Kifap3 (kinesin-associated protein 3) - Rat Genome Database

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Gene: Kifap3 (kinesin-associated protein 3) Mus musculus
Analyze
Symbol: Kifap3
Name: kinesin-associated protein 3
RGD ID: 1313073
MGI Page MGI
Description: Enables intraciliary transport particle B binding activity. Involved in anterograde dendritic transport of neurotransmitter receptor complex. Acts upstream of or within several processes, including negative regulation of apoptotic process; negative regulation of neuroblast proliferation; and positive regulation of calcium-dependent cell-cell adhesion. Located in several cellular components, including cytoskeleton; periciliary membrane compartment; and photoreceptor cell cilium. Part of kinesin II complex. Is active in glutamatergic synapse and postsynapse. Is expressed in embryo mesenchyme; heart; nervous system; and sensory organ. Orthologous to human KIFAP3 (kinesin associated protein 3).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: KA; KAP-3; KAP3; SMAP; Smg GDS
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,589,711 - 163,744,676 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)EnsemblGRCm39 Ensembl
GRCm381163,762,138 - 163,917,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv371165,709,810 - 165,847,231 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,616,354 - 165,753,775 (+)NCBIMGSCv36mm8
Celera1166,219,175 - 166,357,571 (+)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map171.08NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifap3Mouse1q24 Deletion Syndrome  ISORGD:13130728554872ClinVar Annotator: match by term: 1q24q25 microdeletion syndromeClinVarPMID:25741868
Kifap3Mousegastrointestinal stromal tumor  ISORGD:13130728554872ClinVar Annotator: match by term: Gastrointestinal stromal tumorClinVarPMID:28492532
Kifap3Mouseparathyroid carcinoma  ISORGD:13130728554872ClinVar Annotator: match by term: Parathyroid carcinomaClinVarPMID:28492532

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifap3Mouse(-)-epigallocatechin 3-gallate multiple interactionsISORGD:13130726480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of KIFAP3 mRNACTDPMID:22079256
Kifap3Mouse1,2-dimethylhydrazine increases expressionEXP 64804641,2-Dimethylhydrazine results in increased expression of KIFAP3 mRNACTDPMID:22206623
Kifap3Mouse1,2-dimethylhydrazine multiple interactionsEXP 6480464[1,2-Dimethylhydrazine co-treated with Folic Acid] results in increased expression of KIFAP3 mRNACTDPMID:22206623
Kifap3Mouse2,2',5,5'-tetrachlorobiphenyl increases expressionISORGD:130519164804642,5,2',5'-tetrachlorobiphenyl results in increased expression of KIFAP3 mRNACTDPMID:23829299
Kifap3Mouse2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of KIFAP3 mRNACTDPMID:21570461|PMID:24680724
Kifap3Mouse2,3,7,8-tetrachlorodibenzodioxine decreases expressionISORGD:13051916480464Tetrachlorodibenzodioxin results in decreased expression of KIFAP3 mRNACTDPMID:33387578
Kifap3Mouse2,3,7,8-tetrachlorodibenzodioxine increases expressionISORGD:13051916480464Tetrachlorodibenzodioxin results in increased expression of KIFAP3 mRNACTDPMID:34747641
Kifap3Mouse2,4-dinitrotoluene affects expressionISORGD:130519164804642,4-dinitrotoluene affects the expression of KIFAP3 mRNACTDPMID:21346803
Kifap3Mouse4-amino-2,6-dinitrotoluene affects expressionISORGD:130519164804644-amino-2,6-dinitrotoluene affects the expression of KIFAP3 mRNACTDPMID:21346803
Kifap3Mouse5-aza-2'-deoxycytidine affects expressionISORGD:13130726480464Decitabine affects the expression of KIFAP3 mRNACTDPMID:23300844
Kifap3Mouse6-propyl-2-thiouracil increases expressionISORGD:13051916480464Propylthiouracil results in increased expression of KIFAP3 mRNACTDPMID:36843608
Kifap3Mouseaflatoxin B1 decreases methylationISORGD:13130726480464Aflatoxin B1 results in decreased methylation of KIFAP3 geneCTDPMID:27153756
Kifap3Mouseall-trans-retinoic acid increases expressionISORGD:13130726480464Tretinoin results in increased expression of KIFAP3 mRNACTDPMID:21934132
Kifap3Mouseall-trans-retinoic acid decreases expressionISORGD:13130726480464Tretinoin results in decreased expression of KIFAP3 mRNACTDPMID:33167477
Kifap3Mousearsane affects methylationISORGD:13130726480464Arsenic affects the methylation of KIFAP3 geneCTDPMID:25304211
Kifap3Mousearsenic atom affects methylationISORGD:13130726480464Arsenic affects the methylation of KIFAP3 geneCTDPMID:25304211
Kifap3Mousearsenite(3-) increases expressionEXP 6480464arsenite results in increased expression of KIFAP3 proteinCTDPMID:37955338
Kifap3Mouseauramine O increases expressionISORGD:13130726480464Benzophenoneidum results in increased expression of KIFAP3 proteinCTDPMID:28722353
Kifap3Mousebenzo[a]pyrene decreases expressionEXP 6480464Benzo(a)pyrene results in decreased expression of KIFAP3 mRNACTDPMID:19770486
Kifap3Mousebeta-lapachone increases expressionISORGD:13130726480464beta-lapachone results in increased expression of KIFAP3 mRNACTDPMID:38218311

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Biological Process
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Object Symbol
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Original Reference(s)
Kifap3Mouseanterograde dendritic transport of neurotransmitter receptor complex involved_inIMP 2290270 PMID:31746486SynGOPMID:31746486
Kifap3Mouseanterograde dendritic transport of neurotransmitter receptor complex involved_inIDA 2290270 PMID:31746486SynGOPMID:31746486
Kifap3Mouseapoptotic process acts_upstream_ofIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
Kifap3Mousecardiac muscle cell apoptotic process acts_upstream_ofIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
Kifap3Mousecell population proliferation acts_upstream_ofIMPMGI:3043822|MGI:3579409|MGI:35794102290270 PMID:15834408MGIPMID:15834408
Kifap3Mousecilium organization involved_inIBAPANTHER:PTN000401088|FB:FBgn0028421|WB:WBGene00002182|UniProtKB:Q5G8B92290270 GO_CentralGO_REF:0000033
Kifap3Mousemicrotubule-based movement involved_inIBAPANTHER:PTN000401088|FB:FBgn0028421|MGI:107566|WB:WBGene000021822290270 GO_CentralGO_REF:0000033
Kifap3Mousemicrotubule-based process involved_inIPIUniProtKB:P28741|UniProtKB:Q617712290270 PMID:8710890UniProtPMID:8710890
Kifap3Mousenegative regulation of apoptotic process acts_upstream_of_or_withinIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
Kifap3Mousenegative regulation of cardiac muscle cell apoptotic process acts_upstream_of_or_withinIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
Kifap3Mousenegative regulation of neuroblast proliferation acts_upstream_of_or_withinIMPMGI:3043822,MGI:3579409,MGI:35794102290270 PMID:15834408MGIPMID:15834408
Kifap3Mousenegative regulation of thymocyte apoptotic process acts_upstream_of_or_withinIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
Kifap3Mouseneuroblast proliferation acts_upstream_ofIMPMGI:3043822,MGI:3579409,MGI:35794102290270 PMID:15834408MGIPMID:15834408
Kifap3Mousepositive regulation of calcium-dependent cell-cell adhesion acts_upstream_of_or_withinIMPMGI:35794102290270 PMID:15834408MGIPMID:15834408
Kifap3Mouseprotein localization acts_upstream_of_or_withinIMPMGI:3043822|MGI:3579409|MGI:35794102290270 PMID:15834408MGIPMID:15834408
Kifap3Mousethymocyte apoptotic process acts_upstream_ofIMPMGI:36135722290270 PMID:10793158MGIPMID:10793158
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Cellular Component
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Object Symbol
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Reference
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Original Reference(s)
Kifap3Mouseaxoneme is_active_inIBAPANTHER:PTN000401088|WB:WBGene00002182|MGI:1075662290270 GO_CentralGO_REF:0000033
Kifap3Mouseaxoneme located_inIDA 2290270 PMID:19384852MGIPMID:19384852
Kifap3Mousecentrosome located_inIEAUniProtKB:Q92845|ensembl:ENSP000003545602290270 EnsemblGO_REF:0000107
Kifap3Mousecentrosome located_inISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119
Kifap3Mouseciliary basal body located_inIDA 2290270 PMID:19384852MGIPMID:19384852
Kifap3Mouseciliary transition zone is_active_inIBAPANTHER:PTN000401088|WB:WBGene00002182|MGI:1075662290270 GO_CentralGO_REF:0000033
Kifap3Mousecondensed nuclear chromosome located_inISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119
Kifap3Mousecondensed nuclear chromosome located_inIEAUniProtKB:Q92845|ensembl:ENSP000003545602290270 EnsemblGO_REF:0000107
Kifap3Mousecytosol located_inTAS 2290270 ReactomeReactome:R-MMU-2316350|Reactome:R-MMU-984713
Kifap3Mousedendrite cytoplasm located_inIEAGO:00989712290270 GOCGO_REF:0000108
Kifap3Mouseendoplasmic reticulum located_inIDA 2290270 PMID:19384852MGIPMID:19384852
Kifap3Mouseglutamatergic synapse is_active_inIMP 2290270 PMID:31746486SynGOPMID:31746486
Kifap3Mouseglutamatergic synapse is_active_inIDA 2290270 PMID:31746486SynGOPMID:31746486
Kifap3MouseGolgi apparatus located_inIDA 2290270 PMID:19384852MGIPMID:19384852
Kifap3Mousekinesin II complex part_ofIDA 2290270 PMID:19384852MGIPMID:19384852
Kifap3Mousekinesin II complex part_ofIPIUniProtKB:P28741|UniProtKB:Q617712290270 PMID:8710890UniProtPMID:8710890
Kifap3Mousekinesin II complex part_ofISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119
Kifap3Mousekinesin II complex part_ofIBAPANTHER:PTN000401088|MGI:107566|UniProtKB:Q26626|UniProtKB:Q928452290270 GO_CentralGO_REF:0000033
Kifap3Mousemicrotubule cytoskeleton located_inISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119
Kifap3Mousemicrotubule cytoskeleton located_inIDA 2290270 PMID:19384852MGIPMID:19384852
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Molecular Function

  
Object Symbol
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Term
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Evidence
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Reference
Notes
Source
Original Reference(s)
Kifap3Mouseintraciliary transport particle B binding enablesIDA 2290270 PMID:12821668MGIPMID:12821668
Kifap3Mousekinesin binding enablesISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119
Kifap3Mousekinesin binding enablesIEAUniProtKB:Q92845|ensembl:ENSP000003545602290270 EnsemblGO_REF:0000107
Kifap3Mouseprotein binding enablesIPIPR:P15116|PR:P30999|PR:Q02248|PR:Q617712290270 PMID:15834408MGIPMID:15834408
Kifap3Mouseprotein binding enablesIPIUniProtKB:P287412290270 PMID:17825299, PMID:19940036, PMID:22632975IntActPMID:17825299|PMID:19940036|PMID:22632975
Kifap3Mouseprotein binding enablesIPIPR:Q99PW82290270 PMID:19384852MGIPMID:19384852
Kifap3Mouseprotein phosphatase binding enablesIEAUniProtKB:Q92845|ensembl:ENSP000003545602290270 EnsemblGO_REF:0000107
Kifap3Mouseprotein phosphatase binding enablesISOUniProtKB:Q928452290270 GO_CentralGO_REF:0000119

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Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Kifap3Mouseabnormal brain morphology  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseabnormal cerebral cortex morphology  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseabnormal embryonic neuroepithelial layer differentiation  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseabnormal forebrain morphology  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseabnormal spinal cord morphology  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseimpaired glucose tolerance  IEA 5509061 MGI 
Kifap3Mouseincreased brain size  IAGP 5509061 MGIPMID:15834408
Kifap3Mouseneonatal lethality, complete penetrance  IAGP 5509061 MGIPMID:15834408
Kifap3Mousepreweaning lethality, complete penetrance  IEA 5509061 MGI 
1 to 9 of 9 rows

#
Reference Title
Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. Mouse MP Annotation Import Pipeline RGD automated import pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
PMID:8710890   PMID:8889548   PMID:10349636   PMID:10793158   PMID:10922068   PMID:10964600   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12520002   PMID:12821668   PMID:14610273  
PMID:15489334   PMID:15782199   PMID:15834408   PMID:16141072   PMID:16141073   PMID:16298999   PMID:16602821   PMID:17825299   PMID:19088126   PMID:19384852   PMID:19940036   PMID:21267068  
PMID:21677750   PMID:21873635   PMID:22632975   PMID:23640485   PMID:23750925   PMID:23954693   PMID:30973865   PMID:31461655   PMID:31746486   PMID:32492419   PMID:34092116   PMID:34133714  
PMID:34321999   PMID:36265442   PMID:38187761   PMID:38355793  



Kifap3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391163,589,711 - 163,744,676 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)EnsemblGRCm39 Ensembl
GRCm381163,762,138 - 163,917,107 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)EnsemblGRCm38mm10GRCm38
MGSCv371165,709,810 - 165,847,231 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361165,616,354 - 165,753,775 (+)NCBIMGSCv36mm8
Celera1166,219,175 - 166,357,571 (+)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map171.08NCBI
KIFAP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381169,921,329 - 170,085,184 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1169,921,326 - 170,085,208 (-)EnsemblGRCh38hg38GRCh38
GRCh371169,890,470 - 170,043,836 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361168,157,094 - 168,310,503 (-)NCBINCBI36Build 36hg18NCBI36
Build 341166,622,127 - 166,775,537NCBI
Celera1143,000,253 - 143,153,688 (-)NCBICelera
Cytogenetic Map1q24.2NCBI
HuRef1141,112,974 - 141,266,563 (-)NCBIHuRef
CHM1_11171,312,642 - 171,466,210 (-)NCBICHM1_1
T2T-CHM13v2.01169,277,046 - 169,441,099 (-)NCBIT2T-CHM13v2.0
Kifap3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81378,660,849 - 78,797,821 (+)NCBIGRCr8
mRatBN7.21376,127,702 - 76,264,654 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1376,127,696 - 76,264,650 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1378,756,196 - 78,882,717 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01380,065,273 - 80,187,049 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01377,319,837 - 77,441,633 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01382,072,497 - 82,217,256 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1382,072,497 - 82,217,252 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01386,953,053 - 87,089,644 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41379,544,010 - 79,673,768 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11379,558,313 - 79,686,817 (+)NCBI
Celera1375,872,613 - 75,998,359 (+)NCBICelera
Cytogenetic Map13q22NCBI
KIFAP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2179,677,007 - 79,841,101 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1179,349,883 - 79,513,734 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01145,410,755 - 145,564,248 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11149,127,544 - 149,280,831 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1149,127,548 - 149,280,831 (-)Ensemblpanpan1.1panPan2
KIFAP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1728,581,855 - 28,739,327 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl728,593,425 - 28,739,272 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha728,113,580 - 28,271,198 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0728,383,601 - 28,541,435 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl728,395,164 - 28,542,155 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1728,232,563 - 28,390,147 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0728,267,598 - 28,425,374 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0728,504,316 - 28,661,873 (+)NCBIUU_Cfam_GSD_1.0
Kifap3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934498,789,040 - 98,930,697 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648116,663,974 - 16,779,428 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648116,664,025 - 16,777,440 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
KIFAP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl480,921,682 - 81,108,360 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1480,922,032 - 81,105,135 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2488,552,950 - 88,734,332 (+)NCBISscrofa10.2Sscrofa10.2susScr3
KIFAP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12558,983,180 - 59,130,431 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2558,983,207 - 59,130,074 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605560,638,540 - 60,786,174 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Kifap3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480510,416,095 - 10,504,234 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480510,381,217 - 10,521,349 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Kifap3
7071 total Variants

Predicted Target Of
Summary Value
Count of predictions:754
Count of miRNA genes:293
Interacting mature miRNAs:327
Transcripts:ENSMUST00000027877, ENSMUST00000077642
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
12790987Tgl5_mtriglyceride 5 (mouse)1160097157194097157Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
12790988Phdlc5_mplasma HDL cholesterol 5 (mouse)9160097157194097157Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse

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1 to 18 of 18 rows
RefSeq Transcripts NM_001305643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496679 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006496681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC102444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC163899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133957 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040362 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049100 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BU701040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D50366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D50367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 18 of 18 rows

Ensembl Acc Id: ENSMUST00000027877   ⟹   ENSMUSP00000027877
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)Ensembl
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)Ensembl
Ensembl Acc Id: ENSMUST00000077642   ⟹   ENSMUSP00000076830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1163,607,152 - 163,744,678 (+)Ensembl
GRCm38.p6 Ensembl1163,779,583 - 163,917,109 (+)Ensembl
RefSeq Acc Id: NM_001305643   ⟹   NP_001292572
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,607,152 - 163,744,676 (+)NCBI
GRCm381163,779,583 - 163,917,107 (+)NCBI
Sequence:
RefSeq Acc Id: NM_010629   ⟹   NP_034759
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,607,152 - 163,744,676 (+)NCBI
GRCm381163,779,583 - 163,917,107 (+)NCBI
MGSCv371165,709,810 - 165,847,231 (+)RGD
Celera1166,219,175 - 166,357,571 (+)RGD
cM Map1 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006496679   ⟹   XP_006496742
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,589,712 - 163,744,673 (+)NCBI
GRCm381163,762,139 - 163,917,104 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006496681   ⟹   XP_006496744
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391163,589,711 - 163,744,673 (+)NCBI
GRCm381163,762,138 - 163,917,104 (+)NCBI
Sequence:
RefSeq Acc Id: NP_034759   ⟸   NM_010629
- Peptide Label: isoform KAP3B
- UniProtKB: Q3UZA5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496744   ⟸   XM_006496681
- Peptide Label: isoform X2
- UniProtKB: Q3UZA5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006496742   ⟸   XM_006496679
- Peptide Label: isoform X1
- UniProtKB: Q3UZA5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001292572   ⟸   NM_001305643
- Peptide Label: isoform KAP3A
- UniProtKB: P70189 (UniProtKB/Swiss-Prot),   Q6GTS3 (UniProtKB/Swiss-Prot),   P70188 (UniProtKB/Swiss-Prot),   Q3UZA5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000027877   ⟸   ENSMUST00000027877

Name Modeler Protein Id AA Range Protein Structure
AF-P70188-F1-model_v2 AlphaFold P70188 1-793 view protein structure

RGD ID:6875494
Promoter ID:EPDNEW_M1197
Type:initiation region
Name:Kifap3_1
Description:Mus musculus kinesin-associated protein 3 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381163,779,646 - 163,779,706EPDNEW
RGD ID:6817982
Promoter ID:MM_KWN:2668
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Lung
Transcripts:OTTMUST00000044067,   OTTMUST00000044068
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361165,709,541 - 165,710,041 (+)MPROMDB


1 to 28 of 28 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000026585 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000027877 ENTREZGENE
  ENSMUST00000027877.7 UniProtKB/Swiss-Prot
  ENSMUST00000077642 ENTREZGENE
  ENSMUST00000077642.12 UniProtKB/Swiss-Prot
Gene3D-CATH 1.25.10.10 UniProtKB/Swiss-Prot
InterPro ARM-like UniProtKB/Swiss-Prot
  ARM-type_fold UniProtKB/Swiss-Prot
  Armadillo UniProtKB/Swiss-Prot
  KAP3 UniProtKB/Swiss-Prot
KEGG Report mmu:16579 UniProtKB/Swiss-Prot
MGD MGI:107566 ENTREZGENE
NCBI Gene 16579 ENTREZGENE
PANTHER KINESIN-ASSOCIATED PROTEIN 3 UniProtKB/Swiss-Prot
  PTHR15605 UniProtKB/Swiss-Prot
Pfam KAP UniProtKB/Swiss-Prot
PhenoGen Kifap3 PhenoGen
PROSITE ARM_REPEAT UniProtKB/Swiss-Prot
SMART ARM UniProtKB/Swiss-Prot
  KAP UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48371 UniProtKB/Swiss-Prot
UniProt KIFA3_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  P70189 ENTREZGENE
  Q3UZA5 ENTREZGENE, UniProtKB/TrEMBL
  Q6GTS3 ENTREZGENE
  Q9CRX5_MOUSE UniProtKB/TrEMBL
UniProt Secondary P70189 UniProtKB/Swiss-Prot
  Q6GTS3 UniProtKB/Swiss-Prot
1 to 28 of 28 rows