NRP2 neuropilin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15814794) RGD
MGI
Ensembl
InterPro		 PMID:9288754 PMID:15814794 GO_REF:0000002 GO_REF:0000107 RGD:633436 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949 		JBrowse link
G NTF3 neurotrophin 3 acts_upstream_of_or_within ISO (PMID:15550985)
(PMID:8861722)		 MGI PMID:8861722 PMID:15550985 NCBI chr27:39,383,017...39,454,613
Ensembl chr27:39,383,152...39,454,601 		JBrowse link
G NTN1 netrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12051827), (PMID:12679031), (PMID:17086203)
(PMID:10908620), (PMID:16481423), (PMID:17898206)		 Ensembl
MGI		 PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 More... GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899 		JBrowse link
G NTRK1 neurotrophic receptor tyrosine kinase 1 ISO RGD PMID:18344912 RGD:5684394 NCBI chr 7:41,140,931...41,159,326
Ensembl chr 7:41,140,879...41,159,288 		JBrowse link
G OR10A4 olfactory receptor family 10 subfamily A member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21646512) Ensembl
MGI		 PMID:21646512 GO_REF:0000107 NCBI chr21:30,343,764...30,344,711
Ensembl chr21:30,343,764...30,344,711 		JBrowse link
G OR8A1 olfactory receptor family 8 subfamily A member 1 acts_upstream_of_or_within ISO (PMID:21646512) MGI PMID:21646512 NCBI chr 5:9,826,884...9,827,816
Ensembl chr 5:9,826,884...9,827,813 		JBrowse link
G OTX2 orthodenticle homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 8:32,435,169...32,445,093
Ensembl chr 8:32,435,863...32,445,446 		JBrowse link
G PAX6 paired box 6 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11967891), (PMID:14586016) Ensembl
MGI		 PMID:11967891 PMID:14586016 GO_REF:0000107
G PGRMC1 progesterone receptor membrane component 1 ISO RGD PMID:10656251 RGD:727289 NCBI chr  X:91,329,243...91,337,951
Ensembl chr  X:91,329,243...91,337,951 		JBrowse link
G PLA2G10 phospholipase A2 group X acts_upstream_of_or_within ISO (PMID:15927955) MGI PMID:15927955 NCBI chr 6:28,573,239...28,591,714
Ensembl chr 6:28,574,387...28,591,703 		JBrowse link
G PLXNA3 plexin A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11683995) Ensembl
MGI		 PMID:11683995 GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794) Ensembl
MGI		 PMID:15814794 GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11163266) Ensembl
MGI		 PMID:11163266 GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
G PTPRO protein tyrosine phosphatase receptor type O involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:31,082,334...31,322,024
Ensembl chr27:31,084,544...31,322,022 		JBrowse link
G RAC1 Rac family small GTPase 1 acts_upstream_of_or_within ISO (PMID:17409253) MGI PMID:17409253 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G RELN reelin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16324103) Ensembl
MGI		 PMID:16324103 GO_REF:0000107 NCBI chr18:16,275,822...16,773,875
Ensembl chr18:16,275,837...16,773,875 		JBrowse link
G ROBO1 roundabout guidance receptor 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15091338)
(PMID:15084255)		 RGD
MGI
InterPro		 PMID:9458045 PMID:15084255 PMID:15091338 GO_REF:0000002 RGD:61733 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G ROBO2 roundabout guidance receptor 2 acts_upstream_of_or_within ISO (PMID:15091338) RGD
MGI		 PMID:10102268 PMID:15091338 RGD:68763 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G ROBO3 roundabout guidance receptor 3 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15084255)
(PMID:15084255), (PMID:15233918)		 MGI
Ensembl		 PMID:15084255 PMID:15233918 GO_REF:0000107 NCBI chr 5:9,563,353...9,579,111
Ensembl chr 5:9,563,345...9,579,289 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA Ensembl GO_REF:0000107
G RUNX3 RUNX family transcription factor 3 acts_upstream_of_or_within ISO (PMID:12352981) MGI PMID:12352981
G RYK receptor like tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G SCN1B sodium voltage-gated channel beta subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18354028) Ensembl
MGI		 PMID:18354028 GO_REF:0000107 NCBI chr 1:117,504,428...117,510,666
Ensembl chr 1:117,503,828...117,511,727 		JBrowse link
G SEMA3A semaphorin 3A acts_upstream_of_or_within
involved_in		 ISO
IEA		 PMID:21068336
(PMID:15604101)
(PMID:17417650), (PMID:17428830)
(PMID:12435358), (PMID:15814794), (PMID:15869472)		 MGI
UniProt		 PMID:12435358 PMID:15604101 PMID:15814794 PMID:15869472 PMID:17417650 More... GO_REF:0000117 RGD:8554551 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3C semaphorin 3C involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:20,457,683...20,748,008
Ensembl chr18:20,459,925...20,635,276 		JBrowse link
G SEMA3F semaphorin 3F acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15814794)
(PMID:12435358)		 MGI
Ensembl		 PMID:12435358 PMID:15814794 GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325 		JBrowse link
G SEMA4F ssemaphorin 4F ISO RGD PMID:10051670 RGD:69991 NCBI chr17:48,479,389...48,510,659
Ensembl chr17:48,479,659...48,506,660 		JBrowse link
G SEMA5A semaphorin 5A acts_upstream_of_or_within ISO (PMID:12506007) MGI PMID:12506007 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280 		JBrowse link
G SEMA6A semaphorin 6A involved_in ISO (PMID:16205717) UniProt PMID:16205717 NCBI chr11:6,117,063...6,245,443
Ensembl chr11:6,119,964...6,177,817 		JBrowse link
G SEMA6B semaphorin 6B involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:55,151,913...55,173,434
Ensembl chr20:55,161,818...55,173,135 		JBrowse link
G SEMA6C semaphorin 6C ISO RGD PMID:10049528 RGD:69992 NCBI chr17:60,195,798...60,208,630
Ensembl chr17:60,195,785...60,208,630 		JBrowse link
G SHH sonic hedgehog signaling molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12679031)
(PMID:12756179), (PMID:15065125)		 Ensembl
MGI		 PMID:12679031 PMID:12756179 PMID:15065125 GO_REF:0000107 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SLIT1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12954717)
(PMID:15091338)
(PMID:12051827)
(PMID:11804571)		 Ensembl
MGI		 PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338 GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15091338)
(PMID:11804571)
(PMID:12879062), (PMID:12954717)
(PMID:14605369)		 Ensembl
MGI
UniProt		 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 PMID:15091338 GO_REF:0000107 GO_REF:0000117 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G SLIT3 slit guidance ligand 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12954717) Ensembl
MGI		 PMID:12954717 GO_REF:0000107 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714 		JBrowse link
G SMAD4 SMAD family member 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21300867) Ensembl
MGI		 PMID:21300867 GO_REF:0000107 NCBI chr 1:23,875,989...23,930,027
Ensembl chr 1:23,882,139...23,969,405 		JBrowse link
G TGFB2 transforming growth factor beta 2 acts_upstream_of_or_within ISO (PMID:15528466) MGI PMID:15528466 NCBI chr38:13,430,832...13,511,655
Ensembl chr38:13,429,148...13,510,242 		JBrowse link
G TTC8 tetratricopeptide repeat domain 8 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21646512) Ensembl
MGI		 PMID:21646512 GO_REF:0000107 NCBI chr 8:60,061,670...60,115,464
Ensembl chr 8:60,061,732...60,115,075 		JBrowse link
G TUBB3 tubulin beta 3 class III involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:63,681,765...63,690,898
Ensembl chr 5:63,681,752...63,729,684 		JBrowse link
G ULK1 unc-51 like autophagy activating kinase 1 acts_upstream_of_or_within ISO (PMID:29099309) MGI PMID:29099309 NCBI chr26:968,714...982,244
Ensembl chr26:970,138...982,229 		JBrowse link
G ULK2 unc-51 like autophagy activating kinase 2 acts_upstream_of_or_within ISO (PMID:29099309) MGI PMID:29099309 NCBI chr 5:40,355,070...40,437,758
Ensembl chr 5:40,354,263...40,435,747 		JBrowse link
G UNC5A unc-5 netrin receptor A ISO RGD PMID:9126742 RGD:634450 NCBI chr 4:36,489,583...36,551,743
Ensembl chr 4:36,490,578...36,551,935 		JBrowse link
G UNC5B unc-5 netrin receptor B acts_upstream_of_or_within ISO PMID:21673655 RGD
MGI		 PMID:9126742 PMID:21673655 RGD:634450 RGD:8554719 NCBI chr 4:22,003,131...22,084,107
Ensembl chr 4:22,003,131...22,081,744 		JBrowse link
G UNC5C unc-5 netrin receptor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23144223) Ensembl
MGI		 PMID:23144223 GO_REF:0000107 NCBI chr32:17,981,286...18,333,111
Ensembl chr32:17,987,464...18,333,602 		JBrowse link
G UNC5D unc-5 netrin receptor D acts_upstream_of_or_within ISO (PMID:21673655) MGI PMID:21673655 NCBI chr16:29,204,364...29,733,726
Ensembl chr16:29,210,853...29,732,912 		JBrowse link
G USP33 ubiquitin specific peptidase 33 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:69,118,953...69,170,864
Ensembl chr 6:69,118,333...69,169,966 		JBrowse link
G VASP vasodilator stimulated phosphoprotein acts_upstream_of_or_within
involved_in		 ISO
IBA		 (PMID:15371503) MGI
GO_Central		 PMID:15371503 GO_REF:0000033 NCBI chr 1:110,050,154...110,063,125
Ensembl chr 1:110,050,154...110,062,827 		JBrowse link
G VAX1 ventral anterior homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10601035) Ensembl
MGI		 PMID:10601035 GO_REF:0000107 NCBI chr28:27,624,699...27,628,736
Ensembl chr28:27,623,971...27,628,717 		JBrowse link
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
anterior/posterior axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCC DCC netrin 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18479186) Ensembl
MGI		 PMID:18479186 GO_REF:0000107 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G NTN1 netrin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18479186) Ensembl
MGI		 PMID:18479186 GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899 		JBrowse link
G UNC5A unc-5 netrin receptor A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18479186) Ensembl
MGI		 PMID:18479186 GO_REF:0000107 NCBI chr 4:36,489,583...36,551,743
Ensembl chr 4:36,490,578...36,551,935 		JBrowse link
G UNC5B unc-5 netrin receptor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18479186) Ensembl
MGI		 PMID:18479186 GO_REF:0000107 NCBI chr 4:22,003,131...22,084,107
Ensembl chr 4:22,003,131...22,081,744 		JBrowse link
G UNC5C unc-5 netrin receptor C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18479186) Ensembl
MGI		 PMID:18479186 GO_REF:0000107 NCBI chr32:17,981,286...18,333,111
Ensembl chr32:17,987,464...18,333,602 		JBrowse link
axon choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EFNB3 ephrin B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11182083) Ensembl
MGI		 PMID:11182083 GO_REF:0000107 NCBI chr 5:32,588,062...32,592,390
Ensembl chr 5:32,574,134...32,594,333 		JBrowse link
G GAP43 growth associated protein 43 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:7859286) Ensembl
MGI		 PMID:7859286 GO_REF:0000107 NCBI chr33:19,668,491...19,770,509
Ensembl chr33:19,656,835...19,770,408 		JBrowse link
axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALCAM activated leukocyte cell adhesion molecule involved_in ISS UniProt GO_REF:0000024 NCBI chr33:10,983,363...11,195,170
Ensembl chr33:10,983,363...11,370,085 		JBrowse link
G NRP1 neuropilin 1 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9753685) Ensembl
MGI		 PMID:9753685 GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949 		JBrowse link
G PLXNA3 plexin A3 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:11683995) Ensembl
MGI		 PMID:11683995 GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G RYK receptor like tyrosine kinase involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16723543) Ensembl
MGI		 PMID:16723543 GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G SEMA3A semaphorin 3A acts_upstream_of
involved_in		 ISO (PMID:11683995)
(PMID:22790009)
(PMID:7748561), (PMID:9753685)
(PMID:18550718)		 MGI
BHF-UCL		 PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3F semaphorin 3F involved_in
acts_upstream_of		 IEA
ISO		 (PMID:9753685)
(PMID:11683995)		 Ensembl
MGI		 PMID:9753685 PMID:11683995 GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325 		JBrowse link
G SLIT1 slit guidance ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G SLIT3 slit guidance ligand 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:42,506,680...43,099,053
Ensembl chr 4:42,508,426...43,094,714 		JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:19447091 RGD:2324988 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of		 IEA
ISO		 (PMID:16723543) Ensembl
MGI		 PMID:16723543 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
axon midline choice point recognition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G APP amyloid beta precursor protein involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:8001115) Ensembl
MGI		 PMID:8001115 GO_REF:0000107 NCBI chr31:21,351,207...21,614,466
Ensembl chr31:21,351,207...21,614,337 		JBrowse link
G DIAPH1 diaphanous related formin 1 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chr 2:36,483,781...36,581,390
Ensembl chr 2:36,485,571...36,581,320 		JBrowse link
G DIAPH2 diaphanous related formin 2 acts_upstream_of_or_within ISO (PMID:23890216) MGI PMID:23890216 NCBI chr  X:69,994,674...71,044,178
Ensembl chr  X:69,994,650...71,043,198 		JBrowse link
G FOXG1 forkhead box G1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15240555) Ensembl
MGI		 PMID:15240555 GO_REF:0000107 NCBI chr 8:8,276,300...8,279,785 JBrowse link
G ROBO1 roundabout guidance receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chr31:8,082,363...8,594,623
Ensembl chr31:7,626,126...8,593,728 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:18986510) UniProt PMID:18986510 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,563,353...9,579,111
Ensembl chr 5:9,563,345...9,579,289 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA Ensembl GO_REF:0000107
branchiomotor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G MYCBP2 MYC binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18031680) Ensembl
MGI		 PMID:18031680 GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PLXNA3 plexin A3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:18804103) ParkinsonsUK-UCL PMID:18804103 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3F semaphorin 3F involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325 		JBrowse link
chemoattraction of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LRP1 LDL receptor related protein 1 ISO RGD PMID:26598525 RGD:11097297 NCBI chr10:1,260,256...1,341,705
Ensembl chr10:1,260,719...1,352,271 		JBrowse link
G LRP2 LDL receptor related protein 2 ISO RGD PMID:26598525 RGD:11097297 NCBI chr36:13,910,450...14,107,081
Ensembl chr36:13,911,865...14,107,546 		JBrowse link
chemoattraction of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT7B Wnt family member 7B involved_in ISO (PMID:21106844) ParkinsonsUK-UCL PMID:21106844 NCBI chr10:20,160,916...20,208,786
Ensembl chr10:20,160,206...20,243,160 		JBrowse link
chemoattraction of serotonergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
chemorepulsion of axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NTN1 netrin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:33,654,723...33,825,832
Ensembl chr 5:33,637,142...33,825,899 		JBrowse link
G UNC5C unc-5 netrin receptor C involved_in IEA Ensembl GO_REF:0000107 NCBI chr32:17,981,286...18,333,111
Ensembl chr32:17,987,464...18,333,602 		JBrowse link
chemorepulsion of branchiomotor axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794) Ensembl
MGI		 PMID:15814794 GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
chemorepulsion of dopaminergic neuron axon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G RYK receptor like tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G WNT5A Wnt family member 5A involved_in IEA Ensembl GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
commissural neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ADAM17 ADAM metallopeptidase domain 17 involved_in IEA Ensembl GO_REF:0000107 NCBI chr17:6,589,874...6,638,788
Ensembl chr17:6,589,878...6,638,731 		JBrowse link
G DAG1 dystroglycan 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:23217742) MGI
Ensembl		 PMID:23217742 GO_REF:0000107 NCBI chr20:39,707,672...39,779,094
Ensembl chr20:39,708,053...39,778,550 		JBrowse link
G EPHB2 EPH receptor B2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G FZD3 frizzled class receptor 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14671310) Ensembl
MGI		 PMID:14671310 GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G GDNF glial cell derived neurotrophic factor involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:70,966,694...70,991,860
Ensembl chr 4:70,971,432...70,989,714 		JBrowse link
G NCAM1 neural cell adhesion molecule 1 involved_in ISO (PMID:22998873) ARUK-UCL PMID:22998873 NCBI chr 5:19,895,587...20,192,334
Ensembl chr 5:19,895,613...20,191,995 		JBrowse link
G NELL2 neural EGFL like 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:9,300,001...9,680,974
Ensembl chr27:9,299,893...9,680,363 		JBrowse link
G NFIB nuclear factor I B involved_in IEA Ensembl GO_REF:0000107 NCBI chr11:34,573,136...35,010,319
Ensembl chr11:34,579,431...34,901,322 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PTCH1 patched 1 ISO RGD PMID:19946319 RGD:12879429 NCBI chr 1:71,246,750...71,309,036
Ensembl chr 1:71,238,195...71,305,662 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 5:9,563,353...9,579,111
Ensembl chr 5:9,563,345...9,579,289 		JBrowse link
G ROBO3 roundabout guidance receptor 3 involved_in IEA Ensembl GO_REF:0000107
G RYK receptor like tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16723543) Ensembl
MGI		 PMID:16723543 GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G SHH sonic hedgehog signaling molecule ISO RGD PMID:19946319 RGD:12879429 NCBI chr16:18,650,553...18,663,571
Ensembl chr16:18,484,809...18,662,903 		JBrowse link
G SMO smoothened, frizzled class receptor ISO RGD PMID:19946319 RGD:12879429 NCBI chr14:7,518,871...7,527,703
Ensembl chr14:7,518,856...7,528,033 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
NOT|involved_in		 IEA
ISO		 (PMID:21658587) Ensembl
BHF-UCL		 PMID:21658587 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
corticospinal neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SCN1B sodium voltage-gated channel beta subunit 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18354028) Ensembl
MGI		 PMID:18354028 GO_REF:0000107 NCBI chr 1:117,504,428...117,510,666
Ensembl chr 1:117,503,828...117,511,727 		JBrowse link
corticospinal neuron axon guidance through spinal cord term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
dopaminergic neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 involved_in ISO (PMID:21106844) ParkinsonsUK-UCL PMID:21106844 NCBI chr20:40,457,430...40,495,128
Ensembl chr20:40,457,657...40,483,881 		JBrowse link
G FZD3 frizzled class receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:21106844) ParkinsonsUK-UCL PMID:21106844 NCBI chr38:21,822,873...21,824,537 JBrowse link
dorsal/ventral axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DCC DCC netrin 1 receptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:17898206) Ensembl
MGI		 PMID:17898206 GO_REF:0000107 NCBI chr 1:21,788,833...22,494,849
Ensembl chr 1:21,793,328...22,494,967 		JBrowse link
G FGF8 fibroblast growth factor 8 ISO projection of trochlear axons through the isthmic organizer RGD PMID:12403710 RGD:2289355 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G SLIT1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11804571) Ensembl
MGI		 PMID:11804571 GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 acts_upstream_of_or_within ISO (PMID:11804571) MGI PMID:11804571 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
interneuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G DLX5 distal-less homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:25937343) Ensembl
MGI		 PMID:25937343 GO_REF:0000107 NCBI chr14:22,080,351...22,085,188
Ensembl chr14:22,080,699...22,084,867 		JBrowse link
G MIR200A microRNA mir-200a acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 5:56,369,063...56,369,152
Ensembl chr 5:56,369,061...56,369,151 		JBrowse link
G MIR200B microRNA mir-200b acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 5:56,368,400...56,368,479
Ensembl chr 5:56,368,400...56,368,479 		JBrowse link
G MIR200C microRNA mir-200c acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr27:38,082,097...38,082,159
Ensembl chr27:38,082,091...38,082,169 		JBrowse link
G MIR9-2 microRNA mir-9-2 acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 3:19,997,697...19,997,756
Ensembl chr 3:19,997,682...19,997,768 		JBrowse link
G MIR9-3 microRNA mir-9-3 acts_upstream_of_or_within ISO (PMID:25937343) MGI PMID:25937343 NCBI chr 3:52,410,840...52,410,900
Ensembl chr 3:52,410,825...52,410,914 		JBrowse link
motor neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALCAM activated leukocyte cell adhesion molecule involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15345243) Ensembl
MGI		 PMID:15345243 GO_REF:0000107 NCBI chr33:10,983,363...11,195,170
Ensembl chr33:10,983,363...11,370,085 		JBrowse link
G ARK2C arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23610558) Ensembl
MGI		 PMID:23610558 GO_REF:0000107 NCBI chr 7:44,834,006...44,939,538
Ensembl chr 7:44,840,099...44,940,619 		JBrowse link
G CDK5 cyclin dependent kinase 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16203963) Ensembl
MGI		 PMID:16203963 GO_REF:0000107 NCBI chr16:15,105,177...15,113,085
Ensembl chr16:15,101,230...15,109,269 		JBrowse link
G CHN1 chimerin 1 involved_in ISO (PMID:17785183) UniProt PMID:17785183 NCBI chr36:18,785,470...18,990,409
Ensembl chr36:18,786,073...18,980,993 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 acts_upstream_of_or_within ISO (PMID:16129397) MGI PMID:16129397 NCBI chr28:2,895,916...2,903,543 JBrowse link
G CXCR4 C-X-C motif chemokine receptor 4 acts_upstream_of_or_within ISO (PMID:16129397)
(PMID:18031680)		 MGI PMID:16129397 PMID:18031680 NCBI chr19:38,874,650...38,877,740
Ensembl chr19:38,874,145...38,877,740 		JBrowse link
G EGR2 early growth response 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9806922) Ensembl
MGI		 PMID:9806922 GO_REF:0000107 NCBI chr 4:14,705,384...14,810,130
Ensembl chr 4:14,706,600...14,709,497 		JBrowse link
G EPHA3 EPH receptor A3 NOT|involved_in ISO (PMID:17046737) UniProt PMID:17046737 NCBI chr33:770,234...1,092,063
Ensembl chr33:769,423...1,115,986 		JBrowse link
G EPHA4 EPH receptor A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:27,670,143...27,809,642
Ensembl chr37:27,677,566...27,809,646 		JBrowse link
G ERBB2 erb-b2 receptor tyrosine kinase 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10655525) Ensembl
MGI		 PMID:10655525 GO_REF:0000107 NCBI chr 9:22,760,373...22,785,367
Ensembl chr 9:22,759,256...22,785,294 		JBrowse link
G ETV4 ETS variant transcription factor 4 acts_upstream_of_or_within ISO (PMID:12372283) MGI PMID:12372283 NCBI chr 9:19,715,259...19,731,085
Ensembl chr 9:19,715,535...19,730,456 		JBrowse link
G FGF8 fibroblast growth factor 8 ISO projection of trochlear axons through the isthmic organizer RGD PMID:12403710 RGD:2289355 NCBI chr28:14,362,407...14,367,109
Ensembl chr28:14,362,109...14,367,468 		JBrowse link
G FOXP1 forkhead box P1 involved_in ISO (PMID:20711475) UniProt PMID:20711475 NCBI chr20:20,438,631...21,020,516
Ensembl chr20:20,788,433...21,016,397 		JBrowse link
G HOXA1 homeobox A1 acts_upstream_of_or_within ISO (PMID:9806922) MGI PMID:9806922 NCBI chr14:40,267,033...40,272,212
Ensembl chr14:40,267,528...40,269,681 		JBrowse link
G HOXA2 homeobox A2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9367425) Ensembl
MGI		 PMID:9367425 GO_REF:0000107 NCBI chr14:40,273,992...40,276,975
Ensembl chr14:40,274,469...40,276,239 		JBrowse link
G KIF5C kinesin family member 5C involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:10964943) Ensembl
MGI		 PMID:10964943 GO_REF:0000107 NCBI chr19:50,535,622...50,684,485
Ensembl chr19:50,535,456...50,668,738 		JBrowse link
G LHX1 LIM homeobox 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 9:36,760,890...36,768,345
Ensembl chr 9:36,761,826...36,768,164 		JBrowse link
G LHX3 LIM homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9865699) Ensembl
MGI		 PMID:9865699 GO_REF:0000107 NCBI chr 9:49,248,555...49,254,128
Ensembl chr 9:49,248,621...49,254,118 		JBrowse link
G LHX4 LIM homeobox 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9865699) Ensembl
MGI		 PMID:9865699 GO_REF:0000107 NCBI chr 7:13,779,574...13,825,650
Ensembl chr 7:13,779,774...13,821,317 		JBrowse link
G LMO4 LIM domain only 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 6:60,892,478...60,909,910
Ensembl chr 6:60,727,270...60,941,058 		JBrowse link
G LOC119881459 ras-related C3 botulinum toxin substrate 1 involved_in IBA GO_Central GO_REF:0000033
G MNX1 motor neuron and pancreas homeobox 1 acts_upstream_of_or_within ISO (PMID:10482234) MGI PMID:10482234 NCBI chr16:19,509,038...19,514,378
Ensembl chr16:19,499,582...19,512,836 		JBrowse link
G MYCBP2 MYC binding protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18031680) Ensembl
MGI		 PMID:18031680 GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370 		JBrowse link
G NOG noggin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12435358) Ensembl
MGI		 PMID:12435358 GO_REF:0000107 NCBI chr 9:31,453,604...31,456,060 JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G RAC1 Rac family small GTPase 1 involved_in IBA GO_Central GO_REF:0000033 NCBI chr 6:11,726,259...11,758,532
Ensembl chr 6:11,655,494...11,757,216 		JBrowse link
G SEMA3A semaphorin 3A involved_in ISO (PMID:18804103) ParkinsonsUK-UCL PMID:18804103 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SLIT1 slit guidance ligand 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
negative regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G HDAC6 histone deacetylase 6 ISO RGD PMID:19884510 RGD:9681717 NCBI chr  X:42,004,268...42,024,726
Ensembl chr  X:42,004,591...42,024,427 		JBrowse link
G NRP1 neuropilin 1 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:9753685) RGD
MGI
Ensembl		 PMID:9288754 PMID:9753685 GO_REF:0000107 RGD:633436 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PLXNA3 plexin A3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11683995) Ensembl
MGI		 PMID:11683995 GO_REF:0000107 NCBI chr  X:122,165,460...122,180,727
Ensembl chr  X:122,167,144...122,180,951 		JBrowse link
G RYK receptor like tyrosine kinase involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16723543) Ensembl
MGI		 PMID:16723543 GO_REF:0000107 NCBI chr23:30,968,105...31,051,353
Ensembl chr23:30,968,231...31,051,605 		JBrowse link
G SEMA3A semaphorin 3A acts_upstream_of_or_within ISO (PMID:11683995)
(PMID:7748561), (PMID:9753685)
(PMID:18550718)		 MGI PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
G SEMA3F semaphorin 3F involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9753685)
(PMID:11683995)		 Ensembl
MGI		 PMID:9753685 PMID:11683995 GO_REF:0000107 NCBI chr20:39,135,580...39,165,381
Ensembl chr20:39,136,523...39,161,325 		JBrowse link
G SEMA5A semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280 		JBrowse link
G SLIT1 slit guidance ligand 1 ISO RGD PMID:15632296 RGD:1358459 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G WNT3 Wnt family member 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr 9:10,073,019...10,124,454
Ensembl chr 9:10,077,567...10,124,508 		JBrowse link
G WNT3A Wnt family member 3A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18716223) Ensembl
MGI		 PMID:18716223 GO_REF:0000107 NCBI chr14:864,393...899,698
Ensembl chr14:863,424...896,412 		JBrowse link
G WNT5A Wnt family member 5A involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16723543) Ensembl
MGI		 PMID:16723543 GO_REF:0000107 NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673 		JBrowse link
negative regulation of retinal ganglion cell axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G SLIT2 slit guidance ligand 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
olfactory bulb axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BCL11B BCL11 transcription factor B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:21752992) Ensembl
MGI		 PMID:21752992 GO_REF:0000107 NCBI chr 8:67,622,592...67,713,922
Ensembl chr 8:67,622,708...67,714,404 		JBrowse link
positive regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BMPR2 bone morphogenetic protein receptor type 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:11,342,292...11,540,199
Ensembl chr37:11,342,384...11,533,024 		JBrowse link
G CXCL12 C-X-C motif chemokine ligand 12 ISO RGD PMID:18701697 RGD:2306571 NCBI chr28:2,895,916...2,903,543 JBrowse link
G DSCAM DS cell adhesion molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chr31:34,666,300...35,277,651
Ensembl chr31:34,669,424...35,400,160 		JBrowse link
G MEGF8 multiple EGF like domains 8 involved_in ISO (PMID:24052814) UniProt PMID:24052814 NCBI chr 1:112,020,344...112,063,120
Ensembl chr 1:112,021,960...112,024,773 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G SEMA5A semaphorin 5A involved_in ISO PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr34:4,612,202...5,089,071
Ensembl chr34:4,612,142...5,082,280 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
NOT|involved_in		 IEA
ISO		 (PMID:21658587) Ensembl
BHF-UCL		 PMID:21658587 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
positive regulation of axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC478702 tubulin beta-2B chain involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:3,494,982...3,498,274
Ensembl chr35:3,495,277...3,498,248 		JBrowse link
G ROBO3 roundabout guidance receptor 3 ISO RGD PMID:24936616 RGD:243048438 NCBI chr 5:9,563,353...9,579,111
Ensembl chr 5:9,563,345...9,579,289 		JBrowse link
positive regulation of retinal ganglion cell axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ATOH7 atonal bHLH transcription factor 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 4:19,466,476...19,479,279
Ensembl chr 4:19,478,694...19,479,152 		JBrowse link
regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NRP1 neuropilin 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794) Ensembl
MGI		 PMID:15814794 GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G PLXNA4 plexin A4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15814794) Ensembl
MGI		 PMID:15814794 GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
G SEMA3A semaphorin 3A involved_in IEA Ensembl GO_REF:0000107 NCBI chr18:23,411,607...23,866,631
Ensembl chr18:23,414,576...23,867,098 		JBrowse link
regulation of axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AGRN agrin ISO RGD PMID:17870250 RGD:2304008 NCBI chr 5:56,239,621...56,273,679
Ensembl chr 5:56,239,701...56,272,745 		JBrowse link
G FEZF2 FEZ family zinc finger 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:24997765)
(PMID:16314561)
(PMID:16284245)		 Ensembl
MGI		 PMID:16284245 PMID:16314561 PMID:24997765 GO_REF:0000107 NCBI chr20:28,704,287...28,708,620
Ensembl chr20:28,703,623...28,708,282 		JBrowse link
G KIF21A kinesin family member 21A involved_in IEA Ensembl GO_REF:0000107 NCBI chr27:14,205,980...14,328,281
Ensembl chr27:14,181,837...14,327,492 		JBrowse link
G MYCBP2 MYC binding protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr22:30,614,692...30,874,173
Ensembl chr22:30,615,369...30,874,370 		JBrowse link
G NOVA2 NOVA alternative splicing regulator 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 1:109,657,693...109,683,277
Ensembl chr 1:109,659,184...109,682,902 		JBrowse link
G TBR1 T-box brain transcription factor 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11967891), (PMID:24441682) Ensembl
MGI		 PMID:11967891 PMID:24441682 GO_REF:0000107 NCBI chr36:6,989,644...6,997,916
Ensembl chr36:6,989,488...6,997,900 		JBrowse link
G YTHDF1 YTH N6-methyladenosine RNA binding protein F1 involved_in ISO (PMID:30843071) UniProt PMID:30843071 NCBI chr24:46,927,218...46,940,015
Ensembl chr24:46,927,848...46,951,949 		JBrowse link
regulation of retinal ganglion cell axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G POU4F2 POU class 4 homeobox 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
retinal ganglion cell axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ALCAM activated leukocyte cell adhesion molecule involved_in ISS UniProt GO_REF:0000024 NCBI chr33:10,983,363...11,195,170
Ensembl chr33:10,983,363...11,370,085 		JBrowse link
G BMPR1B bone morphogenetic protein receptor type 1B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12654290) Ensembl
MGI		 PMID:12654290 GO_REF:0000107 NCBI chr32:17,761,555...17,978,056
Ensembl chr32:17,870,904...18,016,444 		JBrowse link
G EFNA5 ephrin A5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15996548) Ensembl
MGI		 PMID:15996548 GO_REF:0000107 NCBI chr 3:4,272,138...4,546,527
Ensembl chr 3:4,272,518...4,542,049 		JBrowse link
G EPHA7 EPH receptor A7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15996548) Ensembl
MGI		 PMID:15996548 GO_REF:0000107 NCBI chr12:52,134,775...52,305,163
Ensembl chr12:52,137,605...52,305,162 		JBrowse link
G EPHB1 EPH receptor B1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr23:31,485,701...31,918,754
Ensembl chr23:31,485,534...31,917,393 		JBrowse link
G EPHB2 EPH receptor B2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr 2:76,427,112...76,551,494
Ensembl chr 2:76,428,203...76,612,786 		JBrowse link
G EPHB3 EPH receptor B3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12971893) Ensembl
MGI		 PMID:12971893 GO_REF:0000107 NCBI chr34:17,422,746...17,433,769
Ensembl chr34:17,422,842...17,462,954 		JBrowse link
G ISL1 ISL LIM homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18434421) Ensembl
MGI		 PMID:18434421 GO_REF:0000107 NCBI chr 4:63,638,009...63,648,492
Ensembl chr 4:63,637,443...63,648,183 		JBrowse link
G ISL2 ISL LIM homeobox 2 acts_upstream_of_or_within ISO (PMID:15537545) MGI PMID:15537545
G NDP norrin cystine knot growth factor NDP acts_upstream_of_or_within ISO (PMID:29079753) MGI PMID:29079753 NCBI chr  X:37,949,560...37,975,573
Ensembl chr  X:37,950,489...37,975,346 		JBrowse link
G NRCAM neuronal cell adhesion molecule acts_upstream_of_or_within ISO (PMID:16701205) MGI PMID:16701205 NCBI chr18:12,264,063...12,477,247
Ensembl chr18:12,264,063...12,475,230 		JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G POU4F2 POU class 4 homeobox 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18434421)
(PMID:11807038)		 Ensembl
MGI		 PMID:11807038 PMID:18434421 GO_REF:0000107 NCBI chr15:45,030,818...45,034,446
Ensembl chr15:45,031,094...45,032,784 		JBrowse link
G POU4F3 POU class 4 homeobox 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11807038) Ensembl
MGI		 PMID:11807038 GO_REF:0000107 NCBI chr 2:40,762,499...40,764,131
Ensembl chr 2:40,762,477...40,765,161 		JBrowse link
G PTPRM protein tyrosine phosphatase receptor type M involved_in IEA Ensembl GO_REF:0000107 NCBI chr 7:74,005,682...74,597,498
Ensembl chr 7:73,815,186...74,609,116 		JBrowse link
G ROBO2 roundabout guidance receptor 2 involved_in ISO (PMID:19782674) UniProt PMID:19782674 NCBI chr31:9,415,390...11,047,710
Ensembl chr31:9,419,026...11,022,392 		JBrowse link
G RPL24 ribosomal protein L24 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9331275) Ensembl
MGI		 PMID:9331275 GO_REF:0000107 NCBI chr33:8,018,183...8,023,779
Ensembl chr33:8,018,190...8,073,124 		JBrowse link
G SEMA4F ssemaphorin 4F acts_upstream_of_or_within ISO PMID:10051670 MGI PMID:10051670 RGD:69991 NCBI chr17:48,479,389...48,510,659
Ensembl chr17:48,479,659...48,506,660 		JBrowse link
G SLIT1 slit guidance ligand 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11804570), (PMID:16828733), (PMID:16885222)
(PMID:16828733), (PMID:16885222)		 Ensembl
MGI		 PMID:11804570 PMID:16828733 PMID:16885222 GO_REF:0000107 NCBI chr28:10,351,758...10,519,322
Ensembl chr28:10,351,821...10,519,313 		JBrowse link
G SLIT2 slit guidance ligand 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16828733), (PMID:16885222)
(PMID:11804570), (PMID:16828733), (PMID:16885222)		 Ensembl
MGI		 PMID:11804570 PMID:16828733 PMID:16885222 GO_REF:0000107 NCBI chr 3:88,964,707...89,311,817
Ensembl chr 3:88,966,232...89,312,955 		JBrowse link
G VEGFA vascular endothelial growth factor A involved_in
NOT|involved_in		 IEA
ISO		 (PMID:21658587) Ensembl
BHF-UCL		 PMID:21658587 GO_REF:0000107 NCBI chr12:12,209,032...12,224,978
Ensembl chr12:12,208,231...12,224,965 		JBrowse link
G ZIC2 Zic family member 2 involved_in ISO (PMID:13678579) UniProt PMID:13678579 NCBI chr22:49,948,743...49,952,007
Ensembl chr22:49,948,778...49,950,055 		JBrowse link
semaphorin-plexin signaling pathway involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,732,645...77,793,950
Ensembl chr 2:77,678,686...77,792,114 		JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
sensory neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GBX1 gastrulation brain homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23418536) Ensembl
MGI		 PMID:23418536 GO_REF:0000107 NCBI chr16:15,195,705...15,213,425 JBrowse link
G NRP1 neuropilin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:3,416,062...3,553,929
Ensembl chr 2:3,413,821...3,552,483 		JBrowse link
G NRP2 neuropilin 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chr37:14,293,545...14,408,984
Ensembl chr37:14,293,614...14,406,949 		JBrowse link
serotonergic neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 involved_in ISO (PMID:21106844) ParkinsonsUK-UCL PMID:21106844 NCBI chr20:40,457,430...40,495,128
Ensembl chr20:40,457,657...40,483,881 		JBrowse link
G FZD3 frizzled class receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851 		JBrowse link
G LOC111089960 protocadherin alpha-7 acts_upstream_of_or_within ISO (PMID:29162883) MGI PMID:29162883 NCBI chr 2:35,954,126...36,096,661
Ensembl chr 2:35,910,402...36,095,110 		JBrowse link
G VANGL2 VANGL planar cell polarity protein 2 involved_in ISO (PMID:21106844) ParkinsonsUK-UCL PMID:21106844 NCBI chr38:21,822,873...21,824,537 JBrowse link
spinal cord interneuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G EVX1 even-skipped homeobox 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:11239430) Ensembl
MGI		 PMID:11239430 GO_REF:0000107 NCBI chr14:40,416,167...40,422,412
Ensembl chr14:40,418,589...40,423,482 		JBrowse link
sympathetic neuron axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G ECE1 endothelin converting enzyme 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr 2:77,732,645...77,793,950
Ensembl chr 2:77,678,686...77,792,114 		JBrowse link
G EDN1 endothelin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chr35:11,808,892...11,815,383
Ensembl chr35:11,808,892...11,815,383 		JBrowse link
G EDNRA endothelin receptor type A involved_in IEA Ensembl GO_REF:0000107 NCBI chr15:45,823,472...45,878,527
Ensembl chr15:45,823,560...45,876,463 		JBrowse link
G MEF2C myocyte enhancer factor 2C involved_in ISO (PMID:30735130) MGI PMID:30735130 NCBI chr 3:19,778,997...19,948,203
Ensembl chr 3:19,779,007...19,943,852 		JBrowse link
G PLXNA4 plexin A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr14:4,683,569...5,110,113
Ensembl chr14:4,680,882...5,103,050 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 17100
    developmental process 6593
      anatomical structure morphogenesis 2870
        cell morphogenesis 1053
          cell morphogenesis involved in neuron differentiation 630
            axonogenesis 453
              axon guidance 195
                Roundabout signaling pathway involved in axon guidance 0
                VEGF-activated neuropilin signaling pathway involved in axon guidance 0
                anterior/posterior axon guidance + 5
                axon choice point recognition + 10
                axon extension involved in axon guidance + 22
                chemoattraction of axon + 4
                chemorepulsion of axon + 5
                commissural neuron axon guidance 16
                corticospinal neuron axon guidance + 2
                corticospinal neuron axon guidance through spinal cord 1
                corticospinal neuron axon guidance through the basilar pons 0
                corticospinal neuron axon guidance through the cerebral cortex 0
                corticospinal neuron axon guidance through the cerebral peduncle 0
                corticospinal neuron axon guidance through the internal capsule 0
                corticospinal neuron axon guidance through the medullary pyramid 0
                dopaminergic neuron axon guidance + 6
                dorsal/ventral axon guidance + 4
                interneuron axon guidance + 7
                motor neuron axon guidance + 32
                negative regulation of axon guidance + 1
                olfactory bulb axon guidance 1
                photoreceptor cell axon guidance + 0
                positive regulation of axon guidance + 3
                regulation of axon guidance + 12
                retinal ganglion cell axon guidance + 23
                semaphorin-plexin signaling pathway involved in axon guidance 4
                sensory neuron axon guidance + 3
                serotonergic neuron axon guidance + 5
                sympathetic neuron axon guidance 5
Path 2
Term Annotations click to browse term
  biological_process 17100
    developmental process 6593
      anatomical structure development 6201
        multicellular organism development 5048
          system development 4376
            nervous system development 2698
              neurogenesis 1985
                generation of neurons 1698
                  neuron differentiation 1619
                    neuron development 1329
                      neuron projection development 1157
                        neuron projection morphogenesis 690
                          neuron projection guidance 197
                            axon guidance 195
                              Roundabout signaling pathway involved in axon guidance 0
                              VEGF-activated neuropilin signaling pathway involved in axon guidance 0
                              anterior/posterior axon guidance + 5
                              axon choice point recognition + 10
                              axon extension involved in axon guidance + 22
                              chemoattraction of axon + 4
                              chemorepulsion of axon + 5
                              commissural neuron axon guidance 16
                              corticospinal neuron axon guidance + 2
                              corticospinal neuron axon guidance through spinal cord 1
                              corticospinal neuron axon guidance through the basilar pons 0
                              corticospinal neuron axon guidance through the cerebral cortex 0
                              corticospinal neuron axon guidance through the cerebral peduncle 0
                              corticospinal neuron axon guidance through the internal capsule 0
                              corticospinal neuron axon guidance through the medullary pyramid 0
                              dopaminergic neuron axon guidance + 6
                              dorsal/ventral axon guidance + 4
                              interneuron axon guidance + 7
                              motor neuron axon guidance + 32
                              negative regulation of axon guidance + 1
                              olfactory bulb axon guidance 1
                              photoreceptor cell axon guidance + 0
                              positive regulation of axon guidance + 3
                              regulation of axon guidance + 12
                              retinal ganglion cell axon guidance + 23
                              semaphorin-plexin signaling pathway involved in axon guidance 4
                              sensory neuron axon guidance + 3
                              serotonergic neuron axon guidance + 5
                              sympathetic neuron axon guidance 5
paths to the root