PALLD (palladin, cytoskeletal associated protein) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: PALLD (palladin, cytoskeletal associated protein) Canis lupus familiaris
Analyze
Symbol: PALLD
Name: palladin, cytoskeletal associated protein
RGD ID: 12143037
Description: ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to hypoxia (ortholog); epithelial cell morphogenesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: palladin; palladin-like
RGD Orthologs
Human
Mouse
Rat
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12519,147,310 - 19,568,712 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2519,146,898 - 19,553,679 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2519,178,454 - 19,599,760 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02519,285,396 - 19,694,065 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,079 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12519,146,258 - 19,574,549 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02519,153,183 - 19,562,304 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02519,215,651 - 19,637,403 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
PALLD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12519,147,310 - 19,568,712 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2519,146,898 - 19,553,679 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2519,178,454 - 19,599,760 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02519,285,396 - 19,694,065 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,079 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12519,146,258 - 19,574,549 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02519,153,183 - 19,562,304 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02519,215,651 - 19,637,403 (+)NCBIUU_Cfam_GSD_1.0
PALLD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384168,497,052 - 168,928,441 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4168,497,052 - 168,928,457 (+)EnsemblGRCh38hg38GRCh38
GRCh374169,418,203 - 169,849,592 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 364169,654,792 - 170,086,183 (+)NCBINCBI36Build 36hg18NCBI36
Celera4166,748,020 - 167,180,983 (+)NCBICelera
Cytogenetic Map4q32.3NCBI
HuRef4165,170,970 - 165,603,126 (+)NCBIHuRef
CHM1_14169,394,774 - 169,826,047 (+)NCBICHM1_1
T2T-CHM13v2.04171,856,045 - 172,287,862 (+)NCBIT2T-CHM13v2.0
Palld
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39861,964,465 - 62,355,741 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl861,964,467 - 62,355,724 (-)EnsemblGRCm39 Ensembl
GRCm38861,511,431 - 61,902,707 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl861,511,433 - 61,902,690 (-)EnsemblGRCm38mm10GRCm38
MGSCv37863,993,818 - 64,381,487 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36864,403,398 - 64,794,832 (-)NCBIMGSCv36mm8
Celera864,078,203 - 64,475,199 (-)NCBICelera
Cytogenetic Map8B3.1NCBI
cM Map831.23NCBI
Palld
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81633,238,943 - 33,632,236 (+)NCBIGRCr8
mRatBN7.21628,228,006 - 28,621,349 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1627,981,354 - 28,621,337 (+)EnsemblmRatBN7.2 Ensembl
Rnor_6.01631,865,712 - 31,948,168 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1631,734,944 - 31,946,242 (+)NCBIRnor6.0rn6Rnor6.0
Rnor_5.01631,401,114 - 31,786,201 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41631,854,459 - 31,933,792NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1628,535,132 - 28,616,857 (+)NCBICelera
Cytogenetic Map16p12NCBI
PALLD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23166,273,693 - 166,697,100 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14166,787,075 - 167,052,445 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04160,718,475 - 161,140,436 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14173,120,958 - 173,216,409 (+)NCBIpanpan1.1PanPan1.1panPan2
Palld
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494320,372,101 - 20,739,513 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936516802,484 - 1,151,801 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936516786,358 - 1,151,910 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PALLD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1420,678,452 - 21,020,125 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11420,678,456 - 21,020,125 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21421,965,285 - 22,200,581 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PALLD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17114,758,017 - 115,173,240 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366603794,642,207 - 95,083,209 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Palld
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624769150,738 - 559,045 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624769150,800 - 560,163 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in PALLD
4706 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 5 5 22 6 6 6 6 6 12 8 10 6
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005635626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005635627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005635628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038435153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458597 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038458601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510106 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038510110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038573559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038637864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_843128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000064 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000012001   ⟹   ENSCAFP00000011127
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2519,173,352 - 19,553,679 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000012003   ⟹   ENSCAFP00000011129
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2519,146,898 - 19,553,504 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000060953   ⟹   ENSCAFP00000058316
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2519,173,352 - 19,553,679 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000061247   ⟹   ENSCAFP00000045140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2519,146,898 - 19,553,443 (+)Ensembl
RefSeq Acc Id: ENSCAFT00000077290   ⟹   ENSCAFP00000050535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl2519,146,898 - 19,553,504 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845044935   ⟹   ENSCAFP00845035213
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,079 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045124   ⟹   ENSCAFP00845035379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,059 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045289   ⟹   ENSCAFP00845035516
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,059 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045482   ⟹   ENSCAFP00845035679
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,059 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845045647   ⟹   ENSCAFP00845035816
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl2519,285,412 - 19,694,048 (+)Ensembl
RefSeq Acc Id: XM_038435147   ⟹   XP_038291075
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,285,397 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038435148   ⟹   XP_038291076
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,285,398 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038435149   ⟹   XP_038291077
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,285,396 - 19,692,028 (+)NCBI
RefSeq Acc Id: XM_038435150   ⟹   XP_038291078
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,285,399 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038435151   ⟹   XP_038291079
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,285,399 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038435152   ⟹   XP_038291080
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,426,399 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038435153   ⟹   XP_038291081
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.02519,606,702 - 19,694,065 (+)NCBI
RefSeq Acc Id: XM_038458597   ⟹   XP_038314525
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2519,178,454 - 19,586,507 (+)NCBI
RefSeq Acc Id: XM_038458598   ⟹   XP_038314526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2519,178,455 - 19,586,507 (+)NCBI
RefSeq Acc Id: XM_038458599   ⟹   XP_038314527
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2519,178,459 - 19,584,477 (+)NCBI
RefSeq Acc Id: XM_038458600   ⟹   XP_038314528
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2519,178,456 - 19,599,760 (+)NCBI
RefSeq Acc Id: XM_038458601   ⟹   XP_038314529
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha2519,498,809 - 19,586,507 (+)NCBI
RefSeq Acc Id: XM_038510106   ⟹   XP_038366034
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12519,146,258 - 19,561,301 (+)NCBI
RefSeq Acc Id: XM_038510107   ⟹   XP_038366035
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12519,146,259 - 19,561,301 (+)NCBI
RefSeq Acc Id: XM_038510108   ⟹   XP_038366036
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12519,146,263 - 19,559,271 (+)NCBI
RefSeq Acc Id: XM_038510109   ⟹   XP_038366037
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12519,146,260 - 19,574,549 (+)NCBI
RefSeq Acc Id: XM_038510110   ⟹   XP_038366038
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.12519,473,271 - 19,561,301 (+)NCBI
RefSeq Acc Id: XM_038573555   ⟹   XP_038429483
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02519,215,651 - 19,624,145 (+)NCBI
RefSeq Acc Id: XM_038573556   ⟹   XP_038429484
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02519,215,652 - 19,624,145 (+)NCBI
RefSeq Acc Id: XM_038573557   ⟹   XP_038429485
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02519,215,656 - 19,622,115 (+)NCBI
RefSeq Acc Id: XM_038573558   ⟹   XP_038429486
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02519,215,653 - 19,637,403 (+)NCBI
RefSeq Acc Id: XM_038573559   ⟹   XP_038429487
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.02519,536,287 - 19,624,145 (+)NCBI
RefSeq Acc Id: XM_038637864   ⟹   XP_038493792
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.02519,153,183 - 19,562,304 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038291075 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291076 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291077 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291078 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291079 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291080 (Get FASTA)   NCBI Sequence Viewer  
  XP_038291081 (Get FASTA)   NCBI Sequence Viewer  
  XP_038314525 (Get FASTA)   NCBI Sequence Viewer  
  XP_038314526 (Get FASTA)   NCBI Sequence Viewer  
  XP_038314527 (Get FASTA)   NCBI Sequence Viewer  
  XP_038314528 (Get FASTA)   NCBI Sequence Viewer  
  XP_038314529 (Get FASTA)   NCBI Sequence Viewer  
  XP_038366034 (Get FASTA)   NCBI Sequence Viewer  
  XP_038366035 (Get FASTA)   NCBI Sequence Viewer  
  XP_038366036 (Get FASTA)   NCBI Sequence Viewer  
  XP_038366037 (Get FASTA)   NCBI Sequence Viewer  
  XP_038366038 (Get FASTA)   NCBI Sequence Viewer  
  XP_038429483 (Get FASTA)   NCBI Sequence Viewer  
  XP_038429484 (Get FASTA)   NCBI Sequence Viewer  
  XP_038429485 (Get FASTA)   NCBI Sequence Viewer  
  XP_038429486 (Get FASTA)   NCBI Sequence Viewer  
  XP_038429487 (Get FASTA)   NCBI Sequence Viewer  
  XP_038493792 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000011127.5
  ENSCAFP00000011129.4
  ENSCAFP00000045140.2
  ENSCAFP00000050535.2
  ENSCAFP00000058316.2
  ENSCAFP00030034940.1
  ENSCAFP00030035044.1
  ENSCAFP00030035199.1
  ENSCAFP00030035400.1
  ENSCAFP00040028948.1
  ENSCAFP00040029072.1
  ENSCAFP00040029222.1
  ENSCAFP00845035213
  ENSCAFP00845035213.1
  ENSCAFP00845035379.1
  ENSCAFP00845035516
  ENSCAFP00845035516.1
  ENSCAFP00845035679
  ENSCAFP00845035679.1
  ENSCAFP00845035816
  ENSCAFP00845035816.1
Reference Protein Sequences
RefSeq Acc Id: ENSCAFP00000058316   ⟸   ENSCAFT00000060953
RefSeq Acc Id: ENSCAFP00000050535   ⟸   ENSCAFT00000077290
RefSeq Acc Id: ENSCAFP00000045140   ⟸   ENSCAFT00000061247
RefSeq Acc Id: ENSCAFP00000011127   ⟸   ENSCAFT00000012001
RefSeq Acc Id: ENSCAFP00000011129   ⟸   ENSCAFT00000012003
RefSeq Acc Id: XP_038366034   ⟸   XM_038510106
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038366035   ⟸   XM_038510107
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038366037   ⟸   XM_038510109
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038366036   ⟸   XM_038510108
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038366038   ⟸   XM_038510110
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038493792   ⟸   XM_038637864
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038291077   ⟸   XM_038435149
- Peptide Label: isoform X4
- UniProtKB: A0A8I3PMQ4 (UniProtKB/TrEMBL),   A0A8C0SYU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291075   ⟸   XM_038435147
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PL90 (UniProtKB/TrEMBL),   A0A8C0RQQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291076   ⟸   XM_038435148
- Peptide Label: isoform X3
- UniProtKB: A0A8C0P9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291078   ⟸   XM_038435150
- Peptide Label: isoform X5
- UniProtKB: A0A8C0PDR5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291079   ⟸   XM_038435151
- Peptide Label: isoform X6
- UniProtKB: A0A8C0PDR5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291080   ⟸   XM_038435152
- Peptide Label: isoform X7
- UniProtKB: A0A8C0JQ12 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038291081   ⟸   XM_038435153
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038314525   ⟸   XM_038458597
- Peptide Label: isoform X17
- UniProtKB: A0A8P0P0C2 (UniProtKB/TrEMBL),   A0A8C0RQQ3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038314526   ⟸   XM_038458598
- Peptide Label: isoform X18
- UniProtKB: A0A8C0P9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038314528   ⟸   XM_038458600
- Peptide Label: isoform X20
- UniProtKB: A0A8C0P2E9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038314527   ⟸   XM_038458599
- Peptide Label: isoform X19
- UniProtKB: A0A8P0SCP7 (UniProtKB/TrEMBL),   A0A8C0SYU2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038314529   ⟸   XM_038458601
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038429483   ⟸   XM_038573555
- Peptide Label: isoform X13
- UniProtKB: A0A8C0QUH4 (UniProtKB/TrEMBL),   A0A8C0RQQ3 (UniProtKB/TrEMBL),   A0A8C0SZB5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429484   ⟸   XM_038573556
- Peptide Label: isoform X14
- UniProtKB: A0A8C0P9F1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429486   ⟸   XM_038573558
- Peptide Label: isoform X16
- UniProtKB: A0A8C0P2E9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429485   ⟸   XM_038573557
- Peptide Label: isoform X15
- UniProtKB: A0A8C0SYU2 (UniProtKB/TrEMBL),   A0A8C0SZN2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038429487   ⟸   XM_038573559
- Peptide Label: isoform X1
RefSeq Acc Id: ENSCAFP00845035379   ⟸   ENSCAFT00845045124
RefSeq Acc Id: ENSCAFP00845035816   ⟸   ENSCAFT00845045647
RefSeq Acc Id: ENSCAFP00845035679   ⟸   ENSCAFT00845045482
RefSeq Acc Id: ENSCAFP00845035516   ⟸   ENSCAFT00845045289
RefSeq Acc Id: ENSCAFP00845035213   ⟸   ENSCAFT00845044935
Protein Domains
Ig-like

Promoters
RGD ID:13687751
Promoter ID:EPDNEW_C5817
Type:single initiation site
Name:PALLD_1
Description:palladin, cytoskeletal associated protein
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.12519,147,346 - 19,147,406EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000007492 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030021659 UniProtKB/TrEMBL
  ENSCAFG00040017871 UniProtKB/TrEMBL
  ENSCAFG00845025456 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000012001.5 UniProtKB/TrEMBL
  ENSCAFT00000012003.6 UniProtKB/TrEMBL
  ENSCAFT00000060953.2 UniProtKB/TrEMBL
  ENSCAFT00000061247.2 UniProtKB/TrEMBL
  ENSCAFT00000077290.2 UniProtKB/TrEMBL
  ENSCAFT00030040045.1 UniProtKB/TrEMBL
  ENSCAFT00030040158.1 UniProtKB/TrEMBL
  ENSCAFT00030040328.1 UniProtKB/TrEMBL
  ENSCAFT00030040556.1 UniProtKB/TrEMBL
  ENSCAFT00040033264.1 UniProtKB/TrEMBL
  ENSCAFT00040033401.1 UniProtKB/TrEMBL
  ENSCAFT00040033581.1 UniProtKB/TrEMBL
  ENSCAFT00845044935 ENTREZGENE
  ENSCAFT00845044935.1 UniProtKB/TrEMBL
  ENSCAFT00845045124.1 UniProtKB/TrEMBL
  ENSCAFT00845045289 ENTREZGENE
  ENSCAFT00845045289.1 UniProtKB/TrEMBL
  ENSCAFT00845045482 ENTREZGENE
  ENSCAFT00845045482.1 UniProtKB/TrEMBL
  ENSCAFT00845045647 ENTREZGENE
  ENSCAFT00845045647.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/TrEMBL
InterPro Ig-like_dom UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Ig_I-set UniProtKB/TrEMBL
  Ig_sub UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/TrEMBL
  Palladin_C UniProtKB/TrEMBL
NCBI Gene PALLD ENTREZGENE
PANTHER CONTACTIN 5 UniProtKB/TrEMBL
  WRAPPER_REGA-1_KLINGON HOMOLOG UniProtKB/TrEMBL
Pfam I-set UniProtKB/TrEMBL
PROSITE IG_LIKE UniProtKB/TrEMBL
SMART IGc2 UniProtKB/TrEMBL
  SM00409 UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/TrEMBL
UniProt A0A8C0JQ12 ENTREZGENE
  A0A8C0P2E9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0P9F1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0PDR5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0QUH4 ENTREZGENE
  A0A8C0RQQ3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SYU2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SZB5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SZN2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PL90 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PMQ4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3PVG9_CANLF UniProtKB/TrEMBL
  A0A8I3Q7V0_CANLF UniProtKB/TrEMBL
  A0A8I3S9G7_CANLF UniProtKB/TrEMBL
  A0A8P0P0C2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SCP7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0SCS9_CANLF UniProtKB/TrEMBL
  A0A8P0SY76_CANLF UniProtKB/TrEMBL
  A0A8P0TA86_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:44247 ENTREZGENE