RAC3 (Rac family small GTPase 3) - Rat Genome Database

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Gene: RAC3 (Rac family small GTPase 3) Canis lupus familiaris
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Symbol: RAC3
Name: Rac family small GTPase 3
RGD ID: 12184933
Description: ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell projection assembly (ortholog); cerebral cortex GABAergic interneuron development (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorder with Structural Brain Anomalies and Dysmorphic Facies (ortholog); FOUND IN cell periphery (ortholog); cytoskeleton (ortholog); cytosol (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: ras-related C3 botulinum toxin substrate 3; ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19293,260 - 295,990 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha9895,452 - 897,610 (-)NCBI
ROS_Cfam_1.09886,672 - 888,830 (-)NCBI
UMICH_Zoey_3.19911,839 - 913,997 (-)NCBI
UNSW_CanFamBas_1.091,038,528 - 1,040,685 (-)NCBI
UU_Cfam_GSD_1.091,117,115 - 1,119,260 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Comparative Map Data
RAC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.19293,260 - 295,990 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha9895,452 - 897,610 (-)NCBI
ROS_Cfam_1.09886,672 - 888,830 (-)NCBI
UMICH_Zoey_3.19911,839 - 913,997 (-)NCBI
UNSW_CanFamBas_1.091,038,528 - 1,040,685 (-)NCBI
UU_Cfam_GSD_1.091,117,115 - 1,119,260 (-)NCBI
RAC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1782,031,678 - 82,034,204 (+)EnsemblGRCh38hg38GRCh38
GRCh381782,031,678 - 82,034,204 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371779,989,554 - 79,992,080 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361777,582,821 - 77,585,369 (+)NCBINCBI36hg18NCBI36
Build 341777,582,820 - 77,585,368NCBI
Celera1776,585,490 - 76,585,771 (+)NCBI
Cytogenetic Map17q25.3NCBI
HuRef1775,389,767 - 75,392,200 (+)NCBIHuRef
CHM1_11780,075,736 - 80,078,283 (+)NCBICHM1_1
Rac3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911120,612,294 - 120,614,795 (+)NCBIGRCm39mm39
GRCm39 Ensembl11120,612,296 - 120,614,795 (+)Ensembl
GRCm3811120,721,468 - 120,723,969 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11120,721,470 - 120,723,969 (+)EnsemblGRCm38mm10GRCm38
MGSCv3711120,582,782 - 120,585,283 (+)NCBIGRCm37mm9NCBIm37
MGSCv3611120,537,558 - 120,540,059 (+)NCBImm8
Celera11132,456,927 - 132,459,428 (+)NCBICelera
Cytogenetic Map11E2NCBI
Rac3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.210106,002,808 - 106,005,244 (+)NCBImRatBN7.2
Rnor_6.010109,903,920 - 109,906,596 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10109,904,259 - 109,906,232 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010109,496,505 - 109,498,228 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10104,548,128 - 104,549,186 (+)NCBICelera
Cytogenetic Map10q32.3NCBI
Rac3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555061,137,204 - 1,141,336 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555061,139,098 - 1,142,443 (-)NCBIChiLan1.0ChiLan1.0
RAC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11782,141,531 - 82,143,623 (+)NCBIpanpan1.1PanPan1.1panPan2
Mhudiblu_PPA_v01776,436,264 - 76,439,492 (+)NCBIMhudiblu_PPA_v0panPan3
Rac3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602881,280 - 884,171 (-)NCBI
SpeTri2.0NW_0049365945,527,788 - 5,530,694 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RAC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl12981,076 - 984,227 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.112981,072 - 984,222 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
RAC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11673,919,086 - 73,921,647 (+)NCBI
ChlSab1.1 Ensembl1673,919,128 - 73,925,277 (+)Ensembl
Vero_WHO_p1.0NW_02366607745,386,101 - 45,388,661 (+)NCBI
Rac3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480110,862,490 - 10,864,856 (+)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014116198 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484634 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038484637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038546279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610283 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038610286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623127 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623132 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623137 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038623139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675396 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038675398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000103 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_014116198   ⟹   XP_013971673
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.19293,260 - 295,990 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038484634   ⟹   XP_038340562
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.19911,839 - 913,997 (-)NCBI
RefSeq Acc Id: XM_038484635   ⟹   XP_038340563
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.19911,839 - 913,976 (-)NCBI
RefSeq Acc Id: XM_038484636   ⟹   XP_038340564
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.19911,839 - 913,997 (-)NCBI
RefSeq Acc Id: XM_038484637   ⟹   XP_038340565
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.19912,292 - 913,997 (-)NCBI
RefSeq Acc Id: XM_038546276   ⟹   XP_038402204
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.091,117,115 - 1,119,260 (-)NCBI
RefSeq Acc Id: XM_038546277   ⟹   XP_038402205
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.091,117,115 - 1,119,239 (-)NCBI
RefSeq Acc Id: XM_038546278   ⟹   XP_038402206
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.091,117,115 - 1,119,260 (-)NCBI
RefSeq Acc Id: XM_038546279   ⟹   XP_038402207
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.091,117,568 - 1,119,260 (-)NCBI
RefSeq Acc Id: XM_038610283   ⟹   XP_038466211
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.091,038,528 - 1,040,685 (-)NCBI
RefSeq Acc Id: XM_038610284   ⟹   XP_038466212
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.091,038,528 - 1,040,664 (-)NCBI
RefSeq Acc Id: XM_038610285   ⟹   XP_038466213
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.091,038,528 - 1,040,685 (-)NCBI
RefSeq Acc Id: XM_038610286   ⟹   XP_038466214
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.091,038,981 - 1,040,685 (-)NCBI
RefSeq Acc Id: XM_038623127   ⟹   XP_038479055
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha9895,452 - 897,610 (-)NCBI
RefSeq Acc Id: XM_038623132   ⟹   XP_038479060
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha9895,452 - 897,589 (-)NCBI
RefSeq Acc Id: XM_038623137   ⟹   XP_038479065
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha9895,452 - 897,610 (-)NCBI
RefSeq Acc Id: XM_038623139   ⟹   XP_038479067
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha9895,905 - 897,610 (-)NCBI
RefSeq Acc Id: XM_038675395   ⟹   XP_038531323
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.09886,672 - 888,830 (-)NCBI
RefSeq Acc Id: XM_038675396   ⟹   XP_038531324
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.09886,672 - 888,809 (-)NCBI
RefSeq Acc Id: XM_038675397   ⟹   XP_038531325
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.09886,672 - 888,830 (-)NCBI
RefSeq Acc Id: XM_038675398   ⟹   XP_038531326
RefSeq Status:
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.09887,125 - 888,830 (-)NCBI
Reference Sequences
RefSeq Acc Id: XP_013971673   ⟸   XM_014116198
- Sequence:
RefSeq Acc Id: XP_038340564   ⟸   XM_038484636
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038340562   ⟸   XM_038484634
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038340563   ⟸   XM_038484635
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038340565   ⟸   XM_038484637
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038466213   ⟸   XM_038610285
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038466211   ⟸   XM_038610283
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038466212   ⟸   XM_038610284
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038466214   ⟸   XM_038610286
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038531325   ⟸   XM_038675397
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038531323   ⟸   XM_038675395
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038531324   ⟸   XM_038675396
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038531326   ⟸   XM_038675398
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038479065   ⟸   XM_038623137
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038479055   ⟸   XM_038623127
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038479060   ⟸   XM_038623132
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038479067   ⟸   XM_038623139
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038402206   ⟸   XM_038546278
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038402204   ⟸   XM_038546276
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038402205   ⟸   XM_038546277
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038402207   ⟸   XM_038546279
- Peptide Label: isoform X4


Additional Information

Database Acc Id Source(s)
NCBI Gene RAC3 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-15 RAC3  Rac family small GTPase 3    ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)  Symbol and/or name change 5135510 APPROVED