Cfap45 (cilia and flagella associated protein 45) - Rat Genome Database

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Pathways
Gene: Cfap45 (cilia and flagella associated protein 45) Mus musculus
Analyze
Symbol: Cfap45
Name: cilia and flagella associated protein 45
RGD ID: 1621500
MGI Page MGI
Description: Predicted to enable AMP binding activity. Involved in flagellated sperm motility. Acts upstream of or within cerebrospinal fluid circulation; epithelial cilium movement involved in determination of left/right asymmetry; and regulation of cilium beat frequency involved in ciliary motility. Located in 9+0 motile cilium. Is active in axonemal B tubule inner sheath and sperm flagellum. Is expressed in lateral ventricle choroid plexus; lung; metencephalon part of 4th ventricle choroid plexus; and olfactory epithelium. Human ortholog(s) of this gene implicated in visceral heterotaxy 11. Orthologous to human CFAP45 (cilia and flagella associated protein 45).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1700028D05Rik; Ccdc19; cilia- and flagella-associated protein 45; coiled-coil domain containing 19; coiled-coil domain-containing protein 19; nasopharyngeal epithelium specific protein 1; Nes; Nesg1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,348,697 - 172,373,437 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,348,368 - 172,373,437 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381172,521,130 - 172,545,870 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,520,801 - 172,545,870 (+)Ensemblmm10GRCm38
MGSCv371174,451,261 - 174,476,001 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361174,357,811 - 174,382,544 (+)NCBIMGSCv36mm8
Celera1175,374,886 - 175,400,082 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.91NCBI
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11401431   PMID:12466851   PMID:12477932   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21677750   PMID:27914912  
PMID:33139725   PMID:37196079   PMID:37236356   PMID:37295417   PMID:37865089   PMID:37989994   PMID:38355793  


Genomics

Comparative Map Data
Cfap45
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391172,348,697 - 172,373,437 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1172,348,368 - 172,373,437 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm381172,521,130 - 172,545,870 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1172,520,801 - 172,545,870 (+)Ensemblmm10GRCm38
MGSCv371174,451,261 - 174,476,001 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv361174,357,811 - 174,382,544 (+)NCBIMGSCv36mm8
Celera1175,374,886 - 175,400,082 (+)NCBICelera
Cytogenetic Map1H3NCBI
cM Map179.91NCBI
CFAP45
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381159,872,364 - 159,900,165 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1159,872,364 - 159,900,165 (-)Ensemblhg38GRCh38
GRCh371159,842,154 - 159,869,955 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361158,108,778 - 158,136,530 (-)NCBIBuild 36Build 36hg18NCBI36
Celera1132,910,587 - 132,938,343 (-)NCBICelera
Cytogenetic Map1q23.2NCBI
HuRef1131,198,847 - 131,226,612 (-)NCBIHuRef
CHM1_11161,237,490 - 161,265,234 (-)NCBICHM1_1
T2T-CHM13v2.01159,009,376 - 159,037,231 (-)NCBIT2T-CHM13v2.0
Cfap45
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81387,521,831 - 87,545,236 (+)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1387,521,518 - 87,545,234 (+)EnsemblGRCr8
mRatBN7.21384,989,474 - 85,012,880 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1384,981,728 - 85,012,878 (+)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1387,492,710 - 87,516,101 (+)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01388,892,981 - 88,916,374 (+)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01386,077,721 - 86,101,112 (+)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01390,909,551 - 90,932,958 (+)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1390,909,486 - 90,932,961 (+)Ensemblrn6Rnor6.0
Rnor_5.01395,428,824 - 95,452,275 (+)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41388,527,708 - 88,551,091 (+)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1384,598,511 - 84,621,911 (+)NCBICelera
Cytogenetic Map13q24NCBI
Cfap45
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546811,672,462 - 11,699,245 (-)Ensembl
ChiLan1.0NW_00495546811,672,332 - 11,711,395 (-)NCBIChiLan1.0ChiLan1.0
CFAP45
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2189,954,134 - 89,982,186 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1189,694,157 - 89,722,160 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01135,223,885 - 135,251,829 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11139,144,630 - 139,172,558 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1139,144,634 - 139,172,558 (-)EnsemblpanPan2panpan1.1
CFAP45
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13822,245,879 - 22,269,363 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3822,254,472 - 22,269,322 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha3822,323,607 - 22,347,206 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.03822,368,843 - 22,392,770 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3822,368,757 - 22,392,729 (+)EnsemblROS_Cfam_1.0 Ensembl
UNSW_CanFamBas_1.03822,668,511 - 22,692,064 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03823,079,342 - 23,103,004 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Cfap45
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244050586,015,680 - 6,044,107 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936740710,076 - 738,701 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_004936740710,076 - 738,766 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CFAP45
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl490,593,858 - 90,627,800 (+)EnsemblsusScr11Sscrofa11.1
Sscrofa11.1490,593,864 - 90,626,660 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2498,569,705 - 98,596,559 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CFAP45
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1204,036,029 - 4,078,608 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl204,050,311 - 4,078,587 (+)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_0236660383,107,682 - 3,136,838 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Cfap45
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247941,352,445 - 1,379,961 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_0046247941,344,107 - 1,380,069 (+)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Cfap45
1378 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1572
Count of miRNA genes:450
Interacting mature miRNAs:547
Transcripts:ENSMUST00000085894, ENSMUST00000159395, ENSMUST00000159792, ENSMUST00000160303, ENSMUST00000160531, ENSMUST00000161140, ENSMUST00000162988
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
1558802Skmw6_mskeletal muscle weight 6 (mouse)Not determined1167954584195154279Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
4141878Qrr1_mQTL rich region on chromosome 1 (mouse)Not determined170878743175320066Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
1357854Sle16_msystematic lupus erythematosus susceptibility 16 (mouse)Not determined1169038741177377587Mouse
4142389Scfr1_mstem cell frequency regulator 1 (mouse)Not determined171632048189303617Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
1301016Szs1_mseizure susceptibility 1 (mouse)Not determined1170878743174456436Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160097157194097157Mouse
1301251Scc3_mcolon tumor susceptibility 3 (mouse)Not determined1168213823195154279Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157456299191456436Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1103933405191225397Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150756737184756922Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150193673188359312Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152038741186038913Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155002940189002940Mouse
1301565Mnotch_mmodifier of Notch (mouse)Not determined1157456299191456436Mouse
1301309Emo1_memotionality 1 (mouse)Not determined1162977097185994196Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152038741186038913Mouse
10412205Bbaa30_mB.burgdorferi-associated arthritis 30 (mouse)Not determined1169038741174456436Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155002940189002940Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139602037173602216Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155002940189002940Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9147875502181875616Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112008822175468938Mouse
1300823Ath9_matherosclerosis 9 (mouse)Not determined1160112768194112883Mouse
1301333Mop3_mmorphine preference 3 (mouse)Not determined1167756737189303617Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144531347178531592Mouse
1301339Hdlq15_mHDL QTL 15 (mouse)Not determined1165873675195154279Mouse
10043863Swrl5_mSWR lupus locus 5 (mouse)Not determined1172303451195154279Mouse
1301596Elnt_mescape latencies during navigation task (mouse)Not determined1162145207194111528Mouse
4141165Bglu3_mblood glucose level 3 (mouse)Not determined155831765189831892Mouse
12792983Liq1_mlimb inflammation QTL 1 (mouse)1167586086191225397Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152038741186038913Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139452188173452308Mouse
4142182Shali5_msurvival time to hyperoxic acute lung injury 5 (mouse)Not determined155582237185994196Mouse
10402498Lmr20_mleishmaniasis resistance 20 (mouse)Not determined1158468817192468938Mouse
1301619Cafq1_mcaffeine metabolism QTL 1 (mouse)Not determined1155716221189716369Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147125258188983224Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1147875502181875616Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144449142178449142Mouse
11081167Tir8_mtrypanosome infection response 8 (mouse)1155716221189716369Mouse
1302132Pbw1_mpentobarbital withdrawal QTL 1 (mouse)Not determined1155831765189831892Mouse
4142417Emrq1_memotional reactivity QTL 1 (mouse)Not determined171632048172716369Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined151835111185835280Mouse
1301602Bslm4_mbasal locomotor activity 4 (mouse)Not determined1157456299191456436Mouse
1301866Cplaq3_mcircadian period of locomotor activity 3 (mouse)Not determined1155721528189722608Mouse
1300842Sle9_msystematic lupus erythematosus susceptibility 9 (mouse)Not determined1158468817192468938Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153557406175468938Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152038741186038913Mouse
12910521Scgq1_mspontaneous crescentic glomerulonephritis QTL 1 (mouse)1156602037176262693Mouse
11039528Ccc3_mcolitis susceptibility in the Collaborative Cross 3 (mouse)13680142195051546Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141095010175095156Mouse
4141245Cq2_mcholesterol QTL 2 (mouse)Not determined1157456299191456436Mouse
4141244Bmd5c_mbone mineral density 5c (mouse)Not determined155526796189526897Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152132744186132744Mouse
1301652Cpfd2_mcerebellum pattern fissures (mouse)Not determined1172303451195154279Mouse
38456000Lick2_mlick rate 2, sucralose (mouse)1170397438173397435Mouse
1300888Berr1_mberghei resistance locus 1 (mouse)Not determined1164143227190534272Mouse
38456001Lick1_mlick rate 1, water (mouse)1170397438173397435Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142489543176489734Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141233173175233272Mouse
1301122Cd8mts1_mCD8 T memory cell subset 1 (mouse)Not determined1155831765189831892Mouse
1301632Bw8q1_mbody weight at 8 weeks QTL 1 (mouse)Not determined1161201261195154279Mouse
4141483Femwf7_mfemur work to failure 7 (mouse)Not determined167462514195154279Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139602037173602216Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147125258182873798Mouse
1301134Bmd1_mbone mineral density 1 (mouse)Not determined1156602037189303617Mouse
1302158Fembrs5_mfemur breaking strength 5 (mouse)Not determined1167462514195154279Mouse
1301132Mors1_mmodifier of obesity related sterility 1 (mouse)Not determined1170379500195154279Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150193673188359312Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152132744186132744Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139602037173602216Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154410512188410512Mouse
1301431Pcho1_mplasma cholesterol 1 (mouse)Not determined1159262573193262693Mouse
1357732Tbbmd1_mtotal body bone mineral density 1 (mouse)Not determined1171983110195154279Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153675990187676105Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150193673188359312Mouse
1301932Ssta2_msusceptibility to Salmonella typhimurium antigens 2 (mouse)Not determined1155716221189716369Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139602037173602216Mouse
1301202Yaa4_mY-linked autoimmune acceleration 4 (mouse)Not determined1158468817192468938Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153712853187712853Mouse
1300948Fglu2_mfasting glucose 2 (mouse)Not determined1157456299191456436Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141233173175233272Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145783900189303617Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139602037173602216Mouse
11059556Lmr20b_mleishmaniasis resistance 20b (mouse)1158468817192468938Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152038741186038913Mouse
11059557Lmr20a_mleishmaniasis resistance 20a (mouse)1158468817192468938Mouse
11059558Lmr20c_mleishmaniasis resistance 20c (mouse)1158468817192468938Mouse
11049575Lmr8b_mleishmaniasis resistance 8b (mouse)1172303451195154279Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141233173175233272Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145145207179145325Mouse
1301189Lmr8_mleishmaniasis resistance 8 (mouse)Not determined1156602037189303617Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143284665177284803Mouse
13207571Tcq11_mtotal cholesterol QTL 11 (mouse)1169137569179647565Mouse
10766456Sle21_msystematic lupus erythematosus susceptibility 21 (mouse)1155831765189831892Mouse
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139602037173602216Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128727737181327565Mouse
1300727Mptp1_mMPTP sensitivity 1 (mouse)Not determined1171632048192681050Mouse
10054271Nba9_mNew Zealand Black autoimmunity 9 (mouse)Not determined1155525623189527533Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152794822186438620Mouse
1559024Zit1_mzinc induced tolerance 1 (mouse)Not determined1167462514195154279Mouse
13207587Mwmlpt1_mMorris water maze latency to platform, training, 1 (mouse)1169597438173397435Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52457737182250592Mouse
13207591Mwmlpa1_mMorris water maze latency to platform, all, 1 (mouse)1169797438173297435Mouse
1300732Melm2_mmelanoma modifier 2 (mouse)Not determined1157456299191456436Mouse
1301216Cbm1_mcerebellum weight 1 (mouse)Not determined1157456299191456436Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117527730179827565Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141233173175233272Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)175976637181327565Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151186243185186402Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000085894   ⟹   ENSMUSP00000083057
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,348,611 - 172,373,437 (+)Ensembl
GRCm38.p6 Ensembl1172,521,044 - 172,545,870 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159395   ⟹   ENSMUSP00000125224
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,353,977 - 172,360,252 (+)Ensembl
GRCm38.p6 Ensembl1172,526,410 - 172,532,685 (+)Ensembl
Ensembl Acc Id: ENSMUST00000159792   ⟹   ENSMUSP00000124540
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,353,616 - 172,360,252 (+)Ensembl
GRCm38.p6 Ensembl1172,526,049 - 172,532,685 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160303   ⟹   ENSMUSP00000124646
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,365,184 - 172,368,133 (+)Ensembl
GRCm38.p6 Ensembl1172,537,617 - 172,540,566 (+)Ensembl
Ensembl Acc Id: ENSMUST00000160531
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,348,703 - 172,360,298 (+)Ensembl
GRCm38.p6 Ensembl1172,521,136 - 172,532,731 (+)Ensembl
Ensembl Acc Id: ENSMUST00000161140   ⟹   ENSMUSP00000125225
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,348,706 - 172,360,192 (+)Ensembl
GRCm38.p6 Ensembl1172,521,139 - 172,532,625 (+)Ensembl
Ensembl Acc Id: ENSMUST00000162988   ⟹   ENSMUSP00000124654
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,348,748 - 172,360,169 (+)Ensembl
GRCm38.p6 Ensembl1172,521,181 - 172,532,602 (+)Ensembl
Ensembl Acc Id: ENSMUST00000194051
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1172,348,368 - 172,351,793 (+)Ensembl
GRCm38.p6 Ensembl1172,520,801 - 172,524,226 (+)Ensembl
RefSeq Acc Id: NM_027972   ⟹   NP_082248
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,348,697 - 172,373,437 (+)NCBI
GRCm381172,521,130 - 172,545,870 (+)ENTREZGENE
MGSCv371174,451,261 - 174,476,001 (+)RGD
Celera1175,374,886 - 175,400,082 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_036153691   ⟹   XP_036009584
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391172,353,367 - 172,373,436 (+)NCBI
Sequence:
RefSeq Acc Id: NP_082248   ⟸   NM_027972
- UniProtKB: Q9D9U9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000125224   ⟸   ENSMUST00000159395
Ensembl Acc Id: ENSMUSP00000124540   ⟸   ENSMUST00000159792
Ensembl Acc Id: ENSMUSP00000083057   ⟸   ENSMUST00000085894
Ensembl Acc Id: ENSMUSP00000124646   ⟸   ENSMUST00000160303
Ensembl Acc Id: ENSMUSP00000124654   ⟸   ENSMUST00000162988
Ensembl Acc Id: ENSMUSP00000125225   ⟸   ENSMUST00000161140
RefSeq Acc Id: XP_036009584   ⟸   XM_036153691
- Peptide Label: isoform X1
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9D9U9-F1-model_v2 AlphaFold Q9D9U9 1-551 view protein structure

Promoters
RGD ID:6875770
Promoter ID:EPDNEW_M1336
Type:multiple initiation site
Name:Cfap45_1
Description:Mus musculus cilia and flagella associated protein 45 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381172,521,130 - 172,521,190EPDNEW
RGD ID:6817476
Promoter ID:MM_KWN:2927
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Lung
Transcripts:NM_027972
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361174,450,881 - 174,451,381 (+)MPROMDB
RGD ID:6817475
Promoter ID:MM_KWN:2928
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:ENSMUST00000111226
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361174,456,826 - 174,457,326 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1919120 AgrOrtholog
Ensembl Genes ENSMUSG00000026546 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000085894 ENTREZGENE
  ENSMUST00000085894.12 UniProtKB/Swiss-Prot
InterPro CFAP45 UniProtKB/Swiss-Prot
  TPH_dom UniProtKB/Swiss-Prot
KEGG Report mmu:71870 UniProtKB/Swiss-Prot
MGD MGI:1919120 ENTREZGENE
NCBI Gene 71870 ENTREZGENE
PANTHER CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 45 UniProtKB/Swiss-Prot
  PTHR15504 UniProtKB/Swiss-Prot
Pfam TPH UniProtKB/Swiss-Prot
PhenoGen Cfap45 PhenoGen
UniProt CFA45_MOUSE UniProtKB/Swiss-Prot
  E0CXK5_MOUSE UniProtKB/TrEMBL
  E0CXK6_MOUSE UniProtKB/TrEMBL
  E0CXX0_MOUSE UniProtKB/TrEMBL
  E0CXX5_MOUSE UniProtKB/TrEMBL
  Q9D9U9 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-09-10 Cfap45  cilia and flagella associated protein 45  Ccdc19  coiled-coil domain containing 19  Symbol and/or name change 5135510 APPROVED