Hnrnpd-ps1 (heterogeneous nuclear ribonucleoprotein D, pseudogene 1) - Rat Genome Database

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Gene: Hnrnpd-ps1 (heterogeneous nuclear ribonucleoprotein D, pseudogene 1) Rattus norvegicus
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Symbol: Hnrnpd-ps1
Name: heterogeneous nuclear ribonucleoprotein D, pseudogene 1
RGD ID: 2318297
Description:
Type: pseudo
RefSeq Status: MODEL
Previously known as: heterogeneous nuclear ribonucleoprotein D-like; LOC100362390
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X35,472,554 - 35,478,491 (+)NCBIGRCr8
mRatBN7.2X31,842,691 - 31,846,693 (+)NCBImRatBN7.2mRatBN7.2
Rnor_6.0X33,579,906 - 33,580,972 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X33,927,064 - 33,928,201 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X52,599,850 - 52,600,895 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX32,148,679 - 32,149,745 (+)NCBICelera
Cytogenetic MapXq14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in Hnrnpd-ps1
7 total Variants

QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2099094741052531Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2099094741203591Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat

Markers in Region
Hnrnpd  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8X35,476,861 - 35,477,120 (+)Marker Load Pipeline
mRatBN7.2X31,845,062 - 31,845,321 (+)MAPPERmRatBN7.2
Rnor_6.0X33,580,661 - 33,580,919NCBIRnor6.0
Rnor_5.0X33,927,890 - 33,928,148UniSTSRnor5.0
RGSC_v3.4X52,600,676 - 52,600,934UniSTSRGSC3.4
CeleraX32,149,434 - 32,149,692UniSTS
Cytogenetic Map14p22UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2537 BioCyc
NCBI Gene 100362390 ENTREZGENE
PhenoGen Hnrnpd-ps1 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-10 Hnrnpd-ps1  heterogeneous nuclear ribonucleoprotein D, pseudogene 1  LOC100362390  heterogeneous nuclear ribonucleoprotein D-like  Symbol and Name Changed 1299863 APPROVED
2010-05-05 LOC100362390  heterogeneous nuclear ribonucleoprotein D-like      Symbol and Name status set to provisional 70820 PROVISIONAL