DRGX (dorsal root ganglia homeobox)

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Gene: DRGX (dorsal root ganglia homeobox) Canis lupus familiaris

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Symbol:

DRGX

Name:

dorsal root ganglia homeobox

RGD ID:

12066834

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); sequence-specific double-stranded DNA binding (inferred); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); detection of chemical stimulus (ortholog); ASSOCIATED WITH Cockayne syndrome B (ortholog); megacolon (ortholog); schizophrenia (ortholog); FOUND IN nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

dorsal root ganglia homeobox protein; paired related homeobox-like 1; PRRXL1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	DRGX (dorsal root ganglia homeobox)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, PhylomeDB, Treefam
Mus musculus (house mouse):	Drgx (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Drgx (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Drgx (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	DRGX (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Drgx (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	DRGX (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	DRGX (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Drgx (dorsal root ganglia homeobox)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	1,281,868 - 1,316,624 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	1,281,864 - 1,314,932 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	1,517,204 - 1,549,503 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	1,458,411 - 1,490,723 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	1,458,330 - 1,491,350 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	1,256,649 - 1,288,953 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	1,293,756 - 1,326,052 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	1,425,597 - 1,457,907 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Cockayne syndrome B (ISO)

megacolon (ISO)

schizophrenia (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

axon guidance (IEA,ISO)

axonogenesis (IEA,ISO)

detection of chemical stimulus (IEA,ISO)

detection of temperature stimulus (IEA,ISO)

dorsal spinal cord development (IEA,ISO)

nervous system development (IEA,ISO)

neuron differentiation (IEA,ISO)

neuron migration (IEA,ISO)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

sensory perception of mechanical stimulus (IEA,ISO)

trigeminal nerve development (IEA,ISO)

Cellular Component

nucleus (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity, RNA polymerase II-specific (IEA)

sequence-specific double-stranded DNA binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

DRGX
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	1,281,868 - 1,316,624 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	1,281,864 - 1,314,932 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	1,517,204 - 1,549,503 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	1,458,411 - 1,490,723 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	1,458,330 - 1,491,350 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	1,256,649 - 1,288,953 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	1,293,756 - 1,326,052 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	1,425,597 - 1,457,907 (-)	NCBI		UU_Cfam_GSD_1.0

DRGX
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	49,364,066 - 49,396,089 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	49,364,066 - 49,396,089 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	50,572,111 - 50,604,135 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	50,244,167 - 50,269,913 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	44,160,334 - 44,186,078 (-)	NCBI		Celera
Cytogenetic Map	10	q11.23	NCBI
HuRef	10	44,838,688 - 44,868,588 (-)	NCBI		HuRef
CHM1_1	10	50,856,344 - 50,886,243 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	50,212,849 - 50,244,874 (-)	NCBI		T2T-CHM13v2.0

Drgx
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	14	32,317,824 - 32,371,203 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	14	32,321,364 - 32,371,203 (+)	Ensembl		GRCm39 Ensembl
GRCm38	14	32,595,867 - 32,649,246 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	14	32,599,407 - 32,649,246 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	14	33,413,113 - 33,462,432 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	14	31,428,936 - 31,478,256 (+)	NCBI		MGSCv36	mm8
Celera	14	28,856,722 - 28,906,126 (+)	NCBI		Celera
Cytogenetic Map	14	B	NCBI
cM Map	14	19.4	NCBI

Drgx
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	7,861,024 - 7,891,607 (+)	NCBI		GRCr8
mRatBN7.2	16	7,854,849 - 7,884,404 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	7,854,849 - 7,900,600 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	7,866,810 - 7,896,651 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	9,011,758 - 9,041,593 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	7,865,781 - 7,895,587 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	8,823,872 - 8,853,430 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	8,823,872 - 8,853,430 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	10,789,700 - 10,820,026 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	8,110,849 - 8,140,551 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	8,110,846 - 8,140,549 (+)	NCBI
Celera	16	7,317,250 - 7,346,264 (-)	NCBI		Celera
Cytogenetic Map	16	p16	NCBI

Drgx
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955556	842,714 - 870,248 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955556	842,714 - 870,248 (+)	NCBI	ChiLan1.0	ChiLan1.0

DRGX
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	61,630,532 - 61,665,424 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	61,635,851 - 61,670,722 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	44,845,622 - 44,880,512 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3

Drgx
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	79,687,434 - 79,722,279 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936728	892,814 - 923,089 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936728	892,814 - 923,089 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DRGX
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	89,942,251 - 89,976,030 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	89,941,793 - 89,975,613 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	97,851,058 - 97,884,297 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DRGX
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	42,415,442 - 42,447,912 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	42,416,021 - 42,445,858 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	2,169,188 - 2,201,899 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Drgx
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624928	566,793 - 592,507 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624928	566,405 - 592,561 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in DRGX
349 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	hemolymphoid system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
1	3	1	18	11	2	1	6	10	7	7	14	2

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005637482	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022411940	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022411941	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022411942	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038439665	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038515643	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038577937	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038642121	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000297	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000010667 ⟹ ENSCAFP00000009888

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	28	1,281,864 - 1,314,932 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845036751 ⟹ ENSCAFP00845028773

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	28	1,458,330 - 1,491,350 (-)	Ensembl

RefSeq Acc Id:

XM_005637482 ⟹ XP_005637539

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	1,281,868 - 1,314,687 (-)	NCBI
Dog10K_Boxer_Tasha	28	1,517,204 - 1,549,503 (-)	NCBI

Sequence:

show sequence

GAGCGCTCGCTGGTCCTGGCTGCGGTGGCCGGGGCGCAGGGCTTGCGGCGGGGACCCCGGAGAG
CCGGTGGCCGGATTGCCTGGGTTTGGCGTTGGGGCCCGCGCGGTGGACCCGACCCGAAGGGCTG
TCCCACAGGGGACCGGGCTTGCGATGGCGCTGCCATGTCCCCGCCAGTCCCCACAGTGGGCTGA
GGGAGGGGGTGGCTTCCAGGAGGAGGGCCCAGTGCGCCCCAGGACCGGTCCCGCGCGTGCAGAG
GGAGACTTAGCCTTATCGTTGTTTGCTTTGCAGCCAGGCCGGAGCTTCGCGCGCCGTGTTTGTC
CAGCGGTCACCCTCCCGGTCACCCTTCCCAGGCCCCGCCGCCCAGCGGATCCGGCCGTCGGCGA
TGTTTTACTTCCACTGTCCGCCACAGCTAGACGGTACTGCACCCTTTGGCAATCACTCTCCAGG
AGACTTCGACGATGGCTTTCTGCGCAGGAAGCAGCGCCGGAACCGGACCACATTTACTCTACAG
CAGCTGGAAGCTCTTGAGGCAGTTTTTGCTCAAACACACTACCCCGATGTCTTCACCAGAGAAG
AGCTAGCCATGAAAATAAACCTCACAGAAGCCAGAGTGCAGGTTTGGTTCCAGAACCGACGGGC
CAAATGGAGGAAAACAGAGAGAGGGGCTTCTGACCAAGAGCCAGGAGCCAAGGAGCCCATGGCA
GAGGTGACGCCACCACCTGTGAGAAACATCAATTCCCCACCCCCGGGGGACCAGGCCCGGAGCA
AGAAGGAGGCCCTGGAAGCCCAGCAGAGCCTGGGGAGAACTGTGGGTCCGACGGGACCTTTCTT
TCCTTCTTGCTTGCCGGGGACCCTCCTGAATACAGCCACATATGCCCAGGCCCTGTCACATGTT
GCTTCCCTGAAAGGGGGCCCTCTGTGCTCTTGCTGTGTCCCGGACCCCATGGGGCTGTCGTTCC
TTCCCACCTACGGCTGCCAGAGCAACCGCACAGCCAGCGTGGCTGCCCTGCGCATGAAGGCTCG
GGAGCATTCGGAGGCCGTCCTGCAGTCGGCCAACCTCCTGCCCTCTGCCAGCAGCAGCCCCAAC
CCCACGGCCAAGCCGGCGCCCCCTGATGGAAGCCAGGACAAGAATCCTTCTGCCAAGGAACAGA
GTGTGGGGGAGAAGAGCGTATGAGGGTCCTCAGTGAGCGTCCAGGCCCGAGGCGCCCTCCCCTT
TCCCCTGCTTCTCCCAGCCTCAGCCCCTGTGGAAGACTCTCCTAAAAGCAAAGGGAAGCCTGCA
GCCCAGGGTCTCTCTTGGACTCTGGAAAAGAGGTAGACCCACAGCTCTCCTGGCATCCGGAGAG
TGCCTCTGGAGTCCTACCGGTGGGGCCGTGTTGTCCTGGCTTCTTTGTTGACAAGTCCAGATGA
AACTCATGGGCACCAGAGCCCACTGTGTGGTGAGACCCCTGGGGTTTTCACCTGGTCCCAGAAG
TCTTGGAGGGAAGAAGAGTTGCTCACCCCCTCACCTTTCTGTCCCTTTCCTGGGCTGCTTTTGT
AGGTCTTACCAACCCAAAGAACTGGTGTGGGTCATCCTTGAGAGATGCTCAGGGCTGAATCTTG
TGCTTTGAATGAAGTAGGACTATGCCCGTTACATTAAGAGCCAGGAAACTGGTGTAATCCCAAC
TAAGTTTTACTGCCCTCCGCTAAGACTAGCAGCAATGCTCCCTCCCCTTTCTCTTGTTGGAAGA
CATTGGTTGTAGGCTGGGTTAGATTAGATGGTGAGAAGATGTAGGGTGAGGAGGGGCTGGCACA
GCCTGTCCCAGGCACTTCTGGCCAGGGAGGCTGGGCTAATCAGACAGGCCACCAGCTCCACCAA
CTGGGACCACCATCATGACTGCAGGCGCGAGTGAGTGTGGACTCCCACCATGAAGTGCCCGCCT
ACAAGCCCCGCCTCTCTGGACCACACCTCTAGCTTGGTGGGAGGTTGACCGGTGGAAAGCAGTG
CTCTGATCTAGAGAATGCTGAGAGTGCTCAGAGAGAGAAATCTTCCACGAACGTCTCTGACATA
AGGACACATCTGGATGAACTACCTTTCCTCAGGTCCCTGGCACGTGGAGGGGCCTCTCCAGTGG
TATTATTTATTGATTTTTTTTTTTTTTTTTACAGAAGGAGAAAGAAAAGTAGGAAGCAAGAGGA
GAATGGTGTATATGGAGAAATGGAGTATGGGGAAGAGGGCTTCCTTGTGGTGTGAAGAGAATTC
ATTCCAAAGGGCCAAATTTCATAGAGATTTCAGTTTCGATCTACTGGGTGTGTTTTCTCTCATG
TCGATAGTAAACTTGAAGAGATCCAAGGGAAAATGTGCAATAGCATGAGCTCTGTCACTCTCTG
GCAGGGGTTTCTGGTTGCAGTTTCGGATGGCTTACTGATGGCGTTTCCATGCAAACCGTTATTG
CTTTTATGACACTTATTTTCCCCTAAGTTATAATCAAAATGTTCTACCTTCAGATCACCCTGCT
CCCCTTATAACCCCCCATCCAGAAGTCCCCCACTGATACTCCCGAGTGTATCGTGCTTCGTCTC
TGATGACCGCCAAGCATTTGATAAAATACACTGTCTCCTTAAAAAGAAAAAAAATCAAATCCTT
CTTCCTGCTGTATTTTGCTTGTTGAGTACAAAGATGAAACGATTTGCCAAAAAGCAGCAGAGTC
GCTTCCGTTTCCCTGTAATTACGAATGTTGGGTTGAACGATGTAAGCTCAAGCCCTTATGTACA
CTAACTCTTCAATCTAATTGTTTGATTAAACTCGTATTTCCTCCAGAAAGGTACATAAATAAGT
GAACTGTTGAGCAAATTAAGAATACTTAACAGCATTGCATCTGAAAAGTAGTTACGCTGATTAA
ATTTTGTGTCCTTGAGGACTTTCAGGAAATTACTTTTGATCGTCAATAACACAATTAAGTAAAC
TACACACACATTAGCATGAATAATTGATAAGAAATTATGTATTACCACGAAGCACTGATTTAAT
AATTCATGATGCGACACTCTAGTGACTGTGCAAAACTGGAAAACATCGAAAAGTCTGCCTGATG
TTACTGAAAGGAGAAAAATCAGCACCAGACCTCTGCAGAGATATCAAGTACTTAGTTTTGTTGT
ACAAAGGCAAAAAGTAACCATGCATGCTGTAGTTTCTGTTTGTTTAAATACCCAAATAAATCTA
GCAGAGTTAAAAAGAAA

hide sequence

RefSeq Acc Id:

XM_038439665 ⟹ XP_038295593

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	1,458,411 - 1,490,723 (-)	NCBI

RefSeq Acc Id:

XM_038515643 ⟹ XP_038371571

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	1,256,649 - 1,288,953 (-)	NCBI

RefSeq Acc Id:

XM_038577937 ⟹ XP_038433865

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	1,425,597 - 1,457,907 (-)	NCBI

RefSeq Acc Id:

XM_038642121 ⟹ XP_038498049

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	1,293,756 - 1,326,052 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_005637539	(Get FASTA)	NCBI Sequence Viewer
	XP_038295593	(Get FASTA)	NCBI Sequence Viewer
	XP_038371571	(Get FASTA)	NCBI Sequence Viewer
	XP_038433865	(Get FASTA)	NCBI Sequence Viewer
	XP_038498049	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000009888.3
	ENSCAFP00030028482.1
	ENSCAFP00030028542.1
	ENSCAFP00040036376.1
	ENSCAFP00845028773
	ENSCAFP00845028773.1

RefSeq Acc Id:

XP_005637539 ⟸ XM_005637482

- UniProtKB:

A0A8C0NTF5 (UniProtKB/TrEMBL), A0A8C0R7I0 (UniProtKB/TrEMBL), A0A8I3PDM0 (UniProtKB/TrEMBL), A0A8C0NTA8 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MFYFHCPPQLDGTAPFGNHSPGDFDDGFLRRKQRRNRTTFTLQQLEALEAVFAQTHYPDVFTRE
ELAMKINLTEARVQVWFQNRRAKWRKTERGASDQEPGAKEPMAEVTPPPVRNINSPPPGDQARS
KKEALEAQQSLGRTVGPTGPFFPSCLPGTLLNTATYAQALSHVASLKGGPLCSCCVPDPMGLSF
LPTYGCQSNRTASVAALRMKAREHSEAVLQSANLLPSASSSPNPTAKPAPPDGSQDKNPSAKEQ
SVGEKSV

hide sequence

Ensembl Acc Id:

ENSCAFP00000009888 ⟸ ENSCAFT00000010667

RefSeq Acc Id:

XP_038371571 ⟸ XM_038515643

RefSeq Acc Id:

XP_038498049 ⟸ XM_038642121

RefSeq Acc Id:	XP_038295593 ⟸ XM_038439665
- UniProtKB:	A0A8C0NTF5 (UniProtKB/TrEMBL), A0A8C0R7I0 (UniProtKB/TrEMBL), A0A8I3PDM0 (UniProtKB/TrEMBL), A0A8C0NTA8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038433865 ⟸ XM_038577937
- UniProtKB:	A0A8C0NTA8 (UniProtKB/TrEMBL), A0A8C0NTF5 (UniProtKB/TrEMBL), A0A8C0R7I0 (UniProtKB/TrEMBL), A0A8I3PDM0 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845028773 ⟸ ENSCAFT00845036751

Protein Domains

Homeobox OAR

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000006619	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030017709	UniProtKB/TrEMBL
	ENSCAFG00040022461	UniProtKB/TrEMBL
	ENSCAFG00845020840	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000010667.3	UniProtKB/TrEMBL
	ENSCAFT00030032641.1	UniProtKB/TrEMBL
	ENSCAFT00030032714.1	UniProtKB/TrEMBL
	ENSCAFT00040041698.1	UniProtKB/TrEMBL
	ENSCAFT00845036751	ENTREZGENE
	ENSCAFT00845036751.1	UniProtKB/TrEMBL
Gene3D-CATH	Homeodomain-like	UniProtKB/TrEMBL
InterPro	Homeobox-like_sf	UniProtKB/TrEMBL
	Homeobox_CS	UniProtKB/TrEMBL
	Homeobox_dom	UniProtKB/TrEMBL
	OAR_dom	UniProtKB/TrEMBL
	Paired_Homeobox_TFs	UniProtKB/TrEMBL
KEGG Report	cfa:607056	UniProtKB/TrEMBL
NCBI Gene	DRGX	ENTREZGENE
PANTHER	DORSAL ROOT GANGLIA HOMEOBOX PROTEIN	UniProtKB/TrEMBL
	HOMEOBOX PROTEIN ARISTALESS	UniProtKB/TrEMBL
Pfam	Homeodomain	UniProtKB/TrEMBL
	OAR	UniProtKB/TrEMBL
PROSITE	HOMEOBOX_1	UniProtKB/TrEMBL
	HOMEOBOX_2	UniProtKB/TrEMBL
	OAR	UniProtKB/TrEMBL
SMART	HOX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46689	UniProtKB/TrEMBL
UniProt	A0A8C0NTA8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0NTF5	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0R7I0	ENTREZGENE
	A0A8I3PDM0	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:40099	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar