Welcome
{{ username}}
Message Center
{{ messageCount }} Messages
Go to Message Center
Watched Genes
{{$index + 1}}.
{{ watchedObject.symbol }} (RGD ID:{{watchedObject.rgdId}})
Modify Subscription
Unsubscribe
Watched Ontology Terms
{{$index + 1}}.
{{ watchedTerm.term }} ({{watchedTerm.accId}})
Modify Subscription
Unsubscribe
{{gene.symbol}}:
{{ gene.description }}
×
Save List to My RGD
Create Name:
Description:
You must be logged in to use this feature
{{ loginError }}
{{ watchLinkText }}
Select categories you would like to watch. Updates to this gene will be sent to {{ username }}
{{geneWatchAttr}}
Analyze
Gene
Strain
QTL
List
×
Gene Annotator (Functional Annotation)
unavailable
Gene Annotator (Annotation Distribution)
unavailable
Variant Visualizer (Genomic Variants)
unavailble
Variant Visualizer (Genomic Variants)
unavailable
Gene Annotator (Functional Annotation)
Gene Annotator (Annotation Distribution)
Variant Visualizer (Genomic Variants)
InterViewer (Protein-Protein Interactions)
unavailable
Gviewer (Genome Viewer)
unavailable
Variant Visualizer (Damaging Variants) unavailble
Variant Visualizer (Damaging Variants)
unavailable
InterViewer (Protein-Protein Interactions)
GViewer (Genome Viewer)
Variant Visualizer (Damaging Variants)
Gene Annotator (Annotation Comparison)
unavailable
OLGA (Gene List Generator)
unavailable
Gene Annotator (Annotation Comparison)
OLGA (Gene List Generator)
Excel (Download)
MOET (Multi-Ontology Enrichement)
unavailable
GOLF (Gene-Ortholog Location Finder)
unavailable
MOET (Multi-Ontology Enrichement)
GOLF (Gene-Ortholog Location Finder)
x
Send Message
x
Send us a Message
Your email
Message
Send
Submit Data
|
Help
|
Video Tutorials
|
News
|
Publications
|
Download
|
REST API
|
Citing RGD
|
Contact
Home
Search RGD
Grant Resources
Citing RGD
About Us
Contact Us
Data
Genes
Variants
Community Projects
QTLs
Strains
Markers
Genome Information
Ontologies
Cell Lines
References
Download
Submit Data
Analysis & Visualization
OntoMate (Literature Search)
JBrowse (Genome Browser)
Synteny Browser (VCMap)
Variant Visualizer
Multi-Ontology Enrichment (MOET)
Gene-Ortholog Location Finder (GOLF)
InterViewer (Protein-Protein Interactions)
PhenoMiner (Quatitative Phenotypes)
Gene Annotator
OLGA (Gene List Generator)
AllianceMine
GViewer (Genome Viewer)
Diseases
Aging & Age-Related Disease
Cancer & Neoplastic Disease
Cardiovascular Disease
Coronavirus Disease
Developmental Disease
Diabetes
Hematologic Disease
Immune & Inflammatory Disease
Infectious Disease
Liver Disease
Neurological Disease
Obesity & Metabolic Syndrome
Renal Disease
Respiratory Disease
Sensory Organ Disease
Phenotypes & Models
Find Models
new
Genetic Models
Autism Models
Rat PhenoMiner (Quantitative Phenotypes)
Chinchilla PhenoMiner
Expected Ranges (Quantitative Phenotype)
PhenoMiner Term Comparison
Hybrid Rat Diversity Panel
Phenotypes
Phenotypes in Other Animal Models
Animal Husbandry
Strain Medical Records
Phylogenetics
Strain Availability
Calendar
Rats 101
Submissions
Photo Archive
Pathways
Community
Rat Community Forum
Directory of Rat Laboratories
Video Tutorials
News
RGD Publications
RGD Presentations Archive
Nomenclature Guidelines
Resource Links
Laboratory Resources
Employment Resources
Advanced Search (OLGA)
ONTOLOGY REPORT - ANNOTATIONS
{{ watchLinkText }}
Term:
serotonergic neuron axon guidance
go back to main search page
Accession:
GO:0036515
browse the term
Definition:
The chemotaxis process that directs the migration of an axon growth cone of a serotonergic neuron to a specific target site in response to a combination of attractive and repulsive cues.
Synonyms:
exact_synonym:
5-HT axon guidance; serotonergic axon guidance
show annotations for term's descendants Sort by:
symbol
object name
position
reference
evidence
↑ asc
↓ desc
Rat (5)
Mouse (5)
Human (5)
Chinchilla (4)
Bonobo (6)
Dog (5)
Squirrel (5)
Pig (5)
Green Monkey (5)
Naked Mole-rat (4)
All
Genes (5)
serotonergic neuron axon guidance
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
CELSR3
cadherin EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
ParkinsonsUK-UCL
PMID:21106844
MGI:4866939
NCBI chr20:40,457,430...40,495,128
Ensembl chr20:40,457,657...40,483,881
G
FZD3
frizzled class receptor 3
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr25:28,969,126...29,075,763
Ensembl chr25:28,952,477...29,075,851
G
LOC111089960
protocadherin alpha-7
acts_upstream_of_or_within
ISO
(PMID:29162883)
MGI
PMID:29162883
NCBI chr 2:35,954,126...36,096,661
Ensembl chr 2:35,910,402...36,095,110
G
VANGL2
VANGL planar cell polarity protein 2
involved_in
ISO
(MGI:4866939|PMID:21106844)
ParkinsonsUK-UCL
PMID:21106844
MGI:4866939
NCBI chr38:21,822,873...21,824,537
chemoattraction of serotonergic neuron axon
Symbol
Object Name
Qualifiers
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
G
WNT5A
Wnt family member 5A
involved_in
IEA
Ensembl
GO_REF:0000107
NCBI chr20:34,756,430...34,790,937
Ensembl chr20:34,769,930...34,786,673
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
biological_process
17917
developmental process
6831
anatomical structure morphogenesis
3004
cell morphogenesis
1135
cell morphogenesis involved in neuron differentiation
706
axonogenesis
525
axon guidance
270
serotonergic neuron axon guidance
5
chemoattraction of serotonergic neuron axon
1
chemorepulsion of serotonergic neuron axon
0
Path 2
Term
Annotations
biological_process
17917
developmental process
6831
anatomical structure development
6414
multicellular organism development
5174
system development
4502
nervous system development
2788
neurogenesis
2078
generation of neurons
1795
neuron differentiation
1713
neuron development
1415
neuron projection development
1243
neuron projection morphogenesis
760
neuron projection guidance
270
axon guidance
270
serotonergic neuron axon guidance
5
chemoattraction of serotonergic neuron axon
1
chemorepulsion of serotonergic neuron axon
0