Fcer1g (Fc receptor, IgE, high affinity I, gamma polypeptide) - Rat Genome Database

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Gene: Fcer1g (Fc receptor, IgE, high affinity I, gamma polypeptide) Mus musculus
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Symbol: Fcer1g
Name: Fc receptor, IgE, high affinity I, gamma polypeptide
RGD ID: 10572
MGI Page MGI
Description: Enables IgE receptor activity; IgG binding activity; and identical protein binding activity. Contributes to IgE binding activity. Involved in several processes, including cell surface receptor signaling pathway; positive regulation of interleukin-4 production; and serotonin secretion by platelet. Acts upstream of or within several processes, including immune response-regulating cell surface receptor signaling pathway; positive regulation of cytokine production; and positive regulation of immune effector process. Located in external side of plasma membrane. Part of Fc-epsilon receptor I complex. Is expressed in central nervous system; gut; male reproductive gland or organ; and retina. Orthologous to human FCER1G (Fc epsilon receptor Ig).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI573376; CD23; Fc receptor gamma-chain; fc-epsilon RI-gamma; Fce; Fce1g; FcepsilonRI; fceRI gamma; FcR-ga; FcR-gamma; FcR[g; FcR[g]; FcRga; FcRgamma; high affinity immunoglobulin epsilon receptor subunit gamma; igE Fc receptor subunit gamma; Ly-5; Ly-50
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,057,141 - 171,061,918 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1171,057,141 - 171,061,934 (-)EnsemblGRCm39 Ensembl
GRCm381171,229,572 - 171,234,349 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,229,572 - 171,234,365 (-)EnsemblGRCm38mm10GRCm38
MGSCv371173,159,703 - 173,164,480 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361173,066,247 - 173,071,024 (-)NCBIMGSCv36mm8
Celera1173,677,711 - 173,690,567 (-)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,1-dichloroethene  (EXP)
1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
17beta-estradiol 3-benzoate  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,5-hexanedione  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetylsalicylic acid  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (ISO)
alpha-amanitin  (EXP)
alpha-Zearalanol  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsenous acid  (ISO)
beclomethasone  (ISO)
benzo[a]pyrene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (ISO)
bisphenol F  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
choline  (EXP)
cisplatin  (ISO)
citalopram  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (EXP)
D-glucose  (EXP)
dexamethasone  (EXP)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
diclofenac  (EXP)
diethylstilbestrol  (EXP)
diquat  (EXP)
diuron  (ISO)
fenbuconazole  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
ginkgolide B  (ISO)
glucose  (EXP)
ketotifen  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (EXP,ISO)
mercury atom  (EXP)
mercury(0)  (EXP)
methimazole  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (ISO)
nilotinib  (ISO)
ochratoxin A  (ISO)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
probucol  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
serpentine asbestos  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (ISO)
streptozocin  (ISO)
tamibarotene  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloromethane  (EXP)
thioacetamide  (ISO)
titanium dioxide  (EXP)
triphenyl phosphate  (ISO)
troglitazone  (EXP)
tungsten  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
antigen processing and presentation of exogenous peptide antigen via MHC class I  (IBA,IMP)
antigen processing and presentation of exogenous peptide antigen via MHC class II  (IBA,IMP)
cell surface receptor signaling pathway  (IEP,IMP)
cellular response to low-density lipoprotein particle stimulus  (IDA)
defense response to bacterium  (IBA,IMP)
Fc receptor mediated stimulatory signaling pathway  (IBA,IMP)
Fc-epsilon receptor signaling pathway  (IEA,ISO)
Fc-gamma receptor signaling pathway  (IBA,IDA)
immune system process  (IEA)
immunoglobulin mediated immune response  (IBA,IMP)
innate immune response  (IBA,IMP)
integrin-mediated signaling pathway  (IMP)
interleukin-3-mediated signaling pathway  (IMP)
mast cell activation  (IDA,IMP)
mast cell apoptotic process  (IDA,IMP)
mast cell degranulation  (IDA,IMP)
negative regulation of mast cell apoptotic process  (IDA,IMP)
neutrophil activation involved in immune response  (IBA,IMP)
neutrophil chemotaxis  (IBA,IMP)
osteoclast differentiation  (IMP)
phagocytosis, engulfment  (IMP)
positive regulation of immune response  (IMP)
positive regulation of interleukin-10 production  (IMP)
positive regulation of interleukin-4 production  (IMP)
positive regulation of interleukin-6 production  (IDA,IMP)
positive regulation of mast cell cytokine production  (IDA,IMP)
positive regulation of mast cell degranulation  (IDA,IMP)
positive regulation of phagocytosis  (IBA,IMP)
positive regulation of protein localization to cell surface  (IDA,IMP)
positive regulation of tumor necrosis factor production  (IDA,IMP)
positive regulation of type I hypersensitivity  (IMP)
positive regulation of type IIa hypersensitivity  (IMP)
positive regulation of type III hypersensitivity  (IMP)
protein localization to plasma membrane  (IDA)
receptor internalization  (IDA)
regulation of immune response  (IMP)
regulation of platelet activation  (IBA,IMP)
serotonin secretion by platelet  (IMP)
signal transduction  (IDA)
T cell differentiation involved in immune response  (IBA,IMP)

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal antigen presentation  (IAGP)
abnormal bone marrow cavity morphology  (IAGP)
abnormal bone structure  (IAGP)
abnormal CD4-positive, alpha-beta T cell physiology  (IAGP)
abnormal chemokine secretion  (IAGP)
abnormal cytokine level  (IAGP)
abnormal decidua basalis morphology  (IAGP)
abnormal dendritic cell antigen presentation  (IAGP)
abnormal effector T cell morphology  (IAGP)
abnormal glomerular capillary endothelium morphology  (IAGP)
abnormal hemoglobin  (IAGP)
abnormal immune cell physiology  (IAGP)
abnormal immunoglobulin level  (IAGP)
abnormal interferon-gamma secretion  (IAGP)
abnormal interleukin-17 secretion  (IAGP)
abnormal lipid level  (IAGP)
abnormal macrophage physiology  (IAGP)
abnormal mast cell physiology  (IAGP)
abnormal maternal decidual layer morphology  (IAGP)
abnormal NK cell physiology  (IAGP)
abnormal NK T cell physiology  (IAGP)
abnormal osteoclast differentiation  (IAGP)
abnormal osteoclast physiology  (IAGP)
abnormal platelet activation  (IAGP)
abnormal T cell activation  (IAGP)
abnormal T-helper 1 physiology  (IAGP)
abnormal trabecular bone morphology  (IAGP)
abnormal uterine spiral artery morphology  (IAGP)
abnormal uterine spiral artery remodeling  (IAGP)
absent gamma-delta intraepithelial T cell  (IAGP)
arteritis  (IAGP)
decreased apoptosis  (IAGP)
decreased body size  (IAGP)
decreased bone resorption  (IAGP)
decreased dendritic cell number  (IAGP)
decreased IgG level  (IAGP)
decreased IgG1 level  (IAGP)
decreased IgG2a level  (IAGP)
decreased IgG2b level  (IAGP)
decreased IgG3 level  (IAGP)
decreased inflammatory response  (IAGP)
decreased interferon-gamma secretion  (IAGP)
decreased interleukin-1 beta secretion  (IAGP)
decreased interleukin-10 secretion  (IAGP)
decreased interleukin-12b secretion  (IAGP)
decreased interleukin-2 secretion  (IAGP)
decreased interleukin-23 secretion  (IAGP)
decreased interleukin-6 secretion  (IAGP)
decreased mean corpuscular hemoglobin  (IEA)
decreased mean corpuscular volume  (IEA)
decreased myocardial infarct size  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased platelet aggregation  (IAGP)
decreased platelet calcium level  (IAGP)
decreased susceptibility to autoimmune diabetes  (IAGP)
decreased susceptibility to autoimmune hemolytic anemia  (IAGP)
decreased susceptibility to experimental autoimmune encephalomyelitis  (IAGP)
decreased susceptibility to induced morbidity/mortality  (IAGP)
decreased susceptibility to type I hypersensitivity reaction  (IAGP)
decreased susceptibility to type III hypersensitivity reaction  (IAGP)
decreased susceptibility to type IV hypersensitivity reaction  (IAGP)
decreased susceptibility to xenobiotic induced morbidity/mortality  (IAGP)
decreased T cell proliferation  (IAGP)
decreased thymocyte number  (IAGP)
decreased tumor necrosis factor secretion  (IAGP)
decreased uterine NK cell number  (IAGP)
enlarged placenta  (IAGP)
glomerular crescent  (IAGP)
glomerulonephritis  (IAGP)
hematoma  (IAGP)
impaired coordination  (IAGP)
impaired macrophage phagocytosis  (IAGP)
impaired natural killer cell mediated cytotoxicity  (IAGP)
increased anti-double stranded DNA antibody level  (IAGP)
increased bone mass  (IAGP)
increased diameter of femur  (IAGP)
increased double-negative T cell number  (IAGP)
increased IgE level  (IAGP)
increased IgG level  (IAGP)
increased immunoglobulin level  (IAGP)
increased kidney cell proliferation  (IAGP)
increased mesangial cell number  (IAGP)
increased spleen weight  (IAGP)
increased susceptibility to parasitic infection  (IAGP)
increased urine protein level  (IAGP)
kidney failure  (IAGP)
osteopetrosis  (IAGP)
premature death  (IAGP)
preweaning lethality, incomplete penetrance  (IEA)
reduced fertility  (IAGP)
round face  (IAGP)
short femur  (IAGP)
small placenta  (IAGP)
vascular inflammation  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Physical and transcriptional map of a 3-Mb region of mouse chromosome 1 containing the gene for the neural tube defect mutant loop-tail (Lp). Eddleston J, etal., Genomics 1999 Mar 1;56(2):149-59.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. MGD IEA MGD IEA
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
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PMID:11021533   PMID:11042159   PMID:11076861   PMID:11110699   PMID:11123272   PMID:11145695   PMID:11217851   PMID:11237803   PMID:11247825   PMID:11283158   PMID:11283678   PMID:11290762  
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PMID:16039578   PMID:16105983   PMID:16111637   PMID:16141072   PMID:16141073   PMID:16143986   PMID:16217038   PMID:16219796   PMID:16246361   PMID:16286018   PMID:16288049   PMID:16291591  
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PMID:17018854   PMID:17050534   PMID:17053192   PMID:17053833   PMID:17056570   PMID:17082647   PMID:17086186   PMID:17108042   PMID:17110603   PMID:17121989   PMID:17128269   PMID:17182584  
PMID:17182587   PMID:17202337   PMID:17202371   PMID:17239631   PMID:17255324   PMID:17277081   PMID:17290413   PMID:17317854   PMID:17360655   PMID:17371974   PMID:17374738   PMID:17380206  
PMID:17446931   PMID:17475849   PMID:17485663   PMID:17513736   PMID:17513778   PMID:17543387   PMID:17548593   PMID:17558411   PMID:17579074   PMID:17592115   PMID:17611621   PMID:17617565  
PMID:17664287   PMID:17767162   PMID:17934470   PMID:17984307   PMID:18063701   PMID:18070890   PMID:18081038   PMID:18097064   PMID:18198349   PMID:18209093   PMID:18227164   PMID:18256319  
PMID:18292558   PMID:18329366   PMID:18354234   PMID:18391000   PMID:18424711   PMID:18461563   PMID:18495787   PMID:18516038   PMID:18524992   PMID:18632582   PMID:18694873   PMID:18776906  
PMID:18794338   PMID:18809711   PMID:18832724   PMID:18941110   PMID:18949059   PMID:18974296   PMID:18983510   PMID:19059245   PMID:19098920   PMID:19124755   PMID:19139169   PMID:19155486  
PMID:19246339   PMID:19251634   PMID:19258597   PMID:19273622   PMID:19355789   PMID:19414806   PMID:19447681   PMID:19503107   PMID:19528347   PMID:19703985   PMID:19705113   PMID:19710463  
PMID:19770513   PMID:19795417   PMID:19805369   PMID:19913447   PMID:19949107   PMID:19965673   PMID:20008526   PMID:20133862   PMID:20138012   PMID:20138013   PMID:20148421   PMID:20164423  
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PMID:23112187   PMID:23150715   PMID:23219390   PMID:23237573   PMID:23313147   PMID:23345428   PMID:23345431   PMID:23395392   PMID:23509363   PMID:23545296   PMID:23555611   PMID:23602766  
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PMID:24177426   PMID:24194600   PMID:24210352   PMID:24210883   PMID:24244174   PMID:24293627   PMID:24334446   PMID:24335230   PMID:24337750   PMID:24391211   PMID:24401277   PMID:24412922  
PMID:24442438   PMID:24481753   PMID:24523933   PMID:24563255   PMID:24608040   PMID:24752483   PMID:25002751   PMID:25004110   PMID:25043618   PMID:25061875   PMID:25100742   PMID:25134989  
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PMID:25795918   PMID:25806513   PMID:25824719   PMID:25888641   PMID:25915733   PMID:25926454   PMID:26021803   PMID:26079812   PMID:26106150   PMID:26140582   PMID:26185093   PMID:26196745  
PMID:26208901   PMID:26216934   PMID:26392467   PMID:26407610   PMID:26453377   PMID:26619292   PMID:26787820   PMID:26929198   PMID:27059595   PMID:27066907   PMID:27100888   PMID:27181049  
PMID:27185938   PMID:27197149   PMID:27210762   PMID:27259855   PMID:27365531   PMID:27428827   PMID:27502165   PMID:27555460   PMID:27626380   PMID:27688803   PMID:27721447   PMID:27742545  
PMID:27765766   PMID:27837109   PMID:27887882   PMID:28053234   PMID:28084424   PMID:28089363   PMID:28165503   PMID:28218620   PMID:28264908   PMID:28373578   PMID:28389502   PMID:28424516  
PMID:28461494   PMID:28561280   PMID:28659358   PMID:28744004   PMID:28801234   PMID:28887040   PMID:29358324   PMID:29386115   PMID:29386381   PMID:29599777   PMID:29942300   PMID:30024985  
PMID:30033122   PMID:30185519   PMID:30250184   PMID:30373815   PMID:30397035   PMID:30446386   PMID:30474857   PMID:30498196   PMID:30535055   PMID:30779858   PMID:30877168   PMID:30910862  
PMID:30967512   PMID:31169521   PMID:31196979   PMID:31220194   PMID:31309159   PMID:31383641   PMID:31393930   PMID:31415574   PMID:31570755   PMID:31578241   PMID:31757864   PMID:31801071  
PMID:32195245   PMID:32255767   PMID:32392463   PMID:32554809   PMID:32579115   PMID:32582142   PMID:32733467   PMID:32910906   PMID:32991669   PMID:33058860   PMID:33117338   PMID:33839682  
PMID:33863984   PMID:34010642   PMID:34075727   PMID:34321999   PMID:34362877   PMID:34910922   PMID:35148840   PMID:35584674   PMID:36706760   PMID:36948194   PMID:36972444   PMID:37000623  
PMID:37488116   PMID:38096050   PMID:38175703   PMID:38354088   PMID:38355793   PMID:38409240   PMID:38418879   PMID:39013884  


Genomics

Comparative Map Data
Fcer1g
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391171,057,141 - 171,061,918 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1171,057,141 - 171,061,934 (-)EnsemblGRCm39 Ensembl
GRCm381171,229,572 - 171,234,349 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,229,572 - 171,234,365 (-)EnsemblGRCm38mm10GRCm38
MGSCv371173,159,703 - 173,164,480 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361173,066,247 - 173,071,024 (-)NCBIMGSCv36mm8
Celera1173,677,711 - 173,690,567 (-)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.23NCBI
FCER1G
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381161,215,295 - 161,219,245 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1161,215,234 - 161,220,699 (+)EnsemblGRCh38hg38GRCh38
GRCh371161,185,085 - 161,189,035 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,451,711 - 159,455,662 (+)NCBINCBI36Build 36hg18NCBI36
Build 341157,998,159 - 158,002,111NCBI
Celera1134,252,239 - 134,256,190 (+)NCBICelera
Cytogenetic Map1q23.3NCBI
HuRef1132,542,035 - 132,545,988 (+)NCBIHuRef
CHM1_11162,581,340 - 162,585,295 (+)NCBICHM1_1
T2T-CHM13v2.01160,352,747 - 160,356,700 (+)NCBIT2T-CHM13v2.0
Fcer1g
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81386,181,908 - 86,186,766 (-)NCBIGRCr8
mRatBN7.21383,649,447 - 83,654,248 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1383,649,449 - 83,671,443 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1386,155,292 - 86,160,092 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01387,553,532 - 87,558,332 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01384,785,150 - 84,789,956 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01389,601,894 - 89,606,326 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1389,601,896 - 89,606,326 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01394,228,759 - 94,233,459 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,119,464 - 87,123,902 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11387,308,348 - 87,312,727 (-)NCBI
Celera1383,280,630 - 83,285,062 (-)NCBICelera
Cytogenetic Map13q24NCBI
Fcer1g
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546812,971,931 - 12,975,206 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546812,971,931 - 12,975,206 (+)NCBIChiLan1.0ChiLan1.0
FCER1G
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2188,632,756 - 88,636,775 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1188,323,067 - 88,327,094 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01136,627,672 - 136,631,696 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11140,539,555 - 140,543,545 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,539,555 - 140,544,810 (+)Ensemblpanpan1.1panPan2
FCER1G
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13821,267,841 - 21,271,036 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3821,268,001 - 21,270,940 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3821,342,857 - 21,345,796 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03821,385,844 - 21,388,784 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3821,385,844 - 21,388,784 (-)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.03821,688,132 - 21,691,072 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03822,097,280 - 22,100,221 (-)NCBIUU_Cfam_GSD_1.0
Fcer1g
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,305,613 - 7,309,317 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936903514,761 - 517,948 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936903514,278 - 517,975 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FCER1G
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl489,242,472 - 89,246,450 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1489,242,467 - 89,246,344 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2497,099,149 - 97,103,026 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FCER1G
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,763,412 - 2,767,774 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl202,763,417 - 2,767,248 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660381,811,779 - 1,815,687 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fcer1g
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624794168,564 - 172,034 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624794168,564 - 172,433 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fcer1g
174 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:359
Count of miRNA genes:281
Interacting mature miRNAs:300
Transcripts:ENSMUST00000079957, ENSMUST00000150997
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
1302037Nktcn1_mnatural killer T cell numbers 1 (mouse)Not determined1168186243171632257Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
4141878Qrr1_mQTL rich region on chromosome 1 (mouse)Not determined170878743175320066Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357854Sle16_msystematic lupus erythematosus susceptibility 16 (mouse)Not determined1169038741177377587Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
1301016Szs1_mseizure susceptibility 1 (mouse)Not determined1170878743174456436Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160097157194097157Mouse
1301251Scc3_mcolon tumor susceptibility 3 (mouse)Not determined1168213823195154279Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157456299191456436Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157456299191456436Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1162977097185994196Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
10412205Bbaa30_mB.burgdorferi-associated arthritis 30 (mouse)Not determined1169038741174456436Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160112768194112883Mouse
1301333Mop3_mmorphine preference 3 (mouse)Not determined1167756737189303617Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1165873675195154279Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162145207194111528Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined155831765189831892Mouse
12792983Liq1_mlimb inflammation QTL 1 (mouse)1167586086191225397Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155582237185994196Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158468817192468938Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155716221189716369Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155716221189716369Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1155831765189831892Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157456299191456436Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155721528189722608Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158468817192468938Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153557406175468938Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156602037176262693Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147125258171632257Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141095010175095156Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
38456000Lick2_mlick rate 2, sucralose (mouse)1170397438173397435Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164143227190534272Mouse
38456001Lick1_mlick rate 1, water (mouse)1170397438173397435Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142489543176489734Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141233173175233272Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1155831765189831892Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161201261195154279Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167462514195154279Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156602037189303617Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167462514195154279Mouse
1301132Mors1_mmodifier of obesity related sterility 1 (mouse)Not determined1170379500195154279Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
13452393Ity3b_mimmunity to S. typhimurium 3b (mouse)1156497439172097436Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159262573193262693Mouse
1302201Alcw1_malcohol withdrawal 1 (mouse)Not determined1170868354171966357Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155716221189716369Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158468817192468938Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157456299191456436Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141233173175233272Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158468817192468938Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158468817192468938Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158468817192468938Mouse
4142065Bmd5b_mbone mineral density 5b (mouse)Not determined168835111171765633Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141233173175233272Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156602037189303617Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143284665177284803Mouse
13207571Tcq11_mtotal cholesterol QTL 11 (mouse)1169137569179647565Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1155831765189831892Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155525623189527533Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167462514195154279Mouse
13207587Mwmlpt1_mMorris water maze latency to platform, training, 1 (mouse)1169597438173397435Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
13207591Mwmlpa1_mMorris water maze latency to platform, all, 1 (mouse)1169797438173297435Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157456299191456436Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157456299191456436Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141233173175233272Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse

Markers in Region
RH124203  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,234,902 - 171,235,019UniSTSGRCm38
MGSCv371173,165,033 - 173,165,150UniSTSGRCm37
Celera1173,691,120 - 173,691,241UniSTS
Cytogenetic Map1H3UniSTS
cM Map193.3UniSTS
AI573376  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,229,588 - 171,229,719UniSTSGRCm38
MGSCv371173,159,719 - 173,159,850UniSTSGRCm37
Celera1173,677,727 - 173,677,858UniSTS
Cytogenetic Map1H3UniSTS
cM Map193.3UniSTS
Whitehead/MRC_RH12161.01UniSTS
UniSTS:224644  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,229,625 - 171,229,804UniSTSGRCm38
MGSCv371173,159,756 - 173,159,935UniSTSGRCm37
Celera1173,677,764 - 173,677,930UniSTS
Cytogenetic Map1H3UniSTS
cM Map193.3UniSTS
Fcer1g  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,229,578 - 171,229,722UniSTSGRCm38
MGSCv371173,159,709 - 173,159,853UniSTSGRCm37
Celera1173,677,717 - 173,677,861UniSTS
Cytogenetic Map1H3UniSTS
cM Map193.3UniSTS
Ndufs2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,234,905 - 171,235,020UniSTSGRCm38
MGSCv371173,165,036 - 173,165,151UniSTSGRCm37
Celera1173,691,123 - 173,691,242UniSTS
Cytogenetic Map1H3UniSTS
cM Map1 UniSTS


Sequence


Ensembl Acc Id: ENSMUST00000079957   ⟹   ENSMUSP00000078875
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1171,057,141 - 171,061,934 (-)Ensembl
GRCm38.p6 Ensembl1171,229,572 - 171,234,365 (-)Ensembl
Ensembl Acc Id: ENSMUST00000150997
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1171,058,620 - 171,061,908 (-)Ensembl
GRCm38.p6 Ensembl1171,231,051 - 171,234,339 (-)Ensembl
Ensembl Acc Id: ENSMUST00000193973   ⟹   ENSMUSP00000141240
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1171,057,148 - 171,061,876 (-)Ensembl
GRCm38.p6 Ensembl1171,229,579 - 171,234,307 (-)Ensembl
RefSeq Acc Id: NM_010185   ⟹   NP_034315
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391171,057,141 - 171,061,918 (-)NCBI
GRCm381171,229,572 - 171,234,349 (-)NCBI
MGSCv371173,159,703 - 173,164,480 (-)RGD
Celera1173,677,711 - 173,690,567 (-)RGD
cM Map1 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_034315 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37602 (Get FASTA)   NCBI Sequence Viewer  
  AAH34163 (Get FASTA)   NCBI Sequence Viewer  
  BAE33340 (Get FASTA)   NCBI Sequence Viewer  
  EDL39117 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000078875
  ENSMUSP00000078875.7
  ENSMUSP00000141240.2
GenBank Protein P20491 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034315   ⟸   NM_010185
- Peptide Label: precursor
- UniProtKB: P20491 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000078875   ⟸   ENSMUST00000079957
Ensembl Acc Id: ENSMUSP00000141240   ⟸   ENSMUST00000193973
Protein Domains
ITAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P20491-F1-model_v2 AlphaFold P20491 1-86 view protein structure

Promoters
RGD ID:6875662
Promoter ID:EPDNEW_M1282
Type:initiation region
Name:Fcer1g_1
Description:Mus musculus Fc receptor, IgE, high affinity I, gamma polypeptide, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381171,234,307 - 171,234,367EPDNEW
RGD ID:6848934
Promoter ID:MM_XEF:459
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:NM_001100106
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361173,161,046 - 173,161,546 (-)MPROMDB
RGD ID:6817723
Promoter ID:MM_KWN:2832
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:OTTMUST00000050975,   OTTMUST00000050976
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361173,164,046 - 173,164,546 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95496 AgrOrtholog
Ensembl Genes ENSMUSG00000058715 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000079957 ENTREZGENE
  ENSMUST00000079957.12 UniProtKB/Swiss-Prot
  ENSMUST00000193973.2 UniProtKB/TrEMBL
InterPro CD3_zeta/IgE_Fc_rcpt_gamma UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FCER1G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phos_immunorcpt_sig_ITAM UniProtKB/Swiss-Prot
KEGG Report mmu:14127 UniProtKB/Swiss-Prot
MGD MGI:95496 ENTREZGENE
NCBI Gene 14127 ENTREZGENE
PANTHER HIGH AFFINITY IMMUNOGLOBULIN EPSILON RECEPTOR SUBUNIT GAMMA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR16803 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ITAM UniProtKB/Swiss-Prot
  TCR_zetazeta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fcer1g PhenoGen
PROSITE ITAM_1 UniProtKB/Swiss-Prot
SMART ITAM UniProtKB/Swiss-Prot
UniProt A0A0A6YVS1_MOUSE UniProtKB/TrEMBL
  FCERG_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE