SEMA4D (semaphorin 4D) - Rat Genome Database

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Gene: SEMA4D (semaphorin 4D) Canis lupus familiaris
Analyze
Symbol: SEMA4D
Name: semaphorin 4D
RGD ID: 12352662
Description: ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); positive regulation of axonogenesis (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN GABA-ergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: semaphorin-4D
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1196,825,963 - 96,878,956 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl196,814,674 - 96,878,968 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha197,278,644 - 97,342,104 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0197,427,590 - 97,490,619 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl197,432,133 - 97,490,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1197,055,805 - 97,118,887 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0196,774,870 - 96,838,078 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0197,533,063 - 97,596,441 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
SEMA4D
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1196,825,963 - 96,878,956 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl196,814,674 - 96,878,968 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha197,278,644 - 97,342,104 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0197,427,590 - 97,490,619 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl197,432,133 - 97,490,753 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1197,055,805 - 97,118,887 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0196,774,870 - 96,838,078 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0197,533,063 - 97,596,441 (+)NCBIUU_Cfam_GSD_1.0
SEMA4D
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38989,360,787 - 89,498,113 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl989,360,787 - 89,498,130 (-)EnsemblGRCh38hg38GRCh38
GRCh37991,975,702 - 92,113,028 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36991,181,972 - 91,284,431 (-)NCBINCBI36Build 36hg18NCBI36
Build 34989,221,705 - 89,324,165NCBI
Celera962,560,599 - 62,677,697 (-)NCBICelera
Cytogenetic Map9q22.2NCBI
HuRef961,809,649 - 61,812,817 (-)NCBIHuRef
HuRef961,823,373 - 61,926,322 (-)NCBIHuRef
CHM1_1992,124,533 - 92,243,431 (-)NCBICHM1_1
T2T-CHM13v2.09101,524,564 - 101,662,071 (-)NCBIT2T-CHM13v2.0
Sema4d
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391351,839,565 - 51,947,823 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1351,839,565 - 51,947,783 (-)EnsemblGRCm39 Ensembl
GRCm381351,685,529 - 51,793,678 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1351,685,529 - 51,793,747 (-)EnsemblGRCm38mm10GRCm38
MGSCv371351,796,617 - 51,889,013 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361351,713,744 - 51,806,140 (-)NCBIMGSCv36mm8
Celera1352,773,981 - 52,868,989 (-)NCBICelera
Cytogenetic Map13A5NCBI
cM Map1326.16NCBI
Sema4d
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81713,582,085 - 13,688,889 (+)NCBIGRCr8
mRatBN7.21713,430,324 - 13,537,146 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1713,430,379 - 13,537,138 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1713,427,656 - 13,450,343 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01715,038,325 - 15,061,123 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01713,354,447 - 13,377,136 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01713,516,276 - 13,538,513 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1713,488,376 - 13,553,974 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01715,590,977 - 15,613,214 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41719,352,632 - 19,373,179 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11719,332,919 - 19,373,283 (+)NCBI
Celera1713,255,006 - 13,277,562 (+)NCBICelera
Cytogenetic Map17p14NCBI
Sema4d
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555152,608,331 - 2,689,326 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555152,573,816 - 2,676,387 (+)NCBIChiLan1.0ChiLan1.0
SEMA4D
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21149,962,438 - 50,099,628 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1949,964,928 - 50,102,016 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0960,451,420 - 60,588,519 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1988,497,528 - 88,611,374 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl988,497,528 - 88,560,811 (-)Ensemblpanpan1.1panPan2
Sema4d
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494411,158,121 - 11,231,467 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936780317,948 - 350,113 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936780317,926 - 350,113 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SEMA4D
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14957,081 - 1,078,508 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114957,074 - 1,078,522 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2141,174,861 - 1,259,699 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SEMA4D
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11299,872,725 - 99,951,441 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1299,874,189 - 99,900,982 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603888,195,884 - 88,316,203 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sema4d
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476523,197,462 - 23,229,922 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476523,097,771 - 23,244,778 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in SEMA4D
998 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 1 3 11 6 1 12 10 1
Low 4 2 11 6 6 6 5 8 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005615958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005615960 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038466616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038527315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038591620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038606145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038606262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655417 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038655419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_533551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005421861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000003433   ⟹   ENSCAFP00000003185
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,825,978 - 96,869,865 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000071414   ⟹   ENSCAFP00000050019
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,830,427 - 96,869,865 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000072135   ⟹   ENSCAFP00000055028
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,839,868 - 96,869,865 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000085462   ⟹   ENSCAFP00000048481
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,814,674 - 96,869,865 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000089182   ⟹   ENSCAFP00000062076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,830,427 - 96,878,968 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000093696   ⟹   ENSCAFP00000065196
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl196,825,978 - 96,869,865 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845033155   ⟹   ENSCAFP00845025955
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl197,432,133 - 97,490,753 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845033287   ⟹   ENSCAFP00845026060
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl197,432,133 - 97,481,609 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845033410   ⟹   ENSCAFP00845026155
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl197,432,281 - 97,480,321 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845033490   ⟹   ENSCAFP00845026217
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl197,439,977 - 97,481,595 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845033643   ⟹   ENSCAFP00845026339
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl197,445,902 - 97,481,596 (+)Ensembl
RefSeq Acc Id: XM_005615958   ⟹   XP_005616015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1196,830,412 - 96,869,865 (+)NCBI
Dog10K_Boxer_Tasha197,283,331 - 97,333,013 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005615960   ⟹   XP_005616017
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1196,830,412 - 96,878,956 (+)NCBI
Dog10K_Boxer_Tasha197,283,329 - 97,342,104 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038466612   ⟹   XP_038322540
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1197,060,493 - 97,109,796 (+)NCBI
RefSeq Acc Id: XM_038466613   ⟹   XP_038322541
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1197,055,805 - 97,109,796 (+)NCBI
RefSeq Acc Id: XM_038466614   ⟹   XP_038322542
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1197,080,649 - 97,109,796 (+)NCBI
RefSeq Acc Id: XM_038466615   ⟹   XP_038322543
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1197,060,490 - 97,118,887 (+)NCBI
RefSeq Acc Id: XM_038466616   ⟹   XP_038322544
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1197,082,308 - 97,109,796 (+)NCBI
RefSeq Acc Id: XM_038527311   ⟹   XP_038383239
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0197,537,749 - 97,587,351 (+)NCBI
RefSeq Acc Id: XM_038527312   ⟹   XP_038383240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0197,533,063 - 97,587,351 (+)NCBI
RefSeq Acc Id: XM_038527313   ⟹   XP_038383241
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0197,558,024 - 97,587,351 (+)NCBI
RefSeq Acc Id: XM_038527314   ⟹   XP_038383242
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0197,537,747 - 97,596,441 (+)NCBI
RefSeq Acc Id: XM_038527315   ⟹   XP_038383243
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0197,559,688 - 97,587,351 (+)NCBI
RefSeq Acc Id: XM_038591616   ⟹   XP_038447544
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0196,779,557 - 96,828,997 (+)NCBI
RefSeq Acc Id: XM_038591617   ⟹   XP_038447545
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0196,774,870 - 96,828,997 (+)NCBI
RefSeq Acc Id: XM_038591618   ⟹   XP_038447546
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0196,799,737 - 96,828,997 (+)NCBI
RefSeq Acc Id: XM_038591619   ⟹   XP_038447547
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0196,779,555 - 96,838,078 (+)NCBI
RefSeq Acc Id: XM_038591620   ⟹   XP_038447548
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0196,801,403 - 96,828,997 (+)NCBI
RefSeq Acc Id: XM_038606145   ⟹   XP_038462073
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha197,303,642 - 97,333,013 (+)NCBI
RefSeq Acc Id: XM_038606262   ⟹   XP_038462190
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha197,305,306 - 97,333,013 (+)NCBI
RefSeq Acc Id: XM_038655416   ⟹   XP_038511344
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0197,432,278 - 97,481,610 (+)NCBI
RefSeq Acc Id: XM_038655417   ⟹   XP_038511345
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0197,427,590 - 97,481,610 (+)NCBI
RefSeq Acc Id: XM_038655418   ⟹   XP_038511346
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0197,452,441 - 97,481,610 (+)NCBI
RefSeq Acc Id: XM_038655419   ⟹   XP_038511347
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0197,454,107 - 97,481,610 (+)NCBI
RefSeq Acc Id: XM_533551   ⟹   XP_533551
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1196,825,963 - 96,869,865 (+)NCBI
Dog10K_Boxer_Tasha197,278,644 - 97,333,013 (+)NCBI
Sequence:
RefSeq Acc Id: XR_005421861
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0197,432,276 - 97,490,619 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005616015 (Get FASTA)   NCBI Sequence Viewer  
  XP_005616017 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322540 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322541 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322542 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322543 (Get FASTA)   NCBI Sequence Viewer  
  XP_038322544 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383239 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383240 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383241 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383242 (Get FASTA)   NCBI Sequence Viewer  
  XP_038383243 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447544 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447545 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447546 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447547 (Get FASTA)   NCBI Sequence Viewer  
  XP_038447548 (Get FASTA)   NCBI Sequence Viewer  
  XP_038462073 (Get FASTA)   NCBI Sequence Viewer  
  XP_038462190 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511344 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511345 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511346 (Get FASTA)   NCBI Sequence Viewer  
  XP_038511347 (Get FASTA)   NCBI Sequence Viewer  
  XP_533551 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000003185.4
  ENSCAFP00000050019.1
  ENSCAFP00000062076.1
  ENSCAFP00030004785.1
  ENSCAFP00030004810.1
  ENSCAFP00030004830.1
  ENSCAFP00030004856.1
  ENSCAFP00030004909.1
  ENSCAFP00030004944.1
  ENSCAFP00030004989.1
  ENSCAFP00030005036.1
  ENSCAFP00040000185.1
  ENSCAFP00040000219.1
  ENSCAFP00040000258.1
  ENSCAFP00040000306.1
  ENSCAFP00040000347.1
  ENSCAFP00040000387.1
  ENSCAFP00040000409.1
  ENSCAFP00845025955.1
  ENSCAFP00845026060
  ENSCAFP00845026060.1
  ENSCAFP00845026155.1
  ENSCAFP00845026217
  ENSCAFP00845026217.1
  ENSCAFP00845026339
  ENSCAFP00845026339.1
RefSeq Acc Id: XP_533551   ⟸   XM_533551
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PKB1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616017   ⟸   XM_005615960
- Peptide Label: isoform X8
- UniProtKB: A0A8P0PAW9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005616015   ⟸   XM_005615958
- Peptide Label: isoform X1
- UniProtKB: A0A8P0NZW3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000065196   ⟸   ENSCAFT00000093696
RefSeq Acc Id: ENSCAFP00000003185   ⟸   ENSCAFT00000003433
RefSeq Acc Id: ENSCAFP00000055028   ⟸   ENSCAFT00000072135
RefSeq Acc Id: ENSCAFP00000062076   ⟸   ENSCAFT00000089182
RefSeq Acc Id: ENSCAFP00000048481   ⟸   ENSCAFT00000085462
RefSeq Acc Id: ENSCAFP00000050019   ⟸   ENSCAFT00000071414
RefSeq Acc Id: XP_038322541   ⟸   XM_038466613
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038322543   ⟸   XM_038466615
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038322540   ⟸   XM_038466612
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038322542   ⟸   XM_038466614
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038322544   ⟸   XM_038466616
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038447545   ⟸   XM_038591617
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038447547   ⟸   XM_038591619
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038447544   ⟸   XM_038591616
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038447546   ⟸   XM_038591618
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038447548   ⟸   XM_038591620
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038511345   ⟸   XM_038655417
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PK01 (UniProtKB/TrEMBL),   A0A8C0PKB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511344   ⟸   XM_038655416
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PK44 (UniProtKB/TrEMBL),   A0A8I3P379 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511346   ⟸   XM_038655418
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038511347   ⟸   XM_038655419
- Peptide Label: isoform X4
- UniProtKB: A0A8I3P3H8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038462073   ⟸   XM_038606145
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038462190   ⟸   XM_038606262
- Peptide Label: isoform X4
- UniProtKB: A0A8P0S8D3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383240   ⟸   XM_038527312
- Peptide Label: isoform X2
- UniProtKB: A0A8C0PKB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383242   ⟸   XM_038527314
- Peptide Label: isoform X7
- UniProtKB: A0A8P0PAW9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383239   ⟸   XM_038527311
- Peptide Label: isoform X1
- UniProtKB: A0A8C0PK44 (UniProtKB/TrEMBL),   A0A8I3P379 (UniProtKB/TrEMBL),   A0A8P0NZW3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383241   ⟸   XM_038527313
- Peptide Label: isoform X3
- UniProtKB: A0A8C0PKB1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038383243   ⟸   XM_038527315
- Peptide Label: isoform X4
- UniProtKB: A0A8P0S8D3 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845026155   ⟸   ENSCAFT00845033410
RefSeq Acc Id: ENSCAFP00845025955   ⟸   ENSCAFT00845033155
RefSeq Acc Id: ENSCAFP00845026217   ⟸   ENSCAFT00845033490
RefSeq Acc Id: ENSCAFP00845026339   ⟸   ENSCAFT00845033643
RefSeq Acc Id: ENSCAFP00845026060   ⟸   ENSCAFT00845033287
Protein Domains
Ig-like   Sema


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000002180 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030002898 UniProtKB/TrEMBL
  ENSCAFG00040000163 UniProtKB/TrEMBL
  ENSCAFG00845018763 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000003433.5 UniProtKB/TrEMBL
  ENSCAFT00000071414.2 UniProtKB/TrEMBL
  ENSCAFT00000089182.2 UniProtKB/TrEMBL
  ENSCAFT00030005380.1 UniProtKB/TrEMBL
  ENSCAFT00030005410.1 UniProtKB/TrEMBL
  ENSCAFT00030005430.1 UniProtKB/TrEMBL
  ENSCAFT00030005459.1 UniProtKB/TrEMBL
  ENSCAFT00030005514.1 UniProtKB/TrEMBL
  ENSCAFT00030005557.1 UniProtKB/TrEMBL
  ENSCAFT00030005606.1 UniProtKB/TrEMBL
  ENSCAFT00030005659.1 UniProtKB/TrEMBL
  ENSCAFT00040000242.1 UniProtKB/TrEMBL
  ENSCAFT00040000284.1 UniProtKB/TrEMBL
  ENSCAFT00040000328.1 UniProtKB/TrEMBL
  ENSCAFT00040000385.1 UniProtKB/TrEMBL
  ENSCAFT00040000428.1 UniProtKB/TrEMBL
  ENSCAFT00040000473.1 UniProtKB/TrEMBL
  ENSCAFT00040000498.1 UniProtKB/TrEMBL
  ENSCAFT00845033155 ENTREZGENE
  ENSCAFT00845033155.1 UniProtKB/TrEMBL
  ENSCAFT00845033287 ENTREZGENE
  ENSCAFT00845033287.1 UniProtKB/TrEMBL
  ENSCAFT00845033410.1 UniProtKB/TrEMBL
  ENSCAFT00845033490 ENTREZGENE
  ENSCAFT00845033490.1 UniProtKB/TrEMBL
  ENSCAFT00845033643 ENTREZGENE
  ENSCAFT00845033643.1 UniProtKB/TrEMBL
Gene3D-CATH 2.130.10.10 UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/TrEMBL
  ligand-binding face of the semaphorins, domain 2 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Plexin_repeat UniProtKB/TrEMBL
  PSI UniProtKB/TrEMBL
  Semap_dom UniProtKB/TrEMBL
  Semap_dom_sf UniProtKB/TrEMBL
  Semaphorin UniProtKB/TrEMBL
  WD40/YVTN_repeat-like_dom_sf UniProtKB/TrEMBL
KEGG Report cfa:476350 UniProtKB/TrEMBL
NCBI Gene SEMA4D ENTREZGENE
PANTHER PTHR11036 UniProtKB/TrEMBL
  SEMAPHORIN-4D UniProtKB/TrEMBL
Pfam PSI UniProtKB/TrEMBL
  Sema UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
  SEMA UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  PSI UniProtKB/TrEMBL
  Sema UniProtKB/TrEMBL
Superfamily-SCOP Plexin repeat UniProtKB/TrEMBL
  SSF101912 UniProtKB/TrEMBL
  SSF48726 UniProtKB/TrEMBL
UniProt A0A8C0M1D9_CANLF UniProtKB/TrEMBL
  A0A8C0M1S2_CANLF UniProtKB/TrEMBL
  A0A8C0M527_CANLF UniProtKB/TrEMBL
  A0A8C0M6H0_CANLF UniProtKB/TrEMBL
  A0A8C0M756_CANLF UniProtKB/TrEMBL
  A0A8C0M8C6_CANLF UniProtKB/TrEMBL
  A0A8C0MBL3_CANLF UniProtKB/TrEMBL
  A0A8C0PJT4_CANLF UniProtKB/TrEMBL
  A0A8C0PK01 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PK44 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PKB1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PKB4_CANLF UniProtKB/TrEMBL
  A0A8C0PTT6_CANLF UniProtKB/TrEMBL
  A0A8C0RBG3_CANLF UniProtKB/TrEMBL
  A0A8C0RUH8_CANLF UniProtKB/TrEMBL
  A0A8I3NX99_CANLF UniProtKB/TrEMBL
  A0A8I3P379 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P3E0_CANLF UniProtKB/TrEMBL
  A0A8I3P3H8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P8R7_CANLF UniProtKB/TrEMBL
  A0A8P0NZW3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PAW9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0S8D3 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:53974 ENTREZGENE