Gluco34 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Gluco34 (Glucose level QTL 34) Rattus norvegicus

Symbol: Gluco34
Name: Glucose level QTL 34
RGD ID: 2290375
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level area under curve (AUC)   (CMO:0000350)    
LOD Score: 2.75
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X20,990,947 - 41,203,591RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0X21,592,623 - 44,468,300RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0X21,859,080 - 44,765,347RGDRnor5.0
RGSC_v3.4X41,386,788 - 62,894,306RGDRGSC3.4
RGSC_v3.1X41,440,348 - 62,947,775RGD
Cross Type: intercross
Strains Crossed: CDR/Ygl CDS/Ygl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
CDR/Ygl  (IEA)
CDS/Ygl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. GENDER-SPECIFIC GENETIC DISSECTION OF DIABETES IN A RODENT MODEL IDENTIFIES ICA1 AND NDUFA4 AS MAJOR CANDIDATE GENES. Barkalifa R, etal., Physiol Genomics. 2010 Jun 8.
2. Metabolic and genomic dissection of diabetes in the Cohen rat. Yagil C, etal., Physiol Genomics. 2007 Apr 24;29(2):181-92. Epub 2007 Jan 9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1561763Huwe1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1X2087379521001378Rat
69231Hsd17b10hydroxysteroid (17-beta) dehydrogenase 10X2108914221091603Rat
1359621Ribc1RIB43A domain with coiled-coils 1X2109171721103688Rat
61991Smc1astructural maintenance of chromosomes 1AX2110332321148053Rat
1596452Iqsec2IQ motif and Sec7 domain ArfGEF 2X2125479921337179Rat
1560601Kdm5clysine demethylase 5CX2134545921387045Rat
10045415KantrKANTR integral membrane proteinX2140271721430663Rat
1563283Tspyl2TSPY-like 2X2143947821445208Rat
620748Gpr173G-protein coupled receptor 173X2144626121471119Rat
41187622LOC120099523U2 spliceosomal RNAX2153152621531690Rat
1594343Cldn34aclaudin 34AX2171710121737363Rat
1591324Rab7a-ps1RAB7A, member RAS oncogene family, pseudogene 1X2173840421739267Rat
1591314Samt2l3spermatogenesis associated multipass transmembrane protein 2 like 3X2179846021803412Rat
1565163Shroom2shroom family member 2X2181246921983724Rat
1565799Gpr143G protein-coupled receptor 143X2200291422027720Rat
1590221Samt2l2spermatogenesis associated multipass transmembrane protein 2 like 2X2237669022379601Rat
2318768LOC100362115rCG64250-likeX2239827922416392Rat
1590206Samt2l1spermatogenesis associated multipass transmembrane protein 2 like 1X2243426822437212Rat
2318689LOC100362195hypothetical LOC100362195X2245746622459565Rat
2323576LOC100363019hypothetical LOC100363019X2248170322484017Rat
2318536LOC100362249hypothetical LOC100362249X2250721022615725Rat
1590194Samt4spermatogenesis associated multipass transmembrane protein 4X2267683022679573Rat
41009085Ung-ps2uracil-DNA glycosylase, pseudogene 2X2269880222701214Rat
6488542LOC100912112uncharacterized LOC100912112X2273391522792736Rat
2318494LOC100362291hypothetical LOC100362291X2281490022832595Rat
1590179Samt1spermatogenesis associated multipass transmembrane protein 1X2286630222922946Rat
1589079LOC685806hypothetical protein LOC685806X2292055422922861Rat
6490096LOC100911869uncharacterized LOC100911869X2295465822956370Rat
2318145LOC100362443hypothetical LOC100362443X2299680822999724Rat
7584297LOC102547980uncharacterized LOC102547980X2311536923263595Rat
41051933LOC120099309uncharacterized LOC120099309X2319634123206647Rat
1589067Samt2spermatogenesis associated multipass transmembrane protein 2X2335521123407134Rat
1560666Wwc3WWC family member 3X2358420423701864Rat
708381Clcn4chloride voltage-gated channel 4X2372919423795391Rat
41054391LOC120099331uncharacterized LOC120099331X2390174423907066Rat
2640Mid1midline 1X2411667424491205Rat
1563947Capza1-ps1capping actin protein of muscle Z-line subunit alpha 1, pseudogene 1X2439269824393561Rat
1563855Hccsholocytochrome c synthaseX2493294324942376Rat
2323364Arhgap6Rho GTPase activating protein 6X2495346425490003Rat
2107Amelxamelogenin, X-linkedX2507636225087660Rat
41049220LOC120099231uncharacterized LOC120099231X2522941225235214Rat
41052752LOC120099222uncharacterized LOC120099222X2549829725550238Rat
1549763Msl3MSL complex subunit 3X2563802925655698Rat
1566031Frmpd4FERM and PDZ domain containing 4X2585384926814642Rat
11365896LOC10834912240S ribosomal protein S2 pseudogeneX2604760626048521Rat
1586601Fancd2osl2FANCD2 opposite strand like 2X2684816026849412Rat
1586665Fancd2osl1FANCD2 opposite strand like 1X2688623026886772Rat
1586654LOC686042hypothetical protein LOC686042X2691117326912427Rat
41067677LOC120099553U6 spliceosomal RNAX2693745326937559Rat
3415Prps2phosphoribosyl pyrophosphate synthetase 2X2697591527013184Rat
41131627LOC120099444small nucleolar RNA SNORA70X2699445626994573Rat
1563357Tlr7toll-like receptor 7X2702738027054309Rat
1590327Tlr8toll-like receptor 8X2709178027116092Rat
7548499Ybx1-ps7Y box binding protein 1, pseudogene 7X2709677427098223Rat
621622Tmsb4xthymosin beta 4, X-linkedX2714466627146667Rat
41302239LOC120099363uncharacterized LOC120099363X2718512627188537Rat
7702167LOC102549869uncharacterized LOC102549869X2724569627256791Rat
9121813LOC103690816uncharacterized LOC103690816X2747900227509040Rat
41102630LOC120099236uncharacterized LOC120099236X2751763627528765Rat
41143785LOC120099210uncharacterized LOC120099210X2755532427586665Rat
9431367Tomm7l1translocase of outer mitochondrial membrane 7 like 1X2761779327617954Rat
7693716LOC102551617uncharacterized LOC102551617X2769974327721850Rat
40952579LOC120099496small nucleolar RNA SNORA17X2775720727757338Rat
1563321Egfl6EGF-like-domain, multiple 6X2788408727942044Rat
1584894Tceanctranscription elongation factor A N-terminal and central domain containingX2795253927961038Rat
619740Rab9aRAB9A, member RAS oncogene familyX2795555228009870Rat
1549779Saxol1stabilizer of axonemal microtubules like 1X2797344227975599Rat
1306925Trappc2trafficking protein particle complex subunit 2X2800405128015336Rat
1562231Ofd1Ofd1 centriole and centriolar satellite proteinX2801534728056115Rat
620580Gpm6bglycoprotein m6bX2805778828204409Rat
1359160Gemin8gem (nuclear organelle) associated protein 8X2825980628278641Rat
2705Glra2glycine receptor, alpha 2X2902037729241666Rat
1587659Ndufaf4-ps5NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 5X2929435029295183Rat
1587653Rnps1l1RNA binding protein with serine rich domain 1 like 1X2933300129334044Rat
1561555FancbFA complementation group BX2940377129420484Rat
1563952Mospd2motile sperm domain containing 2X2942048529472099Rat
1586172Thrap3-ps1thyroid hormone receptor associated protein 3, pseudogene 1X2960229929606023Rat
41158036LOC120099531U2 spliceosomal RNAX2979820529798305Rat
41085143LOC120099537U2 spliceosomal RNAX2991182529911940Rat
1560537Asb9ankyrin repeat and SOCS box-containing 9X2995657630001436Rat
1566298Asb11ankyrin repeat and SOCS box containing 11X3001448530037808Rat
1589723Pigaphosphatidylinositol glycan anchor biosynthesis, class AX3004303330055861Rat
620695Vegfdvascular endothelial growth factor DX3007312230108413Rat
11516539LOC108349213ubiquitin-conjugating enzyme E2 K pseudogeneX3010149230104194Rat
1359212PirpirinX3010853630219269Rat
41137287LOC120099485small nucleolar RNA SNORA17X3019721530197346Rat
41366930LOC120099472small nucleolar RNA SNORA48X3020156930201711Rat
40935967LOC120099428U6 spliceosomal RNAX3022062630220729Rat
1565643BmxBMX non-receptor tyrosine kinaseX3022725130290015Rat
41222808Coa5-ps1cytochrome c oxidase assembly factor 5, pseudogene 1X3026459030264870Rat
728890Ace2angiotensin converting enzyme 2X3029359730340961Rat
708489Cltrncollectrin, amino acid transport regulatorX3036196730395264Rat
7725282LOC102555398uncharacterized LOC102555398X3040859030418105Rat
11403223LOC108349165uncharacterized LOC108349165X3043553830438869Rat
1584893Appbp2-ps1amyloid beta precursor protein binding protein 2, pseudogene 1X3045542630456728Rat
41213017Pin4-ps2peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 2X3046987730470478Rat
40959218LOC120099556U6 spliceosomal RNAX3047037530470481Rat
1549783Car5bcarbonic anhydrase 5BX3047469730534797Rat
1559763Zrsr2zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2X3054742430571613Rat
1561862Ap1s2adaptor related protein complex 1 subunit sigma 2X3057274630598961Rat
41336450LOC120099291uncharacterized LOC120099291X3061492730619808Rat
41050340LOC120099257uncharacterized LOC120099257X3063732630651476Rat
1565844Rnf138l1ring finger protein 138 like 1X3073954130740614Rat
41118356LOC120099247uncharacterized LOC120099247X3087914530889914Rat
9377282LOC103690819uncharacterized LOC103690819X3088829530901341Rat
2750Grprgastrin releasing peptide receptorX3099842531038442Rat
41102764LOC120099526U6atac minor spliceosomal RNAX3118111031181231Rat
2318493Rps6-ps2ribosomal protein S6, pseudogene 2X3123999231250266Rat
1559892Rpl29-ps15ribosomal protein L29, pseudogene 15X3130527431305814Rat
41327648LOC120099467small nucleolar RNA SNORA48X3142782931427972Rat
9393063LOC103694478ubiquitin-conjugating enzyme E2 variant 1 pseudogeneX3155779631558623Rat
1585274Dnd1-ps1DND microRNA-mediated repression inhibitor 1, pseudogene 1X3159048131592597Rat
1564836Hmga1l1high mobility group AT-hook 1 like 1X3161186531612339Rat
9420291LOC103690820interferon-stimulated 20 kDa exonuclease-like 2 pseudogeneX3163635231639295Rat
1563369Ctps2CTP synthase 2X3164587331786733Rat
41101669Ccdc43-ps1coiled-coil domain containing 43, pseudogene 1X3165354331661046Rat
2253S100gS100 calcium binding protein GX3170585331708422Rat
2319751Odc1-ps2ornithine decarboxylase 1, pseudogene 2X3175470331759100Rat
1303113Syap1synapse associated protein 1X3179218031826672Rat
40960339LOC120099424U6 spliceosomal RNAX3183434031834443Rat
2318297Hnrnpd-ps1heterogeneous nuclear ribonucleoprotein D, pseudogene 1X3184269131846693Rat
1564371Txlngtaxilin gammaX3186411131912931Rat
620125Rbbp7RB binding protein 7, chromatin remodeling factorX3191308031931245Rat
41148929LOC120099521small nucleolar RNA SNORA76X3194358031943706Rat
1584113Psmb6-ps2proteasome 20S subunit beta 6, pseudogene 2X3194633231950104Rat
7525252LOC102550331uncharacterized LOC102550331X3196133531972160Rat
9350894Rpl31-ps12ribosomal protein L31, pseudogene 12X3198418331984508Rat
1584087Slc25a39-ps5solute carrier family 25 member 39, pseudogene 5X3199892831999923Rat
1561642Reps2RALBP1 associated Eps domain containing 2X3204945532322317Rat
11377812LOC108349215gamma-aminobutyric acid receptor-associated protein-like 2 pseudogeneX3209063932092195Rat
1560203RGD1560203similar to ferritin heavy polypeptide-like 17X3240266232403192Rat
1582975Hspa8-ps23heat shock protein family A (Hsp70) member 8, pseudogene 23X3253516732537203Rat
1561818NhsNHS actin remodeling regulatorX3255330032892961Rat
40968342LOC120099408U6 spliceosomal RNAX3260265632602756Rat
7723901Scml1Scm polycomb group protein like 1X3289310032912686Rat
1566197Phb1l1prohibitin 1 like 1X3293074632931910Rat
1560139Rai2retinoic acid induced 2X3294865633011222Rat
41287312Bend2BEN domain containing 2X3340112233465427Rat
1564289Scml2Scm polycomb group protein like 2X3352317933677672Rat
2324133Cdkl5cyclin-dependent kinase-like 5X3375760533988075Rat
2693Gja6gap junction protein, alpha 6X3384068933845585Rat
1642515Rs1retinoschisin 1X3396244033992203Rat
41264517Trnav-uactransfer RNA valine (anticodon UAC)X3399427033994342Rat
1562772Ppef1protein phosphatase with EF-hand domain 1X3399450334151704Rat
2324089Mt1fmetallothionein 1FX3399819534006095Rat
1596945Phka2phosphorylase kinase regulatory subunit alpha 2X3417095934293498Rat
628618Adgrg2adhesion G protein-coupled receptor G2X3429740234422590Rat
9332997LOC10369082460S ribosomal protein L15 pseudogeneX3435510534355753Rat
1560997Rps27a-ps5ribosomal protein S27a, pseudogene 5X3439398334394450Rat
40946677Smim30small integral membrane protein 30X3444318034443365Rat
1594258Cct6a-ps17chaperonin containing TCP1 subunit 6A, pseudogene 17X3446057534462237Rat
6499893Wdr76-ps1WD repeat domain 76, pseudogene 1X3452949834532433Rat
2319924Lamtor1l1late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 like 1X3463746034638509Rat
41157543LOC120099465small nucleolar RNA SNORA55X3465568034655817Rat
3286Pdha1pyruvate dehydrogenase E1 subunit alpha 1X3470048134714309Rat
1560603Map3k15mitogen-activated protein kinase kinase kinase 15X3471315034859054Rat
7650146Ubl4a-ps1ubiquitin-like 4A, pseudogeneX3482380834824371Rat
620904Sh3kbp1SH3 domain-containing kinase-binding protein 1X3487786235223013Rat
1562161Bclaf3BCLAF1 and THRAP3 family member 3X3525722835328883Rat
2320481Rps9-ps13ribosomal protein S9, pseudogene 13X3534669435347479Rat
1564852Map7d2MAP7 domain containing 2X3537245335488073Rat
1560198Eif1axeukaryotic translation initiation factor 1A, X-linkedX3549869835513402Rat
1563860Rps6ka3ribosomal protein S6 kinase A3X3551730635623296Rat
11371832LOC10834921940S ribosomal protein S6 pseudogeneX3580460235805359Rat
9434873LOC103690826uncharacterized LOC103690826X3598553135987025Rat
1563991Taf5l2TATA-box binding protein associated factor 5 like 2X3602237436024170Rat
1584769Rpsa-ps21ribosomal protein SA, pseudogene 21X3607994636080809Rat
2320115Acta1-ps3actin, alpha 1, skeletal muscle, pseudogene 3X3618110736182061Rat
1590739Psmb3-ps6proteasome 20S subunit beta 3, pseudogene 6X3638919936389797Rat
41047098LOC120099533U2 spliceosomal RNAX3652130736521494Rat
41062366LOC120099494small nucleolar RNA SNORA17X3657691436577060Rat
1583667Nme1-ps1NME/NM23 nucleoside diphosphate kinase 1, pseudogene 1X3661434336618881Rat
708454Cnksr2connector enhancer of kinase suppressor of Ras 2X3690813537148337Rat
1560439Klhl34kelch-like family member 34X3715129837154053Rat
41032942LOC120099482small nucleolar RNA SNORA48X3722483937224981Rat
69233Smpxsmall muscle protein, X-linkedX3723320937292266Rat
2319767Ebag9-ps2estrogen receptor binding site associated, antigen, 9, pseudogene 2X3732464637325272Rat
1566171Mbtps2membrane-bound transcription factor peptidase, site 2X3741091437461130Rat
2324567Yy2YY2 transcription factorX3743842537442047Rat
1564826Smsspermine synthaseX3751694937572657Rat
41286795LOC120099497small nucleolar RNA SNORA17X3758568037585810Rat
3323Phexphosphate regulating endopeptidase X-linkedX3760755337856183Rat
9362363LOC103694483fructose-bisphosphate aldolase A pseudogeneX3764337337653414Rat
41062743LOC120099546small nucleolar RNA U3X3770648537706565Rat
41034437LOC120099492small nucleolar RNA SNORA17X3772474937724880Rat
40977563LOC120099536U2 spliceosomal RNAX3829950538299577Rat
41215506LOC120099461small nucleolar RNA SNORA43X3840784838407978Rat
1562090Gemin8-ps2gem (nuclear organelle) associated protein 8, pseudogene 2X3860454538605592Rat
2319146Ndufb4l4NADH:ubiquinone oxidoreductase subunit B4 like 4X3944647239446921Rat
1594528Clint1-ps1clathrin interactor 1, pseudogene 1X3955360839555650Rat
41091115Golga7-ps1golgin A7, pseudogene 1X3955541539558800Rat
1564527Ptchd1patched domain containing 1X3968191039733416Rat
1565778Magea8MAGE family member A8X3985866239866791Rat
620043Prdx4peroxiredoxin 4X4002676240044066Rat
7505527LOC102557137E3 ubiquitin-protein ligase RNF168-likeX4006587340067029Rat
1359188Acot9acyl-CoA thioesterase 9X4007319740123573Rat
9227212LOC10369448560S ribosomal protein L7 pseudogeneX4014691540147879Rat
1586174Sat1spermidine/spermine N1-acetyl transferase 1X4015835440161641Rat
6490802Rplp0-ps13ribosomal protein lateral stalk subunit P0, pseudogene 13X4019707040197665Rat
1583773Sqstm1-ps1sequestosome 1, pseudogene 1X4025542340256647Rat
41267608LOC120099510small nucleolar RNA SNORA17X4026355240263677Rat
1595434Cldn34b3claudin 34B3X4027674540281540Rat
41266876Magea10-ps4MAGE family member A10, pseudogene 4X4028542240298988Rat
1566060Magea10-ps5MAGE family member A10, pseudogene 5X4036348140374806Rat
1586173Thumpd3-ps1THUMP domain containing 3, pseudogene 1X4040362440405172Rat
2318711Cldn34b4claudin 34B4X4045034940483399Rat
1592987Cldn34bclaudin 34BX4051749440523518Rat
1560334Myl6bmyosin light chain 6BX4057201240572991Rat
1592959Cldn34dclaudin 34DX4059466640603146Rat
1549733Lpgat1l1lysophosphatidylglycerol acyltransferase 1 like 1X4060563340606470Rat
7558343LOC102556957uncharacterized LOC102556957X4063219640637374Rat
41334296Ubxn2a-ps2UBX domain protein 2A, pseudogene 2X4065047840652519Rat
1596005Rpl7l1-ps3ribosomal protein L7-like 1, pseudogene 3X4088264240883559Rat
40972360LOC120099507small nucleolar RNA SNORA17X4091344340913580Rat
1592936Rps24-ps8ribosomal protein S24, pseudogene 8X4103343441033849Rat
7651318Rpl17-ps15ribosomal protein L17, pseudogene 15X4119880941199356Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10272DXWox7211X3170655531706768Ratregion
10692DXWox17203X3103514431035347Ratregion
11167DXWox6144X2697607526976219Ratregion
34148DXMgh8122X2508866425088786Ratregion
34405DXMgh2143X3779773137797874Ratregion
34451DXMgh4509X2180716121807280Ratregion
34559DXMgh12199X3170655331706766Ratregion
33575DXMit5217X4120338041203591Ratregion
36035DXRat13176X3722913437229310Ratregion
36111DXRat8180X2099094720991088Ratregion
36153DXRat10146X3415364634153790Ratregion
36301DXRat9139X2542783025427967Ratregion
35331DXRat25121X3266514332665260Ratregion
36952DXRat11126X4105240741052531Ratregion
36771DXRat12158X3947830739478471Ratregion
39720DXRat86216X3335963333359851Ratregion
39898DXRat111227X3527715835277387Ratregion
39948DXRat110249X3240916332409404Ratregion
39948DXRat110249X3240916332409719Ratregion
38378DXRat36249X2118635021186599Ratregion
40108DXRat108171X2809536328095542Ratregion
38832DXRat61205X3966897439669175Ratregion
39154DXRat83232X2264631222646544Ratregion
39244DXRat40206X2483807724838283Ratregion
42253DXArb10190X3099820630998396Ratregion
41144D7Rat143218X2690590326906098Ratregion
41176DXRat84148X2194054621940694Ratregion
42435DXRat143148X2663487126635013Ratregion
42436DXRat144246X2870550228705757Ratregion
42437DXRat145208X3234538832345593Ratregion
42438DXRat146209X4120338041203580Ratregion
40848DXRat87143X3386554233865693Ratregion
41570DXRat85320X2412670824127019Ratregion
41868DXRat125249X3415050534150752Ratregion
43153DXArb4182X2316376323163945Ratregion
43153DXArb4182X2316376323163945Ratregion
43154DXRat124239X2663484326635104Ratregion
60675DXGot22170X2431265624312826Ratregion
45728DXGot9246X2375952623759772Ratregion
45729DXGot19124X2527734325277469Ratregion
45730DXWox14237X2697605126976273Ratregion
45731DXGot23209X2644072826440937Ratregion
45732DXGot20180X2666621926666399Ratregion
45733DXGot17157X2859107728591232Ratregion
45734DXWox15234X3170655331706766Ratregion
45735DXGot26232X3263262532632857Ratregion
45736DXGot29248X3439377134394019Ratregion
45737DXGot30179X3531220235312381Ratregion
45737DXGot30179X3531610735316288Ratregion
45738DXGot45152X3823575138235905Ratregion
45739DXGot42175X3919419039194365Ratregion
45740DXWox34128X3815842538158547Ratregion
45741DXGot40179X3966897539669150Ratregion
45743DXGot44141X4021663840216779Ratregion
60677DXGot25181X3086033930860519Ratregion
60679DXGot28126X3454410534544231Ratregion
60680DXGot31155X3397137933971534Ratregion
60684DXGot43246X2418482224185068Ratregion
625795DXGot41234X3980445039804684Ratregion
62519DXUia1122X2415228124152398Ratregion
66719DXMco1206X2359789423598098Ratregion
66725DXMco3210X3204426732044491Ratregion
67793DXUwm1145X2584327625843410Ratregion
1576372D1Ztm10152X3066196130662016Ratregion
1630677DXGot174150X3639515536395300Ratregion
1628449DXGot12886X3012123630121317Ratregion
1638547DXGot198156X3142481031424966Ratregion
1632842DXWox38X3170656131706780Ratregion
1633425DXGot152170X3040152330401695Ratregion
1640278DXGot185112X3333121133331323Ratregion
1634155DXGot173233X3415052534150752Ratregion
7206058Tubb5201X3332747633327680Ratregion
7193114Smcx435X2138126821381703Ratregion
5035741AF045340145X2584327625843411Ratregion
5035841PMC224995P1585X3618142036181912Ratregion
5035933PMC311143P1102X2416006124160163Ratregion
5038926RH127412180X3549874435498924Ratregion
5037055A010B08266X3554804335548309Ratregion
5033873RH140438159X3713895737139116Ratregion
5026140RH131066181X3164717331648585Ratregion
5026244RH131465185X3182432831825685Ratregion
5026376RH131969192X2565836425658558Ratregion
5034365RH18201190X3487793834878128Ratregion
5031958AU046559172X3133524231335416Ratregion
5029357RH144489104X2625316726253271Ratregion
5029363RH144512135X3557444935574584Ratregion
5026764RH133439200X2694430026944505Ratregion
5034886AI170398184X3471446034714644Ratregion
5035236AW527792135X3271843232718567Ratregion
5027563AI173248118X3191335331913471Ratregion
5027681D13Die37232X3661804236618274Ratregion
5030597BF398264247X3538950135389748Ratregion
5033431RH138807124X3056999230570116Ratregion
5025504RH128576180X2411670324116883Ratregion
5025794RH129689192X3074037730740569Ratregion
5055181RH143652212X2411747424117686Ratregion
5056161RH144218101X3471263634712737Ratregion
5053867RH142896139X2109175721091896Ratregion
5057526AA819807214X3471389234714106Ratregion
5057526AA819807214X3471389234714106Ratregion
5054647RH143344225X2114157921141804Ratregion
5059430AW530792121X3487751434877635Ratregion
5054799RH143432119X2789384627893965Ratregion
5054819RH143443102X2473493824735040Ratregion
5059612AW524902173X3757241937572592Ratregion
505221136.MMHAP9FLD6.seq185X2878683328787018Ratregion
5053217RH142521135X3561581635615951Ratregion
5053339RH142591188X2379156723791755Ratregion
5053515RH142693118X3218000232180120Ratregion
5059292BF3879960X2158571121586020Ratregion
5050512RH134099187X2565014525650332Ratregion
5050948RH134351208X2109090921091338Ratregion
5041646RH128976210X3164592931646139Ratregion
5044662RH130732185X3001510230015287Ratregion
5041088RH128656209X2800424328004452Ratregion
5045366RH131137219X3036201130362230Ratregion
5046136RH131579194X3471562534715819Ratregion
5045028RH130941189X3057279230572981Ratregion
5046082RH131548200X2711584727116047Ratregion
5047600RH132421186X2379498723795173Ratregion
5047802RH132537205X3191315431913359Ratregion
5045902RH131444181X2794179327941974Ratregion
5049336RH133422187X3255242232552609Ratregion
5049796RH133686202X2806046428060666Ratregion
5047244RH132216195X2390605823906260Ratregion
5048388RH132875186X3715631637156502Ratregion
5042474RH129456216X2114740321147935Ratregion
5042494RH129467155X2114787221148027Ratregion
5040032RH128050194X3161092431611116Ratregion
5042732RH129613150X3417101934171169Ratregion
5042802RH129654186X2494208424942270Ratregion
5042034RH129200189X3549860435498793Ratregion
5040642RH128400185X2494192124942106Ratregion
5043916RH130302193X2370155523701748Ratregion
5043204RH1298910X3417100334171184Ratregion
5075034RH138360120X2806494328065063Ratregion
5073976RH137747122X2379300923793131Ratregion
5074088RH137814204X3394174933941953Ratregion
5072270RH136752161X3396987733970038Ratregion
5072496RH136883212X3182631931826531Ratregion
5075882RH138851165X2135102821351193Ratregion
5074840RH138248204X2144065421440858Ratregion
5080650RH141702215X3191247131912686Ratregion
5079420RH140986187X3463818834638375Ratregion
5075842RH138828140X2109175221091892Ratregion
5079656RH141127220X2811463528114855Ratregion
5078730RH140519203X3746073437460937Ratregion
5078030RH140102216X2940383929404152Ratregion
5078030RH140102216X2940393629404152Ratregion
5080336RH141520181X3471304934713230Ratregion
5080336RH141520181X3471304934713230Ratregion
5071032RH134847187X3001464030014827Ratregion
5073170RH137280211X2137131021371521Ratregion
5080462RH141593154X2114931921149473Ratregion
5078862RH140595184X3723335437233538Ratregion
5071500RH135118198X3004104830041246Ratregion
5073722RH137600138X3549690635497044Ratregion
5070822RH134725203X2138680821387011Ratregion
5070880RH134759218X2202747022027688Ratregion
5071308RH135007213X2705351627053729Ratregion
5072418RH136838181X2565534025655521Ratregion
5066682AU048213176X3234541832345596Ratregion
5066724AU048188270X3380862333808895Ratregion
5066916AU048074136X3745872237458858Ratregion
5066990AU048030208X3973651439736722Ratregion
5068058AU047373229X4015372240153951Ratregion
5069520AU046443191X2682033626820527Ratregion
5070378AI64203693X3955647939556572Ratregion
5065374AI53550992X2724578227245874Ratregion
5060638BE098785160X3029362330293783Ratregion
5062554BF403405179X2109187021092158Ratregion
5060044BF394943112X3942379939423911Ratregion
5061030BF389763121X3525909135259212Ratregion
5061128AW526165160X4088360440883764Ratregion
5066212DXS423102X2111252521112627Ratregion
5064702BF39959695X2621255726212652Ratregion
5066512AU048313129X3521118135211310Ratregion
5061638BF396954123X2142305521423178Ratregion
5087370AW532386150X3621356236213712Ratregion
5089293AU049069172X3188323431883412Ratregion
5083415BI282009114X3231758432317698Ratregion
5088307AU048491166X3188149031881656Ratregion
5081723AI577388110X3395935533959465Ratregion
5084784AI171441249X2796069027960939Ratregion
5080794RH141785205X3955570939555914Ratregion
5081296RH142078192X2443954624439738Ratregion
5086098BF387721191X3004305930043250Ratregion
5503482CNKSR2_4601529X3714814637148675Ratregion
5503732GPR173_9777884X2144886621449749Ratregion
5503732GPR173_9777884X2144886621450366Ratregion
5503732GPR173_9777884X2144963721449749Ratregion
5504080px-70g9238X2805738328057621Ratregion
5504101px-37e4262X2799973327999995Ratregion
5503849UniSTS:4718511100X2144157121442671Ratregion
5503998px-15d1121X3075930430759425Ratregion
5504014px-24c3190X3022885430229044Ratregion
5504050px-44e9286X2498718324987469Ratregion
5504000px-15e7254X2971739329717647Ratregion
5504034px-38g11234X4098926140989495Ratregion
5504484PMC22111P1619X3005227030052889Ratregion
5504076px-6e9104X3610528436105388Ratregion
5504107px-5g3194X3610519036105384Ratregion
5504212RH15676190X3713875837138948Ratregion
5504300D8S1373E183X3732432437324507Ratregion
5504893ha31131037X2708962027090343Ratregion
5505237Phka284X3417559134175675Ratregion
5505085Hnrnpd263X3184506231845321Ratregion
5506771G45234231X2497970724979938Ratregion
5507065UniSTS:224320161X3713765537137816Ratregion
5506997fi17a01.x10X3255526632555943Ratregion
5500577RH136048197X3735014937350347Ratregion
5500163D14Mit171875X4016333040164206Ratregion
5500643RH136436200X3191315831913358Ratregion
5501197PMC153757P1249X3332755933327808Ratregion
5505468UniSTS:530593204X3743982937440033Ratregion
5501978MARC_21748-21749:1023808694:5266X3010397730104243Ratregion
5502821TMSB4X218X2714630027146518Ratregion
5502825GPM6B166X2807451028074676Ratregion
5502827GLRA2296X2902087829021174Ratregion
5502451RH124898225X3191314231913367Ratregion
Position Markers

Flank 1: (DXRat8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X20,990,947 - 20,991,088 (+)MAPPER
Rnor_6.0X21,592,623 - 21,592,783NCBI
Rnor_5.0X21,859,080 - 21,859,240UniSTS
RGSC_v3.4X41,386,879 - 41,387,039UniSTS
RGSC_v3.4X41,386,788 - 41,387,080RGD
RGSC_v3.1X41,440,348 - 41,440,508RGD
CeleraX21,272,130 - 21,272,290UniSTS
RH 3.4 MapX186.31UniSTS
RH 3.4 MapX186.31RGD
RH 2.0 Map21223.4RGD
SHRSP x BN MapX6.8999RGD
FHH x ACI MapX7.93RGD
Cytogenetic MapXq21UniSTS
Peak: (DXMit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X41,203,380 - 41,203,591 (+)MAPPER
Rnor_6.0X44,468,090 - 44,468,300NCBI
Rnor_5.0X44,765,137 - 44,765,347UniSTS
RGSC_v3.4X62,894,095 - 62,894,306RGD
RGSC_v3.4X62,894,096 - 62,894,306UniSTS
RGSC_v3.1X62,947,565 - 62,947,775RGD
CeleraX41,864,292 - 41,864,502UniSTS
RH 3.4 MapX580.3RGD
RH 3.4 MapX580.3UniSTS
SHRSP x BN MapX14.89UniSTS
SHRSP x BN MapX14.89RGD
FHH x ACI MapX16.69RGD
Cytogenetic MapXq22UniSTS
Flank 2: (DXMit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X41,203,380 - 41,203,591 (+)MAPPER
Rnor_6.0X44,468,090 - 44,468,300NCBI
Rnor_5.0X44,765,137 - 44,765,347UniSTS
RGSC_v3.4X62,894,095 - 62,894,306RGD
RGSC_v3.4X62,894,096 - 62,894,306UniSTS
RGSC_v3.1X62,947,565 - 62,947,775RGD
CeleraX41,864,292 - 41,864,502UniSTS
RH 3.4 MapX580.3RGD
RH 3.4 MapX580.3UniSTS
SHRSP x BN MapX14.89UniSTS
SHRSP x BN MapX14.89RGD
FHH x ACI MapX16.69RGD
Cytogenetic MapXq22UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2099094741052531Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2099094741203591Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X144797220991088Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X162371522646544Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general the S allele from CDS was responsible for low glucose level whereas the R allele was responsible for high glucose level 1626640
qtl_general software package used: one-way ANOVA and MultiQTL version 2.5 1626640
qtl_general measurement method: rats were fasted overnight and then OGTT was performed 1626640
qtl_general significant cosegregation for blood glucose level was observed but the pattern was opposite to that of Gluco32 and Gluco33 1626640
qtl_general number of animals used: 101 F2 males 1626640
qtl_map this region incorporates 74 known and 24 predicted genes and spans 20 cM 1626640