Gm24719 (predicted gene, 24719) - Rat Genome Database

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Gene: Gm24719 (predicted gene, 24719) Mus musculus
Analyze
Symbol: Gm24719
Name: predicted gene, 24719
RGD ID: 15002583
MGI Page MGI
Description:
Type: pseudo (Ensembl: snoRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,811,066 - 159,811,175 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1159,811,066 - 159,811,175 (-)EnsemblGRCm39 Ensembl
GRCm381159,983,496 - 159,983,605 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,983,496 - 159,983,605 (-)EnsemblGRCm38mm10GRCm38
Cytogenetic Map1H1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm24719
4 total Variants

Predicted Target Of
Summary Value
Count of predictions:165
Count of miRNA genes:156
Interacting mature miRNAs:163
Transcripts:ENSMUST00000157520
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 104 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1301523Ccrs1_mcorpus callosum hemisphere surface size 1 (mouse)Not determined1139602037173602216Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195527725162027569Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163854690189303617Mouse
13824984Twq5_mtestis weight QTL 5 (mouse)13069992184732197Mouse
12790984Pcho7_mplasma cholesterol 7 (mouse)1147219390181219390Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121727729164827569Mouse
1300740Tne1_mtotal number errors (mouse)Not determined1139602037173602216Mouse
12790996Aath2_maortic arch atherosclerosis 2 (mouse)1145077630179077630Mouse
12791001Aath6_maortic arch atherosclerosis 6 (mouse)1147219390181219390Mouse
1300745Gvhd1_mgraft-versus-host disease 1 (mouse)Not determined1157456299191456436Mouse

1 to 10 of 104 rows





GenBank Nucleotide AC093336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000157520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1159,811,066 - 159,811,175 (-)Ensembl
GRCm38.p6 Ensembl1159,983,496 - 159,983,605 (-)Ensembl


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000088145 Ensembl, ENTREZGENE
MGD MGI:5454496 ENTREZGENE
NCBI Gene Gm24719 ENTREZGENE
PhenoGen Gm24719 PhenoGen
RNAcentral URS00006A241D RNACentral