Atp1b1 (ATPase, Na+/K+ transporting, beta 1 polypeptide) - Rat Genome Database

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Gene: Atp1b1 (ATPase, Na+/K+ transporting, beta 1 polypeptide) Mus musculus
Analyze
Symbol: Atp1b1
Name: ATPase, Na+/K+ transporting, beta 1 polypeptide
RGD ID: 731614
MGI Page MGI
Description: Enables ATPase activator activity; protein C-terminus binding activity; and protein kinase binding activity. Involved in several processes, including inorganic cation transmembrane transport; positive regulation of sodium ion transmembrane transporter activity; and protein stabilization. Acts upstream of or within blastocyst development. Located in several cellular components, including basolateral plasma membrane; intercalated disc; and sarcolemma. Part of sodium:potassium-exchanging ATPase complex. Is expressed in several structures, including central nervous system; genitourinary system; gut; heart and pericardium; and respiratory system. Human ortholog(s) of this gene implicated in essential hypertension. Orthologous to human ATP1B1 (ATPase Na+/K+ transporting subunit beta 1).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: At; Atp4b; Atpb; Atpb-1; NKbeta1; sodium/potassium ATPase beta subunit; sodium/potassium-dependent ATPase subunit beta-1; sodium/potassium-transporting ATPase subunit beta-1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,264,668 - 164,285,924 (-)NCBIGRCm39mm39
GRCm39 Ensembl1164,264,678 - 164,285,924 (-)Ensembl
GRCm381164,437,099 - 164,458,355 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1164,437,109 - 164,458,355 (-)EnsemblGRCm38mm10GRCm38
MGSCv371166,367,398 - 166,388,486 (-)NCBIGRCm37mm9NCBIm37
MGSCv361166,273,942 - 166,295,030 (-)NCBImm8
Celera1166,878,624 - 166,899,734 (-)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map171.75NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(R)-lipoic acid  (EXP)
1,2-dimethylhydrazine  (EXP)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-butoxyethanol  (EXP)
2-methylcholine  (ISO)
3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine  (ISO)
3-chloropropane-1,2-diol  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4-hydroxyphenyl retinamide  (EXP)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (ISO)
5-aza-2'-deoxycytidine  (ISO)
9-cis-retinoic acid  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP)
arsenous acid  (ISO)
astemizole  (ISO)
atrazine  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bexarotene  (ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
calcidiol  (ISO)
calcitriol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP,ISO)
chloroprene  (EXP,ISO)
choline  (EXP)
chromium(6+)  (EXP,ISO)
ciglitazone  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
coumestrol  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
cytarabine  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
dibutyl phthalate  (EXP,ISO)
diethylstilbestrol  (EXP)
dimethyl sulfoxide  (ISO)
dioxygen  (ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
ethanol  (ISO)
flutamide  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
fructose  (ISO)
furan  (ISO)
genistein  (ISO)
glafenine  (ISO)
glutathione  (ISO)
haloperidol  (ISO)
heparin  (ISO)
isoflavones  (ISO)
isoniazide  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lead(0)  (ISO)
lead(2+)  (ISO)
lipoic acid  (EXP)
lipopolysaccharide  (ISO)
lycopene  (EXP)
methoxychlor  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
mirex  (ISO)
N-nitrosodiethylamine  (ISO)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
nickel atom  (ISO)
nickel sulfate  (EXP)
nimesulide  (ISO)
ochratoxin A  (ISO)
ouabain  (ISO)
oxaliplatin  (ISO)
oxycodone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
PCB138  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
phenylephrine  (ISO)
phenylmercury acetate  (ISO)
phorbol 13-acetate 12-myristate  (ISO)
picoxystrobin  (ISO)
pirinixic acid  (EXP,ISO)
piroxicam  (ISO)
potassium bromate  (ISO)
potassium chromate  (ISO)
potassium dichromate  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (ISO)
pyrogallol  (EXP)
quartz  (ISO)
quercetin  (EXP)
ranitidine  (ISO)
resveratrol  (EXP)
rotenone  (ISO)
sarin  (ISO)
SB 431542  (ISO)
silicon dioxide  (ISO)
sodium dichromate  (EXP)
succimer  (EXP)
tacedinaline  (ISO)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
tebufenpyrad  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP)
thapsigargin  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichloroethene  (EXP)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
acebutolol pharmacodynamics pathway  (ISO)
adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway  (ISO)
aldosterone signaling pathway  (IEA)
alfentanil pharmacodynamics pathway  (ISO)
amiloride pharmacodynamics pathway  (ISO)
amiodarone pharmacodynamics pathway  (ISO)
amlodipine pharmacodynamics pathway  (ISO)
atenolol pharmacodynamics pathway  (ISO)
bendroflumethiazide pharmacodynamics pathway  (ISO)
betaxolol pharmacodynamics pathway  (ISO)
bile acid transport pathway  (IEA)
bisoprolol pharmacodynamics pathway  (ISO)
bumetanide pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
bupranolol drug pathway  (ISO)
bupranolol pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
carvedilol pharmacodynamics pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
chlorothiazide pharmacodynamics pathway  (ISO)
chlorthalidone pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
cystinuria pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diltiazem pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
disopyramide pharmacodynamics pathway  (ISO)
dobutamine pharmacodynamics pathway  (ISO)
eplerenone pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
esmolol pharmacodynamics pathway  (ISO)
etacrynic acid pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
flecainde pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
fosphenytoin pharmacodynamics pathway  (ISO)
furosemide pharmacodynamics pathway  (ISO)
Hartnup disease pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrochlorothiazide pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydroflumethiazide pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
ibutilide pharmacodynamics pathway  (ISO)
iminoglycinuria pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
isoprenaline pharmacodynamics pathway  (ISO)
isradipine pharmacodynamics pathway  (ISO)
lactose degradation pathway  (ISO)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobunolol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
lysinuric protein intolerance pathway  (ISO)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
metolazone pharmacodynamics pathway  (ISO)
metoprolol pharmacodynamics pathway  (ISO)
mexiletine pharmacodynamics pathway  (ISO)
nadolol pharmacodynamics pathway  (ISO)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nebivolol pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
nifedipine pharmacodynamics pathway  (ISO)
nimodipine pharmacodynamics pathway  (ISO)
nisoldipine pharmacodynamics pathway  (ISO)
nitrendipine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
penbutolol pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
phenytoin pharmacodynamics pathway  (ISO)
pindolol pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procainamide pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
propranolol pharmacodynamics pathway  (ISO)
quinidine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
sotalol pharmacodynamics pathway  (ISO)
spironolactone pharmacodynamics pathway  (ISO)
timolol pharmacodynamics pathway  (ISO)
torasemide pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)
trehalose degradation pathway  (ISO)
triamterene pharmacodynamics pathway  (ISO)
trichlormethiazide pharmacodynamics pathway  (ISO)
verapamil pharmacodynamics pathway  (ISO)

References

Additional References at PubMed
PMID:1301170   PMID:1694218   PMID:2557580   PMID:2574151   PMID:2842249   PMID:2885848   PMID:7495297   PMID:7573462   PMID:7607671   PMID:7961179   PMID:8070621   PMID:8921962  
PMID:9507200   PMID:9801359   PMID:10349636   PMID:10547923   PMID:10837135   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11591489   PMID:12106288   PMID:12397396   PMID:12477932  
PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15146195   PMID:15459171   PMID:15489334   PMID:15705719   PMID:16135750   PMID:16141072   PMID:16141073   PMID:16400024  
PMID:16602821   PMID:17317668   PMID:17444492   PMID:17606467   PMID:17634366   PMID:17947299   PMID:17967808   PMID:18096156   PMID:18287559   PMID:18621045   PMID:19487957   PMID:19521500  
PMID:19683723   PMID:19723774   PMID:19729011   PMID:20826529   PMID:21267068   PMID:21677750   PMID:21705333   PMID:21862448   PMID:21873635   PMID:21947380   PMID:22079573   PMID:22310113  
PMID:22696220   PMID:23048038   PMID:23221637   PMID:23392350   PMID:23534996   PMID:23676500   PMID:23791728   PMID:25012180   PMID:25044020   PMID:25382142   PMID:25975898   PMID:27064541  
PMID:27518902   PMID:28378742   PMID:28515087   PMID:28706196   PMID:28746879   PMID:28994389   PMID:29237738   PMID:30012868   PMID:30029086   PMID:30068389   PMID:30160348   PMID:30562941  
PMID:32325033  


Genomics

Comparative Map Data
Atp1b1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391164,264,668 - 164,285,924 (-)NCBIGRCm39mm39
GRCm39 Ensembl1164,264,678 - 164,285,924 (-)Ensembl
GRCm381164,437,099 - 164,458,355 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1164,437,109 - 164,458,355 (-)EnsemblGRCm38mm10GRCm38
MGSCv371166,367,398 - 166,388,486 (-)NCBIGRCm37mm9NCBIm37
MGSCv361166,273,942 - 166,295,030 (-)NCBImm8
Celera1166,878,624 - 166,899,734 (-)NCBICelera
Cytogenetic Map1H2.2NCBI
cM Map171.75NCBI
ATP1B1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1169,105,697 - 169,132,722 (+)EnsemblGRCh38hg38GRCh38
GRCh381169,106,690 - 169,132,719 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371169,075,928 - 169,101,957 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361167,342,571 - 167,368,584 (+)NCBINCBI36hg18NCBI36
Build 341165,807,604 - 165,833,618NCBI
Celera1142,186,000 - 142,212,016 (+)NCBI
Cytogenetic Map1q24.2NCBI
HuRef1140,321,997 - 140,348,078 (+)NCBIHuRef
CHM1_11170,498,009 - 170,524,021 (+)NCBICHM1_1
Atp1b1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21376,786,580 - 76,807,096 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1376,786,578 - 76,807,459 (-)Ensembl
Rnor_6.01382,737,161 - 82,757,681 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,737,159 - 82,758,004 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01387,621,447 - 87,641,967 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41380,214,056 - 80,234,576 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11380,228,241 - 80,249,087 (-)NCBI
Celera1376,517,954 - 76,538,475 (-)NCBICelera
RH 3.4 Map13485.8RGD
Cytogenetic Map13q23NCBI
Atp1b1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554628,073,679 - 8,094,880 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554628,072,519 - 8,095,311 (-)NCBIChiLan1.0ChiLan1.0
ATP1B1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11148,314,700 - 148,343,205 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1148,314,793 - 148,342,050 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01144,592,667 - 144,621,052 (+)NCBIMhudiblu_PPA_v0panPan3
ATP1B1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1729,464,132 - 29,487,124 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl729,464,132 - 29,487,947 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha728,995,904 - 29,019,080 (-)NCBI
ROS_Cfam_1.0729,266,289 - 29,289,513 (-)NCBI
UMICH_Zoey_3.1729,114,027 - 29,137,166 (-)NCBI
UNSW_CanFamBas_1.0729,155,842 - 29,179,013 (-)NCBI
UU_Cfam_GSD_1.0729,386,814 - 29,410,001 (-)NCBI
Atp1b1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934499,591,400 - 99,613,578 (-)NCBI
SpeTri2.0NW_00493648117,438,146 - 17,460,329 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ATP1B1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl481,911,558 - 81,997,714 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1481,912,543 - 81,937,015 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2489,530,583 - 89,550,423 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap4q1.3-q2.1NCBI
ATP1B1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12559,898,745 - 59,925,166 (-)NCBIChlSab1.1chlSab2
ChlSab1.12559,898,745 - 59,925,166 (-)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2559,895,341 - 59,925,522 (-)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605561,575,309 - 61,602,086 (-)NCBIVero_WHO_p1.0
Atp1b1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248267,058,046 - 7,076,919 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
Atp1b1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1H2.2UniSTS
cM Map186.8UniSTS
RH94466  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,437,633 - 164,437,834UniSTSGRCm38
MGSCv371166,367,764 - 166,367,965UniSTSGRCm37
Celera1166,878,990 - 166,879,191UniSTS
Cytogenetic Map1H2.2UniSTS
UniSTS:225347  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381164,437,406 - 164,437,583UniSTSGRCm38
MGSCv371166,367,537 - 166,367,714UniSTSGRCm37
Celera1166,878,763 - 166,878,940UniSTS
Cytogenetic Map1H2.2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121800000165000000Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122100000165000000Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128800000181500000Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131228571165311895Mouse
14746980Manh50_mmandible shape 50 (mouse)1134255813168255813Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135919071169919261Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1136002150170002264Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136334204170334348Mouse
1300837Vmbic1_mventral midbrain iron content 1 (mouse)Not determined1139624618173624738Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139624618173624738Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139774467173774646Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139774467173774646Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139774467173774646Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139774467173774646Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139774467173774646Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139774467173774646Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139774467173774646Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139774467173774646Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141267440175267586Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141405603175405702Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141405603175405702Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141405603175405702Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141405603175405702Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142661973176662164Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143457095177457233Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144621573178621573Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144703778178704023Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145250061179250061Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145317638179317756Mouse
1301818Ap1q_malcohol preference 1 QTL (mouse)Not determined1147032461167758653Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147249520169211344Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147249520171804689Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147249520183092234Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147249520189251027Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147391821181391821Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147391821181391821Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9148047933182048047Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1148047933182048047Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150317922188627115Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150317922188627115Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150317922188627115Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150929168184929353Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151358674185358833Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined152007542186007711Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152211172186211344Mouse
4142119Bpq21_mblood pressure QTL 21 (mouse)Not determined1152211172186211344Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152211172186211344Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152211172186211344Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152211172186211344Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152211172186211344Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152305175186305175Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152305175186305175Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152919071186706423Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153681660175641372Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153848421187848536Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153885284187885284Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154582944188582944Mouse
1301164Tir3c_mtrypansomiasis infection response 3c (mouse)Not determined1154804480188804689Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155175373189175373Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155175373189175373Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155698056189699966Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155699229189699330Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155706491186261999Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155888654189888802Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155888654189888802Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155888654189888802Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155893961189895041Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined156004198190004325Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1156004198190004325Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1156004198190004325Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1156004198190004325Mouse
1301232Hcs7_mhepatocarcinogenesis susceptibility 7 (mouse)Not determined1156774467168358833Mouse
13452394Leusq1_mleucocytosis susceptibility QTL 1 (mouse)1156774467168358833Mouse
13452397Leusq4_mleucocytosis susceptibility QTL 4 (mouse)1156774467170976071Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156774467176435127Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156774467189571420Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156774467189571420Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157628733191628870Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157628733191628870Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157628733191628870Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157628733191628870Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157628733191628870Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157628733191628870Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157628733191628870Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158641251192641372Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158641251192641372Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158641251192641372Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158641251192641372Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158641251192641372Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158641251192641372Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159435007193435127Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160269591194269591Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160269591194269591Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160285202194285317Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161373696195373830Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162317638194429220Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1163149528186261999Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164315658190802075Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:277
Count of miRNA genes:213
Interacting mature miRNAs:236
Transcripts:ENSMUST00000027863
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000027863   ⟹   ENSMUSP00000027863
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1164,264,678 - 164,285,924 (-)Ensembl
GRCm38.p6 Ensembl1164,437,109 - 164,458,355 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192522
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1164,280,831 - 164,285,591 (-)Ensembl
GRCm38.p6 Ensembl1164,453,262 - 164,458,022 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193367   ⟹   ENSMUSP00000141777
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1164,269,028 - 164,281,346 (-)Ensembl
GRCm38.p6 Ensembl1164,441,459 - 164,453,777 (-)Ensembl
RefSeq Acc Id: ENSMUST00000193980
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1164,269,028 - 164,271,288 (-)Ensembl
GRCm38.p6 Ensembl1164,441,459 - 164,443,719 (-)Ensembl
RefSeq Acc Id: NM_009721   ⟹   NP_033851
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391164,264,668 - 164,285,924 (-)NCBI
GRCm381164,437,099 - 164,458,355 (-)NCBI
MGSCv371166,367,398 - 166,388,486 (-)RGD
Celera1166,878,456 - 166,899,734 (-)NCBI
cM Map1 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033851   ⟸   NM_009721
- UniProtKB: P14094 (UniProtKB/Swiss-Prot),   Q3TV47 (UniProtKB/TrEMBL),   Q545P0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000027863   ⟸   ENSMUST00000027863
RefSeq Acc Id: ENSMUSP00000141777   ⟸   ENSMUST00000193367

Promoters
RGD ID:6875518
Promoter ID:EPDNEW_M1210
Type:initiation region
Name:Atp1b1_2
Description:Mus musculus ATPase, Na+/K+ transporting, beta 1 polypeptide, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1211  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381164,458,005 - 164,458,065EPDNEW
RGD ID:6875520
Promoter ID:EPDNEW_M1211
Type:multiple initiation site
Name:Atp1b1_1
Description:Mus musculus ATPase, Na+/K+ transporting, beta 1 polypeptide, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M1210  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381164,458,356 - 164,458,416EPDNEW
RGD ID:6846582
Promoter ID:MM_ACW:3028
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:ATP1B1.ESEP07,   ATP1B1.HSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361166,371,521 - 166,372,021 (-)MPROMDB
RGD ID:6846581
Promoter ID:MM_ACW:3031
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung
Transcripts:ATP1B1.DSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361166,383,504 - 166,384,004 (-)MPROMDB
RGD ID:6817393
Promoter ID:MM_KWN:2687
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   ES_Cell,   Lung,   MEF_B4
Transcripts:NM_009721
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361166,387,951 - 166,388,467 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88108 AgrOrtholog
Ensembl Genes ENSMUSG00000026576 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000027863 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000141777 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027863 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000193367 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.1660 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Na/K_ATPase_sub_beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na/K_ATPase_sub_beta_chordates UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na/K_ATPase_sub_beta_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11931 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88108 ENTREZGENE
NCBI Gene 11931 ENTREZGENE
PANTHER PTHR11523 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11523:SF10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Na_K-ATPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Atp1b1 PhenoGen
PROSITE ATPASE_NA_K_BETA_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ATPASE_NA_K_BETA_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs Na_K_ATPase_bet UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A6YX05_MOUSE UniProtKB/TrEMBL
  AT1B1_MOUSE UniProtKB/Swiss-Prot
  B0LAB6_MOUSE UniProtKB/TrEMBL
  P14094 ENTREZGENE
  Q3TRA6_MOUSE UniProtKB/TrEMBL
  Q3TSQ1_MOUSE UniProtKB/TrEMBL
  Q3TV47 ENTREZGENE, UniProtKB/TrEMBL
  Q545P0 ENTREZGENE, UniProtKB/TrEMBL