ONTOLOGY REPORT - ANNOTATIONS
Term: axon guidance
Accession: GO:0007411
browse the term
Definition: The chemotaxis process that directs the migration of an axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.
Synonyms: exact_synonym: axon pathfinding
narrow_synonym: axon growth cone guidance
related_synonym: axon chemotaxis
alt_id: GO:0008040
xref: Wikipedia:Axon_guidance
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Ablim1
actin-binding LIM protein 1
acts_upstream_of_or_within
ISO
(MGI:1928568|PMID:11163266)
RGD
PMID:11163266
MGI:1928568
NCBI chr 1:256,084,293...256,372,075
Ensembl chr 1:256,084,297...256,371,969
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Alcam
activated leukocyte cell adhesion molecule
acts_upstream_of_or_within
ISO
MGI:3056579 (MGI:3056232|PMID:15345243)
RGD
PMID:15345243
MGI:3056232
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
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Ank3
ankyrin 3
acts_upstream_of_or_within
ISO
MGI:2179751 (MGI:3510083|PMID:15479642)
RGD
PMID:15479642
MGI:3510083
NCBI chr20:18,602,267...19,225,831
Ensembl chr20:18,602,786...19,086,300
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Apbb1
amyloid beta precursor protein binding family B member 1
acts_upstream_of_or_within
ISO
MGI:108405 (MGI:3614238|PMID:16407979)
RGD
PMID:16407979
MGI:3614238
NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
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Apbb2
amyloid beta precursor protein binding family B member 2
acts_upstream_of_or_within
ISO
MGI:107765 (MGI:3614238|PMID:16407979)
RGD
PMID:16407979
MGI:3614238
NCBI chr14:41,557,918...41,878,622
Ensembl chr14:41,557,972...41,877,495
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Arhgap35
Rho GTPase activating protein 35
involved_in
ISS ISO
GO_REF:0000024 (MGI:1933687|PMID:11283609)
UniProt RGD
PMID:11283609
GO_REF:0000024 MGI:1933687
NCBI chr 1:77,202,436...77,319,298
Ensembl chr 1:77,202,436...77,319,298
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Arhgef25
Rho guanine nucleotide exchange factor 25
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:63,005,938...63,013,325
Ensembl chr 7:63,005,940...63,013,719
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Artn
artemin
acts_upstream_of_or_within
ISO
MGI:2183554 (MGI:2183092|PMID:12160745)
RGD
PMID:12160745
MGI:2183092
NCBI chr 5:131,458,596...131,470,193
Ensembl chr 5:131,464,756...131,468,025
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Arx
aristaless related homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2679972 (MGI:3574008|PMID:15677725), (MGI:3709215|PMID:17460091)
Ensembl RGD
PMID:15677725 PMID:17460091
GO_REF:0000107 MGI:3574008 MGI:3709215
NCBI chr X:58,016,233...58,028,149
Ensembl chr X:58,016,233...58,028,142
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Atoh1
atonal bHLH transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2155984 (MGI:3607238|PMID:16145671)
RGD
PMID:16145671
MGI:3607238
NCBI chr 4:93,912,068...93,914,163
Ensembl chr 4:93,912,068...93,914,154
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B3gnt2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
acts_upstream_of_or_within
ISO
MGI:3576265 (MGI:3575344|PMID:15728829), (MGI:5528450|PMID:23006775)
RGD
PMID:15728829 PMID:23006775
MGI:3575344 MGI:5528450
NCBI chr14:96,808,473...96,833,674
Ensembl chr14:96,806,664...96,835,273
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B4gat1
beta-1,4-glucuronyltransferase 1
acts_upstream_of_or_within
ISO
MGI:5470461 (MGI:5470500|PMID:23217742)
RGD
PMID:23217742
MGI:5470500
NCBI chr 1:202,343,268...202,345,490
Ensembl chr 1:202,343,240...202,346,065
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Bdnf
brain-derived neurotrophic factor
acts_upstream_of_or_within
ISO
MGI:1929986 (MGI:3629534|PMID:15014133)
RGD
PMID:15014133
MGI:3629534
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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Bmp7
bone morphogenetic protein 7
acts_upstream_of_or_within
ISO
(MGI:2662055|PMID:12741987)
RGD
PMID:12741987
MGI:2662055
NCBI chr 3:161,639,915...161,716,938
Ensembl chr 3:161,516,462...161,716,788
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Boc
BOC cell adhesion associated, oncogene regulated
acts_upstream_of_or_within involved_in
ISO IBA
MGI:3692939 (MGI:3691957|PMID:17086203) PMID:21873635
RGD
PMID:17086203 PMID:21873635
MGI:3691957 , RGD:13792537
NCBI chr11:56,122,697...56,198,060
Ensembl chr11:56,122,750...56,198,059
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Bsg
basigin (Ok blood group)
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 7:9,993,170...10,000,387
Ensembl chr 7:9,993,170...10,000,387
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Cdh4
cadherin 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:2679739|PMID:14586016)
Ensembl RGD
PMID:14586016
GO_REF:0000107 MGI:2679739
NCBI chr 3:166,525,098...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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Cdk5r1
cyclin-dependent kinase 5 regulatory subunit 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:1347398|PMID:10545161)
UniProt RGD
PMID:10545161
GO_REF:0000024 MGI:1347398
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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Chl1
cell adhesion molecule L1-like
acts_upstream_of_or_within
ISO
MGI:2429688 (MGI:2389546|PMID:12391163)
RGD
PMID:12391163
MGI:2389546
NCBI chr 4:136,291,504...136,505,830
Ensembl chr 4:136,291,463...136,503,265
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Cntn1
contactin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:123,263,146...123,560,896
Ensembl chr 7:123,372,792...123,558,541
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Cntn2
contactin 2
involved_in acts_upstream_of_or_within
IEA IBA ISO
GO_REF:0000107 PMID:21873635 MGI:107558|MGI:2677610|MGI:96721 (MGI:3801368|PMID:18550718)
Ensembl RGD
PMID:18550718 PMID:21873635
GO_REF:0000107 MGI:3801368 , RGD:13792537
NCBI chr13:43,942,868...43,975,973
Ensembl chr13:43,947,265...43,975,887
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Cntn4
contactin 4
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:138,624,584...139,622,499
Ensembl chr 4:139,099,152...139,621,090
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Cntn5
contactin 5
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:6,735,715...7,967,727
Ensembl chr 8:6,738,239...7,967,957
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Crppa
CDP-L-ribitol pyrophosphorylase A
acts_upstream_of_or_within
ISO
MGI:5470460 (MGI:5470500|PMID:23217742)
RGD
PMID:23217742
MGI:5470500
NCBI chr 6:53,120,264...53,397,030
Ensembl chr 6:53,121,438...53,397,028
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Csf1r
colony stimulating factor 1 receptor
involved_in
IEA ISO
GO_REF:0000107 (MGI:5430247|PMID:22542597)
Ensembl RGD
PMID:22542597
GO_REF:0000107 MGI:5430247
NCBI chr18:54,546,673...54,590,418
Ensembl chr18:54,546,659...54,590,415
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Cxcl12
C-X-C motif chemokine ligand 12
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
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Cyfip1
cytoplasmic FMR1 interacting protein 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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Cyfip2
cytoplasmic FMR1 interacting protein 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:30,621,318...30,741,113
Ensembl chr10:30,621,318...30,741,113
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Dag1
dystroglycan 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
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Dcc
DCC netrin 1 receptor
involved_in
IMP IBA
PMID:21873635
RGD GO_Central
PMID:8861902 PMID:21873635
RGD:729062 , RGD:13792537
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
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Dlx5
distal-less homeobox 5
acts_upstream_of_or_within
ISO
MGI:2180475 (MGI:3722740|PMID:17804636)
RGD
PMID:17804636
MGI:3722740
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
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Draxin
dorsal inhibitory axon guidance protein
involved_in
ISO IBA
(MGI:3832346|PMID:19150847) PMID:21873635
RGD
PMID:19150847 PMID:21873635
MGI:3832346 , RGD:13792537
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
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Drgx
dorsal root ganglia homeobox
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2182636 (MGI:2670488|PMID:12917357)
Ensembl RGD
PMID:12917357
GO_REF:0000107 MGI:2670488
NCBI chr16:7,854,849...7,884,404
Ensembl chr16:7,854,849...7,900,600
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Dscam
DS cell adhesion molecule
involved_in
ISS IBA IEA ISO
GO_REF:0000024 PMID:21873635 GO_REF:0000002 UniProtKB:O08747 (MGI:6274971|PMID:22685302)
UniProt InterPro RGD
PMID:22685302 PMID:21873635
GO_REF:0000002 GO_REF:0000024 MGI:6274971 , RGD:13792537
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
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Dscaml1
DS cell adhesion molecule-like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:45,740,298...46,057,322
Ensembl chr 8:45,740,298...46,057,320
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Dvl1
dishevelled segment polarity protein 1
acts_upstream_of_or_within
ISO
(MGI:3806438|PMID:18716223)
RGD
PMID:18716223
MGI:3806438
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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Edn3
endothelin 3
involved_in
ISO
MGI:1857160 (MGI:3784120|PMID:18401410)
RGD
PMID:18401410
MGI:3784120
NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
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Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857473 (MGI:3784120|PMID:18401410)
RGD
PMID:18401410
MGI:3784120
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
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Efna1
ephrin A1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:174,681,676...174,690,306
Ensembl chr 2:174,681,682...174,690,866
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Efna2
ephrin A2
involved_in
IEP IBA
PMID:21873635
RGD GO_Central
PMID:17328773 PMID:21873635
RGD:2301727 , RGD:13792537
NCBI chr 7:9,515,635...9,528,071
Ensembl chr 7:9,516,429...9,527,061
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Efna3
ephrin A3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:174,729,192...174,738,111
Ensembl chr 2:174,729,764...174,738,736
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Efna4
ephrin A4
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:174,748,729...174,752,979
Ensembl chr 2:174,748,724...174,752,979
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Efna5
ephrin A5
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:2429768 (MGI:1261388|PMID:9614241), (MGI:1931133|PMID:11222144)
RGD
PMID:9614241 PMID:11222144 PMID:21873635
MGI:1261388 MGI:1931133 , RGD:13792537
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
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Efnb1
ephrin B1
acts_upstream_of_or_within involved_in
TAS ISO IEA IBA
(MGI:2153438|PMID:11731465) GO_REF:0000107 PMID:21873635
RGD Ensembl
PMID:11731465 PMID:12139920 PMID:21873635
GO_REF:0000107 MGI:2153438 , RGD:727396 , RGD:13792537
NCBI chr X:64,257,351...64,270,158
Ensembl chr X:64,257,351...64,270,157
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Efnb2
ephrin B2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
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Efnb3
ephrin B3
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:2388046 (MGI:2153438|PMID:11731465), (MGI:2653388|PMID:12649481)
RGD
PMID:11731465 PMID:12649481 PMID:21873635
MGI:2153438 MGI:2653388 , RGD:13792537
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
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Emb
embigin
involved_in
IEA IBA
GO_REF:0000002 PMID:21873635
InterPro
PMID:21873635
GO_REF:0000002, RGD:13792537
NCBI chr 2:49,070,509...49,125,042
Ensembl chr 2:49,069,087...49,125,050
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Enah
ENAH, actin regulator
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:109268|MGI:3056050 (MGI:1331576|PMID:10069337), (MGI:3054149|PMID:15371503)
RGD
PMID:10069337 PMID:15371503 PMID:21873635
MGI:1331576 MGI:3054149 , RGD:13792537
NCBI chr13:93,617,751...93,738,119
Ensembl chr13:93,626,944...93,740,955
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Epha10
EPH receptor A10
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:137,139,588...137,175,637
Ensembl chr 5:137,140,735...137,174,157
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Epha3
Eph receptor A3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
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Epha4
Eph receptor A4
acts_upstream_of_or_within involved_in
ISO IBA
MGI:2654411|MGI:2679336 (MGI:2653388|PMID:12649481), (MGI:5464968|PMID:23144223) PMID:21873635
RGD
PMID:12649481 PMID:23144223 PMID:21873635
MGI:2653388 MGI:5464968 , RGD:13792537
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
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Epha5
EPH receptor A5
involved_in
ISS IBA ISO
GO_REF:0000024 PMID:21873635 (MGI:2384261|PMID:12124402)
UniProt RGD
PMID:12124402 PMID:21873635
GO_REF:0000024 MGI:2384261 , RGD:13792537
NCBI chr14:23,653,393...24,020,135
Ensembl chr14:23,653,393...24,017,317
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Epha6
Eph receptor A6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:39,757,870...40,708,901
Ensembl chr11:39,757,181...40,698,311
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Epha7
Eph receptor A7
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
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Epha8
Eph receptor A8
involved_in
IEA ISO ISS
GO_REF:0000107 (MGI:892883|PMID:9214628) GO_REF:0000024
Ensembl RGD UniProt
PMID:9214628
GO_REF:0000024 GO_REF:0000107 MGI:892883
NCBI chr 5:149,166,107...149,193,498
Ensembl chr 5:149,166,697...149,193,399
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Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS IBA ISO
GO_REF:0000024 PMID:21873635 MGI:2677305|MGI:2677312 (MGI:2149059|PMID:11532925), (MGI:2675767|PMID:12971893), (MGI:3716012|PMID:16701205), (MGI:5604297|PMID:24997765)
UniProt RGD
PMID:11532925 PMID:12971893 PMID:16701205 PMID:24997765 PMID:21873635
GO_REF:0000024 MGI:2149059 MGI:2675767 MGI:3716012 MGI:5604297 , RGD:13792537
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
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Ephb2
Eph receptor B2
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:2149059|PMID:11532925) PMID:21873635 (MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
RGD
PMID:8947026 PMID:10839360 PMID:11532925 PMID:21873635
MGI:1859095 MGI:2149059 MGI:84499 , RGD:13792537
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
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Ephb3
Eph receptor B3
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:2149059|PMID:11532925) PMID:21873635 (MGI:1859095|PMID:10839360), (MGI:84499|PMID:8947026)
RGD
PMID:8947026 PMID:10839360 PMID:11532925 PMID:21873635
MGI:1859095 MGI:2149059 MGI:84499 , RGD:13792537
NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
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Ephb6
Eph receptor B6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:70,491,973...70,507,230
Ensembl chr 4:70,491,973...70,507,230
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Etv1
ETS variant transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2384493|MGI:2384496 (MGI:2183841|PMID:10850491)
RGD
PMID:10850491
MGI:2183841
NCBI chr 6:55,590,149...55,681,784
Ensembl chr 6:55,590,234...55,681,775
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Evl
Enah/Vasp-like
involved_in
NAS
PMID:9268706
UniProt
PMID:9268706
RGD:728214
NCBI chr 6:127,473,119...127,594,342
Ensembl chr 6:127,474,543...127,594,344
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Ext1
exostosin glycosyltransferase 1
acts_upstream_of_or_within acts_upstream_of_or_within_positive_effect
ISO
MGI:1315205|MGI:2176173|MGI:2682061 (MGI:2679928|PMID:14605369), (MGI:5311271|PMID:21743013)
RGD
PMID:14605369 PMID:21743013
MGI:2679928 MGI:5311271
NCBI chr 7:84,375,769...84,654,625
Ensembl chr 7:84,375,784...84,655,357
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Fezf1
Fez family zinc finger 1
acts_upstream_of_or_within
ISO
(MGI:3621093|PMID:16540508)
RGD
PMID:16540508
MGI:3621093
NCBI chr 4:51,762,751...51,766,078
Ensembl chr 4:51,762,751...51,766,078
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Flrt2
fibronectin leucine rich transmembrane protein 2
acts_upstream_of_or_within
ISO
MGI:2389364 (MGI:5486433|PMID:21673655)
RGD
PMID:21673655
MGI:5486433
NCBI chr 6:114,777,547...114,872,688
Ensembl chr 6:114,777,599...114,872,785
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Flrt3
fibronectin leucine rich transmembrane protein 3
involved_in acts_upstream_of_or_within
ISO IGI
(MGI:5688822|PMID:24560577) PMID:21673655
RGD
PMID:24560577 PMID:21673655
MGI:5688822 , RGD:8554719
NCBI chr 3:127,994,491...128,008,137
Ensembl chr 3:127,994,226...128,007,841
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Foxd1
forkhead box D1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180362 (MGI:3512698|PMID:15509772)
Ensembl RGD
PMID:15509772
GO_REF:0000107 MGI:3512698
NCBI chr 2:29,702,558...29,704,978
Ensembl chr 2:29,702,558...29,704,978
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Gap43
growth associated protein 43
acts_upstream_of_or_within
ISO
MGI:2448337 (MGI:1353240|PMID:10662636)
RGD
PMID:10662636
MGI:1353240
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
G
Gas1
growth arrest-specific 1
acts_upstream_of_or_within
ISO
MGI:3711070 (MGI:3710451|PMID:17504941)
RGD
PMID:17504941
MGI:3710451
NCBI chr17:4,482,014...4,485,155
G
Gata3
GATA binding protein 3
acts_upstream_of_or_within
ISO
MGI:2181200 (MGI:1928163|PMID:11135239)
RGD
PMID:11135239
MGI:1928163
NCBI chr17:68,643,760...68,666,000
Ensembl chr17:68,643,873...68,665,391
G
Gbx2
gastrulation brain homeobox 2
acts_upstream_of_or_within
ISO
MGI:1857634 (MGI:2179161|PMID:11967891)
RGD
PMID:11967891
MGI:2179161
NCBI chr 9:90,509,633...90,512,212
Ensembl chr 9:90,509,633...90,512,212
G
Gdf7
growth differentiation factor 7
acts_upstream_of_or_within
ISO
(MGI:2662801|PMID:12639970)
RGD
PMID:12639970
MGI:2662801
NCBI chr 6:31,171,495...31,182,447
Ensembl chr 6:31,178,119...31,182,447
G
Gfra3
GDNF family receptor alpha 3
acts_upstream_of_or_within
ISO
MGI:2136781|MGI:2183558 (MGI:1344239|PMID:10482239), (MGI:2183092|PMID:12160745)
RGD
PMID:10482239 PMID:12160745
MGI:1344239 MGI:2183092
NCBI chr18:26,297,828...26,326,105
Ensembl chr18:26,297,829...26,326,105
G
Gli2
GLI family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:1857509 (MGI:1340208|PMID:10409510)
RGD
PMID:10409510
MGI:1340208
NCBI chr13:29,946,809...30,163,901
Ensembl chr13:29,946,809...30,163,574
G
Gli3
GLI family zinc finger 3
acts_upstream_of_or_within
ISO
MGI:1856276|MGI:1856282 (MGI:3628676|PMID:15065125), (MGI:4837563|PMID:20943929)
RGD
PMID:15065125 PMID:20943929
MGI:3628676 MGI:4837563
NCBI chr17:49,438,567...49,709,712
Ensembl chr17:49,438,567...49,709,712
G
Hmcn1
hemicentin 1
involved_in
IEA
GO_REF:0000108
GOC
GO_REF:0000108
NCBI chr13:62,615,461...63,084,524
Ensembl chr13:62,615,461...63,084,524
G
Kalrn
kalirin, RhoGEF kinase
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:66,198,155...66,803,166
Ensembl chr11:66,198,173...66,797,610
G
Kif5a
kinesin family member 5A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:63,051,894...63,089,024
Ensembl chr 7:63,049,424...63,092,858
G
Kif5b
kinesin family member 5B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
G
Klf7
KLF transcription factor 7
acts_upstream_of_or_within
ISO
MGI:3581890 (MGI:3581378|PMID:15964824)
RGD
PMID:15964824
MGI:3581378
NCBI chr 9:65,437,535...65,484,720 NCBI chr 9:65,433,683...65,526,372
Ensembl chr 9:65,437,167...65,526,261
G
L1cam
L1 cell adhesion molecule
involved_in acts_upstream_of_or_within
ISO IEA ISS
(PMID:24155914) MGI:104518|MGI:107558|MGI:1857443 (MGI:2449891|PMID:12533613), (MGI:3801368|PMID:18550718), (MGI:3804601|PMID:18650339) GO_REF:0000107 GO_REF:0000024
RGD Ensembl UniProt
PMID:12533613 PMID:18550718 PMID:18650339 PMID:24155914
GO_REF:0000024 GO_REF:0000107 MGI:2449891 MGI:3801368 MGI:3804601
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
G
Lama1
laminin subunit alpha 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:107,692,770...107,816,847
Ensembl chr 9:107,692,770...107,817,478
G
Lama2
laminin subunit alpha 2
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:109613 (MGI:3850905|PMID:19295126)
RGD
PMID:19295126 PMID:21873635
MGI:3850905 , RGD:13792537
NCBI chr 1:17,672,675...18,320,641
Ensembl chr 1:17,672,536...18,320,530
G
Lama5
laminin subunit alpha 5
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:167,270,296...167,318,370
Ensembl chr 3:167,270,296...167,318,451
G
Lamb2
laminin subunit beta 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:109613 (MGI:3850905|PMID:19295126)
Ensembl RGD
PMID:19295126
GO_REF:0000107 MGI:3850905
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
G
Lgi1
leucine-rich, glioma inactivated 1
involved_in
ISO
(PMID:20463223)
RGD
PMID:20463223
NCBI chr 1:236,043,376...236,084,270
Ensembl chr 1:236,042,954...236,084,616
G
Lgr4
leucine-rich repeat-containing G protein-coupled receptor 4
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:96,447,385...96,550,006
Ensembl chr 3:96,447,858...96,548,899
G
Lgr6
leucine-rich repeat-containing G protein-coupled receptor 6
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr13:46,424,382...46,544,074
Ensembl chr13:46,424,383...46,543,945
G
Lhx2
LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:5319439|PMID:22457488) MGI:1890208 (MGI:3714686|PMID:17493606)
Ensembl RGD
PMID:17493606 PMID:22457488
GO_REF:0000107 MGI:3714686 MGI:5319439
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
G
Lmx1a
LIM homeobox transcription factor 1 alpha
acts_upstream_of_or_within
ISO
MGI:1888413 (MGI:3051929|PMID:15183721)
RGD
PMID:15183721
MGI:3051929
NCBI chr13:79,834,614...79,978,253
Ensembl chr13:79,835,019...79,978,253
G
Lrtm2
leucine-rich repeats and transmembrane domains 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:152,485,863...152,508,248
Ensembl chr 4:152,485,866...152,500,377
G
Mapk8ip3
mitogen-activated protein kinase 8 interacting protein 3
acts_upstream_of_or_within
ISO
MGI:3527900 (MGI:3527288|PMID:15572149)
RGD
PMID:15572149
MGI:3527288
NCBI chr10:13,918,417...13,958,335
Ensembl chr10:13,918,400...13,958,273
G
Matn2
matrilin 2
acts_upstream_of_or_within
ISO
MGI:99912|MGI:99916 (MGI:3850905|PMID:19295126)
RGD
PMID:19295126
MGI:3850905
NCBI chr 7:65,494,996...65,644,613
Ensembl chr 7:65,494,834...65,645,113
G
Megf8
multiple EGF-like-domains 8
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Megf9
multiple EGF-like-domains 9
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 5:83,993,565...84,105,622
Ensembl chr 5:83,993,565...84,105,622
G
Mycbp2
MYC binding protein 2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Myh10
myosin heavy chain 10
acts_upstream_of_or_within
ISO
MGI:2386445 (MGI:3581503|PMID:15880105)
RGD
PMID:15880105
MGI:3581503
NCBI chr10:53,393,901...53,525,174
Ensembl chr10:53,394,389...53,525,165
G
Myot
myotilin
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr18:36,705,244...36,724,849
Ensembl chr18:36,705,314...36,724,841
G
Nectin1
nectin cell adhesion molecule 1
IMP
RGD
PMID:15328010
RGD:1599806
NCBI chr 8:44,101,776...44,164,863
Ensembl chr 8:44,101,776...44,189,787
G
Neo1
neogenin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:59,273,860...59,426,486
Ensembl chr 8:59,275,569...59,430,348
G
Neurog2
neurogenin 2
acts_upstream_of_or_within
ISO
MGI:2159010 (MGI:2670323|PMID:12895419), (MGI:3056020|PMID:15328020)
RGD
PMID:12895419 PMID:15328020
MGI:2670323 MGI:3056020
NCBI chr 2:216,092,641...216,095,276
Ensembl chr 2:216,093,363...216,094,154
G
Nexn
nexilin (F actin binding protein)
involved_in
IEA IBA
GO_REF:0000002 PMID:21873635
InterPro
PMID:21873635
GO_REF:0000002, RGD:13792537
NCBI chr 2:241,186,783...241,218,315
Ensembl chr 2:241,186,790...241,218,342
G
Nfasc
neurofascin
acts_upstream_of_or_within involved_in
ISO IBA
(MGI:3510083|PMID:15479642) PMID:21873635
RGD
PMID:15479642 PMID:21873635
MGI:3510083 , RGD:13792537
NCBI chr13:43,997,223...44,183,863
Ensembl chr13:43,997,224...44,183,880
G
Ngfr
nerve growth factor receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857226 (MGI:2178912|PMID:11978834)
Ensembl RGD
PMID:11978834
GO_REF:0000107 MGI:2178912
NCBI chr10:80,515,287...80,533,518
Ensembl chr10:80,515,299...80,533,518
G
Nkx2-1
NK2 homeobox 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1857494 (MGI:2157787|PMID:11830575)
Ensembl RGD
PMID:11830575
GO_REF:0000107 MGI:2157787
NCBI chr 6:73,996,601...74,001,483
Ensembl chr 6:73,996,601...73,999,791
G
Nog
noggin
acts_upstream_of_or_within
ISO
MGI:1862000 (MGI:3653290|PMID:12435358)
RGD
PMID:12435358
MGI:3653290
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Notch3
notch receptor 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:11,132,984...11,184,025
Ensembl chr 7:11,133,706...11,184,025
G
Nptn
neuroplastin
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 8:58,996,876...59,063,402
Ensembl chr 8:58,996,887...59,063,401
G
Nr4a3
nuclear receptor subfamily 4, group A, member 3
acts_upstream_of_or_within
ISO
MGI:3037444 (MGI:3056852|PMID:15456880)
RGD
PMID:15456880
MGI:3056852
NCBI chr 5:62,361,588...62,401,489
Ensembl chr 5:62,361,822...62,402,733
G
Nrcam
neuronal cell adhesion molecule
involved_in
ISO IBA
(MGI:2447374|PMID:12182881) PMID:21873635
RGD
PMID:12182881 PMID:21873635
MGI:2447374 , RGD:13792537
NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
G
Nrp1
neuropilin 1
acts_upstream_of_or_within involved_in
ISO IEA IBA
MGI:1857853|MGI:3512099 (MGI:3505728|PMID:12852851), (MGI:3525900|PMID:15604101), (MGI:3578029|PMID:15814794) GO_REF:0000002 PMID:21873635
RGD InterPro
PMID:12852851 PMID:15604101 PMID:15814794 PMID:21873635
GO_REF:0000002 MGI:3505728 MGI:3525900 MGI:3578029 , RGD:13792537
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in acts_upstream_of_or_within
IEP IBA IEA ISO
PMID:21873635 GO_REF:0000002 (MGI:3578029|PMID:15814794)
InterPro RGD
PMID:15814794 PMID:9288754 PMID:21873635
GO_REF:0000002 MGI:3578029 , RGD:633436 , RGD:13792537
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Ntf3
neurotrophin 3
acts_upstream_of_or_within
ISO
MGI:1933844 (MGI:3576404|PMID:15550985), (MGI:80051|PMID:8861722)
RGD
PMID:8861722 PMID:15550985
MGI:3576404 MGI:80051
NCBI chr 4:158,914,984...158,984,453
Ensembl chr 4:158,914,957...158,984,596
G
Ntn1
netrin 1
acts_upstream_of_or_within
NAS ISO
MGI:1927548 (MGI:1861288|PMID:10908620), (MGI:2181259|PMID:12051827), (MGI:2654974|PMID:12679031), (MGI:3616408|PMID:16481423), (MGI:3691957|PMID:17086203), (MGI:3758130|PMID:17898206)
RGD
PMID:10908620 PMID:12051827 PMID:12679031 PMID:16481423 PMID:17086203 PMID:17898206 PMID:11356879 More...
MGI:1861288 MGI:2181259 MGI:2654974 MGI:3616408 MGI:3691957 MGI:3758130 , RGD:633501
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ntn3
netrin 3
NAS
RGD
PMID:11356879
RGD:633501
NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
G
Ntrk1
neurotrophic receptor tyrosine kinase 1
IMP
RGD
PMID:18344912
RGD:5684394
NCBI chr 2:173,236,961...173,253,806
Ensembl chr 2:173,236,963...173,253,770
G
Or10a4
olfactory receptor family 10 subfamily A member 4
acts_upstream_of_or_within
ISO
MGI:1923510 (MGI:5014119|PMID:21646512)
RGD
PMID:21646512
MGI:5014119
NCBI chr 1:160,957,099...160,958,046
Ensembl chr 1:160,953,530...160,958,974
G
Or8a1b
olfactory receptor family 8 subfamily A member 1B
acts_upstream_of_or_within
ISO
MGI:1923510 (MGI:5014119|PMID:21646512)
RGD
PMID:21646512
MGI:5014119
NCBI chr 8:37,434,903...37,435,832
Ensembl chr 8:37,434,551...37,439,746
G
Otx2
orthodenticle homeobox 2
involved_in
ISO IEA
(PMID:16267555) GO_REF:0000107
RGD Ensembl
PMID:16267555
GO_REF:0000107
NCBI chr15:21,942,233...21,953,034
Ensembl chr15:21,943,191...21,953,416
G
Palld
palladin, cytoskeletal associated protein
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr16:28,228,006...28,621,349
Ensembl chr16:27,981,354...28,621,337
G
Pax6
paired box 6
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1856158 (MGI:2179161|PMID:11967891), (MGI:2679739|PMID:14586016)
Ensembl RGD
PMID:11967891 PMID:14586016
GO_REF:0000107 MGI:2179161 MGI:2679739
NCBI chr 3:92,128,772...92,157,022
Ensembl chr 3:92,135,637...92,157,014
G
Pgrmc1
progesterone receptor membrane component 1
IEP
RGD
PMID:10656251
RGD:727289
NCBI chr X:115,832,865...115,841,060
Ensembl chr X:115,832,884...115,888,682
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Pla2g10
phospholipase A2, group X
acts_upstream_of_or_within
ISO
(PMID:15927955)
RGD
PMID:15927955
NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:2386961 (MGI:2152659|PMID:11683995)
RGD
PMID:11683995
MGI:2152659
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (MGI:3578029|PMID:15814794)
RGD
PMID:15814794
MGI:3578029
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:3582493 (MGI:1928568|PMID:11163266)
RGD
PMID:11163266
MGI:1928568
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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Ptpro
protein tyrosine phosphatase, receptor type, O
involved_in
ISS ISO IBA
GO_REF:0000024 (MGI:5306568|PMID:19800005) PMID:21873635
UniProt RGD
PMID:19800005 PMID:21873635
GO_REF:0000024 MGI:5306568 , RGD:13792537
NCBI chr 4:170,164,071...170,374,790
Ensembl chr 4:170,164,431...170,374,771
G
Rac1
Rac family small GTPase 1
acts_upstream_of_or_within
ISO
MGI:1932522|MGI:2663662 (MGI:3709518|PMID:17409253)
RGD
PMID:17409253
MGI:3709518
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Reln
reelin
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1856398 (MGI:3611655|PMID:16324103) GO_REF:0000024
Ensembl RGD UniProt
PMID:16324103
GO_REF:0000024 GO_REF:0000107 MGI:3611655
NCBI chr 4:12,736,177...13,162,956
Ensembl chr 4:12,736,130...13,162,211
G
Robo1
roundabout guidance receptor 1
acts_upstream_of_or_within
IDA ISO
MGI:3043142 (MGI:3040153|PMID:15084255), (MGI:3041390|PMID:15091338)
RGD
PMID:15084255 PMID:15091338 PMID:9458045
MGI:3040153 MGI:3041390 , RGD:61733
NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
G
Robo2
roundabout guidance receptor 2
acts_upstream_of_or_within
IDA ISO
MGI:3043127 (MGI:3041390|PMID:15091338)
RGD
PMID:15091338 PMID:10102268
MGI:3041390 , RGD:68763
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Robo3
roundabout guidance receptor 3
acts_upstream_of_or_within involved_in
ISO
MGI:1274781|MGI:3043150 (MGI:3040153|PMID:15084255), (MGI:3047174|PMID:15233918) (MGI:6316558|PMID:30843071)
RGD
PMID:15084255 PMID:15233918 PMID:30843071
MGI:3040153 MGI:3047174 MGI:6316558
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Ror1
receptor tyrosine kinase-like orphan receptor 1
involved_in
IEA
GO_REF:0000002
InterPro
GO_REF:0000002
NCBI chr 5:114,744,311...115,088,155
Ensembl chr 5:114,744,304...115,088,155
G
Rtn4r
reticulon 4 receptor
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:82,844,585...82,869,012
Ensembl chr11:82,844,309...82,869,466
G
Rtn4rl1
reticulon 4 receptor-like 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:60,043,246...60,116,977
Ensembl chr10:60,043,002...60,116,978
G
Runx3
RUNX family transcription factor 3
acts_upstream_of_or_within
ISO
MGI:2179229 (MGI:2387717|PMID:12352981)
RGD
PMID:12352981
MGI:2387717
NCBI chr 5:147,393,926...147,419,161
Ensembl chr 5:147,360,994...147,419,156
G
Ryk
receptor-like tyrosine kinase
involved_in
ISO ISS
(MGI:3625635|PMID:16723543), (MGI:4887339|PMID:16116452) GO_REF:0000024
RGD UniProt
PMID:16116452 PMID:16723543
GO_REF:0000024 MGI:3625635 MGI:4887339
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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Scn1b
sodium voltage-gated channel beta subunit 1
acts_upstream_of_or_within
ISO
MGI:3043422 (MGI:3778100|PMID:18354028)
RGD
PMID:18354028
MGI:3778100
NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
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Sema3a
semaphorin 3A
acts_upstream_of_or_within
ISO IGI
MGI:2158944|MGI:2449920 (MGI:3525900|PMID:15604101), (MGI:3578029|PMID:15814794), (MGI:3588545|PMID:15869472), (MGI:3653290|PMID:12435358), (MGI:3710026|PMID:17428830), (MGI:3711619|PMID:17417650) PMID:21068336
RGD
PMID:12435358 PMID:15604101 PMID:15814794 PMID:15869472 PMID:17417650 PMID:17428830 PMID:21068336 More...
MGI:3525900 MGI:3578029 MGI:3588545 MGI:3653290 MGI:3710026 MGI:3711619 , RGD:8554551
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3c
semaphorin 3C
involved_in
ISO
(MGI:5315341|PMID:17021275)
RGD
PMID:17021275
MGI:5315341
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
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Sema3f
semaphorin 3F
acts_upstream_of_or_within
ISO
(MGI:3653290|PMID:12435358) (PMID:15814794)
RGD
PMID:12435358 PMID:15814794
MGI:3653290
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
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Sema4f
ssemaphorin 4F
IDA
RGD
PMID:10051670
RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
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Sema5a
semaphorin 5A
acts_upstream_of_or_within
ISO
(MGI:2447390|PMID:12506007)
RGD
PMID:12506007
MGI:2447390
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
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Sema6a
semaphorin 6A
involved_in
ISO
(MGI:3607683|PMID:16205717)
RGD
PMID:16205717
MGI:3607683
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
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Sema6b
semaphorin 6B
involved_in
ISS ISO
GO_REF:0000024 (MGI:4454564|PMID:20484647)
UniProt RGD
PMID:20484647
GO_REF:0000024 MGI:4454564
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
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Sema6c
semaphorin 6C
IDA
RGD
PMID:10049528
RGD:69992
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
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Shh
sonic hedgehog signaling molecule
involved_in acts_upstream_of_or_within
IEA ISO ISS
GO_REF:0000107 MGI:1934268 (MGI:2654974|PMID:12679031), (MGI:2662556|PMID:12756179), (MGI:3628676|PMID:15065125) GO_REF:0000024
Ensembl RGD UniProt
PMID:12679031 PMID:12756179 PMID:15065125
GO_REF:0000024 GO_REF:0000107 MGI:2654974 MGI:2662556 MGI:3628676
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
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Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
ISO IBA
(PMID:11748139) PMID:21873635 MGI:105088|MGI:1315202|MGI:1315205 (MGI:2181259|PMID:12051827), (MGI:2678272|PMID:12954717), (MGI:3041390|PMID:15091338), (MGI:3621682|PMID:11804571)
RGD
PMID:11748139 PMID:11804571 PMID:12051827 PMID:12954717 PMID:15091338 PMID:21873635 More...
MGI:2181259 MGI:2678272 MGI:3041390 MGI:3621682 , RGD:13792537
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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Slit2
slit guidance ligand 2
involved_in acts_upstream_of_or_within
ISO
(PMID:11748139) MGI:1315202|MGI:1315203|MGI:2179460|MGI:894663 (MGI:2678272|PMID:12954717), (MGI:2679928|PMID:14605369), (MGI:2683853|PMID:12879062), (MGI:3041390|PMID:15091338), (MGI:3621682|PMID:11804571)
RGD
PMID:11748139 PMID:11804571 PMID:12879062 PMID:12954717 PMID:14605369 PMID:15091338 More...
MGI:2678272 MGI:2679928 MGI:2683853 MGI:3041390 MGI:3621682
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Slit3
slit guidance ligand 3
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 (MGI:2678272|PMID:12954717) (PMID:11748139)
RGD
PMID:11748139 PMID:12954717 PMID:21873635
MGI:2678272 , RGD:13792537
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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Smad4
SMAD family member 4
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2386393|MGI:4459942 (MGI:4940418|PMID:21300867)
Ensembl RGD
PMID:21300867
GO_REF:0000107 MGI:4940418
NCBI chr18:67,243,742...67,274,438
Ensembl chr18:67,243,742...67,274,438
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Tenm2
teneurin transmembrane protein 2
involved_in
ISO ISS
(PMID:21724987) GO_REF:0000024
RGD UniProt
PMID:21724987
GO_REF:0000024
NCBI chr10:20,480,662...21,706,415
Ensembl chr10:20,481,854...21,705,597
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Tgfb2
transforming growth factor, beta 2
acts_upstream_of_or_within
ISO
MGI:1888389 (MGI:3522686|PMID:15528466)
RGD
PMID:15528466
MGI:3522686
NCBI chr13:98,160,075...98,261,771
Ensembl chr13:98,160,087...98,261,405
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Trio
trio Rho guanine nucleotide exchange factor
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:78,505,069...78,801,384
Ensembl chr 2:78,505,070...78,803,135
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Ttc8
tetratricopeptide repeat domain 8
acts_upstream_of_or_within
ISO
MGI:109148|MGI:1931271 (MGI:5014119|PMID:21646512)
RGD
PMID:21646512
MGI:5014119
NCBI chr 6:118,198,186...118,252,422
Ensembl chr 6:118,198,201...118,252,418
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Tubb3
tubulin, beta 3 class III
involved_in
IBA ISO ISS
PMID:21873635 (MGI:4441021|PMID:20074521), (MGI:5906064|PMID:28483977) GO_REF:0000024 (PMID:20074521)
RGD UniProt
PMID:20074521 PMID:28483977 PMID:21873635
GO_REF:0000024 MGI:4441021 MGI:5906064 , RGD:13792537
NCBI chr19:51,457,187...51,466,243
Ensembl chr19:51,457,184...51,466,243
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Unc5a
unc-5 netrin receptor A
involved_in
IDA IEA
GO_REF:0000117
UniProt RGD
PMID:9126742
GO_REF:0000117, RGD:634450
NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
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Unc5b
unc-5 netrin receptor B
involved_in acts_upstream_of_or_within
IDA IEA IGI
GO_REF:0000117 PMID:21673655
UniProt RGD
PMID:9126742 PMID:21673655
GO_REF:0000117, RGD:634450 , RGD:8554719
NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
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Unc5c
unc-5 netrin receptor C
involved_in acts_upstream_of_or_within
ISS IEA ISO
GO_REF:0000024 GO_REF:0000117 MGI:2679336 (MGI:5464968|PMID:23144223) UniProtKB:Q9ERC8 (MGI:6274971|PMID:22685302)
UniProt RGD
PMID:22685302 PMID:23144223
GO_REF:0000024 GO_REF:0000117 MGI:5464968 MGI:6274971
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
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Unc5d
unc-5 netrin receptor D
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3603594 (MGI:5486433|PMID:21673655) GO_REF:0000117
RGD UniProt
PMID:21673655
GO_REF:0000117 MGI:5486433
NCBI chr16:62,860,119...63,406,932
Ensembl chr16:62,860,174...63,401,143
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Usp33
ubiquitin specific peptidase 33
involved_in
ISO
(MGI:4418596|PMID:19706539)
RGD
PMID:19706539
MGI:4418596
NCBI chr 2:241,283,209...241,328,479
Ensembl chr 2:241,292,985...241,328,479
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Vasp
vasodilator-stimulated phosphoprotein
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:108360 (MGI:3054149|PMID:15371503)
RGD
PMID:15371503 PMID:21873635
MGI:3054149 , RGD:13792537
NCBI chr 1:78,910,009...78,925,791
Ensembl chr 1:78,910,011...78,925,061
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Vax1
ventral anterior homeobox 1
acts_upstream_of_or_within
ISO
MGI:1859863 (MGI:1350761|PMID:10601035)
RGD
PMID:10601035
MGI:1350761
NCBI chr 1:258,324,571...258,342,396
Ensembl chr 1:258,326,276...258,330,192
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Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(MGI:3806438|PMID:18716223)
RGD
PMID:18716223
MGI:3806438
NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
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Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(MGI:3806438|PMID:18716223)
RGD
PMID:18716223
MGI:3806438
NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
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Wnt5a
Wnt family member 5A
involved_in
ISO
(MGI:4949958|PMID:21483795)
RGD
PMID:21483795
MGI:4949958
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
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Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3807817|PMID:18479186)
Ensembl RGD
PMID:18479186
GO_REF:0000107 MGI:3807817
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
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Ntn1
netrin 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 (MGI:3807817|PMID:18479186)
Ensembl RGD
PMID:18479186
GO_REF:0000107 MGI:3807817
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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Unc5a
unc-5 netrin receptor A
involved_in acts_upstream_of_or_within
IBA ISO IEA
PMID:21873635 (MGI:3807817|PMID:18479186) GO_REF:0000107
RGD Ensembl
PMID:18479186 PMID:21873635
GO_REF:0000107 MGI:3807817 , RGD:13792537
NCBI chr17:9,614,841...9,670,558
Ensembl chr17:9,614,838...9,670,526
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Unc5b
unc-5 netrin receptor B
involved_in acts_upstream_of_or_within
IBA ISO IEA
PMID:21873635 (MGI:3807817|PMID:18479186) GO_REF:0000107
RGD Ensembl
PMID:18479186 PMID:21873635
GO_REF:0000107 MGI:3807817 , RGD:13792537
NCBI chr20:28,697,726...28,764,474
Ensembl chr20:28,697,726...28,764,537
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Unc5c
unc-5 netrin receptor C
acts_upstream_of_or_within
ISO
(MGI:3807817|PMID:18479186)
RGD
PMID:18479186
MGI:3807817
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
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Efnb3
ephrin B3
acts_upstream_of_or_within
ISO
MGI:3026700 (MGI:3026699|PMID:11182083)
RGD
PMID:11182083
MGI:3026699
NCBI chr10:54,274,506...54,281,951
Ensembl chr10:54,274,506...54,280,471
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Gap43
growth associated protein 43
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:2448337 (MGI:70834|PMID:7859286)
RGD
PMID:7859286 PMID:21873635
MGI:70834 , RGD:13792537
NCBI chr11:58,376,371...58,470,047
Ensembl chr11:58,376,371...58,470,045
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Alcam
activated leukocyte cell adhesion molecule
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
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Nrp1
neuropilin 1
involved_in acts_upstream_of
ISO
(MGI:5437554|PMID:22790009) (MGI:1289520|PMID:9753685)
RGD
PMID:9753685 PMID:22790009
MGI:1289520 MGI:5437554
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Nrp2
neuropilin 2
involved_in
ISO
(MGI:5437554|PMID:22790009)
RGD
PMID:22790009
MGI:5437554
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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Plxna3
plexin A3
acts_upstream_of
ISO
MGI:107558|MGI:1096347 (MGI:2152659|PMID:11683995)
RGD
PMID:11683995
MGI:2152659
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Ryk
receptor-like tyrosine kinase
acts_upstream_of
ISO
MGI:98958 (MGI:3625635|PMID:16723543)
RGD
PMID:16723543
MGI:3625635
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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Sema3a
semaphorin 3A
involved_in acts_upstream_of
ISO
(MGI:5437554|PMID:22790009) MGI:104518|MGI:107683|MGI:96721 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995), (MGI:3801368|PMID:18550718), (MGI:73216|PMID:7748561)
RGD
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009
MGI:1289520 MGI:2152659 MGI:3801368 MGI:5437554 MGI:73216
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3f
semaphorin 3F
involved_in acts_upstream_of
ISO
(MGI:5437554|PMID:22790009) MGI:107683 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995)
RGD
PMID:9753685 PMID:11683995 PMID:22790009
MGI:1289520 MGI:2152659 MGI:5437554
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
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Slit1
slit guidance ligand 1
involved_in
ISO IEA
(PMID:16840550) GO_REF:0000107
RGD Ensembl
PMID:16840550
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:16840550)
RGD
PMID:16840550
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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Slit3
slit guidance ligand 3
involved_in
ISO IEA
(PMID:16840550) GO_REF:0000107
RGD Ensembl
PMID:16840550
GO_REF:0000107
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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Smo
smoothened, frizzled class receptor
IMP
RGD
PMID:19447091
RGD:2324988
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
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Wnt5a
Wnt family member 5A
acts_upstream_of
ISO
MGI:101766 (MGI:3625635|PMID:16723543)
RGD
PMID:16723543
MGI:3625635
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
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App
amyloid beta precursor protein
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 MGI:2154522 (MGI:69837|PMID:8001115)
UniProt RGD
PMID:8001115
GO_REF:0000024 MGI:69837
NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
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Foxg1
forkhead box G1
acts_upstream_of_or_within
ISO
MGI:1857771 (MGI:3051707|PMID:15240555)
RGD
PMID:15240555
MGI:3051707
NCBI chr 6:66,674,797...66,677,611
Ensembl chr 6:66,666,587...66,678,607
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Robo1
roundabout guidance receptor 1
involved_in
IEA ISO IEP
GO_REF:0000002 UniProtKB:Q7TPD3 (MGI:3823169|PMID:18986510)
InterPro RGD
PMID:18986510 PMID:18986510
GO_REF:0000002 MGI:3823169 , RGD:2314842
NCBI chr11:10,580,863...11,621,672
Ensembl chr11:10,580,908...11,620,203
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Robo2
roundabout guidance receptor 2
involved_in
ISO
UniProtKB:O89026 (MGI:3823169|PMID:18986510)
RGD
PMID:18986510
MGI:3823169
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
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Robo3
roundabout guidance receptor 3
involved_in acts_upstream_of_or_within
ISO
(MGI:3823169|PMID:18986510) (MGI:3834283|PMID:18466743)
RGD
PMID:18466743 PMID:18986510
MGI:3823169 MGI:3834283
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
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Mycbp2
MYC binding protein 2
acts_upstream_of_or_within
ISO
MGI:3777464 (MGI:3776727|PMID:18031680)
RGD
PMID:18031680
MGI:3776727
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
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Nrp1
neuropilin 1
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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Plxna3
plexin A3
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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Plxna4
plexin A4
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
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Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
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Lrp1
LDL receptor related protein 1
IMP
RGD
PMID:26598525
RGD:11097297
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
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Lrp2
LDL receptor related protein 2
IMP
RGD
PMID:26598525
RGD:11097297
NCBI chr 3:54,189,305...54,346,769
Ensembl chr 3:54,189,308...54,346,708
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Robo3
roundabout guidance receptor 3
acts_upstream_of_or_within
ISO
(MGI:3834283|PMID:18466743)
RGD
PMID:18466743
MGI:3834283
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
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Wnt7b
Wnt family member 7B
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
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Wnt5a
Wnt family member 5A
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
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Ntn1
netrin 1
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5906064|PMID:28483977) GO_REF:0000107
UniProt RGD Ensembl
PMID:28483977
GO_REF:0000024 GO_REF:0000107 MGI:5906064
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
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Robo3
roundabout guidance receptor 3
acts_upstream_of_or_within
ISO
(MGI:3834283|PMID:18466743)
RGD
PMID:18466743
MGI:3834283
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Unc5c
unc-5 netrin receptor C
involved_in
ISS ISO
GO_REF:0000024 (MGI:5906064|PMID:28483977)
UniProt RGD
PMID:28483977
GO_REF:0000024 MGI:5906064
NCBI chr 2:230,180,353...230,535,219
Ensembl chr 2:230,180,951...230,535,217
G
Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (MGI:3578029|PMID:15814794)
RGD
PMID:15814794
MGI:3578029
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Ryk
receptor-like tyrosine kinase
involved_in
ISO
UniProtKB:P22725 (MGI:5707582|PMID:23517308)
RGD
PMID:23517308
MGI:5707582
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(MGI:4866939|PMID:21106844), (MGI:5707582|PMID:23517308)
RGD
PMID:21106844 PMID:23517308
MGI:4866939 MGI:5707582
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Adam17
ADAM metallopeptidase domain 17
involved_in
ISO
(PMID:36476876)
RGD
PMID:36476876
NCBI chr 6:40,872,936...40,920,700
Ensembl chr 6:40,872,856...40,920,639
G
Dag1
dystroglycan 1
acts_upstream_of_or_within
ISO
MGI:1934902 (MGI:5470500|PMID:23217742)
RGD
PMID:23217742
MGI:5470500
NCBI chr 8:108,890,926...108,955,611
Ensembl chr 8:108,890,929...108,952,325
G
Ephb2
Eph receptor B2
involved_in
ISO
(MGI:81675|PMID:8689685)
RGD
PMID:8689685
MGI:81675
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Fzd3
frizzled class receptor 3
acts_upstream_of_or_within
ISO
MGI:2388632 (MGI:2682446|PMID:14671310)
RGD
PMID:14671310
MGI:2682446
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Gdnf
glial cell derived neurotrophic factor
involved_in
IEA ISO
GO_REF:0000107 UniProtKB:P13595 (MGI:5440338|PMID:22998873)
Ensembl RGD
PMID:22998873
GO_REF:0000107 MGI:5440338
NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
G
Ncam1
neural cell adhesion molecule 1
involved_in
ISO
UniProtKB:P48540 (MGI:5440338|PMID:22998873)
RGD
PMID:22998873
MGI:5440338
NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
G
Nfib
nuclear factor I/B
involved_in
ISS ISO
GO_REF:0000024 (MGI:4453290|PMID:19961580)
UniProt RGD
PMID:19961580
GO_REF:0000024 MGI:4453290
NCBI chr 5:96,759,208...96,973,092
Ensembl chr 5:96,764,653...96,975,479
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ptch1
patched 1
IMP
RGD
PMID:19946319
RGD:12879429
NCBI chr17:1,542,705...1,607,730
Ensembl chr17:1,542,877...1,607,333
G
Robo3
roundabout guidance receptor 3
acts_upstream_of_or_within
ISO
(MGI:3834283|PMID:18466743)
RGD
PMID:18466743
MGI:3834283
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:2667542 (MGI:3625635|PMID:16723543)
RGD
PMID:16723543
MGI:3625635
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Shh
sonic hedgehog signaling molecule
IMP
RGD
PMID:19946319
RGD:12879429
NCBI chr 4:6,954,017...6,963,170
Ensembl chr 4:6,954,017...6,963,170
G
Smo
smoothened, frizzled class receptor
involved_in
IMP IBA
PMID:21873635
RGD GO_Central
PMID:19946319 PMID:21873635
RGD:12879429 , RGD:13792537
NCBI chr 4:58,344,101...58,372,828
Ensembl chr 4:58,343,529...58,373,829
G
Vegfa
vascular endothelial growth factor A
NOT|involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Scn1b
sodium voltage-gated channel beta subunit 1
acts_upstream_of_or_within involved_in
ISO IEA
MGI:3043422 (MGI:3778100|PMID:18354028) GO_REF:0000107
RGD Ensembl
PMID:18354028
GO_REF:0000107 MGI:3778100
NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:10975526)
RGD
PMID:10975526
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Lhx9
LIM homeobox 9
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr13:50,389,052...50,409,947
Ensembl chr13:50,389,738...50,410,806
G
Dcc
DCC netrin 1 receptor
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1934924 (MGI:3758130|PMID:17898206)
Ensembl RGD
PMID:17898206
GO_REF:0000107 MGI:3758130
NCBI chr18:64,868,987...65,972,783
Ensembl chr18:64,873,898...65,972,740
G
Fgf8
fibroblast growth factor 8
IMP
projection of trochlear axons through the isthmic organizer
RGD
PMID:12403710
RGD:2289355
NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
G
Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1315205 (MGI:3621682|PMID:11804571)
Ensembl RGD
PMID:11804571
GO_REF:0000107 MGI:3621682
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
acts_upstream_of_or_within
ISO
MGI:1315203|MGI:2179460 (MGI:3621682|PMID:11804571)
RGD
PMID:11804571
MGI:3621682
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Dlx5
distal-less homeobox 5
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2180475 (MGI:5774924|PMID:25937343)
Ensembl RGD
PMID:25937343
GO_REF:0000107 MGI:5774924
NCBI chr 4:34,999,139...35,003,504
Ensembl chr 4:34,999,139...35,003,407
G
Mir200a
microRNA 200a
acts_upstream_of_or_within
ISO
(MGI:5774924|PMID:25937343)
RGD
PMID:25937343
MGI:5774924
NCBI chr 5:166,648,494...166,648,582
G
Mir200b
microRNA 200b
acts_upstream_of_or_within
ISO
(MGI:5774924|PMID:25937343)
RGD
PMID:25937343
MGI:5774924
NCBI chr 5:166,649,272...166,649,366
Ensembl chr 5:166,649,272...166,649,366
G
Mir200c
microRNA 200c
acts_upstream_of_or_within
ISO
(MGI:5774924|PMID:25937343)
RGD
PMID:25937343
MGI:5774924
NCBI chr 4:157,523,679...157,523,747
G
Mir9-3
microRNA 9-3
acts_upstream_of_or_within
ISO
(MGI:5774924|PMID:25937343)
RGD
PMID:25937343
MGI:5774924
NCBI chr 1:133,440,049...133,440,138
G
Alcam
activated leukocyte cell adhesion molecule
acts_upstream_of_or_within
ISO
MGI:3056579 (MGI:3056232|PMID:15345243)
RGD
PMID:15345243
MGI:3056232
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Ark2c
arkadia C-terminal like ring finger ubiquitin ligase 2C
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:5516581 (MGI:5499270|PMID:23610558)
RGD
PMID:23610558 PMID:21873635
MGI:5499270 , RGD:13792537
NCBI chr18:70,984,566...71,100,836
Ensembl chr18:70,989,731...71,100,836
G
Cdk5
cyclin-dependent kinase 5
acts_upstream_of_or_within
ISO
MGI:1861809 (MGI:3607648|PMID:16203963)
RGD
PMID:16203963
MGI:3607648
NCBI chr 4:10,754,682...10,760,110
Ensembl chr 4:10,754,687...10,760,112
G
Chn1
chimerin 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:3767884|PMID:17785183)
UniProt RGD
PMID:17785183
GO_REF:0000024 MGI:3767884
NCBI chr 3:58,509,822...58,676,774
Ensembl chr 3:58,510,536...58,676,490
G
Cxcl12
C-X-C motif chemokine ligand 12
acts_upstream_of_or_within
ISO
MGI:1934384 (MGI:3590395|PMID:16129397)
RGD
PMID:16129397
MGI:3590395
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Cxcr4
C-X-C motif chemokine receptor 4
acts_upstream_of_or_within
ISO
MGI:1934442|MGI:3777572 (MGI:3590395|PMID:16129397), (MGI:3776727|PMID:18031680)
RGD
PMID:16129397 PMID:18031680
MGI:3590395 MGI:3776727
NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
G
Egr2
early growth response 2
acts_upstream_of_or_within
ISO
MGI:96170 (MGI:1306866|PMID:9806922)
RGD
PMID:9806922
MGI:1306866
NCBI chr20:21,051,270...21,056,322
Ensembl chr20:21,051,277...21,055,562
G
Epha3
Eph receptor A3
NOT|involved_in
ISO
(MGI:3703403|PMID:17046737)
RGD
PMID:17046737
MGI:3703403
NCBI chr11:1,138,485...1,474,102
Ensembl chr11:1,140,985...1,473,900
G
Epha4
Eph receptor A4
involved_in
ISS ISO
GO_REF:0000024 (MGI:3767884|PMID:17785183)
UniProt RGD
PMID:17785183
GO_REF:0000024 MGI:3767884
NCBI chr 9:78,815,460...78,958,139
Ensembl chr 9:78,815,460...78,958,139
G
Erbb2
erb-b2 receptor tyrosine kinase 2
acts_upstream_of_or_within
ISO
MGI:1929070 (MGI:1352956|PMID:10655525)
RGD
PMID:10655525
MGI:1352956
NCBI chr10:83,411,197...83,435,078
Ensembl chr10:83,411,313...83,435,078
G
Etv4
ETS variant transcription factor 4
acts_upstream_of_or_within
ISO
MGI:2387770 (MGI:2385981|PMID:12372283)
RGD
PMID:12372283
MGI:2385981
NCBI chr10:86,706,749...86,721,974
Ensembl chr10:86,706,749...86,721,974
G
Fgf8
fibroblast growth factor 8
IMP
projection of trochlear axons through the isthmic organizer
RGD
PMID:12403710
RGD:2289355
NCBI chr 1:244,584,477...244,590,359
Ensembl chr 1:244,584,652...244,590,359
G
Foxp1
forkhead box P1
involved_in
ISO
(MGI:4849611|PMID:20711475)
RGD
PMID:20711475
MGI:4849611
NCBI chr 4:131,559,599...132,155,092
Ensembl chr 4:131,564,756...132,112,258
G
Hoxa1
homeobox A1
acts_upstream_of_or_within
ISO
MGI:95296 (MGI:1306866|PMID:9806922)
RGD
PMID:9806922
MGI:1306866
NCBI chr 4:81,255,814...81,258,504
Ensembl chr 4:81,255,883...81,258,504
G
Hoxa2
homeobox A2
acts_upstream_of_or_within involved_in
ISO IEA
MGI:1857626 (MGI:1098901|PMID:9367425) GO_REF:0000107
RGD Ensembl
PMID:9367425
GO_REF:0000107 MGI:1098901
Ensembl chr 4:81,262,768...81,265,044
G
Kif5c
kinesin family member 5C
acts_upstream_of_or_within
ISO
MGI:1888955 (MGI:1888858|PMID:10964943)
RGD
PMID:10964943
MGI:1888858
NCBI chr 3:34,032,082...34,185,597
Ensembl chr 3:34,032,105...34,182,413
G
Lhx1
LIM homeobox 1
involved_in
ISS ISO
GO_REF:0000024 (MGI:4849611|PMID:20711475)
UniProt RGD
PMID:20711475
GO_REF:0000024 MGI:4849611
NCBI chr10:69,396,829...69,403,617
Ensembl chr10:69,396,829...69,403,617
G
Lhx3
LIM homeobox 3
acts_upstream_of_or_within
ISO
MGI:101776 (MGI:1316601|PMID:9865699)
RGD
PMID:9865699
MGI:1316601
NCBI chr 3:9,026,432...9,035,122
Ensembl chr 3:9,027,425...9,034,480
G
Lhx4
LIM homeobox 4
acts_upstream_of_or_within
ISO
MGI:102673 (MGI:1316601|PMID:9865699)
RGD
PMID:9865699
MGI:1316601
NCBI chr13:67,873,618...67,927,003
Ensembl chr13:67,877,109...67,927,003
G
Lmo4
LIM domain only 4
involved_in
ISO
UniProtKB:Q9QZW9 (MGI:7339313|PMID:18539116)
RGD
PMID:18539116
MGI:7339313
NCBI chr 2:233,264,180...233,280,881
Ensembl chr 2:233,264,182...233,280,880
G
Mnx1
motor neuron and pancreas homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182358|MGI:2182361|MGI:2182363 (MGI:1344237|PMID:10482234)
RGD
PMID:10482234
MGI:1344237
NCBI chr 4:5,866,506...5,871,465
Ensembl chr 4:5,866,506...5,871,465
G
Mycbp2
MYC binding protein 2
acts_upstream_of_or_within
ISO
MGI:3777464|MGI:3777465 (MGI:3776727|PMID:18031680)
RGD
PMID:18031680
MGI:3776727
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nog
noggin
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1862000 (MGI:3653290|PMID:12435358)
Ensembl RGD
PMID:12435358
GO_REF:0000107 MGI:3653290
NCBI chr10:74,128,712...74,130,339
Ensembl chr10:74,128,712...74,130,339
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Ntn1
netrin 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
G
Ntn3
netrin 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:13,236,905...13,240,001
Ensembl chr10:13,236,905...13,240,001
G
Plxna4
plexin A4
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Rac1
Rac family small GTPase 1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr12:11,037,028...11,057,251
Ensembl chr12:11,036,698...11,057,251
G
Rac3
Rac family small GTPase 3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr10:106,002,808...106,005,244
Ensembl chr10:105,993,087...106,005,260
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Slit1
slit guidance ligand 1
involved_in
ISO IEA
(PMID:16162649) GO_REF:0000107
RGD Ensembl
PMID:16162649
GO_REF:0000107
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:10102268)
RGD
PMID:10102268
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Hdac6
histone deacetylase 6
IMP
RGD
PMID:19884510
RGD:9681717
NCBI chr X:14,550,645...14,572,445
Ensembl chr X:14,551,044...14,572,441
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
IMP ISO
(MGI:1289520|PMID:9753685)
RGD
PMID:9753685 PMID:9288754
MGI:1289520 , RGD:633436
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna3
plexin A3
acts_upstream_of_or_within
ISO
MGI:107558|MGI:1096347 (MGI:2152659|PMID:11683995)
RGD
PMID:11683995
MGI:2152659
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Ryk
receptor-like tyrosine kinase
acts_upstream_of_or_within
ISO
MGI:98958 (MGI:3625635|PMID:16723543)
RGD
PMID:16723543
MGI:3625635
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Sema3a
semaphorin 3A
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:104518|MGI:107683|MGI:96721 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995), (MGI:3801368|PMID:18550718), (MGI:73216|PMID:7748561)
RGD
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:21873635
MGI:1289520 MGI:2152659 MGI:3801368 MGI:73216 , RGD:13792537
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3b
semaphorin 3B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:108,271,663...108,280,326
Ensembl chr 8:108,271,666...108,282,919
G
Sema3c
semaphorin 3C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:17,583,212...17,747,234
Ensembl chr 4:17,583,212...17,746,534
G
Sema3d
semaphorin 3D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:22,316,769...22,505,930
Ensembl chr 4:22,316,779...22,505,930
G
Sema3e
semaphorin 3E
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:20,297,534...20,555,287
Ensembl chr 4:20,299,718...20,555,229
G
Sema3f
semaphorin 3F
involved_in acts_upstream_of_or_within
IBA ISO
PMID:21873635 MGI:107683 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995)
RGD
PMID:9753685 PMID:11683995 PMID:21873635
MGI:1289520 MGI:2152659 , RGD:13792537
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Sema3g
semaphorin 3G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
G
Sema4a
semaphorin 4A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:173,896,432...173,917,903
Ensembl chr 2:173,896,439...173,914,442
G
Sema4b
semaphorin 4B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:134,136,646...134,177,777
Ensembl chr 1:134,149,536...134,177,775
G
Sema4c
semaphorin 4C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:38,791,668...38,802,171
Ensembl chr 9:38,791,670...38,802,128
G
Sema4d
semaphorin 4D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr17:13,430,324...13,537,146
Ensembl chr17:13,430,379...13,537,138
G
Sema4f
ssemaphorin 4F
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Sema4g
semaphorin 4G
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 1:243,849,979...243,865,343
Ensembl chr 1:243,853,854...243,865,341
G
Sema5a
semaphorin 5A
involved_in
IBA IMP
PMID:21873635 PMID:15603739
GO_Central UniProt
PMID:21873635 PMID:15603739
RGD:13792537 , RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Sema5b
semaphorin 5B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr11:65,102,031...65,225,456
Ensembl chr11:65,102,031...65,225,311
G
Sema6a
semaphorin 6A
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr18:40,050,623...40,171,954
Ensembl chr18:40,050,624...40,171,954
G
Sema6b
semaphorin 6B
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 9:950,939...967,905
Ensembl chr 9:950,939...961,521
G
Sema6c
semaphorin 6C
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
G
Sema6d
semaphorin 6D
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
G
Sema7a
semaphorin 7A (John Milton Hagen blood group)
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
G
Slit1
slit guidance ligand 1
IDA
RGD
PMID:15632296
RGD:1358459
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Wnt3
Wnt family member 3
acts_upstream_of_or_within
ISO
(MGI:3806438|PMID:18716223)
RGD
PMID:18716223
MGI:3806438
NCBI chr10:88,680,248...88,724,170
Ensembl chr10:88,680,248...88,724,099
G
Wnt3a
Wnt family member 3A
acts_upstream_of_or_within
ISO
(MGI:3806438|PMID:18716223)
RGD
PMID:18716223
MGI:3806438
NCBI chr10:44,034,174...44,078,463
Ensembl chr10:44,034,194...44,078,324
G
Wnt5a
Wnt family member 5A
acts_upstream_of_or_within
ISO
MGI:101766 (MGI:3625635|PMID:16723543)
RGD
PMID:16723543
MGI:3625635
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Slit2
slit guidance ligand 2
involved_in
ISO
(PMID:17062560)
RGD
PMID:17062560
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Bcl11b
BCL11 transcription factor B
acts_upstream_of_or_within
ISO
(MGI:5139928|PMID:21752992)
RGD
PMID:21752992
MGI:5139928
NCBI chr 6:126,834,531...126,927,720
Ensembl chr 6:126,834,531...126,928,224
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Ryk
receptor-like tyrosine kinase
involved_in
ISO ISS
UniProtKB:P22725 (MGI:5707582|PMID:23517308) GO_REF:0000024
RGD ParkinsonsUK-UCL
PMID:23517308
GO_REF:0000024 MGI:5707582
NCBI chr 8:103,419,348...103,492,083
Ensembl chr 8:103,419,275...103,491,698
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Wnt5a
Wnt family member 5A
involved_in
ISO
(MGI:4866939|PMID:21106844), (MGI:5707582|PMID:23517308)
RGD
PMID:21106844 PMID:23517308
MGI:4866939 MGI:5707582
NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
G
Wnt7b
Wnt family member 7B
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr 7:116,634,817...116,679,089
Ensembl chr 7:116,634,814...116,679,581
G
Bmpr2
bone morphogenetic protein receptor type 2
involved_in
ISO
UniProtKB:O35607 (MGI:5551355|PMID:24052814)
RGD
PMID:24052814
MGI:5551355
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
G
Cxcl12
C-X-C motif chemokine ligand 12
IMP
RGD
PMID:18701697
RGD:2306571
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
G
Dscam
DS cell adhesion molecule
involved_in
ISO IMP
(PMID:18585357) (MGI:3829111|PMID:18585357)
RGD
PMID:18585357 PMID:18585357
MGI:3829111 , RGD:8553710
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
G
Megf8
multiple EGF-like-domains 8
involved_in
ISS ISO IEA
GO_REF:0000024 (MGI:5551355|PMID:24052814) GO_REF:0000107
CAFA RGD Ensembl
PMID:24052814
GO_REF:0000024 GO_REF:0000107 MGI:5551355
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Sema5a
semaphorin 5A
involved_in
IMP
PMID:15603739
UniProt
PMID:15603739
RGD:8553809
NCBI chr 2:83,309,843...83,741,084
Ensembl chr 2:83,309,843...83,741,084
G
Vegfa
vascular endothelial growth factor A
NOT|involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Robo3
roundabout guidance receptor 3
IMP
RGD
PMID:24936616
RGD:243048438
NCBI chr 8:37,133,542...37,151,674
Ensembl chr 8:37,133,916...37,151,315
G
Tubb2b
tubulin, beta 2B class IIb
involved_in
ISS ISO
GO_REF:0000024 (PMID:23001566)
UniProt RGD
PMID:23001566
GO_REF:0000024
NCBI chr17:30,747,734...30,750,781
Ensembl chr17:30,747,734...30,750,638
G
Atoh7
atonal bHLH transcription factor 7
involved_in
ISO
(MGI:6727566|PMID:33712461)
RGD
PMID:33712461
MGI:6727566
NCBI chr20:25,530,826...25,531,275
Ensembl chr20:25,530,826...25,531,275
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Vegfa
vascular endothelial growth factor A
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Nrp1
neuropilin 1
acts_upstream_of_or_within
ISO
(MGI:3578029|PMID:15814794)
RGD
PMID:15814794
MGI:3578029
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna4
plexin A4
acts_upstream_of_or_within
ISO
MGI:3578655 (MGI:3578029|PMID:15814794)
RGD
PMID:15814794
MGI:3578029
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Sema3a
semaphorin 3A
involved_in
ISO
(PMID:18053124) (MGI:4441128|PMID:15155748)
RGD
PMID:15155748 PMID:18053124
MGI:4441128
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Agrn
agrin
IDA
RGD
PMID:17870250
RGD:2304008
NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
G
Fezf2
Fez family zinc finger 2
acts_upstream_of_or_within
ISO
MGI:3046867|MGI:3525887 (MGI:3610776|PMID:16284245), (MGI:3611736|PMID:16314561), (MGI:5604297|PMID:24997765)
RGD
PMID:16284245 PMID:16314561 PMID:24997765
MGI:3610776 MGI:3611736 MGI:5604297
NCBI chr15:12,768,614...12,777,554
Ensembl chr15:12,773,762...12,777,554
G
Mycbp2
MYC binding protein 2
involved_in
ISO
(MGI:3759703|PMID:17901218)
RGD
PMID:17901218
MGI:3759703
NCBI chr15:79,937,354...80,175,432
Ensembl chr15:79,937,354...80,175,498
G
Nova2
NOVA alternative splicing regulator 2
involved_in
ISO
(MGI:5789071|PMID:27223325)
RGD
PMID:27223325
MGI:5789071
NCBI chr 1:78,572,253...78,613,703
Ensembl chr 1:78,572,279...78,608,021
G
Tbr1
T-box brain transcription factor 1
acts_upstream_of_or_within
ISO
MGI:2179766 (MGI:2179161|PMID:11967891), (MGI:5560839|PMID:24441682)
RGD
PMID:11967891 PMID:24441682
MGI:2179161 MGI:5560839
NCBI chr 3:46,350,237...46,368,397
Ensembl chr 3:46,351,213...46,361,041
G
Ythdf1
YTH N6-methyladenosine RNA binding protein F1
involved_in
ISO
(MGI:6316558|PMID:30843071)
RGD
PMID:30843071
MGI:6316558
NCBI chr 3:168,024,660...168,040,172
Ensembl chr 3:168,024,663...168,040,172
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pou4f2
POU class 4 homeobox 2
involved_in
ISS ISO
GO_REF:0000024 (MGI:1928568|PMID:11163266)
UniProt RGD
PMID:11163266
GO_REF:0000024 MGI:1928568
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Vegfa
vascular endothelial growth factor A
NOT|involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
G
Alcam
activated leukocyte cell adhesion molecule
involved_in
ISS
GO_REF:0000024
UniProt
GO_REF:0000024
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
G
Bmpr1b
bone morphogenetic protein receptor type 1B
acts_upstream_of_or_within
ISO
MGI:2158497 (MGI:2654391|PMID:12654290)
RGD
PMID:12654290
MGI:2654391
NCBI chr 2:230,538,252...230,871,077
Ensembl chr 2:230,541,558...230,871,368
G
Efna5
ephrin A5
acts_upstream_of_or_within
ISO
(MGI:3583377|PMID:15996548)
RGD
PMID:15996548
MGI:3583377
NCBI chr 9:102,316,753...102,595,480
Ensembl chr 9:102,320,295...102,597,413
G
Epha7
Eph receptor A7
acts_upstream_of_or_within
ISO
MGI:3583808 (MGI:3583377|PMID:15996548)
RGD
PMID:15996548
MGI:3583377
NCBI chr 5:42,975,353...43,128,703
Ensembl chr 5:42,975,405...43,127,112
G
Ephb1
Eph receptor B1
involved_in acts_upstream_of_or_within
ISS ISO
GO_REF:0000024 (MGI:2675767|PMID:12971893)
UniProt RGD
PMID:12971893
GO_REF:0000024 MGI:2675767
NCBI chr 8:102,507,549...102,944,839
Ensembl chr 8:102,507,549...102,944,839
G
Ephb2
Eph receptor B2
acts_upstream_of_or_within
ISO
(MGI:2675767|PMID:12971893)
RGD
PMID:12971893
MGI:2675767
NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
G
Ephb3
Eph receptor B3
acts_upstream_of_or_within
ISO
(MGI:2675767|PMID:12971893)
RGD
PMID:12971893
MGI:2675767
NCBI chr11:79,840,668...79,859,467
Ensembl chr11:79,840,668...79,859,370
G
Isl1
ISL LIM homeobox 1
acts_upstream_of_or_within
ISO
MGI:3790243 (MGI:3790171|PMID:18434421)
RGD
PMID:18434421
MGI:3790171
NCBI chr 2:48,079,412...48,090,704
Ensembl chr 2:48,080,522...48,095,584
G
Isl2
ISL LIM homeobox 2
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:3046260 (MGI:3513624|PMID:15537545)
Ensembl RGD
PMID:15537545
GO_REF:0000107 MGI:3513624
NCBI chr 8:55,923,805...55,928,790
Ensembl chr 8:55,923,805...55,928,790
G
Ndp
norrin cystine knot growth factor NDP
acts_upstream_of_or_within
ISO
(MGI:6109213|PMID:29079753)
RGD
PMID:29079753
MGI:6109213
NCBI chr X:5,796,487...5,820,934
Ensembl chr X:5,796,487...5,820,934
G
Nrcam
neuronal cell adhesion molecule
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:2387976 (MGI:3716012|PMID:16701205)
Ensembl RGD
PMID:16701205
GO_REF:0000107 MGI:3716012
NCBI chr 6:61,402,813...61,698,536
Ensembl chr 6:61,329,863...61,702,992
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Pou4f2
POU class 4 homeobox 2
acts_upstream_of_or_within
ISO
MGI:102523|MGI:2429634 (MGI:2156641|PMID:11807038), (MGI:3790171|PMID:18434421)
RGD
PMID:11807038 PMID:18434421
MGI:2156641 MGI:3790171
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
G
Pou4f3
POU class 4 homeobox 3
acts_upstream_of_or_within
ISO
MGI:102524 (MGI:2156641|PMID:11807038)
RGD
PMID:11807038
MGI:2156641
NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
G
Ptprm
protein tyrosine phosphatase, receptor type, M
involved_in
ISO ISS
(PMID:15080886) GO_REF:0000024
RGD UniProt
PMID:15080886
GO_REF:0000024
NCBI chr 9:106,639,573...107,343,698
Ensembl chr 9:106,639,573...107,343,698
G
Robo2
roundabout guidance receptor 2
involved_in
ISO
(MGI:4368044|PMID:19782674)
RGD
PMID:19782674
MGI:4368044
NCBI chr11:12,528,949...14,096,726
Ensembl chr11:12,528,951...13,041,536
G
Rpl24
ribosomal protein L24
acts_upstream_of_or_within
ISO
MGI:1856685 (MGI:1097191|PMID:9331275)
RGD
PMID:9331275
MGI:1097191
NCBI chr11:44,653,937...44,659,346
Ensembl chr11:44,653,937...44,659,370
G
Sema4f
ssemaphorin 4F
acts_upstream_of_or_within
IDA
PMID:10051670
MGI
PMID:10051670
RGD:69991
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
G
Slit1
slit guidance ligand 1
involved_in acts_upstream_of_or_within
IEA ISO
GO_REF:0000107 MGI:1315205|MGI:2179459 (MGI:2157173|PMID:11804570), (MGI:3653077|PMID:16885222), (MGI:3701747|PMID:16828733)
Ensembl RGD
PMID:11804570 PMID:16828733 PMID:16885222
GO_REF:0000107 MGI:2157173 MGI:3653077 MGI:3701747
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
G
Slit2
slit guidance ligand 2
involved_in acts_upstream_of_or_within
ISO
(PMID:10864954), (PMID:19498462) MGI:1315203|MGI:2179460 (MGI:2157173|PMID:11804570), (MGI:3653077|PMID:16885222), (MGI:3701747|PMID:16828733)
RGD
PMID:10864954 PMID:11804570 PMID:16828733 PMID:16885222 PMID:19498462
MGI:2157173 MGI:3653077 MGI:3701747
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
G
Zic2
Zic family member 2
involved_in
ISO
(MGI:2675195|PMID:13678579)
RGD
PMID:13678579
MGI:2675195
NCBI chr15:99,576,697...99,581,522
Ensembl chr15:99,576,697...99,581,522
G
Ece1
endothelin converting enzyme 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Plxna1
plexin A1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:121,737,934...121,782,901
Ensembl chr 4:121,737,945...122,024,196
G
Plxna2
plexin A2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr13:106,163,103...106,358,979
Ensembl chr13:106,163,103...106,358,979
G
Plxna3
plexin A3
involved_in
IBA ISO
PMID:21873635 (MGI:3822054|PMID:18804103)
RGD
PMID:18804103 PMID:21873635
MGI:3822054 , RGD:13792537
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
G
Plxna4
plexin A4
involved_in
IBA ISO
PMID:21873635 (MGI:3822054|PMID:18804103)
RGD
PMID:18804103 PMID:21873635
MGI:3822054 , RGD:13792537
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Plxnb1
plexin B1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 8:109,743,470...109,769,153
Ensembl chr 8:109,744,697...109,769,027
G
Plxnb2
plexin B2
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:120,232,276...120,258,385
Ensembl chr 7:120,232,331...120,258,330
G
Plxnb3
plexin B3
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr X:151,493,832...151,508,688
Ensembl chr X:151,494,207...151,508,674
G
Plxnc1
plexin C1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 7:29,390,038...29,543,985
Ensembl chr 7:29,390,048...29,543,779
G
Plxnd1
plexin D1
involved_in
IBA
PMID:21873635
GO_Central
PMID:21873635
RGD:13792537
NCBI chr 4:149,002,784...149,043,097
Ensembl chr 4:149,002,784...149,043,244
G
Sema3a
semaphorin 3A
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
G
Sema3f
semaphorin 3F
involved_in
ISO
(MGI:3822054|PMID:18804103)
RGD
PMID:18804103
MGI:3822054
NCBI chr 8:108,357,629...108,387,083
Ensembl chr 8:108,357,629...108,387,083
G
Gbx1
gastrulation brain homeobox 1
acts_upstream_of_or_within
ISO
(MGI:5491108|PMID:23418536)
RGD
PMID:23418536
MGI:5491108
NCBI chr 4:10,645,957...10,672,486
Ensembl chr 4:10,645,957...10,672,486
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:3788968|PMID:18356247)
RGD
PMID:18356247
MGI:3788968
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
G
Nrp2
neuropilin 2
involved_in
ISO
(MGI:3788968|PMID:18356247)
RGD
PMID:18356247
MGI:3788968
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
G
Celsr3
cadherin, EGF LAG seven-pass G-type receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr 8:109,530,597...109,558,360
Ensembl chr 8:109,530,641...109,558,354
G
Fzd3
frizzled class receptor 3
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr15:39,421,366...39,488,369
Ensembl chr15:39,421,355...39,488,369
G
Pcdhac2
protocadherin alpha subfamily C, 2
acts_upstream_of_or_within
ISO
(MGI:6148131|PMID:29162883)
RGD
PMID:29162883
MGI:6148131
Ensembl chr18:28,581,225...28,846,211
G
Vangl2
VANGL planar cell polarity protein 2
involved_in
ISO
(MGI:4866939|PMID:21106844)
RGD
PMID:21106844
MGI:4866939
NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
G
Evx1
even-skipped homeobox 1
acts_upstream_of_or_within
ISO
MGI:2182858 (MGI:2136555|PMID:11239430)
RGD
PMID:11239430
MGI:2136555
Ensembl chr 4:81,416,590...81,420,967
G
Ece1
endothelin converting enzyme 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr 5:150,077,679...150,179,375
Ensembl chr 5:150,077,644...150,179,371
G
Edn1
endothelin 1
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
G
Ednra
endothelin receptor type A
involved_in
ISO
MGI:2179061 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
G
Mef2c
myocyte enhancer factor 2C
involved_in
ISO
MGI:1857637|MGI:2158947|MGI:2687362|MGI:3718323 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
G
Plxna4
plexin A4
involved_in
ISO
MGI:105923 (MGI:6304148|PMID:30735130)
RGD
PMID:30735130
MGI:6304148
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
G
Nrp1
neuropilin 1
involved_in
ISO
(MGI:5141569|PMID:21658587)
RGD
PMID:21658587
MGI:5141569
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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