Skull2_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Skull2_m (skull morphology 2 (mouse)) Mus musculus

Symbol: Skull2_m
Name: skull morphology 2 (mouse)
RGD ID: 1301894
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm391139,602,037 - 173,602,216MOUSEQTLGRCm39
GRCm381139,774,467 - 173,774,646MOUSEQTLGRCm38
MGSCv371141,704,598 - 175,704,777 (+)MOUSEQTLGRCm37
MGSCv31141,161,549 - 177,161,549RGD
cM Map167.71MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Skull2_mMousecraniofacial phenotype  IEA 704405Created by mouse qtl pipelineMGI 
Skull2_mMouseenlarged cranium  IEA 5509061 MGI 
Skull2_mMouseskeleton phenotype  IEA 704405Created by mouse qtl pipelineMGI 

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline


1 to 20 of 1260 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
329966539LOC131296431STARR-seq mESC enhancer starr_024851139607579139608947Mouse
1614202Cfhr4complement factor H-related 41139625657139708977Mouse
329961849LOC131296432STARR-seq mESC enhancer starr_024861139643730139645246Mouse
329963325LOC131296433STARR-seq mESC enhancer starr_024871139651364139653546Mouse
329963143LOC131296434STARR-seq mESC enhancer starr_024881139657095139657899Mouse
15002708Gm25619predicted gene, 256191139714721139714824Mouse
10037289Gm41963predicted gene, 419631139731903139734437Mouse
1618688Cfhr2complement factor H-related 21139738030139786437Mouse
329964330LOC131296435STARR-seq mESC enhancer starr_024901139770694139772263Mouse
5147044Gm16332predicted gene 163321139805832139864215Mouse
329968915LOC131296436STARR-seq mESC enhancer starr_024911139815801139816576Mouse
329962096LOC131296437STARR-seq mESC enhancer starr_024921139834790139836040Mouse
329966304LOC131296438STARR-seq mESC enhancer starr_024931139852170139852945Mouse
2295575Gm5837predicted gene 58371139855788139857421Mouse
14997949Gm26048predicted gene, 260481139931563139931704Mouse
733427Cfhcomplement component factor h1140013593140111149Mouse
329967137LOC131296439STARR-seq mESC enhancer starr_024961140115587140117174Mouse
329968984LOC131296440STARR-seq mESC enhancer starr_024971140132492140134014Mouse
1622042Kcnt2potassium channel, subfamily T, member 21140173373140541783Mouse
329967695LOC131296441STARR-seq mESC enhancer starr_024981140356680140357924Mouse

1 to 20 of 1260 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 174 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
1302037Nktcn1_mnatural killer T cell numbers 1 (mouse)Not determined1168186243171632257Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
4141878Qrr1_mQTL rich region on chromosome 1 (mouse)Not determined170878743175320066Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357854Sle16_msystematic lupus erythematosus susceptibility 16 (mouse)Not determined1169038741177377587Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse

1 to 10 of 174 rows


Database
Acc Id
Source(s)
MGD MGI:2149681

Note Type Note Reference