Xpr1 (xenotropic and polytropic retrovirus receptor 1) - Rat Genome Database
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Gene: Xpr1 (xenotropic and polytropic retrovirus receptor 1) Mus musculus
Analyze
Symbol: Xpr1
Name: xenotropic and polytropic retrovirus receptor 1
RGD ID: 1315238
MGI Page MGI
Description: Exhibits virus receptor activity. Involved in response to virus. Predicted to localize to Golgi apparatus and intrinsic component of plasma membrane. Is expressed in central nervous system; dorsal root ganglion; lower jaw molar; and neural retina. Human ortholog(s) of this gene implicated in basal ganglia calcification. Orthologous to human XPR1 (xenotropic and polytropic retrovirus receptor 1); INTERACTS WITH 1,2-dimethylhydrazine; 2,3,7,8-tetrachlorodibenzodioxine; 3,4-methylenedioxymethamphetamine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: protein SYG1 homolog; receptor for MCF virus 1; Rmc; Rmc-; Rmc-1; Rmc1; suppressor of yeast G deletion; susceptibility to xenotropic virus; Sxv; Syg; Syg1; xenotropic and polytropic murine leukemia virus receptor; xenotropic and polytropic retrovirus receptor 1 homolog; XR
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391155,151,403 - 155,293,190 (-)NCBIGRCm39mm39
GRCm381155,275,657 - 155,417,444 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1155,275,701 - 155,417,415 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,122,787 - 157,264,574 (-)NCBIGRCm37mm9NCBIm37
MGSCv361157,037,875 - 157,179,662 (-)NCBImm8
Celera1157,707,719 - 157,849,217 (-)NCBICelera
Cytogenetic Map1G3NCBI
cM Map166.49NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:2991590   PMID:6310150   PMID:8551621   PMID:8889548   PMID:9927670   PMID:9988277   PMID:10349636   PMID:10373331   PMID:10516044   PMID:10575084   PMID:10922068   PMID:11042159  
PMID:11076861   PMID:11217851   PMID:12477932   PMID:15033168   PMID:16141072   PMID:16141073   PMID:16354307   PMID:18287559   PMID:20633538   PMID:20844050   PMID:20943975   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:22090134   PMID:23824809   PMID:24374333   PMID:25151060   PMID:26282858   PMID:27799484   PMID:28766044   PMID:28892649   PMID:31498925  


Genomics

Comparative Map Data
Xpr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391155,151,403 - 155,293,190 (-)NCBIGRCm39mm39
GRCm381155,275,657 - 155,417,444 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1155,275,701 - 155,417,415 (-)EnsemblGRCm38mm10GRCm38
MGSCv371157,122,787 - 157,264,574 (-)NCBIGRCm37mm9NCBIm37
MGSCv361157,037,875 - 157,179,662 (-)NCBImm8
Celera1157,707,719 - 157,849,217 (-)NCBICelera
Cytogenetic Map1G3NCBI
cM Map166.49NCBI
XPR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1180,632,022 - 180,890,279 (+)EnsemblGRCh38hg38GRCh38
GRCh381180,632,022 - 180,890,279 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371180,601,146 - 180,859,415 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361178,867,796 - 179,122,103 (+)NCBINCBI36hg18NCBI36
Build 341177,332,829 - 177,587,136NCBI
Celera1153,708,013 - 153,966,433 (+)NCBI
Cytogenetic Map1q25.3NCBI
HuRef1151,831,599 - 152,090,309 (+)NCBIHuRef
CHM1_11182,022,943 - 182,282,207 (+)NCBICHM1_1
Xpr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01372,918,552 - 73,056,785 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1372,918,490 - 73,056,875 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01377,853,049 - 77,991,192 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41370,238,356 - 70,379,254 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11370,252,050 - 70,393,440 (-)NCBI
Celera1367,321,277 - 67,459,182 (-)NCBICelera
Cytogenetic Map13q21NCBI
Xpr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540619,797,245 - 19,974,911 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495540619,831,398 - 19,980,994 (+)NCBIChiLan1.0ChiLan1.0
XPR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11159,789,973 - 160,035,390 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1159,790,170 - 160,029,208 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01156,121,029 - 156,367,565 (+)NCBIMhudiblu_PPA_v0panPan3
XPR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl714,165,608 - 14,379,822 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1714,165,608 - 14,379,822 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Xpr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364818,462,714 - 8,601,824 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
XPR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9122,237,957 - 122,460,535 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19122,237,954 - 122,461,669 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29134,232,141 - 134,329,949 (-)NCBISscrofa10.2Sscrofa10.2susScr3
XPR1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12548,509,854 - 48,756,479 (-)NCBI
ChlSab1.1 Ensembl2548,517,525 - 48,756,458 (-)Ensembl
Xpr1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624771941,835 - 1,147,314 (+)NCBI

Position Markers
D5Mit392.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7A3UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map6F1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic MapXF5UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic MapXF3UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map15A1UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map13A3.1UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map2E1UniSTS
cM Map528.0UniSTS
Whitehead Genetic518.6UniSTS
D1Dcr13  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381155,339,386 - 155,339,486UniSTSGRCm38
MGSCv371157,186,516 - 157,186,616UniSTSGRCm37
Celera1157,771,559 - 157,771,659UniSTS
Cytogenetic Map1G3UniSTS
cM Map1 UniSTS
UniSTS:234242  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381155,279,060 - 155,279,326UniSTSGRCm38
MGSCv371157,126,190 - 157,126,456UniSTSGRCm37
Celera1157,711,122 - 157,711,388UniSTS
Cytogenetic Map1G3UniSTS
cM Map181.6UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301710Bmd5_mbone mineral density 5 (mouse)Not determined1139774467173774646Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
1301458Skts8_mskin tumor susceptibility 8 (mouse)Not determined1135919071169919261Mouse
1301467Pcir1_mperiosteal circumference 1 (mouse)Not determined1141405603175405702Mouse
1301488Tir3b_mtrypansomiasis infection response 3b (mouse)Not determined1128551097157361794Mouse
1300934Cfbw1_mcystic fibrosis body weight 1 (mouse)Not determined1145317638179317756Mouse
1301818Ap1q_malcohol preference 1 QTL (mouse)Not determined1147032461167758653Mouse
1301191Stia1_mserum transfer induced arthritis 1 (mouse)Not determined1141405603175405702Mouse
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139774467173774646Mouse
1558720Bpq8_mblood pressure QTL 8 (mouse)Not determined1143457095177457233Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129255120163255255Mouse
1301614Cgnz1_mchronic glomerulonephritis in NZM 1 (mouse)Not determined1152211172186211344Mouse
1302193Cpfd1_mcerebellum pattern fissures (mouse)Not determined1139774467173774646Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
1300777Chol10_mcholesterol 10 (mouse)Not determined9148047933182048047Mouse
1300837Vmbic1_mventral midbrain iron content 1 (mouse)Not determined1139624618173624738Mouse
1357434Obsty1_mobesity 1 (mouse)Not determined1136334204170334348Mouse
1301894Skull2_mskull morphology 2 (mouse)Not determined1139774467173774646Mouse
1357602Vtbt2_mvertebral trabecular bone trait 2 (mouse)Not determined1139774467173774646Mouse
1357618Splq5_mspleen weight QTL 5 (mouse)Not determined1150317922188627115Mouse
4141233Femwf12_mfemur work to failure 12 (mouse)Not determined141405603175405702Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131228571165311895Mouse
1300571Opfa_mopen field activity (mouse)Not determined1144703778178704023Mouse
1300696Bpq2_mblood pressure QTL 2 (mouse)Not determined1139774467173774646Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139774467173774646Mouse
1357493Lgaq3_mlate growth adjusted QTL 3 (mouse)Not determined1150317922188627115Mouse
1301025Lbw7_mlupus NZB x NZW 7 (mouse)Not determined1152211172186211344Mouse
1301385Radpf2_mradiation pulmonary fibrosis 2 (mouse)Not determined1147249520183092234Mouse
1301408Lore8_mloss of righting induced by ethanol 8 (mouse)Not determined1136002150170002264Mouse
1357889Lprq3_mlipoprotein QTL 3 (mouse)Not determined1152211172186211344Mouse
4141346Skmw12_mskeletal muscle weight 12 (mouse)Not determined150929168184929353Mouse
1301135Pas8_mpulmonary adenoma susceptibility 8 (mouse)Not determined1147249520158405702Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1301151Hdlq14_mHDL QTL 14 (mouse)Not determined1142661973176662164Mouse
1301164Tir3c_mtrypansomiasis infection response 3c (mouse)Not determined1154804480188804689Mouse
1357567Nidd3k_mNidd3 on KK-A<y> (mouse)Not determined7147249520169211344Mouse
4141149Hbnr4_mHeligmosomoides bakeri nematode resistance 4 (mouse)Not determined147249520189251027Mouse
4141160Cq1_mcholesterol QTL 1 (mouse)Not determined1139624618173624738Mouse
1301301Sle1_msystemic lupus erythmatosus susceptibility 1 (mouse)Not determined1152211172186211344Mouse
1300969Sluc5_msusceptibility to lung cancer 5 (mouse)Not determined1151358674185358833Mouse
1357485Lgq4_mlate growth QTL 4 (mouse)Not determined1150317922188627115Mouse
4142119Bpq21_mblood pressure QTL 21 (mouse)Not determined1152211172186211344Mouse
4142149Ctex_mCtla4 expression QTL (mouse)Not determined1153681660175641372Mouse
4142159Nba2_mNew Zealand Black autoimmunity 2 (mouse)Not determined152007542186007711Mouse
4141554Cfmq1_mcystic fibrosis modifier QTL 1 (mouse)Not determined1152211172186211344Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
10043899Hdlq99_mHDL QTL 99 (mouse)Not determined1148047933182048047Mouse
10043963Obq25_mobesity QTL 25 (mouse)Not determined1154582944188582944Mouse
10412074Nhdlt1_mnon-HDL cholesterol and triglyceride levels 1 (mouse)Not determined1153848421187848536Mouse
10054490Opefa_mopen field activity (mouse)Not determined1153885284187885284Mouse
10054270Nba10_mNew Zealand Black autoimmunity 10 (mouse)Not determined1152919071186706423Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
4142014Wbcq5_mwhite blood cell quantitative locus 5 (mouse)Not determined1141267440175267586Mouse
12903996Cfq5_mconditioned fear QTL 5 (mouse)1150730586159479894Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128800000181500000Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
13464138Hdlq107_mHDL QTL 107 (mouse)1152305175186305175Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1123000000157000000Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195600000162200000Mouse
11049576Lmr8a_mleishmaniasis resistance 8a (mouse)1139774467173774646Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147391821181391821Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122100000165000000Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147391821181391821Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145250061179250061Mouse
11533913Rd6m1_mretinal degeneration 6 modifier 1 (mouse)1141405603175405702Mouse
12904957Gmmq1_mgastrocnemius muscle mass QTL 1 (mouse)1155175373189175373Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
11537365Cnes4_mC. neoformans susceptibility locus 4 (mouse)1144621573178621573Mouse
12904936Edlmmq1_mextensor digitorum longus muscle mass QTL 1 (mouse)1155175373189175373Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
12910522Scgq2_mspontaneous crescentic glomerulonephritis QTL 2 (mouse)1147249520171804689Mouse
12904944Tammq1_mtibialis anterior muscle mass QTL 1 (mouse)1155175373189175373Mouse
14746980Manh50_mmandible shape 50 (mouse)1134255813168255813Mouse
11251722Ewc1_methanol withdrawal and consumption 1 (mouse)1152305175186305175Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121800000165000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3469
Count of miRNA genes:874
Interacting mature miRNAs:1213
Transcripts:ENSMUST00000027741, ENSMUST00000111774, ENSMUST00000111775, ENSMUST00000129271, ENSMUST00000139925, ENSMUST00000143529
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_011273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC110268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC116712 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF114753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF131102 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF198104 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK033610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK043549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK048887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK054130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK082643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017146 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC075721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC153872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY122762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ022853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323663 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323668 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323672 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323673 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323674 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HQ323680 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000027741   ⟹   ENSMUSP00000027741
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,275,701 - 155,417,329 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111774   ⟹   ENSMUSP00000107404
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,282,668 - 155,417,415 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111775   ⟹   ENSMUSP00000107405
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,278,982 - 155,417,407 (-)Ensembl
RefSeq Acc Id: ENSMUST00000129271
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,322,772 - 155,417,395 (-)Ensembl
RefSeq Acc Id: ENSMUST00000139925
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,282,183 - 155,309,642 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143529
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,381,592 - 155,384,662 (-)Ensembl
RefSeq Acc Id: ENSMUST00000192359
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1155,289,290 - 155,292,027 (-)Ensembl
RefSeq Acc Id: NM_011273   ⟹   NP_035403
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391155,151,403 - 155,293,190 (-)NCBI
GRCm381155,275,657 - 155,417,444 (-)ENTREZGENE
MGSCv371157,122,787 - 157,264,574 (-)RGD
Celera1157,707,719 - 157,849,217 (-)RGD
cM Map1 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_035403 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAD17206 (Get FASTA)   NCBI Sequence Viewer  
  AAF03482 (Get FASTA)   NCBI Sequence Viewer  
  AAF03484 (Get FASTA)   NCBI Sequence Viewer  
  AAF03488 (Get FASTA)   NCBI Sequence Viewer  
  AAF13256 (Get FASTA)   NCBI Sequence Viewer  
  AAI53873 (Get FASTA)   NCBI Sequence Viewer  
  ADN93334 (Get FASTA)   NCBI Sequence Viewer  
  ADN93335 (Get FASTA)   NCBI Sequence Viewer  
  ADN93349 (Get FASTA)   NCBI Sequence Viewer  
  ADN93354 (Get FASTA)   NCBI Sequence Viewer  
  ADN93362 (Get FASTA)   NCBI Sequence Viewer  
  ADO85653 (Get FASTA)   NCBI Sequence Viewer  
  ADO85654 (Get FASTA)   NCBI Sequence Viewer  
  ADO85655 (Get FASTA)   NCBI Sequence Viewer  
  ADO85657 (Get FASTA)   NCBI Sequence Viewer  
  ADO85658 (Get FASTA)   NCBI Sequence Viewer  
  ADO85659 (Get FASTA)   NCBI Sequence Viewer  
  ADO85660 (Get FASTA)   NCBI Sequence Viewer  
  ADO85661 (Get FASTA)   NCBI Sequence Viewer  
  ADO85662 (Get FASTA)   NCBI Sequence Viewer  
  ADO85663 (Get FASTA)   NCBI Sequence Viewer  
  ADO85664 (Get FASTA)   NCBI Sequence Viewer  
  ADO85665 (Get FASTA)   NCBI Sequence Viewer  
  ADO85666 (Get FASTA)   NCBI Sequence Viewer  
  ADO85667 (Get FASTA)   NCBI Sequence Viewer  
  ADO85668 (Get FASTA)   NCBI Sequence Viewer  
  ADO85669 (Get FASTA)   NCBI Sequence Viewer  
  ADO85670 (Get FASTA)   NCBI Sequence Viewer  
  ADO85671 (Get FASTA)   NCBI Sequence Viewer  
  ADO85672 (Get FASTA)   NCBI Sequence Viewer  
  BAC27724 (Get FASTA)   NCBI Sequence Viewer  
  BAC28279 (Get FASTA)   NCBI Sequence Viewer  
  BAC28389 (Get FASTA)   NCBI Sequence Viewer  
  BAC33059 (Get FASTA)   NCBI Sequence Viewer  
  BAC34074 (Get FASTA)   NCBI Sequence Viewer  
  BAE24789 (Get FASTA)   NCBI Sequence Viewer  
  BAE27891 (Get FASTA)   NCBI Sequence Viewer  
  EDL39365 (Get FASTA)   NCBI Sequence Viewer  
  EDL39405 (Get FASTA)   NCBI Sequence Viewer  
  Q9R031 (Get FASTA)   NCBI Sequence Viewer  
  Q9Z0U0 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_035403   ⟸   NM_011273
- UniProtKB: Q9Z0U0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000027741   ⟸   ENSMUST00000027741
RefSeq Acc Id: ENSMUSP00000107404   ⟸   ENSMUST00000111774
RefSeq Acc Id: ENSMUSP00000107405   ⟸   ENSMUST00000111775
Protein Domains
EXS   SPX

Promoters
RGD ID:6875320
Promoter ID:EPDNEW_M1111
Type:initiation region
Name:Xpr1_1
Description:Mus musculus xenotropic and polytropic retrovirus receptor 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381155,417,403 - 155,417,463EPDNEW
RGD ID:6818720
Promoter ID:MM_KWN:2495
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:ENSMUST00000111775,   NM_011273,   OTTMUST00000053874,   UC007DBH.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361157,264,176 - 157,264,676 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97932 AgrOrtholog
Ensembl Genes ENSMUSG00000026469 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000027741 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000107404 UniProtKB/Swiss-Prot
  ENSMUSP00000107405 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000027741 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000111774 UniProtKB/Swiss-Prot
  ENSMUST00000111775 UniProtKB/TrEMBL
InterPro EXS_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:19775 UniProtKB/Swiss-Prot
MGD MGI:97932 ENTREZGENE
NCBI Gene 19775 ENTREZGENE
Pfam EXS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Xpr1 PhenoGen
PROSITE EXS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.266215 ENTREZGENE
UniProt D3Z2B4_MOUSE UniProtKB/TrEMBL
  E2J868_MOUSE UniProtKB/TrEMBL
  E3VX02_MOUSE UniProtKB/TrEMBL
  E3VX03_MOUSE UniProtKB/TrEMBL
  E3VX04_MOUSE UniProtKB/TrEMBL
  E3VX05_MOUSE UniProtKB/TrEMBL
  E3VX06_MOUSE UniProtKB/TrEMBL
  E3VX07_MOUSE UniProtKB/TrEMBL
  E3VX08_MOUSE UniProtKB/TrEMBL
  E3VX09_MOUSE UniProtKB/TrEMBL
  E3VX10_MOUSE UniProtKB/TrEMBL
  E3VX11_MOUSE UniProtKB/TrEMBL
  E3VX14_MOUSE UniProtKB/TrEMBL
  E3VX15_MOUSE UniProtKB/TrEMBL
  E3VX16_MOUSE UniProtKB/TrEMBL
  E3VX17_MOUSE UniProtKB/TrEMBL
  E3VX18_MOUSE UniProtKB/TrEMBL
  E3VX19_MOUSE UniProtKB/TrEMBL
  E3VX20_MOUSE UniProtKB/TrEMBL
  Q8BHF9_MOUSE UniProtKB/TrEMBL
  Q9R031 ENTREZGENE
  Q9Z0U0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3UHG6 UniProtKB/Swiss-Prot
  Q3UR99 UniProtKB/Swiss-Prot
  Q8CCC8 UniProtKB/Swiss-Prot
  Q8CCT2 UniProtKB/Swiss-Prot
  Q9QZ72 UniProtKB/Swiss-Prot
  Q9R034 UniProtKB/Swiss-Prot
  Q9R036 UniProtKB/Swiss-Prot