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Gene: Odr4 (odr4 GPCR localization factor homolog) Mus musculus

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Symbol:

Odr4

Name:

odr4 GPCR localization factor homolog

RGD ID:

1317254

MGI Page

MGI

Description:

Predicted to be involved in protein localization. Predicted to be located in membrane. Is expressed in several structures, including choroid invagination; craniocervical region bone; embryo mesenchyme; meninges; and sensory organ. Orthologous to human ODR4 (odr-4 GPCR localization factor homolog).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

1810053E15Rik; BC003331; cDNA sequence BC003331; MGC7150; mODR-4; odr-4; olfactory specific odr-4; protein odr-4 homolog; RIKEN cDNA 1810053E15 gene

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ODR4 (odr-4 GPCR localization factor homolog)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Odr4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Odr4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	ODR4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ODR4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Odr4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ODR4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	ODR4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Odr4 (odr-4 GPCR localization factor homolog)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Odr4 (odr-4 GPCR localization factor homolog)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	ODR4 (odr-4 GPCR localization factor homolog)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Drosophila melanogaster (fruit fly):	CG10616	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|PANTHER\|PhylomeDB)
Caenorhabditis elegans (roundworm):	odr-4	Alliance	DIOPT (Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB)
Danio rerio (zebrafish):	odr4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Xenopus tropicalis (tropical clawed frog):	odr4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Related Pseudogenes:

Ps-modr4

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	150,237,056 - 150,268,831 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	150,237,056 - 150,268,831 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	150,361,305 - 150,393,080 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	150,361,305 - 150,393,080 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	152,208,441 - 152,240,185 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	152,124,739 - 152,152,574 (-)	NCBI		MGSCv36	mm8
Celera	1	152,800,497 - 152,832,235 (-)	NCBI		Celera
Cytogenetic Map	1	G1	NCBI
cM Map	1	63.84	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Odr4	Mouse	gastrointestinal stromal tumor		ISO	RGD:1346906	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
Odr4	Mouse	parathyroid carcinoma		ISO	RGD:1346906	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Odr4	Mouse	(-)-epigallocatechin 3-gallate	increases expression	ISO	RGD:1346906	6480464	epigallocatechin gallate results in increased expression of ODR4 protein	CTD	PMID:31195006
Odr4	Mouse	(1->4)-beta-D-glucan	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ODR4 mRNA	CTD	PMID:36331819
Odr4	Mouse	17beta-estradiol	multiple interactions	ISO	RGD:1307830	6480464	[bisphenol A co-treated with Estradiol] results in decreased expression of ODR4 mRNA	CTD	PMID:26496021
Odr4	Mouse	2,3,7,8-tetrachlorodibenzodioxine	increases expression	ISO	RGD:1307830	6480464	Tetrachlorodibenzodioxin results in increased expression of ODR4 mRNA	CTD	PMID:32109520\|PMID:33387578
Odr4	Mouse	acrolein	multiple interactions	ISO	RGD:1346906	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Odr4	Mouse	alpha-pinene	multiple interactions	ISO	RGD:1346906	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Odr4	Mouse	benzo[a]pyrene	increases expression	ISO	RGD:1346906	6480464	Benzo(a)pyrene results in increased expression of ODR4 mRNA	CTD	PMID:26238291
Odr4	Mouse	benzo[a]pyrene diol epoxide I	decreases expression	ISO	RGD:1346906	6480464	7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide results in decreased expression of ODR4 mRNA	CTD	PMID:20018196
Odr4	Mouse	bisphenol A	multiple interactions	ISO	RGD:1307830	6480464	[bisphenol A co-treated with Estradiol] results in decreased expression of ODR4 mRNA	CTD	PMID:26496021
Odr4	Mouse	bisphenol A	decreases expression	ISO	RGD:1307830	6480464	bisphenol A results in decreased expression of ODR4 mRNA	CTD	PMID:25181051\|PMID:30816183
Odr4	Mouse	cadmium dichloride	decreases expression	ISO	RGD:1346906	6480464	Cadmium Chloride results in decreased expression of ODR4 mRNA	CTD	PMID:38568856
Odr4	Mouse	chlorpyrifos	decreases expression	EXP		6480464	Chlorpyrifos results in decreased expression of ODR4 mRNA	CTD	PMID:37019170
Odr4	Mouse	cisplatin	multiple interactions	ISO	RGD:1346906	6480464	[Cisplatin co-treated with jinfukang] results in decreased expression of ODR4 mRNA	CTD	PMID:27392435
Odr4	Mouse	cisplatin	decreases expression	ISO	RGD:1346906	6480464	Cisplatin results in decreased expression of ODR4 mRNA	CTD	PMID:27392435
Odr4	Mouse	Cuprizon	decreases expression	ISO	RGD:1307830	6480464	Cuprizone results in decreased expression of ODR4 mRNA	CTD	PMID:27523638
Odr4	Mouse	cyclosporin A	increases expression	ISO	RGD:1346906	6480464	Cyclosporine results in increased expression of ODR4 mRNA	CTD	PMID:21632981\|PMID:25562108\|PMID:27989131
Odr4	Mouse	Dibutyl phosphate	affects expression	ISO	RGD:1346906	6480464	di-n-butylphosphoric acid affects the expression of ODR4 mRNA	CTD	PMID:37042841
Odr4	Mouse	dicrotophos	decreases expression	ISO	RGD:1346906	6480464	dicrotophos results in decreased expression of ODR4 mRNA	CTD	PMID:28302478
Odr4	Mouse	fenvalerate	increases expression	ISO	RGD:1307830	6480464	fenvalerate results in increased expression of ODR4 mRNA	CTD	PMID:30307764
Odr4	Mouse	gallic acid	decreases expression	ISO	RGD:1346906	6480464	Gallic Acid results in decreased expression of ODR4 mRNA	CTD	PMID:34408198
Odr4	Mouse	gold atom	decreases expression	ISO	RGD:1346906	6480464	Gold results in decreased expression of ODR4 mRNA	CTD	PMID:25523186
Odr4	Mouse	gold(0)	decreases expression	ISO	RGD:1346906	6480464	Gold results in decreased expression of ODR4 mRNA	CTD	PMID:25523186
Odr4	Mouse	inulin	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Inulin] results in increased expression of ODR4 mRNA	CTD	PMID:36331819
Odr4	Mouse	isotretinoin	decreases expression	ISO	RGD:1346906	6480464	Isotretinoin results in decreased expression of ODR4 mRNA	CTD	PMID:20436886
Odr4	Mouse	ivermectin	increases expression	ISO	RGD:1346906	6480464	Ivermectin results in increased expression of ODR4 protein	CTD	PMID:32959892
Odr4	Mouse	leflunomide	increases expression	ISO	RGD:1346906	6480464	leflunomide results in increased expression of ODR4 mRNA	CTD	PMID:28988120
Odr4	Mouse	methyl methanesulfonate	increases expression	ISO	RGD:1346906	6480464	Methyl Methanesulfonate results in increased expression of ODR4 mRNA	CTD	PMID:23649840
Odr4	Mouse	ozone	multiple interactions	ISO	RGD:1346906	6480464	[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of more ...	CTD	PMID:32699268
Odr4	Mouse	paracetamol	decreases expression	ISO	RGD:1307830	6480464	Acetaminophen results in decreased expression of ODR4 mRNA	CTD	PMID:33387578
Odr4	Mouse	perfluorooctane-1-sulfonic acid	decreases expression	ISO	RGD:1346906	6480464	perfluorooctane sulfonic acid results in decreased expression of ODR4 mRNA	CTD	PMID:27153767
Odr4	Mouse	perfluorooctane-1-sulfonic acid	multiple interactions	EXP		6480464	[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of ODR4 mRNA; [perfluorooctane sulfonic more ...	CTD	PMID:36331819
Odr4	Mouse	resveratrol	multiple interactions	ISO	RGD:1346906	6480464	[Plant Extracts co-treated with Resveratrol] results in increased expression of ODR4 mRNA	CTD	PMID:23557933
Odr4	Mouse	sodium arsenite	increases expression	ISO	RGD:1346906	6480464	sodium arsenite results in increased expression of ODR4 mRNA	CTD	PMID:38568856
Odr4	Mouse	thiram	increases expression	ISO	RGD:1346906	6480464	Thiram results in increased expression of ODR4 mRNA	CTD	PMID:38568856
Odr4	Mouse	triptonide	increases expression	EXP		6480464	triptonide results in increased expression of ODR4 mRNA	CTD	PMID:33045310
Odr4	Mouse	valproic acid	decreases methylation	ISO	RGD:1346906	6480464	Valproic Acid results in decreased methylation of ODR4 gene	CTD	PMID:29154799

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Odr4	Mouse	protein localization	involved_in	IBA	PANTHER:PTN002143669\|WB:WBGene00003851	2290270		GO_Central	GO_REF:0000033

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Odr4	Mouse	cellular_component	is_active_in	ND		2290270		MGI	GO_REF:0000015
Odr4	Mouse	membrane	located_in	IEA	UniProtKB-SubCell:SL-0162	2290270		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Odr4	Mouse	molecular_function	enables	ND		2290270		MGI	GO_REF:0000015

#	Reference Title	Reference Citation
1.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions

PMID:8889548	PMID:10349636	PMID:10922068	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:14610273	PMID:16141072	PMID:16141073	PMID:17967808
PMID:18554416	PMID:18799693	PMID:21267068	PMID:21677750	PMID:21873635	PMID:30550785

Odr4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	150,237,056 - 150,268,831 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	150,237,056 - 150,268,831 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	150,361,305 - 150,393,080 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	150,361,305 - 150,393,080 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	152,208,441 - 152,240,185 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	152,124,739 - 152,152,574 (-)	NCBI		MGSCv36	mm8
Celera	1	152,800,497 - 152,832,235 (-)	NCBI		Celera
Cytogenetic Map	1	G1	NCBI
cM Map	1	63.84	NCBI

ODR4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	186,375,838 - 186,435,031 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	186,375,838 - 186,421,378 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	186,344,970 - 186,390,507 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	184,611,624 - 184,657,126 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	1	183,076,657 - 183,122,159	NCBI
Celera	1	159,455,598 - 159,501,227 (+)	NCBI		Celera
Cytogenetic Map	1	q31.1	NCBI
HuRef	1	157,579,409 - 157,625,044 (+)	NCBI		HuRef
CHM1_1	1	187,766,629 - 187,812,246 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	185,730,569 - 185,776,136 (+)	NCBI		T2T-CHM13v2.0

Odr4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	64,925,573 - 64,974,395 (-)	NCBI		GRCr8
mRatBN7.2	13	62,369,109 - 62,424,287 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	62,394,608 - 62,424,209 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	13	67,578,904 - 67,611,605 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	67,583,621 - 67,609,469 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	72,543,336 - 72,576,416 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	64,660,070 - 64,686,348 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	13	64,674,635 - 64,700,445 (-)	NCBI
Celera	13	62,352,573 - 62,384,680 (-)	NCBI		Celera
Cytogenetic Map	13	q21	NCBI

Odr4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	24,812,094 - 24,839,524 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	24,806,462 - 24,837,703 (+)	NCBI	ChiLan1.0	ChiLan1.0

ODR4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	63,170,428 - 63,343,628 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	62,872,543 - 63,024,993 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	161,903,661 - 162,054,747 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	166,055,303 - 166,098,209 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	166,059,265 - 166,098,209 (+)	Ensembl	panpan1.1		panPan2

ODR4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	7	19,442,748 - 19,483,823 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	7	19,443,071 - 19,482,121 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	7	18,964,369 - 19,005,440 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	7	19,178,829 - 19,219,905 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	7	19,179,152 - 19,219,884 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	7	19,085,592 - 19,126,821 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	7	19,194,837 - 19,236,064 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	7	19,325,701 - 19,366,996 (+)	NCBI		UU_Cfam_GSD_1.0

Odr4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	86,070,339 - 86,203,879 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936481	4,001,318 - 4,050,642 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ODR4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	9	127,540,531 - 127,619,134 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	9	127,540,448 - 127,742,976 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	9	139,992,556 - 140,033,094 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ODR4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	43,014,124 - 43,056,521 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	43,021,363 - 43,056,547 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	44,203,308 - 44,245,715 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Odr4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624814	7,221,089 - 7,248,959 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in Odr4
1922 total Variants

Predicted Target Of

	Summary Value
Count of predictions:	1842
Count of miRNA genes:	469
Interacting mature miRNAs:	562
Transcripts:	ENSMUST00000006167, ENSMUST00000094477, ENSMUST00000097546, ENSMUST00000097547, ENSMUST00000111913, ENSMUST00000132809, ENSMUST00000140112, ENSMUST00000148389, ENSMUST00000150615
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
11039528	Ccc3_m	colitis susceptibility in the Collaborative Cross 3 (mouse)					1	3680142	195051546	Mouse
1301523	Ccrs1_m	corpus callosum hemisphere surface size 1 (mouse)			Not determined		1	139602037	173602216	Mouse
4142014	Wbcq5_m	white blood cell quantitative locus 5 (mouse)			Not determined		1	141095010	175095156	Mouse
1302161	Exq2_m	exploratory and excitability QTL 2 (mouse)			Not determined		1	118099720	152099816	Mouse
27226779	Tibl1_m	tibia length 1, 5 week (mouse)					1	95527725	162027569	Mouse
14746980	Manh50_m	mandible shape 50 (mouse)					1	134131564	168131564	Mouse
10412185	Hcs9_m	hepatocarcinogenesis susceptibility 9 (mouse)			Not determined		1	63854690	189303617	Mouse
13824984	Twq5_m	testis weight QTL 5 (mouse)					1	3069992	184732197	Mouse
12790984	Pcho7_m	plasma cholesterol 7 (mouse)					1	147219390	181219390	Mouse
1301151	Hdlq14_m	HDL QTL 14 (mouse)			Not determined		1	142489543	176489734	Mouse
1301149	Lrnx12_m	learning-contextual 12 (mouse)			Not determined		1	112008822	168186402	Mouse
4141233	Femwf12_m	femur work to failure 12 (mouse)			Not determined			141233173	175233272	Mouse
27226767	Tibl10_m	tibia length 10, 10 week (mouse)					1	121727729	164827569	Mouse
1301894	Skull2_m	skull morphology 2 (mouse)			Not determined		1	139602037	173602216	Mouse
1300740	Tne1_m	total number errors (mouse)			Not determined		1	139602037	173602216	Mouse
12790996	Aath2_m	aortic arch atherosclerosis 2 (mouse)					1	145077630	179077630	Mouse
1301385	Radpf2_m	radiation pulmonary fibrosis 2 (mouse)			Not determined		1	147125258	182873798	Mouse
12791001	Aath6_m	aortic arch atherosclerosis 6 (mouse)					1	147219390	181219390	Mouse
10412162	Nobq3_m	New Zealand obese QTL 3 (mouse)			Not determined		1	103933405	191225397	Mouse
1301135	Pas8_m	pulmonary adenoma susceptibility 8 (mouse)			Not determined		1	147125258	158233272	Mouse
1357493	Lgaq3_m	late growth adjusted QTL 3 (mouse)			Not determined		1	150193673	188359312	Mouse
1302193	Cpfd1_m	cerebellum pattern fissures (mouse)			Not determined		1	139602037	173602216	Mouse
13452392	Ity3a_m	immunity to S. typhimurium 3a (mouse)					1	149028612	154228616	Mouse
1357618	Splq5_m	spleen weight QTL 5 (mouse)			Not determined		1	150193673	188359312	Mouse
1301818	Ap1q_m	alcohol preference 1 QTL (mouse)			Not determined		1	146908199	167586222	Mouse
27226799	Feml5_m	femur length 5, 5 week (mouse)					1	122027729	164827569	Mouse
1301408	Lore8_m	loss of righting induced by ethanol 8 (mouse)			Not determined		1	135877901	169878015	Mouse
1357602	Vtbt2_m	vertebral trabecular bone trait 2 (mouse)			Not determined		1	139602037	173602216	Mouse
1357485	Lgq4_m	late growth QTL 4 (mouse)			Not determined		1	150193673	188359312	Mouse
1300777	Chol10_m	cholesterol 10 (mouse)			Not determined		9	147875502	181875616	Mouse
27095901	Scvln8_m	sacral vertebrae length 2, 10 week (mouse)					1	94127725	172027567	Mouse
11049576	Lmr8a_m	leishmaniasis resistance 8a (mouse)					1	139602037	173602216	Mouse
1302098	Eila1_m	ethanol induced locomotor activity 1 (mouse)			Not determined		1	112008822	175468938	Mouse
1301458	Skts8_m	skin tumor susceptibility 8 (mouse)			Not determined		1	135794822	169795012	Mouse
1301467	Pcir1_m	periosteal circumference 1 (mouse)			Not determined		1	141233173	175233272	Mouse
1300571	Opfa_m	open field activity (mouse)			Not determined		1	144531347	178531592	Mouse
1301722	Cia9_m	collagen induced arthritis QTL 9 (mouse)			Not determined		1	45783900	189303617	Mouse
1300696	Bpq2_m	blood pressure QTL 2 (mouse)			Not determined		1	139602037	173602216	Mouse
10045640	Jckm4_m	juvenile cystic kidney modifier 4 (mouse)			Not determined		1	116290836	150290937	Mouse
1301191	Stia1_m	serum transfer induced arthritis 1 (mouse)			Not determined		1	141233173	175233272	Mouse
1300934	Cfbw1_m	cystic fibrosis body weight 1 (mouse)			Not determined		1	145145207	179145325	Mouse
4141160	Cq1_m	cholesterol QTL 1 (mouse)			Not determined		1	139452188	173452308	Mouse
1558720	Bpq8_m	blood pressure QTL 8 (mouse)			Not determined		1	143284665	177284803	Mouse
12880408	V125Dq3_m	vitamin D active form serum level QTL 3 (mouse)					1	122927738	156927738	Mouse
1301710	Bmd5_m	bone mineral density 5 (mouse)			Not determined		1	139602037	173602216	Mouse
27095935	Ulnl5_m	ulna length 5, 10 week (mouse)					1	128727737	181327565	Mouse
4141149	Hbnr4_m	Heligmosomoides bakeri nematode resistance 4 (mouse)			Not determined			147125258	188983224	Mouse
10043899	Hdlq99_m	HDL QTL 99 (mouse)			Not determined		1	147875502	181875616	Mouse
1302128	Ity3_m	immunity to S. typhimurium 3 (mouse)			Not determined		11	131156308	165139464	Mouse
11537365	Cnes4_m	C. neoformans susceptibility locus 4 (mouse)					1	144449142	178449142	Mouse
27226743	Metcl7_m	metatarsal-calcaneal length 7, 10 week (mouse)					1	121727729	153875746	Mouse
27226740	Metcl13_m	metatarsal-calcaneal length 13, 16 week (mouse)					1	121727729	153775746	Mouse
1357567	Nidd3k_m	Nidd3 on KK-A<y> (mouse)			Not determined		7	147125258	169038913	Mouse
4142291	Aec2_m	autoimmune exocrinopathy 2 (mouse)			Not determined			52457737	182250592	Mouse
1357434	Obsty1_m	obesity 1 (mouse)			Not determined		1	136209950	170210094	Mouse
27095915	Scvln13_m	sacral vertebrae length 2, 16 week (mouse)					1	117527730	179827565	Mouse
11533913	Rd6m1_m	retinal degeneration 6 modifier 1 (mouse)					1	141233173	175233272	Mouse
1300841	Ssial1_m	susceptibility to sialadenitis 1 (mouse)			Not determined		1	63920002	153557562	Mouse
26884448	Sklq1_m	skull length QTL 1, 5 week (mouse)					1	75976637	181327565	Mouse
1301608	Emo3_m	emotionality 3 (mouse)			Not determined		1	129130858	163130993	Mouse
12910522	Scgq2_m	spontaneous crescentic glomerulonephritis QTL 2 (mouse)					1	147125258	171632257	Mouse

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	NM_001077237	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001357579	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_145511	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036163988	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036163989	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC121113	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC161432	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AJ298076	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152022	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK152955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC003331	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BE134939	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BY247764	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CB235715	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CX243768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ077804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ417871	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSMUST00000006167 ⟹ ENSMUSP00000006167

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,238,272 - 150,268,470 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,362,521 - 150,392,719 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000094477 ⟹ ENSMUSP00000092050

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,238,285 - 150,268,494 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,362,534 - 150,392,743 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000097546 ⟹ ENSMUSP00000095152

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,237,064 - 150,268,806 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,361,313 - 150,393,055 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000097547 ⟹ ENSMUSP00000095153

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,237,064 - 150,268,513 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,361,313 - 150,392,762 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000111913 ⟹ ENSMUSP00000107544

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,237,056 - 150,268,831 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,361,305 - 150,393,080 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000132809

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,250,555 - 150,258,225 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,374,804 - 150,382,474 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000140112

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,263,762 - 150,268,498 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,388,011 - 150,392,747 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000148389

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,251,283 - 150,268,688 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,375,532 - 150,392,937 (-)	Ensembl

Ensembl Acc Id:

ENSMUST00000150615

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	1	150,260,033 - 150,268,499 (-)	Ensembl
GRCm38.p6 Ensembl	1	150,384,282 - 150,392,748 (-)	Ensembl

RefSeq Acc Id:

NM_001077237 ⟹ NP_001070705

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	150,237,062 - 150,268,806 (-)	NCBI
GRCm38	1	150,361,311 - 150,393,055 (-)	ENTREZGENE
MGSCv37	1	152,208,441 - 152,240,185 (-)	RGD
Celera	1	152,800,497 - 152,832,235 (-)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

AGCCACCCTCGTCCTTATCCCGGAGGAGCAAGACGACCTTACCGTCAAAACCCCGGGATGTCATGGGTACTCCTCTGTGGCCACTTCTAGAAGCCGAGCCACCAGAGGTCATGGGTCACGGCAGGGTG
TCTCGACAGGCTCTGGGCTACCGCCACGATCTTAACGGTGCCCCGAGAGGGGCGGGGTGCAGGCCTCCCTCGCTTGGGTAGAAGAGCTGCGGAGATGGGTGCGGGACGGCTTGCGTCATCAGTCTGCA
CCCGTTGGGGCCGCGACCCGCGTTTGGAGTAGGAAGTGTCTCTGCTGTCGCTTTCTGATGAGATCATTGGCTGTGGACGTGGGGACCTGAGTGGCACCTGGCCTTTGAAGGCTGTTGAATTGGCTGTC
TATAATGGGAAGAACCTACATTGTAGAAGAGACTGTTGGCCAGTATCTTTCAAGCATCAACCTCCAGGGAAAACCTTTTGTCTCTGGTCTTTTGATAGGACAGTGTTCTTCACAAAAGGATTATGTGA
TTCTTGCCACTAGAACACCACCCAAAGAGGAACAAAATGACAAAGTCAAACAGCCGAGAGCTAAGTTGGATAATTTGGATGAAGAATGGGCCACAGAACATGCCAGCCAGGTGTCCAGAATGCTCCCT
GGAGGACTTGTGGTTCTTGGAATATTTATTATCACAACTTTAGAACTAGCAGATGATTTTCAAAATGCCCTGCGCAGACTAATATTTTCTATGGAAAAATCTATGAGTAGAAAAAGACTATGGGATGT
CACAGAGGACGAGGTCTCAGAACGAGTGACACTTCACATTTGTTCTTCTACAAAAAAAATATCTTGTCGAACTTACGATGTCCAAGATCCAAAGAGTTCAGCAAGACCCGCAGATTGGAAGTATCAGA
GTAGAGTGTCTGCCTCATGGCTGTCTCTAGACTGTACTGTTCACGTTAACATTCACATCCCACTGTCGGCTACTTCTGTCAGTTACACTCTGGAAAAAAACACAAAGAAAAAAAGCAGAGGAAATACG
CAAGCAACTGCTCATTCTTTTGATGTCCGAGTGCTAACACAGTTGCTCCTGAATTCGGACCACAGATCCACAGCCACAGTCCAAATCTGCAGTGGTTCTGTAAATCTTCGGGGAAATGTGAAATGCAG
AGCTTATATCCATAGCAACAGACCCAAGGTTAAAGATGCTGTGCAGGCAGTGAAGAGAGATATTTTGAACACAGTTGCTGATCGCTGTGAAATACTCTTTGAGGACCTGCTTCTGAATGAAATTCCAG
AAAAAAAAAATTATGAACTTCCTCAGAGAGTTTTTGTTCCCCTTCCTGGATCTACTGTAATGTTATGTGACTATAAGTTTGGTGATGAATCAGCTGAAGAAATCAGAGACCATTTTTCAGAGATGTTA
GATCATGAGATTCAAATAGAAGACTTGGAAATTGCAGAGGAAGTAAACACAGCTTGCATGACTTCCTCTGTGAATAGTGAGGCTTCACTGACCAACACAAGTGAAGAACAACCAGAACAACCAAAAAA
AACCATAGGAGTGAAAATTCAGCAAAACATAGGTGTGATCGCAGCACTAGCTGTTGCAGTGCTTGCTGCGGGCATCTCCTTCCATTACTTCAGTGATTAGAGCTCCCTGATCATCCAGAAATCACGGA
TCAACAGCTACAGAAAATAACGACATCAATGTCCACCTGCACTGAAGCTAGCAAGCAGCTCTGCTACGTTAACATCTGTTAGATGTGTTTCTGACTTACATGAAACCACCAGCTGCCTTGTTTAGCCC
TGCTTTGATTATCTGGCCCAGGTTTCCAAAAGTAAACTGTGCATCTAAATGGAGTTGCATGTAACAAATCACTATTATGTATTTTCAGAAGGGTCAAAATGTGAGCTATTTAAGAGTTTAGTGCTTTC
AAAAAAAAAAAAAAAAAAGTTTAGTGCTATTGAACCGGATCACACATTGATTAGAATATTGAAAGTTTAAGCAGACAGTAGTAACTATAGCAGATGTATCACTAGGCATTATCTTCATCCTAAAGGAC
TTTTCTAATATGCACCCAGTTGCCGTAGTTTATAGACACTGTTTAAATTGGAGGCCATGAATATTATTTTAAGCATACACATGGACTGTGGTTTCTTGGATGGCAGATCCAGTAGTAGCACTGCAGAA
TGCTGTTTGCCTCAATCCAGAAAAGAGAGAAATGTAAATCTGAGATGCTATCCTAGTTAGGGAAGTTAATATTCAGCAGCTCCCCCTTGTAGTTCTGTGTAGCTAGCTCCTGGCAGAAATAAACTAGA
AACACTCCTAACTTAGGCCCAAGACTCCCATAAGTTATGATCAAGCAATATTTCTTCCTGATTCTATATCATGAGGTACAAGATGCAGTGAGACTGGGAGAAATAAACTATAGGAAAAACACATTGAA
GTCATTTCCCAAGGTTCACGTCAACAATGTAGAGAGTAACAGGTGGGTAGAGCCACAGTGTGGGTGAAAGCCAAGTAGTGCTCCTCAGAATGAGGAGGAGAGGAAACTGTGGGCTGTTTAGTGGGAGT
GGACTTGGCTGAAGAGACCAGAGAATGGAAGGTAGAGCAGCAGGAAGGCTGGGAGGAGTGAGGAGGGACAAGGTCTAGGAGGACCAGGAGGCGGGAATGGGAGAGAGGCAGCACTTAGACAACAGGTT
TCTGCACACTCGTTACCAAACAGGCTTATAATTGAAGAAACAAACAAACAAACAAATAATTCACAAGTGAATCAAGTATGAAACAAGGTTCCTAAAAAGCCAAAGAGGTGATAAAGATGCCCAGCTAA
GGCAACTCAGTCACATGCATAGTAGACCGGAAGCAACAGTTTACCCAAGAAGGTGGTAAAATCTCTTCATAGTTGTGAGGGCAACTGAAAATCAGTGCAAAGTGAAACTCAGAAACAAACCGTTATTA
CAGAACTGAAAAAGGATGGTCCTTGATAAGAAGAATTCCTCAAGAAGCAAGCTTTGAAAGTGAAGTGTTAATGAGCAGACAAAACGATCAATATTGTAAATCTAAAGTGTTATTTGTATACAAAAATC
ATAATGAAGTATTTAAAGAAATTGTAATAGAAATTGTAAACAAATGTAACACCGAATAAATATTGTTAATGCAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

NM_001357579 ⟹ NP_001344508

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	150,237,056 - 150,268,831 (-)	NCBI
GRCm38	1	150,361,305 - 150,393,080 (-)	NCBI

Sequence:

show sequence

GCGCGGGGGCGCTACATAAGTACGCAGCCACCCTCGTCCTTATCCCGGAGGAGCAAGACGACCTTACCGTCAAAACCCCGGGATGTCATGGGTACTCCTCTGTGGCCACTTCTAGAAGCCGAGCCACC
AGAGGTCATGGGTCACGGCAGGGTGTCTCGACAGGCTCTGGGCTACCGCCACGATCTTAACGGTGCCCCGAGAGGGGCGGGGTGCAGGCCTCCCTCGCTTGGGTAGAAGAGCTGCGGAGATGGGTGCG
GGACGGCTTGCGTCATCAGTCTGCACCCGTTGGGGCCGCGACCCGCGTTTGGAGTAGGAAGTGTCTCTGCTGTCGCTTTCTGATGAGATCATTGGCTGTGGACGTGGGGACCTGAGTGGCACCTGGCC
TTTGAAGGCTGTTGAATTGGCTGTCTATAATGGGAAGAACCTACATTGTAGAAGAGACTGTTGGCCAGTATCTTTCAAGCATCAACCTCCAGGGAAAACCTTTTGTCTCTGGTCTTTTGATAGGACAG
AACACCACCCAAAGAGGAACAAAATGACAAAGTCAAACAGCCGAGAGCTAAGTTGGATAATTTGGATGAAGAATGGGCCACAGAACATGCCAGCCAGGTGTCCAGAATGCTCCCTGGAGGACTTGTGG
TTCTTGGAATATTTATTATCACAACTTTAGAACTAGCAGATGATTTTCAAAATGCCCTGCGCAGACTAATATTTTCTATGGAAAAATCTATGAGTAGAAAAAGACTATGGGATGTCACAGAGGACGAG
GTCTCAGAACGAGTGACACTTCACATTTGTTCTTCTACAAAAAAAATATCTTGTCGAACTTACGATGTCCAAGATCCAAAGAGTTCAGCAAGACCCGCAGATTGGAAGTATCAGAGTAGAGTGTCTGC
CTCATGGCTGTCTCTAGACTGTACTGTTCACGTTAACATTCACATCCCACTGTCGGCTACTTCTGTCAGTTACACTCTGGAAAAAAACACAAAGAGTGGACTTACACGCTGGGCCAAGCAAATAGAAA
ATGGTGTTTATCTGATTAATGGACAAGTTAAAGGCAACGATTGTGACTTATTAGAAGGACAGAAAAAAAGCAGAGGAAATACGCAAGCAACTGCTCATTCTTTTGATGTCCGAGTGCTAACACAGTTG
CTCCTGAATTCGGACCACAGATCCACAGCCACAGTCCAAATCTGCAGTGGTTCTGTAAATCTTCGGGGAAATGTGAAATGCAGAGCTTATATCCATAGCAACAGACCCAAGGTTAAAGATGCTGTGCA
GGCAGTGAAGAGAGATATTTTGAACACAGTTGCTGATCGCTGTGAAATACTCTTTGAGGACCTGCTTCTGAATGAAATTCCAGAAAAAAAAAATTATGAACTTCCTCAGAGAGTTTTTGTTCCCCTTC
CTGGATCTACTGTAATGTTATGTGACTATAAGTTTGGTGATGAATCAGCTGAAGAAATCAGAGACCATTTTTCAGAGATGTTAGATCATGAGATTCAAATAGAAGACTTGGAAATTGCAGAGGAAGTA
AACACAGCTTGCATGACTTCCTCTGTGAATAGTGAGGCTTCACTGACCAACACAAGTGAAGAACAACCAGAACAACCAAAAAAAACCATAGGAGTGAAAATTCAGCAAAACATAGGTGTGATCGCAGC
ACTAGCTGTTGCAGTGCTTGCTGCGGGCATCTCCTTCCATTACTTCAGTGATTAGAGCTCCCTGATCATCCAGAAATCACGGATCAACAGCTACAGAAAATAACGACATCAATGTCCACCTGCACTGA
AGCTAGCAAGCAGCTCTGCTACGTTAACATCTGTTAGATGTGTTTCTGACTTACATGAAACCACCAGCTGCCTTGTTTAGCCCTGCTTTGATTATCTGGCCCAGGTTTCCAAAAGTAAACTGTGCATC
TAAATGGAGTTGCATGTAACAAATCACTATTATGTATTTTCAGAAGGGTCAAAATGTGAGCTATTTAAGAGTTTAGTGCTTTCAAAAAAAAAAAAAAAAAAGTTTAGTGCTATTGAACCGGATCACAC
ATTGATTAGAATATTGAAAGTTTAAGCAGACAGTAGTAACTATAGCAGATGTATCACTAGGCATTATCTTCATCCTAAAGGACTTTTCTAATATGCACCCAGTTGCCGTAGTTTATAGACACTGTTTA
AATTGGAGGCCATGAATATTATTTTAAGCATACACATGGACTGTGGTTTCTTGGATGGCAGATCCAGTAGTAGCACTGCAGAATGCTGTTTGCCTCAATCCAGAAAAGAGAGAAATGTAAATCTGAGA
TGCTATCCTAGTTAGGGAAGTTAATATTCAGCAGCTCCCCCTTGTAGTTCTGTGTAGCTAGCTCCTGGCAGAAATAAACTAGAAACACTCCTAACTTAGGCCCAAGACTCCCATAAGTTATGATCAAG
CAATATTTCTTCCTGATTCTATATCATGAGGTACAAGATGCAGTGAGACTGGGAGAAATAAACTATAGGAAAAACACATTGAAGTCATTTCCCAAGGTTCACGTCAACAATGTAGAGAGTAACAGGTG
GGTAGAGCCACAGTGTGGGTGAAAGCCAAGTAGTGCTCCTCAGAATGAGGAGGAGAGGAAACTGTGGGCTGTTTAGTGGGAGTGGACTTGGCTGAAGAGACCAGAGAATGGAAGGTAGAGCAGCAGGA
AGGCTGGGAGGAGTGAGGAGGGACAAGGTCTAGGAGGACCAGGAGGCGGGAATGGGAGAGAGGCAGCACTTAGACAACAGGTTTCTGCACACTCGTTACCAAACAGGCTTATAATTGAAGAAACAAAC
AAACAAACAAATAATTCACAAGTGAATCAAGTATGAAACAAGGTTCCTAAAAAGCCAAAGAGGTGATAAAGATGCCCAGCTAAGGCAACTCAGTCACATGCATAGTAGACCGGAAGCAACAGTTTACC
CAAGAAGGTGGTAAAATCTCTTCATAGTTGTGAGGGCAACTGAAAATCAGTGCAAAGTGAAACTCAGAAACAAACCGTTATTACAGAACTGAAAAAGGATGGTCCTTGATAAGAAGAATTCCTCAAGA
AGCAAGCTTTGAAAGTGAAGTGTTAATGAGCAGACAAAACGATCAATATTGTAAATCTAAAGTGTTATTTGTATACAAAAATCATAATGAAGTATTTAAAGAAATTGTAATAGAAATTGTAAACAAAT
GTAACACCGAATAAATATTGTTAATGCAACATTAA

hide sequence

RefSeq Acc Id:

NM_145511 ⟹ NP_663486

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	150,237,062 - 150,268,806 (-)	NCBI
GRCm38	1	150,361,311 - 150,393,055 (-)	ENTREZGENE
MGSCv37	1	152,208,441 - 152,240,185 (-)	RGD
Celera	1	152,800,497 - 152,832,235 (-)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

AGCCACCCTCGTCCTTATCCCGGAGGAGCAAGACGACCTTACCGTCAAAACCCCGGGATGTCAT
GGGTACTCCTCTGTGGCCACTTCTAGAAGCCGAGCCACCAGAGGTCATGGGTCACGGCAGGGTGTCTCGACAGGCTCTGGGCTACCGCCACGATCTTAACGGTGCCCCGAGAGGGGCGGGGTGCAGGC
CTCCCTCGCTTGGGTAGAAGAGCTGCGGAGATGGGTGCGGGACGGCTTGCGTCATCAGTCTGCACCCGTTGGGGCCGCGACCCGCGTTTGGAGTAGGAAGTGTCTCTGCTGTCGCTTTCTGATGAGAT
CATTGGCTGTGGACGTGGGGACCTGAGTGGCACCTGGCCTTTGAAGGCTGTTGAATTGGCTGTCTATAATGGGAAGAACCTACATTGTAGAAGAGACTGTTGGCCAGTATCTTTCAAGCATCAACCTC
CAGGGAAAACCTTTTGTCTCTGGTCTTTTGATAGGACAGTGTTCTTCACAAAAGGATTATGTGATTCTTGCCACTAGAACACCACCCAAAGAGGAACAAAATGACAAAGTCAAACAGCCGAGAGCTAA
GTTGGATAATTTGGATGAAGAATGGGCCACAGAACATGCCAGCCAGGTGTCCAGAATGCTCCCTGGAGGACTTGTGGTTCTTGGAATATTTATTATCACAACTTTAGAACTAGCAGATGATTTTCAAA
ATGCCCTGCGCAGACTAATATTTTCTATGGAAAAATCTATGAGTAGAAAAAGACTATGGGATGTCACAGAGGACGAGGTCTCAGAACGAGTGACACTTCACATTTGTTCTTCTACAAAAAAAATATCT
TGTCGAACTTACGATGTCCAAGATCCAAAGAGTTCAGCAAGACCCGCAGATTGGAAGTATCAGAGTAGAGTGTCTGCCTCATGGCTGTCTCTAGACTGTACTGTTCACGTTAACATTCACATCCCACT
GTCGGCTACTTCTGTCAGTTACACTCTGGAAAAAAACACAAAGAGTGGACTTACACGCTGGGCCAAGCAAATAGAAAATGGTGTTTATCTGATTAATGGACAAGTTAAAGGCAACGATTGTGACTTAT
TAGAAGGACAGAAAAAAAGCAGAGGAAATACGCAAGCAACTGCTCATTCTTTTGATGTCCGAGTGCTAACACAGTTGCTCCTGAATTCGGACCACAGATCCACAGCCACAGTCCAAATCTGCAGTGGT
TCTGTAAATCTTCGGGGAAATGTGAAATGCAGAGCTTATATCCATAGCAACAGACCCAAGGTTAAAGATGCTGTGCAGGCAGTGAAGAGAGATATTTTGAACACAGTTGCTGATCGCTGTGAAATACT
CTTTGAGGACCTGCTTCTGAATGAAATTCCAGAAAAAAAAAATTATGAACTTCCTCAGAGAGTTTTTGTTCCCCTTCCTGGATCTACTGTAATGTTATGTGACTATAAGTTTGGTGATGAATCAGCTG
AAGAAATCAGAGACCATTTTTCAGAGATGTTAGATCATGAGATTCAAATAGAAGACTTGGAAATTGCAGAGGAAGTAAACACAGCTTGCATGACTTCCTCTGTGAATAGTGAGGCTTCACTGACCAAC
ACAAGTGAAGAACAACCAGAACAACCAAAAAAAACCATAGGAGTGAAAATTCAGCAAAACATAGGTGTGATCGCAGCACTAGCTGTTGCAGTGCTTGCTGCGGGCATCTCCTTCCATTACTTCAGTGA
TTAGAGCTCCCTGATCATCCAGAAATCACGGATCAACAGCTACAGAAAATAACGACATCAATGTCCACCTGCACTGAAGCTAGCAAGCAGCTCTGCTACGTTAACATCTGTTAGATGTGTTTCTGACT
TACATGAAACCACCAGCTGCCTTGTTTAGCCCTGCTTTGATTATCTGGCCCAGGTTTCCAAAAGTAAACTGTGCATCTAAATGGAGTTGCATGTAACAAATCACTATTATGTATTTTCAGAAGGGTCA
AAATGTGAGCTATTTAAGAGTTTAGTGCTTTCAAAAAAAAAAAAAAAAAAGTTTAGTGCTATTGAACCGGATCACACATTGATTAGAATATTGAAAGTTTAAGCAGACAGTAGTAACTATAGCAGATG
TATCACTAGGCATTATCTTCATCCTAAAGGACTTTTCTAATATGCACCCAGTTGCCGTAGTTTATAGACACTGTTTAAATTGGAGGCCATGAATATTATTTTAAGCATACACATGGACTGTGGTTTCT
TGGATGGCAGATCCAGTAGTAGCACTGCAGAATGCTGTTTGCCTCAATCCAGAAAAGAGAGAAATGTAAATCTGAGATGCTATCCTAGTTAGGGAAGTTAATATTCAGCAGCTCCCCCTTGTAGTTCT
GTGTAGCTAGCTCCTGGCAGAAATAAACTAGAAACACTCCTAACTTAGGCCCAAGACTCCCATAAGTTATGATCAAGCAATATTTCTTCCTGATTCTATATCATGAGGTACAAGATGCAGTGAGACTG
GGAGAAATAAACTATAGGAAAAACACATTGAAGTCATTTCCCAAGGTTCACGTCAACAATGTAGAGAGTAACAGGTGGGTAGAGCCACAGTGTGGGTGAAAGCCAAGTAGTGCTCCTCAGAATGAGGA
GGAGAGGAAACTGTGGGCTGTTTAGTGGGAGTGGACTTGGCTGAAGAGACCAGAGAATGGAAGGTAGAGCAGCAGGAAGGCTGGGAGGAGTGAGGAGGGACAAGGTCTAGGAGGACCAGGAGGCGGGA
ATGGGAGAGAGGCAGCACTTAGACAACAGGTTTCTGCACACTCGTTACCAAACAGGCTTATAATTGAAGAAACAAACAAACAAACAAATAATTCACAAGTGAATCAAGTATGAAACAAGGTTCCTAAA
AAGCCAAAGAGGTGATAAAGATGCCCAGCTAAGGCAACTCAGTCACATGCATAGTAGACCGGAAGCAACAGTTTACCCAAGAAGGTGGTAAAATCTCTTCATAGTTGTGAGGGCAACTGAAAATCAGT
GCAAAGTGAAACTCAGAAACAAACCGTTATTACAGAACTGAAAAAGGATGGTCCTTGATAAGAAGAATTCCTCAAGAAGCAAGCTTTGAAAGTGAAGTGTTAATGAGCAGACAAAACGATCAATATTG
TAAATCTAAAGTGTTATTTGTATACAAAAATCATAATGAAGTATTTAAAGAAATTGTAATAGAAATTGTAAACAAATGTAACACCGAATAAATATTGTTAATGCAAAAAAAAAAAAAAA

hide sequence

RefSeq Acc Id:

XM_036163988 ⟹ XP_036019881

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	150,237,062 - 150,268,532 (-)	NCBI

Sequence:

show sequence

CGCGTTTGGAGTAGGAAGTGTCTCTGCTGTCGCTTTCTGATGAGATCATTGGCTGTGGACGTGGGGACCTGAGTGGCACCTGGCCTTTGAAGGCTGTTGAATTGGCTGTCTATAATGGGAAGAACCTA
CATTGTAGAAGAGACTGTTGGCCAGTATCTTTCAAGCATCAACCTCCAGGGAAAACCTTTTGTCTCTGGTCTTTTGATAGGACAGTGTTCTTCACAAAAGGATTATGTGATTCTTGCCACTAGAACAC
CACCCAAAGAGGAACAAAATGACAAAGTCAAACAGCCGAGAGCTAAGTTGGATAATTTGGATGAAGAATGGGCCACAGAACATGCCAGCCAGGTGTCCAGAATGCTCCCTGGAGGACTTGTGGTTCTT
GGAATATTTATTATCACAACTTTAGAACTAGCAGATGATTTTCAAAATGCCCTGCGCAGAAGTTCAGCAAGACCCGCAGATTGGAAGTATCAGAGTAGAGTGTCTGCCTCATGGCTGTCTCTAGACTG
TACTGTTCACGTTAACATTCACATCCCACTGTCGGCTACTTCTGTCAGTTACACTCTGGAAAAAAACACAAAGAGTGGACTTACACGCTGGGCCAAGCAAATAGAAAATGGTGTTTATCTGATTAATG
GACAAGTTAAAGGCAACGATTGTGACTTATTAGAAGGACAGAAAAAAAGCAGAGGAAATACGCAAGCAACTGCTCATTCTTTTGATGTCCGAGTGCTAACACAGTTGCTCCTGAATTCGGACCACAGA
TCCACAGCCACAGTCCAAATCTGCAGTGGTTCTGTAAATCTTCGGGGAAATGTGAAATGCAGAGCTTATATCCATAGCAACAGACCCAAGGTTAAAGATGCTGTGCAGGCAGTGAAGAGAGATATTTT
GAACACAGTTGCTGATCGCTGTGAAATACTCTTTGAGGACCTGCTTCTGAATGAAATTCCAGAAAAAAAAAATTATGAACTTCCTCAGAGAGTTTTTGTTCCCCTTCCTGGATCTACTGTAATGTTAT
GTGACTATAAGTTTGGTGATGAATCAGCTGAAGAAATCAGAGACCATTTTTCAGAGATGTTAGATCATGAGATTCAAATAGAAGACTTGGAAATTGCAGAGGAAGTAAACACAGCTTGCATGACTTCC
TCTGTGAATAGTGAGGCTTCACTGACCAACACAAGTGAAGAACAACCAGAACAACCAAAAAAAACCATAGGAGTGAAAATTCAGCAAAACATAGGTGTGATCGCAGCACTAGCTGTTGCAGTGCTTGC
TGCGGGCATCTCCTTCCATTACTTCAGTGATTAGAGCTCCCTGATCATCCAGAAATCACGGATCAACAGCTACAGAAAATAACGACATCAATGTCCACCTGCACTGAAGCTAGCAAGCAGCTCTGCTA
CGTTAACATCTGTTAGATGTGTTTCTGACTTACATGAAACCACCAGCTGCCTTGTTTAGCCCTGCTTTGATTATCTGGCCCAGGTTTCCAAAAGTAAACTGTGCATCTAAATGGAGTTGCATGTAACA
AATCACTATTATGTATTTTCAGAAGGGTCAAAATGTGAGCTATTTAAGAGTTTAGTGCTTTCAAAAAAAAAAAAAAAAAAGTTTAGTGCTATTGAACCGGATCACACATTGATTAGAATATTGAAAGT
TTAAGCAGACAGTAGTAACTATAGCAGATGTATCACTAGGCATTATCTTCATCCTAAAGGACTTTTCTAATATGCACCCAGTTGCCGTAGTTTATAGACACTGTTTAAATTGGAGGCCATGAATATTA
TTTTAAGCATACACATGGACTGTGGTTTCTTGGATGGCAGATCCAGTAGTAGCACTGCAGAATGCTGTTTGCCTCAATCCAGAAAAGAGAGAAATGTAAATCTGAGATGCTATCCTAGTTAGGGAAGT
TAATATTCAGCAGCTCCCCCTTGTAGTTCTGTGTAGCTAGCTCCTGGCAGAAATAAACTAGAAACACTCCTAACTTAGGCCCAAGACTCCCATAAGTTATGATCAAGCAATATTTCTTCCTGATTCTA
TATCATGAGGTACAAGATGCAGTGAGACTGGGAGAAATAAACTATAGGAAAAACACATTGAAGTCATTTCCCAAGGTTCACGTCAACAATGTAGAGAGTAACAGGTGGGTAGAGCCACAGTGTGGGTG
AAAGCCAAGTAGTGCTCCTCAGAATGAGGAGGAGAGGAAACTGTGGGCTGTTTAGTGGGAGTGGACTTGGCTGAAGAGACCAGAGAATGGAAGGTAGAGCAGCAGGAAGGCTGGGAGGAGTGAGGAGG
GACAAGGTCTAGGAGGACCAGGAGGCGGGAATGGGAGAGAGGCAGCACTTAGACAACAGGTTTCTGCACACTCGTTACCAAACAGGCTTATAATTGAAGAAACAAACAAACAAACAAATAATTCACAA
GTGAATCAAGTATGAAACAAGGTTCCTAAAAAGCCAAAGAGGTGATAAAGATGCCCAGCTAAGGCAACTCAGTCACATGCATAGTAGACCGGAAGCAACAGTTTACCCAAGAAGGTGGTAAAATCTCT
TCATAGTTGTGAGGGCAACTGAAAATCAGTGCAAAGTGAAACTCAGAAACAAACCGTTATTACAGAACTGAAAAAGGATGGTCCTTGATAAGAAGAATTCCTCAAGAAGCAAGCTTTGAAAGTGAAGT
GTTAATGAGCAGACAAAACGATCAATATTGTAAATCTAAAGTGTTATTTGTATACAAAAATCATAATGAAGTATTTAAAGAAATTGTAATAGAAATTGTAAACAAATGTAACACCGAATAAATATTGT
TAATGCAA

hide sequence

RefSeq Acc Id:

XM_036163989 ⟹ XP_036019882

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	150,237,062 - 150,268,532 (-)	NCBI

Sequence:

show sequence

CGCGTTTGGAGTAGGAAGTGTCTCTGCTGTCGCTTTCTGATGAGATCATTGGCTGTGGACGTGG
GGACCTGAGTGGCACCTGGCCTTTGAAGGCTGTTGAATTGGCTGTCTATAATGGGAAGAACCTACATTGTAGAAGAGACTGTTGGCCAGTATCTTTCAAGCATCAACCTCCAGGGAAAACCTTTTGTC
TCTGGTCTTTTGATAGGACAGAACACCACCCAAAGAGGAACAAAATGACAAAGTCAAACAGCCGAGAGCTAAGTTGGATAATTTGGATGAAGAATGGGCCACAGAACATGCCAGCCAGGTGTCCAGAA
TGCTCCCTGGAGGACTTGTGGTTCTTGGAATATTTATTATCACAACTTTAGAACTAGCAGATGATTTTCAAAATGCCCTGCGCAGAAGTTCAGCAAGACCCGCAGATTGGAAGTATCAGAGTAGAGTG
TCTGCCTCATGGCTGTCTCTAGACTGTACTGTTCACGTTAACATTCACATCCCACTGTCGGCTACTTCTGTCAGTTACACTCTGGAAAAAAACACAAAGAGTGGACTTACACGCTGGGCCAAGCAAAT
AGAAAATGGTGTTTATCTGATTAATGGACAAGTTAAAGGCAACGATTGTGACTTATTAGAAGGACAGAAAAAAAGCAGAGGAAATACGCAAGCAACTGCTCATTCTTTTGATGTCCGAGTGCTAACAC
AGTTGCTCCTGAATTCGGACCACAGATCCACAGCCACAGTCCAAATCTGCAGTGGTTCTGTAAATCTTCGGGGAAATGTGAAATGCAGAGCTTATATCCATAGCAACAGACCCAAGGTTAAAGATGCT
GTGCAGGCAGTGAAGAGAGATATTTTGAACACAGTTGCTGATCGCTGTGAAATACTCTTTGAGGACCTGCTTCTGAATGAAATTCCAGAAAAAAAAAATTATGAACTTCCTCAGAGAGTTTTTGTTCC
CCTTCCTGGATCTACTGTAATGTTATGTGACTATAAGTTTGGTGATGAATCAGCTGAAGAAATCAGAGACCATTTTTCAGAGATGTTAGATCATGAGATTCAAATAGAAGACTTGGAAATTGCAGAGG
AAGTAAACACAGCTTGCATGACTTCCTCTGTGAATAGTGAGGCTTCACTGACCAACACAAGTGAAGAACAACCAGAACAACCAAAAAAAACCATAGGAGTGAAAATTCAGCAAAACATAGGTGTGATC
GCAGCACTAGCTGTTGCAGTGCTTGCTGCGGGCATCTCCTTCCATTACTTCAGTGATTAGAGCTCCCTGATCATCCAGAAATCACGGATCAACAGCTACAGAAAATAACGACATCAATGTCCACCTGC
ACTGAAGCTAGCAAGCAGCTCTGCTACGTTAACATCTGTTAGATGTGTTTCTGACTTACATGAAACCACCAGCTGCCTTGTTTAGCCCTGCTTTGATTATCTGGCCCAGGTTTCCAAAAGTAAACTGT
GCATCTAAATGGAGTTGCATGTAACAAATCACTATTATGTATTTTCAGAAGGGTCAAAATGTGAGCTATTTAAGAGTTTAGTGCTTTCAAAAAAAAAAAAAAAAAAGTTTAGTGCTATTGAACCGGAT
CACACATTGATTAGAATATTGAAAGTTTAAGCAGACAGTAGTAACTATAGCAGATGTATCACTAGGCATTATCTTCATCCTAAAGGACTTTTCTAATATGCACCCAGTTGCCGTAGTTTATAGACACT
GTTTAAATTGGAGGCCATGAATATTATTTTAAGCATACACATGGACTGTGGTTTCTTGGATGGCAGATCCAGTAGTAGCACTGCAGAATGCTGTTTGCCTCAATCCAGAAAAGAGAGAAATGTAAATC
TGAGATGCTATCCTAGTTAGGGAAGTTAATATTCAGCAGCTCCCCCTTGTAGTTCTGTGTAGCTAGCTCCTGGCAGAAATAAACTAGAAACACTCCTAACTTAGGCCCAAGACTCCCATAAGTTATGA
TCAAGCAATATTTCTTCCTGATTCTATATCATGAGGTACAAGATGCAGTGAGACTGGGAGAAATAAACTATAGGAAAAACACATTGAAGTCATTTCCCAAGGTTCACGTCAACAATGTAGAGAGTAAC
AGGTGGGTAGAGCCACAGTGTGGGTGAAAGCCAAGTAGTGCTCCTCAGAATGAGGAGGAGAGGAAACTGTGGGCTGTTTAGTGGGAGTGGACTTGGCTGAAGAGACCAGAGAATGGAAGGTAGAGCAG
CAGGAAGGCTGGGAGGAGTGAGGAGGGACAAGGTCTAGGAGGACCAGGAGGCGGGAATGGGAGAGAGGCAGCACTTAGACAACAGGTTTCTGCACACTCGTTACCAAACAGGCTTATAATTGAAGAAA
CAAACAAACAAACAAATAATTCACAAGTGAATCAAGTATGAAACAAGGTTCCTAAAAAGCCAAAGAGGTGATAAAGATGCCCAGCTAAGGCAACTCAGTCACATGCATAGTAGACCGGAAGCAACAGT
TTACCCAAGAAGGTGGTAAAATCTCTTCATAGTTGTGAGGGCAACTGAAAATCAGTGCAAAGTGAAACTCAGAAACAAACCGTTATTACAGAACTGAAAAAGGATGGTCCTTGATAAGAAGAATTCCT
CAAGAAGCAAGCTTTGAAAGTGAAGTGTTAATGAGCAGACAAAACGATCAATATTGTAAATCTAAAGTGTTATTTGTATACAAAAATCATAATGAAGTATTTAAAGAAATTGTAATAGAAATTGTAAA
CAAATGTAACACCGAATAAATATTGTTAATGCAA

hide sequence


Protein RefSeqs	NP_001070705	(Get FASTA)	NCBI Sequence Viewer
	NP_001344508	(Get FASTA)	NCBI Sequence Viewer
	NP_663486	(Get FASTA)	NCBI Sequence Viewer
	XP_036019881	(Get FASTA)	NCBI Sequence Viewer
	XP_036019882	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH03331	(Get FASTA)	NCBI Sequence Viewer
	AAY83272	(Get FASTA)	NCBI Sequence Viewer
	BAE30884	(Get FASTA)	NCBI Sequence Viewer
	EDL39480	(Get FASTA)	NCBI Sequence Viewer
	EDL39481	(Get FASTA)	NCBI Sequence Viewer
	EDL39482	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000006167.7
	ENSMUSP00000095152.3
	ENSMUSP00000095153
	ENSMUSP00000095153.4
	ENSMUSP00000107544
	ENSMUSP00000107544.3
GenBank Protein	Q4PJX1	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	NP_001070705 ⟸ NM_001077237
- Peptide Label:	isoform 2
- UniProtKB:	Q4PJX1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGRTYIVEETVGQYLSSINLQGKPFVSGLLIGQCSSQKDYVILATRTPPKEEQNDKVKQPRAKLDNLDEEWATEHASQVSRMLPGGLVVLGIFIITTLELADDFQNALRRLIFSMEKSMSRKRLWDVT EDEVSERVTLHICSSTKKISCRTYDVQDPKSSARPADWKYQSRVSASWLSLDCTVHVNIHIPLSATSVSYTLEKNTKKKSRGNTQATAHSFDVRVLTQLLLNSDHRSTATVQICSGSVNLRGNVKCRA YIHSNRPKVKDAVQAVKRDILNTVADRCEILFEDLLLNEIPEKKNYELPQRVFVPLPGSTVMLCDYKFGDESAEEIRDHFSEMLDHEIQIEDLEIAEEVNTACMTSSVNSEASLTNTSEEQPEQPKKT IGVKIQQNIGVIAALAVAVLAAGISFHYFSD hide sequence

RefSeq Acc Id:	NP_663486 ⟸ NM_145511
- Peptide Label:	isoform 1
- UniProtKB:	Q3U8Y3 (UniProtKB/Swiss-Prot), Q99J66 (UniProtKB/Swiss-Prot), Q4PJX1 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MGRTYIVEETVGQYLSSINLQGKPFVSGLLIGQCSSQKDYVILATRTPPKEEQNDKVKQPRAKL DNLDEEWATEHASQVSRMLPGGLVVLGIFIITTLELADDFQNALRRLIFSMEKSMSRKRLWDVTEDEVSERVTLHICSSTKKISCRTYDVQDPKSSARPADWKYQSRVSASWLSLDCTVHVNIHIPLS ATSVSYTLEKNTKSGLTRWAKQIENGVYLINGQVKGNDCDLLEGQKKSRGNTQATAHSFDVRVLTQLLLNSDHRSTATVQICSGSVNLRGNVKCRAYIHSNRPKVKDAVQAVKRDILNTVADRCEILF EDLLLNEIPEKKNYELPQRVFVPLPGSTVMLCDYKFGDESAEEIRDHFSEMLDHEIQIEDLEIAEEVNTACMTSSVNSEASLTNTSEEQPEQPKKTIGVKIQQNIGVIAALAVAVLAAGISFHYFSD hide sequence

RefSeq Acc Id:	NP_001344508 ⟸ NM_001357579
- Peptide Label:	isoform 3 precursor

Ensembl Acc Id:

ENSMUSP00000107544 ⟸ ENSMUST00000111913

Ensembl Acc Id:

ENSMUSP00000006167 ⟸ ENSMUST00000006167

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q4PJX1-F1-model_v2	AlphaFold	Q4PJX1	1-447	view protein structure

RGD ID:

6875204

Promoter ID:

EPDNEW_M1052

Type:

multiple initiation site

Name:

BC003331_1

Description:

Mus musculus cDNA sequence BC003331 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M1054

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	150,392,750 - 150,392,810	EPDNEW

RGD ID:

6875208

Promoter ID:

EPDNEW_M1054

Type:

initiation region

Name:

BC003331_2

Description:

Mus musculus cDNA sequence BC003331 , transcript variant 2, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M1052

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	150,393,062 - 150,393,122	EPDNEW

RGD ID:

6817422

Promoter ID:

MM_KWN:2370

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, BoneMarrow_2Hour, Brain, Kidney, Liver, MEF_B4, MEF_B6

Transcripts:

ENSMUST00000006167, ENSMUST00000094477, ENSMUST00000097546, ENSMUST00000111912, NM_001077237, OTTMUST00000051349, OTTMUST00000051353, OTTMUST00000051354, OTTMUST00000051355

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	1	152,239,751 - 152,240,251 (-)	MPROMDB

Database	Acc Id	Source(s)
Ensembl Genes	ENSMUSG00000006010	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000006167.13	UniProtKB/Swiss-Prot
	ENSMUST00000097546.9	UniProtKB/Swiss-Prot
	ENSMUST00000097547	ENTREZGENE
	ENSMUST00000097547.10	UniProtKB/Swiss-Prot
	ENSMUST00000111913	ENTREZGENE
	ENSMUST00000111913.9	UniProtKB/Swiss-Prot
InterPro	ODR-4-like	UniProtKB/Swiss-Prot
KEGG Report	mmu:226499	UniProtKB/Swiss-Prot
MGD	MGI:2385108	ENTREZGENE
NCBI Gene	226499	ENTREZGENE
PANTHER	PROTEIN ODR-4 HOMOLOG	UniProtKB/Swiss-Prot
	PTHR33966	UniProtKB/Swiss-Prot
Pfam	ODR4-like	UniProtKB/Swiss-Prot
PhenoGen	Odr4	PhenoGen
UniProt	A0A0A0MQB0_MOUSE	UniProtKB/TrEMBL
	ODR4_MOUSE	UniProtKB/Swiss-Prot
	Q3U8Y3	ENTREZGENE
	Q4PJX1	ENTREZGENE
	Q99J66	ENTREZGENE
UniProt Secondary	Q3U8Y3	UniProtKB/Swiss-Prot
	Q99J66	UniProtKB/Swiss-Prot

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2018-05-29	Odr4	odr4 GPCR localization factor homolog	BC003331	cDNA sequence BC003331	Symbol and/or name change	5135510	APPROVED
2016-03-10	BC003331	cDNA sequence BC003331	1810053E15Rik	RIKEN cDNA 1810053E15 gene	Data merged from RGD:1609495	737654	PROVISIONAL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar