Kcnt2 (potassium channel, subfamily T, member 2) - Rat Genome Database

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Gene: Kcnt2 (potassium channel, subfamily T, member 2) Mus musculus
Analyze
Symbol: Kcnt2
Name: potassium channel, subfamily T, member 2
RGD ID: 1622042
MGI Page MGI
Description: Predicted to enable chloride-activated potassium channel activity; intracellular sodium activated potassium channel activity; and outward rectifier potassium channel activity. Predicted to be involved in potassium ion export across plasma membrane. Predicted to act upstream of or within potassium ion transport. Predicted to be active in plasma membrane. Predicted to be integral component of membrane. Is expressed in forebrain. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 57. Orthologous to human KCNT2 (potassium sodium-activated channel subfamily T member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: E330038N15Rik; potassium channel subfamily T member 2; Slick; sodium- and chloride-activated ATP-sensitive potassium channel subunit
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391140,173,373 - 140,541,783 (+)NCBIGRCm39mm39
GRCm39 Ensembl1140,173,896 - 140,539,805 (+)Ensembl
GRCm381140,245,657 - 140,614,045 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1140,246,158 - 140,612,067 (+)EnsemblGRCm38mm10GRCm38
MGSCv371142,142,834 - 142,506,838 (+)NCBIGRCm37mm9NCBIm37
MGSCv361142,062,668 - 142,426,672 (+)NCBImm8
Celera1142,875,113 - 143,237,483 (+)NCBICelera
Cytogenetic Map1FNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:14610273   PMID:16141072   PMID:16141073   PMID:17344399   PMID:17967808   PMID:18799693   PMID:21677750  
PMID:21862448   PMID:21873635   PMID:26559620   PMID:26587966   PMID:26845140   PMID:30796290   PMID:32796851  


Genomics

Comparative Map Data
Kcnt2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391140,173,373 - 140,541,783 (+)NCBIGRCm39mm39
GRCm39 Ensembl1140,173,896 - 140,539,805 (+)Ensembl
GRCm381140,245,657 - 140,614,045 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1140,246,158 - 140,612,067 (+)EnsemblGRCm38mm10GRCm38
MGSCv371142,142,834 - 142,506,838 (+)NCBIGRCm37mm9NCBIm37
MGSCv361142,062,668 - 142,426,672 (+)NCBImm8
Celera1142,875,113 - 143,237,483 (+)NCBICelera
Cytogenetic Map1FNCBI
KCNT2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381196,225,779 - 196,608,440 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1196,225,779 - 196,609,225 (-)EnsemblGRCh38hg38GRCh38
GRCh371196,194,909 - 196,577,570 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361194,461,536 - 194,844,122 (-)NCBINCBI36hg18NCBI36
Celera1169,303,964 - 169,686,483 (-)NCBI
Cytogenetic Map1q31.3NCBI
HuRef1167,436,578 - 167,819,452 (-)NCBIHuRef
CHM1_11197,616,644 - 197,999,107 (-)NCBICHM1_1
T2T-CHM13v2.01195,571,842 - 195,954,779 (-)NCBI
Kcnt2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21351,664,129 - 52,059,209 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1351,664,686 - 52,056,987 (+)Ensembl
Rnor_6.01357,130,855 - 57,520,263 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1357,131,395 - 57,521,836 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01362,143,990 - 62,534,723 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41353,407,504 - 53,803,012 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11353,421,583 - 53,817,092 (+)NCBI
Celera1351,920,143 - 52,310,493 (+)NCBICelera
Cytogenetic Map13q21NCBI
Kcnt2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540633,076,426 - 33,441,793 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540633,080,570 - 33,441,342 (-)NCBIChiLan1.0ChiLan1.0
KCNT2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11176,001,997 - 176,391,180 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1176,003,920 - 176,390,592 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01171,722,130 - 172,112,927 (-)NCBIMhudiblu_PPA_v0panPan3
KCNT2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1383,006,639 - 3,382,234 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl383,006,140 - 3,380,218 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha383,097,770 - 3,473,355 (+)NCBI
ROS_Cfam_1.0383,003,542 - 3,376,325 (+)NCBI
UMICH_Zoey_3.1382,999,648 - 3,374,824 (+)NCBI
UNSW_CanFamBas_1.0383,391,702 - 3,766,835 (+)NCBI
UU_Cfam_GSD_1.0383,591,639 - 3,964,394 (+)NCBI
Kcnt2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934477,990,611 - 78,357,811 (+)NCBI
SpeTri2.0NW_0049366383,789,339 - 4,154,356 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KCNT2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa10.21023,896,301 - 24,106,816 (-)NCBISscrofa10.2Sscrofa10.2susScr3
KCNT2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12532,790,439 - 33,193,936 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl2532,922,277 - 33,192,820 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605533,705,790 - 34,115,831 (+)NCBIVero_WHO_p1.0
Kcnt2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247983,578,706 - 3,867,854 (+)EnsemblHetGla_female_1.0hetGla2
HetGla 1.0NW_0046247983,579,528 - 3,868,717 (+)NCBIHetGla_female_1.0hetGla2

Position Markers
RH127138  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381140,458,258 - 140,458,458UniSTSGRCm38
MGSCv371142,354,835 - 142,355,035UniSTSGRCm37
Celera1143,089,142 - 143,089,342UniSTS
Cytogenetic Map1FUniSTS
D1Mit141  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381140,251,204 - 140,251,366UniSTSGRCm38
MGSCv371142,147,781 - 142,147,943UniSTSGRCm37
Celera1142,880,061 - 142,880,223UniSTS
Cytogenetic Map1FUniSTS
cM Map173.0UniSTS
Whitehead Genetic175.4UniSTS
UniSTS:224249  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381140,511,212 - 140,511,378UniSTSGRCm38
MGSCv371142,407,789 - 142,407,955UniSTSGRCm37
Celera1143,142,113 - 143,142,279UniSTS
Cytogenetic Map1FUniSTS


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134760138150193871Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134760138150193871Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134760138150193871Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163920002153557562Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173755175147125370Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74516235148715579Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)175976637148775742Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782291982147125370Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194127725148775742Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194127725172027567Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109495943143495943Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109638262143638479Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110553179144553298Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110553179144553298Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112008822168186402Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112131005146131085Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116290836150290937Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118099720152099816Mouse
27226740Metcl13_mmetatarsal-calcaneal length 13, 16 week (mouse)1121727729153775746Mouse
27226743Metcl7_mmetatarsal-calcaneal length 7, 10 week (mouse)1121727729153875746Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122027729164827569Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1122927738156927738Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129130858163130993Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131156308165139464Mouse
14746980Manh50_mmandible shape 50 (mouse)1134131564168131564Mouse
13504831Bacszq1_mbaculum size QTL 1 (mouse)1134331161148128608Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135794822169795012Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1135877901169878015Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136209950170210094Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:774
Count of miRNA genes:403
Interacting mature miRNAs:480
Transcripts:ENSMUST00000060201, ENSMUST00000119786, ENSMUST00000120709, ENSMUST00000120796, ENSMUST00000145077, ENSMUST00000154966
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001081027 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529562 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006529572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011247996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011247997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011247998 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011247999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017320512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030253999 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036164770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001784498 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942432 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC120400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC156989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000119786   ⟹   ENSMUSP00000113535
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,173,945 - 140,537,817 (+)Ensembl
GRCm38.p6 Ensembl1140,246,207 - 140,610,079 (+)Ensembl
RefSeq Acc Id: ENSMUST00000120709   ⟹   ENSMUSP00000112887
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,173,896 - 140,539,805 (+)Ensembl
GRCm38.p6 Ensembl1140,246,158 - 140,612,067 (+)Ensembl
RefSeq Acc Id: ENSMUST00000120796   ⟹   ENSMUSP00000113333
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,173,933 - 140,537,520 (+)Ensembl
GRCm38.p6 Ensembl1140,246,195 - 140,609,782 (+)Ensembl
RefSeq Acc Id: ENSMUST00000145077
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,370,839 - 140,450,956 (+)Ensembl
GRCm38.p6 Ensembl1140,443,101 - 140,523,218 (+)Ensembl
RefSeq Acc Id: ENSMUST00000192840
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,370,674 - 140,371,685 (+)Ensembl
GRCm38.p6 Ensembl1140,442,936 - 140,443,947 (+)Ensembl
RefSeq Acc Id: ENSMUST00000193606   ⟹   ENSMUSP00000141947
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,440,694 - 140,502,527 (+)Ensembl
GRCm38.p6 Ensembl1140,512,956 - 140,574,789 (+)Ensembl
RefSeq Acc Id: ENSMUST00000239229   ⟹   ENSMUSP00000159210
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1140,173,896 - 140,279,025 (+)Ensembl
GRCm38.p6 Ensembl1140,246,158 - 140,351,287 (+)Ensembl
RefSeq Acc Id: NM_001081027   ⟹   NP_001074496
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,456 - 140,541,783 (+)NCBI
GRCm381140,245,718 - 140,614,045 (+)NCBI
MGSCv371142,142,834 - 142,506,838 (+)RGD
Celera1142,875,113 - 143,237,483 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006529562   ⟹   XP_006529625
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,541,700 (+)NCBI
GRCm381140,245,681 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529565   ⟹   XP_006529628
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,416 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529566   ⟹   XP_006529629
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,418 - 140,541,700 (+)NCBI
GRCm381140,245,683 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529567   ⟹   XP_006529630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006529572   ⟹   XP_006529635
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,523,801 (+)NCBI
GRCm381140,245,681 - 140,596,063 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011247996   ⟹   XP_011246298
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,417 - 140,541,700 (+)NCBI
GRCm381140,245,683 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011247997   ⟹   XP_011246299
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,541,700 (+)NCBI
GRCm381140,245,681 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011247998   ⟹   XP_011246300
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,417 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011247999   ⟹   XP_011246301
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,374 - 140,461,692 (+)NCBI
GRCm381140,245,657 - 140,533,954 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320506   ⟹   XP_017175995
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,541,700 (+)NCBI
GRCm381140,245,681 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320507   ⟹   XP_017175996
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,416 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320508   ⟹   XP_017175997
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,415 - 140,541,700 (+)NCBI
GRCm381140,245,681 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320509   ⟹   XP_017175998
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,416 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320510   ⟹   XP_017175999
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,409 - 140,541,700 (+)NCBI
GRCm381140,245,680 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017320512   ⟹   XP_017176001
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,359,155 - 140,541,700 (+)NCBI
GRCm381140,431,415 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030253999   ⟹   XP_030109859
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,417 - 140,541,700 (+)NCBI
GRCm381140,245,682 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036164770   ⟹   XP_036020663
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,877 - 140,541,700 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784491
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,385 - 140,511,826 (+)NCBI
GRCm381140,245,668 - 140,584,088 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784492
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,385 - 140,511,839 (+)NCBI
GRCm381140,245,668 - 140,584,101 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784494
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,381 - 140,541,700 (+)NCBI
GRCm381140,245,660 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001784498
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,381 - 140,537,456 (+)NCBI
GRCm381140,245,660 - 140,613,962 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942432
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391140,173,373 - 140,537,456 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001074496   ⟸   NM_001081027
- UniProtKB: D3Z649 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006529625   ⟸   XM_006529562
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006529635   ⟸   XM_006529572
- Peptide Label: isoform X17
- Sequence:
RefSeq Acc Id: XP_006529630   ⟸   XM_006529567
- Peptide Label: isoform X12
- Sequence:
RefSeq Acc Id: XP_006529628   ⟸   XM_006529565
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_006529629   ⟸   XM_006529566
- Peptide Label: isoform X11
- UniProtKB: D3YTU6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011246301   ⟸   XM_011247999
- Peptide Label: isoform X14
- Sequence:
RefSeq Acc Id: XP_011246299   ⟸   XM_011247997
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_011246298   ⟸   XM_011247996
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_011246300   ⟸   XM_011247998
- Peptide Label: isoform X13
- UniProtKB: D3Z592 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017175999   ⟸   XM_017320510
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: XP_017175995   ⟸   XM_017320506
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017175997   ⟸   XM_017320508
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_017175996   ⟸   XM_017320507
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_017175998   ⟸   XM_017320509
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_017176001   ⟸   XM_017320512
- Peptide Label: isoform X15
- Sequence:
RefSeq Acc Id: XP_030109859   ⟸   XM_030253999
- Peptide Label: isoform X4
RefSeq Acc Id: ENSMUSP00000113535   ⟸   ENSMUST00000119786
RefSeq Acc Id: ENSMUSP00000159210   ⟸   ENSMUST00000239229
RefSeq Acc Id: ENSMUSP00000113333   ⟸   ENSMUST00000120796
RefSeq Acc Id: ENSMUSP00000112887   ⟸   ENSMUST00000120709
RefSeq Acc Id: ENSMUSP00000141947   ⟸   ENSMUST00000193606
RefSeq Acc Id: XP_036020663   ⟸   XM_036164770
- Peptide Label: isoform X16
Protein Domains
BK_channel_a   Ion_trans_2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3Z649-F1-model_v2 AlphaFold D3Z649 1-1135 view protein structure

Promoters
RGD ID:6817969
Promoter ID:MM_KWN:2323
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000086355,   ENSMUST00000119786,   ENSMUST00000120709,   ENSMUST00000120796,   OTTMUST00000074033,   OTTMUST00000074240
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361142,142,071 - 142,142,571 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3036273 AgrOrtholog
Ensembl Genes ENSMUSG00000052726 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000112887 ENTREZGENE
  ENSMUSP00000112887.2 UniProtKB/TrEMBL
  ENSMUSP00000113333 ENTREZGENE
  ENSMUSP00000113333.2 UniProtKB/TrEMBL
  ENSMUSP00000113535 ENTREZGENE
  ENSMUSP00000113535.2 UniProtKB/TrEMBL
  ENSMUSP00000141947.2 UniProtKB/TrEMBL
  ENSMUSP00000159210.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000119786 ENTREZGENE
  ENSMUST00000119786.8 UniProtKB/TrEMBL
  ENSMUST00000120709 ENTREZGENE
  ENSMUST00000120709.8 UniProtKB/TrEMBL
  ENSMUST00000120796 ENTREZGENE
  ENSMUST00000120796.8 UniProtKB/TrEMBL
  ENSMUST00000193606.2 UniProtKB/TrEMBL
  ENSMUST00000239229.2 UniProtKB/TrEMBL
InterPro Ion_trans_2 UniProtKB/TrEMBL
  K_chnl_Ca-activ_BK_asu UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/TrEMBL
KEGG Report mmu:240776 UniProtKB/TrEMBL
MGD MGI:3036273 ENTREZGENE
NCBI Gene 240776 ENTREZGENE
Pfam BK_channel_a UniProtKB/TrEMBL
  Ion_trans_2 UniProtKB/TrEMBL
PhenoGen Kcnt2 PhenoGen
Superfamily-SCOP SSF51735 UniProtKB/TrEMBL
UniProt A0A0A6YXD8_MOUSE UniProtKB/TrEMBL
  A0A668KLS9_MOUSE UniProtKB/TrEMBL
  D3YTU6 ENTREZGENE, UniProtKB/TrEMBL
  D3Z592 ENTREZGENE, UniProtKB/TrEMBL
  D3Z649 ENTREZGENE, UniProtKB/TrEMBL
  Q8BHX7_MOUSE UniProtKB/TrEMBL
UniProt Secondary F6VNZ6 UniProtKB/TrEMBL