Sdhc (succinate dehydrogenase complex, subunit C, integral membrane protein) - Rat Genome Database

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Gene: Sdhc (succinate dehydrogenase complex, subunit C, integral membrane protein) Mus musculus
Analyze
Symbol: Sdhc
Name: succinate dehydrogenase complex, subunit C, integral membrane protein
RGD ID: 1553681
MGI Page MGI
Description: Predicted to have electron transfer activity; metal ion binding activity; and succinate dehydrogenase activity. Predicted to be involved in mitochondrial electron transport, succinate to ubiquinone. Localizes to mitochondrion. Is expressed in several structures, including alimentary system; brain; cardiovascular system; genitourinary system; and sensory organ. Used to study Leigh disease. Human ortholog(s) of this gene implicated in Carney-Stratakis syndrome; gastrointestinal stromal tumor; and paraganglioma. Orthologous to human SDHC (succinate dehydrogenase complex subunit C); PARTICIPATES IN citric acid cycle pathway; electron transport chain pathway; fumaric aciduria pathway; INTERACTS WITH (+)-dexrazoxane; 1,2-dichloroethane; 1,2-dimethylhydrazine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 0610010E03Rik; AI316496; AU019277; integral membrane protein CII-3; MGC103103; QPs-1; QPs1; succinate dehydrogenase cytochrome b560 subunit, mitochondrial
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,956,726 - 170,978,209 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,954,734 - 170,978,172 (-)Ensembl
GRCm381171,129,157 - 171,150,640 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,127,165 - 171,150,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv371173,059,288 - 173,080,734 (-)NCBIGRCm37mm9NCBIm37
MGSCv361172,965,840 - 172,987,277 (-)NCBImm8
Celera1173,578,731 - 173,598,849 (-)NCBICelera
Cytogenetic Map1H3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10512203   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12676762   PMID:12904583   PMID:12925748   PMID:14610273   PMID:14681479   PMID:15489334  
PMID:15597075   PMID:15741512   PMID:15840001   PMID:16120479   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17626619   PMID:18554416   PMID:18614015   PMID:18799693   PMID:19808025  
PMID:21677750   PMID:21873635   PMID:23142169   PMID:24194600   PMID:25290690   PMID:25737280   PMID:25985299   PMID:27215380   PMID:27623715   PMID:27626380   PMID:28204537   PMID:28245920  
PMID:28619824   PMID:31469588   PMID:33247500  


Genomics

Comparative Map Data
Sdhc
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391170,956,726 - 170,978,209 (-)NCBIGRCm39mm39
GRCm39 Ensembl1170,954,734 - 170,978,172 (-)Ensembl
GRCm381171,129,157 - 171,150,640 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1171,127,165 - 171,150,603 (-)EnsemblGRCm38mm10GRCm38
MGSCv371173,059,288 - 173,080,734 (-)NCBIGRCm37mm9NCBIm37
MGSCv361172,965,840 - 172,987,277 (-)NCBImm8
Celera1173,578,731 - 173,598,849 (-)NCBICelera
Cytogenetic Map1H3NCBI
SDHC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1161,314,381 - 161,363,206 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1161,314,381 - 161,371,964 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p13 Ensembl1161,314,257 - 161,375,340 (+)EnsemblGRCh38hg38GRCh38
GRCh381161,314,381 - 161,375,340 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371161,284,171 - 161,345,130 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361159,550,790 - 159,601,165 (+)NCBINCBI36hg18NCBI36
Build 341158,097,242 - 158,146,049NCBI
Celera1134,351,304 - 134,401,671 (+)NCBI
Cytogenetic Map1q23.3NCBI
HuRef1132,641,002 - 132,691,319 (+)NCBIHuRef
CHM1_11162,680,387 - 162,730,796 (+)NCBICHM1_1
Sdhc
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21383,544,652 - 83,565,560 (-)NCBI
Rnor_6.0 Ensembl1389,498,048 - 89,518,939 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01389,498,047 - 89,518,979 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01394,125,548 - 94,146,440 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41387,014,569 - 87,035,239 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11387,203,453 - 87,224,123 (-)NCBI
Celera1383,176,204 - 83,197,047 (-)NCBICelera
Cytogenetic Map13q24NCBI
Sdhc
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546813,049,848 - 13,083,156 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495546813,050,359 - 13,083,932 (+)NCBIChiLan1.0ChiLan1.0
SDHC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11140,635,250 - 140,683,390 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1140,635,685 - 140,682,736 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01136,724,663 - 136,773,038 (+)NCBIMhudiblu_PPA_v0panPan3
SDHC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13821,162,850 - 21,200,429 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3821,162,421 - 21,200,333 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3821,237,330 - 21,275,269 (-)NCBI
ROS_Cfam_1.03821,280,197 - 21,318,198 (-)NCBI
UMICH_Zoey_3.13821,177,285 - 21,215,371 (-)NCBI
UNSW_CanFamBas_1.03821,583,510 - 21,621,477 (-)NCBI
UU_Cfam_GSD_1.03821,991,569 - 22,029,750 (-)NCBI
Sdhc
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050587,383,971 - 7,428,187 (+)NCBI
SpeTri2.0NW_004936903592,641 - 636,845 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SDHC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl489,130,355 - 89,169,121 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1489,135,410 - 89,169,164 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2496,992,639 - 97,026,545 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SDHC
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1202,613,618 - 2,658,374 (-)NCBI
Sdhc
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462479455,907 - 97,991 (-)NCBI

Position Markers
RH136553  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,129,509 - 171,129,681UniSTSGRCm38
MGSCv371173,059,640 - 173,059,812UniSTSGRCm37
Celera1173,579,085 - 173,579,257UniSTS
Cytogenetic Map1H3UniSTS
24.MMHAP87FRH9.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,152,162 - 171,152,333UniSTSGRCm38
MGSCv371173,082,293 - 173,082,464UniSTSGRCm37
Celera1173,600,409 - 173,600,580UniSTS
Cytogenetic Map1H3UniSTS
cM Map192.4UniSTS
Whitehead_YAC1 UniSTS
AI316496  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,129,611 - 171,129,691UniSTSGRCm38
MGSCv371173,059,742 - 173,059,822UniSTSGRCm37
Celera1173,579,187 - 173,579,267UniSTS
Cytogenetic Map1H3UniSTS
Whitehead/MRC_RH12123.41UniSTS
Sdhc  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H3UniSTS
cM Map1 UniSTS
AW742715  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381171,129,343 - 171,129,591UniSTSGRCm38
MGSCv371173,059,474 - 173,059,722UniSTSGRCm37
Celera1173,578,919 - 173,579,167UniSTS
Cytogenetic Map1H3UniSTS
Whitehead/MRC_RH12123.31UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128800000181500000Mouse
1300837Vmbic1_mventral midbrain iron content 1 (mouse)Not determined1139624618173624738Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139624618173624738Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139774467173774646Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139774467173774646Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139774467173774646Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139774467173774646Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139774467173774646Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139774467173774646Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139774467173774646Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139774467173774646Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141267440175267586Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141405603175405702Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141405603175405702Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141405603175405702Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141405603175405702Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142661973176662164Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143457095177457233Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144621573178621573Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144703778178704023Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145250061179250061Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145317638179317756Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147249520171804689Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147249520183092234Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147249520189251027Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147391821181391821Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147391821181391821Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9148047933182048047Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1148047933182048047Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150317922188627115Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150317922188627115Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150317922188627115Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150929168184929353Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151358674185358833Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined152007542186007711Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152211172186211344Mouse
4142119Bpq21_mblood pressure QTL 21 (mouse)Not determined1152211172186211344Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152211172186211344Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152211172186211344Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152211172186211344Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152211172186211344Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152305175186305175Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152305175186305175Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152919071186706423Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153681660175641372Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153848421187848536Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153885284187885284Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154582944188582944Mouse
1301164Tir3c_mtrypansomiasis infection response 3c (mouse)Not determined1154804480188804689Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155175373189175373Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155698056189699966Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155699229189699330Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155706491186261999Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155888654189888802Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155888654189888802Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155888654189888802Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155893961189895041Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined156004198190004325Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1156004198190004325Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1156004198190004325Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1156004198190004325Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156774467176435127Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156774467189571420Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156774467189571420Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157628733191628870Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157628733191628870Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157628733191628870Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157628733191628870Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157628733191628870Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157628733191628870Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157628733191628870Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158641251192641372Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158641251192641372Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158641251192641372Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158641251192641372Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158641251192641372Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158641251192641372Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159435007193435127Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160269591194269591Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160269591194269591Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160285202194285317Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161373696195373830Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162317638194429220Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1163149528186261999Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164315658190802075Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1166092111195471971Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167730317195471971Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167730317195471971Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167730317195471971Mouse
12792983Liq1_mlimb inflammation QTL 1 (mouse)1167758517191493284Mouse
1301333Mop3_mmorphine preference 3 (mouse)Not determined1167929168189571420Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1168222387195471971Mouse
1302037Nktcn1_mnatural killer T cell numbers 1 (mouse)Not determined1168358674171804689Mouse
1301251Scc3_mcolon tumor susceptibility 3 (mouse)Not determined1168481626195471971Mouse
4142065Bmd5b_mbone mineral density 5b (mouse)Not determined169007542171938066Mouse
10412205Bbaa30_mB.burgdorferi-associated arthritis 30 (mouse)Not determined1169211172174628870Mouse
1357854Sle16_msystematic lupus erythematosus susceptibility 16 (mouse)Not determined1169211172177550021Mouse
13207571Tcq11_mtotal cholesterol QTL 11 (mouse)1169310000179820000Mouse
1301132Mors1_mmodifier of obesity related sterility 1 (mouse)Not determined1170647303195471971Mouse
1302201Alcw1_malcohol withdrawal 1 (mouse)Not determined1171040785172138790Mouse
1301016Szs1_mseizure susceptibility 1 (mouse)Not determined1171051174174628870Mouse
4141878Qrr1_mQTL rich region on chromosome 1 (mouse)Not determined171051174175492500Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1116
Count of miRNA genes:576
Interacting mature miRNAs:683
Transcripts:ENSMUST00000081560, ENSMUST00000111336, ENSMUST00000155798
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000081560   ⟹   ENSMUSP00000080273
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,129,407 - 171,150,591 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111336   ⟹   ENSMUSP00000106968
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,127,165 - 171,150,603 (-)Ensembl
RefSeq Acc Id: ENSMUST00000155798   ⟹   ENSMUSP00000122062
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1171,138,726 - 171,150,588 (-)Ensembl
RefSeq Acc Id: NM_025321   ⟹   NP_079597
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,956,726 - 170,978,172 (-)NCBI
GRCm381171,129,157 - 171,150,603 (-)NCBI
MGSCv371173,059,288 - 173,080,734 (-)RGD
Celera1173,578,731 - 173,598,849 (-)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006496955   ⟹   XP_006497018
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,956,733 - 170,978,209 (-)NCBI
GRCm381171,129,164 - 171,150,640 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030241961   ⟹   XP_030097821
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391170,956,733 - 170,978,167 (-)NCBI
GRCm381171,129,164 - 171,150,598 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_079597   ⟸   NM_025321
- Peptide Label: precursor
- UniProtKB: Q9CZB0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006497018   ⟸   XM_006496955
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030097821   ⟸   XM_030241961
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000106968   ⟸   ENSMUST00000111336
RefSeq Acc Id: ENSMUSP00000080273   ⟸   ENSMUST00000081560
RefSeq Acc Id: ENSMUSP00000122062   ⟸   ENSMUST00000155798

Promoters
RGD ID:6875650
Promoter ID:EPDNEW_M1276
Type:multiple initiation site
Name:Sdhc_1
Description:Mus musculus succinate dehydrogenase complex, subunit C, integralmembrane protein , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381171,150,603 - 171,150,663EPDNEW
RGD ID:6818115
Promoter ID:MM_KWN:2824
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000081560,   OTTMUST00000051092,   OTTMUST00000051420,   OTTMUST00000051422
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361173,079,621 - 173,081,332 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1913302 AgrOrtholog
Ensembl Genes ENSMUSG00000058076 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000080273 UniProtKB/TrEMBL
  ENSMUSP00000106968 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000122062 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081560 UniProtKB/TrEMBL
  ENSMUST00000111336 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000155798 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1300.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro SQR/QFR_C/D UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succ_DH_cyt_bsu_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Succ_DH_cytb556 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SuccDH_FuR_B_TM-su UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:66052 UniProtKB/Swiss-Prot
MGD MGI:1913302 ENTREZGENE
NCBI Gene 66052 ENTREZGENE
Pfam Sdh_cyt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sdhc PhenoGen
PIRSF SDH_cyt_b560 UniProtKB/TrEMBL
PROSITE SDH_CYT_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SDH_CYT_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81343 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs succ_dehyd_cytB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C560_MOUSE UniProtKB/Swiss-Prot
  D3Z1A8_MOUSE UniProtKB/TrEMBL
  F8WGB3_MOUSE UniProtKB/TrEMBL
  Q5XK33_MOUSE UniProtKB/TrEMBL
  Q9CZB0 ENTREZGENE
UniProt Secondary Q544Q9 UniProtKB/Swiss-Prot
  Q99JP2 UniProtKB/Swiss-Prot
  Q9DCU7 UniProtKB/Swiss-Prot