NRP1 (neuropilin 1) - Rat Genome Database

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Advanced Search (OLGA)
Gene: NRP1 (neuropilin 1) Canis lupus familiaris
Analyze
Symbol: NRP1
Name: neuropilin 1
RGD ID: 12175992
Description: ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon extension (ortholog); axon extension involved in axon guidance (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); diabetic retinopathy (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: neuropilin-1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.123,416,062 - 3,553,929 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl23,413,821 - 3,552,483 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha23,515,185 - 3,653,323 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.023,710,166 - 3,848,420 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl23,710,304 - 3,848,417 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.123,489,029 - 3,627,209 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.023,524,020 - 3,661,782 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.023,642,794 - 3,780,784 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
angiogenesis  (IEA,ISO)
angiogenesis involved in coronary vascular morphogenesis  (IEA)
artery morphogenesis  (IEA)
axon extension  (IEA,ISO)
axon extension involved in axon guidance  (IEA,ISO)
axon guidance  (IEA,ISO)
axonal fasciculation  (IEA,ISO)
axonogenesis involved in innervation  (IEA)
basal dendrite arborization  (IEA)
basal dendrite development  (IEA)
blood vessel endothelial cell migration  (IEA,ISO)
branching involved in blood vessel morphogenesis  (IEA,ISO)
branchiomotor neuron axon guidance  (IEA)
cardiac neural crest cell migration involved in outflow tract morphogenesis  (ISO)
cell differentiation  (IEA)
cell migration involved in sprouting angiogenesis  (IEA)
cellular response to hepatocyte growth factor stimulus  (IEA)
cellular response to vascular endothelial growth factor stimulus  (IEA)
commissural neuron axon guidance  (IEA)
coronary artery morphogenesis  (IEA)
dendrite development  (IEA,ISO)
dichotomous subdivision of terminal units involved in salivary gland branching  (IEA,ISO)
dorsal root ganglion morphogenesis  (IEA)
endothelial cell chemotaxis  (IEA)
endothelial cell migration  (IEA)
facial nerve structural organization  (IEA)
facioacoustic ganglion development  (IEA)
gonadotrophin-releasing hormone neuronal migration to the hypothalamus  (IEA)
heart development  (IEA,ISO)
hepatocyte growth factor receptor signaling pathway  (IEA)
integrin-mediated signaling pathway  (IEA)
motor neuron axon guidance  (IEA)
motor neuron migration  (IEA)
negative regulation of axon extension  (IEA,ISO)
negative regulation of axon extension involved in axon guidance  (IEA,ISO)
negative regulation of extrinsic apoptotic signaling pathway  (IEA)
negative regulation of neuron apoptotic process  (IEA)
nervous system development  (IEA)
neural crest cell migration involved in autonomic nervous system development  (IEA)
neuron development  (IEA)
neuron migration  (IEA)
neuropilin signaling pathway  (IEA)
otic placode development  (IEA)
outflow tract septum morphogenesis  (IEA)
platelet-derived growth factor receptor signaling pathway  (IEA)
positive chemotaxis  (IEA)
positive regulation of angiogenesis  (IEA)
positive regulation of axon extension involved in axon guidance  (IEA)
positive regulation of cell migration involved in sprouting angiogenesis  (IEA)
positive regulation of endothelial cell migration  (IEA)
positive regulation of ERK1 and ERK2 cascade  (IEA)
positive regulation of filopodium assembly  (IEA)
positive regulation of focal adhesion assembly  (IEA)
positive regulation of peptidyl-tyrosine phosphorylation  (IEA)
positive regulation of phosphorylation  (IEA)
positive regulation of platelet-derived growth factor receptor signaling pathway  (ISO)
positive regulation of smooth muscle cell chemotaxis  (ISO)
positive regulation of stress fiber assembly  (IEA)
positive regulation of substrate adhesion-dependent cell spreading  (IEA)
positive regulation of vascular associated smooth muscle cell migration  (ISO)
postsynapse organization  (IEA)
protein localization to early endosome  (IEA)
regulation of axon extension involved in axon guidance  (IEA,ISO)
regulation of Cdc42 protein signal transduction  (IEA)
regulation of plasma membrane bounded cell projection organization  (IEA)
renal artery morphogenesis  (IEA)
retina vasculature development in camera-type eye  (IEA,ISO)
retina vasculature morphogenesis in camera-type eye  (IEA)
retinal ganglion cell axon guidance  (IEA)
semaphorin-plexin signaling pathway  (IEA,ISO)
sensory neuron axon guidance  (IEA)
sprouting angiogenesis  (IEA)
substrate-dependent cell migration, cell extension  (IEA,ISO)
symbiont entry into host cell  (IEA)
sympathetic ganglion development  (IEA)
sympathetic nervous system development  (IEA,ISO)
sympathetic neuron projection extension  (IEA)
sympathetic neuron projection guidance  (IEA)
trigeminal ganglion development  (IEA)
trigeminal nerve morphogenesis  (IEA,ISO)
trigeminal nerve structural organization  (IEA)
vascular endothelial growth factor receptor signaling pathway  (IEA,ISO)
vascular endothelial growth factor signaling pathway  (IEA)
VEGF-activated neuropilin signaling pathway  (IEA)
ventral trunk neural crest cell migration  (IEA)
vestibulocochlear nerve structural organization  (IEA)
wound healing  (ISO)

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:21713436   PMID:22301074  


Genomics

Comparative Map Data
NRP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.123,416,062 - 3,553,929 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl23,413,821 - 3,552,483 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha23,515,185 - 3,653,323 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.023,710,166 - 3,848,420 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl23,710,304 - 3,848,417 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.123,489,029 - 3,627,209 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.023,524,020 - 3,661,782 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.023,642,794 - 3,780,784 (+)NCBIUU_Cfam_GSD_1.0
NRP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381033,177,493 - 33,334,667 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1033,177,492 - 33,336,262 (-)EnsemblGRCh38hg38GRCh38
GRCh371033,466,421 - 33,623,595 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361033,506,432 - 33,663,839 (-)NCBINCBI36Build 36hg18NCBI36
Build 341033,506,432 - 33,663,476NCBI
Celera1033,231,763 - 33,389,179 (-)NCBICelera
Cytogenetic Map10p11.22NCBI
HuRef1033,186,444 - 33,343,500 (-)NCBIHuRef
CHM1_11033,468,091 - 33,625,451 (-)NCBICHM1_1
T2T-CHM13v2.01033,206,293 - 33,375,463 (-)NCBIT2T-CHM13v2.0
Nrp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398129,085,553 - 129,231,957 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl8129,085,085 - 129,229,844 (+)EnsemblGRCm39 Ensembl
GRCm388128,358,591 - 128,505,476 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8128,358,604 - 128,503,363 (+)EnsemblGRCm38mm10GRCm38
MGSCv378130,882,973 - 131,029,376 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv368131,228,923 - 131,389,437 (+)NCBIMGSCv36mm8
Celera8132,685,332 - 132,831,714 (+)NCBICelera
Cytogenetic Map8E2NCBI
cM Map875.78NCBI
Nrp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81973,256,557 - 73,411,705 (+)NCBIGRCr8
mRatBN7.21956,359,455 - 56,514,628 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1956,359,455 - 56,513,633 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1963,149,364 - 63,302,459 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01964,009,290 - 64,162,389 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01966,091,958 - 66,245,057 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01961,332,351 - 61,486,166 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1961,332,351 - 61,485,858 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01971,984,687 - 72,138,092 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41958,332,004 - 58,487,686 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11958,337,063 - 58,492,741 (+)NCBI
Celera1955,693,756 - 55,846,090 (+)NCBICelera
Cytogenetic Map19q12NCBI
Nrp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554624,101,999 - 4,241,012 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554624,101,997 - 4,241,012 (+)NCBIChiLan1.0ChiLan1.0
NRP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2845,819,786 - 45,977,758 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11045,825,106 - 45,982,734 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01033,298,918 - 33,456,466 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11033,883,162 - 34,039,645 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1033,883,173 - 34,039,648 (-)Ensemblpanpan1.1panPan2
Nrp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934412,194,941 - 12,335,217 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365741,694,336 - 1,834,720 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365741,694,433 - 1,834,720 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NRP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1056,280,665 - 56,430,777 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11056,280,673 - 56,430,832 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21061,651,758 - 61,802,358 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NRP1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1932,474,787 - 32,632,746 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl932,474,309 - 32,633,101 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605641,535,637 - 41,695,579 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nrp1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248058,438,498 - 8,574,508 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248058,438,485 - 8,574,845 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NRP1
1147 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003638876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005616946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005616947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038468999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038469000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038469001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529705 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038529708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038593948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038658023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038658024 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038658025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038658026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_535142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000006098   ⟹   ENSCAFP00000005643
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,416,056 - 3,551,580 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000064442   ⟹   ENSCAFP00000063994
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,413,821 - 3,551,580 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000083414   ⟹   ENSCAFP00000062738
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,414,896 - 3,551,580 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000083961   ⟹   ENSCAFP00000049472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,414,896 - 3,552,483 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000088431   ⟹   ENSCAFP00000066644
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,414,896 - 3,552,483 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000091406   ⟹   ENSCAFP00000044130
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl23,479,070 - 3,551,580 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845004955   ⟹   ENSCAFP00845003952
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl23,710,304 - 3,848,412 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845004962   ⟹   ENSCAFP00845003956
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl23,710,304 - 3,830,818 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845004975   ⟹   ENSCAFP00845003965
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl23,710,455 - 3,848,417 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845005020   ⟹   ENSCAFP00845004001
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl23,710,500 - 3,846,695 (+)Ensembl
RefSeq Acc Id: XM_003638876   ⟹   XP_003638924
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.123,416,062 - 3,553,929 (+)NCBI
Dog10K_Boxer_Tasha23,515,185 - 3,653,323 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005616946   ⟹   XP_005617003
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.123,416,062 - 3,553,929 (+)NCBI
Dog10K_Boxer_Tasha23,515,186 - 3,653,323 (+)NCBI
Sequence:
RefSeq Acc Id: XM_005616947   ⟹   XP_005617004
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.123,416,062 - 3,553,929 (+)NCBI
Dog10K_Boxer_Tasha23,515,187 - 3,653,323 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038468998   ⟹   XP_038324926
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.123,489,029 - 3,627,209 (+)NCBI
RefSeq Acc Id: XM_038468999   ⟹   XP_038324927
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.123,489,031 - 3,627,209 (+)NCBI
RefSeq Acc Id: XM_038469000   ⟹   XP_038324928
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.123,489,029 - 3,627,209 (+)NCBI
RefSeq Acc Id: XM_038469001   ⟹   XP_038324929
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.123,489,030 - 3,627,209 (+)NCBI
RefSeq Acc Id: XM_038529705   ⟹   XP_038385633
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.023,642,794 - 3,780,784 (+)NCBI
RefSeq Acc Id: XM_038529706   ⟹   XP_038385634
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.023,642,796 - 3,780,784 (+)NCBI
RefSeq Acc Id: XM_038529707   ⟹   XP_038385635
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.023,642,794 - 3,780,784 (+)NCBI
RefSeq Acc Id: XM_038529708   ⟹   XP_038385636
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.023,642,795 - 3,780,784 (+)NCBI
RefSeq Acc Id: XM_038593945   ⟹   XP_038449873
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.023,524,020 - 3,661,782 (+)NCBI
RefSeq Acc Id: XM_038593946   ⟹   XP_038449874
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.023,524,022 - 3,661,782 (+)NCBI
RefSeq Acc Id: XM_038593947   ⟹   XP_038449875
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.023,524,020 - 3,661,782 (+)NCBI
RefSeq Acc Id: XM_038593948   ⟹   XP_038449876
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.023,524,021 - 3,661,782 (+)NCBI
RefSeq Acc Id: XM_038658023   ⟹   XP_038513951
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.023,710,166 - 3,848,420 (+)NCBI
RefSeq Acc Id: XM_038658024   ⟹   XP_038513952
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.023,710,168 - 3,848,420 (+)NCBI
RefSeq Acc Id: XM_038658025   ⟹   XP_038513953
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.023,710,166 - 3,848,420 (+)NCBI
RefSeq Acc Id: XM_038658026   ⟹   XP_038513954
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.023,710,167 - 3,848,420 (+)NCBI
RefSeq Acc Id: XM_535142   ⟹   XP_535142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.123,416,062 - 3,553,929 (+)NCBI
Dog10K_Boxer_Tasha23,515,188 - 3,653,323 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003638924 (Get FASTA)   NCBI Sequence Viewer  
  XP_005617003 (Get FASTA)   NCBI Sequence Viewer  
  XP_005617004 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324926 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324927 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324928 (Get FASTA)   NCBI Sequence Viewer  
  XP_038324929 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385633 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385634 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385635 (Get FASTA)   NCBI Sequence Viewer  
  XP_038385636 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449873 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449874 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449875 (Get FASTA)   NCBI Sequence Viewer  
  XP_038449876 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513951 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513952 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513953 (Get FASTA)   NCBI Sequence Viewer  
  XP_038513954 (Get FASTA)   NCBI Sequence Viewer  
  XP_535142 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000005643.5
  ENSCAFP00000049472.2
  ENSCAFP00000063994.2
  ENSCAFP00000066644.2
  ENSCAFP00030020403.1
  ENSCAFP00030020482.1
  ENSCAFP00040003876.1
  ENSCAFP00040003899.1
  ENSCAFP00040003906.1
  ENSCAFP00845003952.1
  ENSCAFP00845003956.1
  ENSCAFP00845003965
  ENSCAFP00845003965.1
  ENSCAFP00845004001
  ENSCAFP00845004001.1
RefSeq Acc Id: XP_005617003   ⟸   XM_005616946
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_535142   ⟸   XM_535142
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KCJ6 (UniProtKB/TrEMBL),   A0A8C0PU36 (UniProtKB/TrEMBL),   A0A8I3N3D9 (UniProtKB/TrEMBL),   A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_003638924   ⟸   XM_003638876
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005617004   ⟸   XM_005616947
- Peptide Label: isoform X4
- UniProtKB: A0A8I3N3A8 (UniProtKB/TrEMBL),   A0A8P0T2A8 (UniProtKB/TrEMBL),   A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000066644   ⟸   ENSCAFT00000088431
Ensembl Acc Id: ENSCAFP00000063994   ⟸   ENSCAFT00000064442
Ensembl Acc Id: ENSCAFP00000005643   ⟸   ENSCAFT00000006098
Ensembl Acc Id: ENSCAFP00000062738   ⟸   ENSCAFT00000083414
Ensembl Acc Id: ENSCAFP00000049472   ⟸   ENSCAFT00000083961
Ensembl Acc Id: ENSCAFP00000044130   ⟸   ENSCAFT00000091406
RefSeq Acc Id: XP_038324926   ⟸   XM_038468998
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038324928   ⟸   XM_038469000
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038324929   ⟸   XM_038469001
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038324927   ⟸   XM_038468999
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038449873   ⟸   XM_038593945
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038449875   ⟸   XM_038593947
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038449876   ⟸   XM_038593948
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038449874   ⟸   XM_038593946
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038513951   ⟸   XM_038658023
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513953   ⟸   XM_038658025
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513954   ⟸   XM_038658026
- Peptide Label: isoform X4
- UniProtKB: A0A8I3N3A8 (UniProtKB/TrEMBL),   A0A8P0T2A8 (UniProtKB/TrEMBL),   A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038513952   ⟸   XM_038658024
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KCJ6 (UniProtKB/TrEMBL),   A0A8C0PU36 (UniProtKB/TrEMBL),   A0A8I3N3D9 (UniProtKB/TrEMBL),   A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038385633   ⟸   XM_038529705
- Peptide Label: isoform X1
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038385635   ⟸   XM_038529707
- Peptide Label: isoform X3
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038385636   ⟸   XM_038529708
- Peptide Label: isoform X4
- UniProtKB: A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL),   A0A8I3N3A8 (UniProtKB/TrEMBL),   A0A8P0T2A8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038385634   ⟸   XM_038529706
- Peptide Label: isoform X2
- UniProtKB: A0A8C0KCJ6 (UniProtKB/TrEMBL),   A0A8C0N2E6 (UniProtKB/TrEMBL),   A0A8C0PU36 (UniProtKB/TrEMBL),   A0A8I3MMI0 (UniProtKB/TrEMBL),   A0A8I3N3D9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845003956   ⟸   ENSCAFT00845004962
Ensembl Acc Id: ENSCAFP00845004001   ⟸   ENSCAFT00845005020
Ensembl Acc Id: ENSCAFP00845003952   ⟸   ENSCAFT00845004955
Ensembl Acc Id: ENSCAFP00845003965   ⟸   ENSCAFT00845004975
Protein Domains
CUB   F5/8 type C   MAM

Promoters
RGD ID:13682368
Promoter ID:EPDNEW_C436
Type:initiation region
Name:NRP1_1
Description:neuropilin 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.123,416,108 - 3,416,168EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000003776 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012522 UniProtKB/TrEMBL
  ENSCAFG00040002371 UniProtKB/TrEMBL
  ENSCAFG00845002787 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000006098.5 UniProtKB/TrEMBL
  ENSCAFT00000064442.2 UniProtKB/TrEMBL
  ENSCAFT00000083961.2 UniProtKB/TrEMBL
  ENSCAFT00000088431.2 UniProtKB/TrEMBL
  ENSCAFT00030023401.1 UniProtKB/TrEMBL
  ENSCAFT00030023495.1 UniProtKB/TrEMBL
  ENSCAFT00040004515.1 UniProtKB/TrEMBL
  ENSCAFT00040004539.1 UniProtKB/TrEMBL
  ENSCAFT00040004546.1 UniProtKB/TrEMBL
  ENSCAFT00845004955.1 UniProtKB/TrEMBL
  ENSCAFT00845004962.1 UniProtKB/TrEMBL
  ENSCAFT00845004975 ENTREZGENE
  ENSCAFT00845004975.1 UniProtKB/TrEMBL
  ENSCAFT00845005020 ENTREZGENE
  ENSCAFT00845005020.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.120.200 UniProtKB/TrEMBL
  2.60.120.290 UniProtKB/TrEMBL
  Galactose-binding domain-like UniProtKB/TrEMBL
InterPro ConA-like_dom_sf UniProtKB/TrEMBL
  CUB_dom UniProtKB/TrEMBL
  FA58C UniProtKB/TrEMBL
  Galactose-bd-like_sf UniProtKB/TrEMBL
  MAM_dom UniProtKB/TrEMBL
  Neuropilin UniProtKB/TrEMBL
  Neuropilin_C UniProtKB/TrEMBL
  Neuropilin_MCO_CoagFactor UniProtKB/TrEMBL
  Sperma_CUB_dom_sf UniProtKB/TrEMBL
NCBI Gene NRP1 ENTREZGENE
PANTHER F5/8 TYPE C DOMAIN-CONTAINING PROTEIN UniProtKB/TrEMBL
  PTHR46806:SF4 UniProtKB/TrEMBL
Pfam CUB UniProtKB/TrEMBL
  DUF3481 UniProtKB/TrEMBL
  F5_F8_type_C UniProtKB/TrEMBL
  MAM UniProtKB/TrEMBL
PIRSF Neuropilin UniProtKB/TrEMBL
PRINTS MAMDOMAIN UniProtKB/TrEMBL
PROSITE CUB UniProtKB/TrEMBL
  FA58C_1 UniProtKB/TrEMBL
  FA58C_2 UniProtKB/TrEMBL
  FA58C_3 UniProtKB/TrEMBL
  MAM_1 UniProtKB/TrEMBL
  MAM_2 UniProtKB/TrEMBL
SMART CUB UniProtKB/TrEMBL
  FA58C UniProtKB/TrEMBL
  MAM UniProtKB/TrEMBL
Superfamily-SCOP SSF49785 UniProtKB/TrEMBL
  SSF49854 UniProtKB/TrEMBL
  SSF49899 UniProtKB/TrEMBL
UniProt A0A8C0KCJ6 ENTREZGENE
  A0A8C0N2E6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0N5C9_CANLF UniProtKB/TrEMBL
  A0A8C0PU36 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3MMI0 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N3A8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N3D9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RQY2_CANLF UniProtKB/TrEMBL
  A0A8P0N6M2_CANLF UniProtKB/TrEMBL
  A0A8P0T2A8 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:43974 ENTREZGENE