Memor2 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Memor2 (Memory QTL 2) Rattus norvegicus

Symbol: Memor2
Name: Memory QTL 2
RGD ID: 1598873
Also known as: Nav-2
Trait: exploratory behavior trait   (VT:0010471)    
Measurement Type: average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus   (CMO:0002674)    
LOD Score: 2.5
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.0X21,592,623 - 44,320,739RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0X21,859,080 - 44,620,040RGDRnor5.0
RGSC_v3.4X41,386,788 - 62,691,414RGDRGSC3.4
RGSC_v3.1X41,440,348 - 62,744,879RGD
Cross Type: intercross
Strains Crossed: SR/JrHsd SS/JrHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SR/JrHsd  (IEA)
SS/JrHsd  (IEA)

References


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3307Pfkfb16-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1X2309214323145923Rat
2084Alas25'-aminolevulinate synthase 2X2316757623187356Rat
2750Grprgastrin releasing peptide receptorX3274625932786266Rat
3286Pdha1pyruvate dehydrogenase E1 subunit alpha 1X3732977937343410Rat
3323Phexphosphate regulating endopeptidase homolog, X-linkedX4046004740717982Rat
2107Amelxamelogenin, X-linkedX2643919726450495Rat
619740Rab9aRAB9A, member RAS oncogene familyX2952525629547295Rat
620043Prdx4peroxiredoxin 4X4349545343512994Rat
2705Glra2glycine receptor, alpha 2X3061289430832078Rat
2640Mid1midline 1X2545878225839941Rat
2693Gja6gap junction protein, alpha 6X3562180535622665Rat
620748Gpr173G-protein coupled receptor 173X2241775322418873Rat
620125Rbbp7RB binding protein 7, chromatin remodeling factorX3364868233665821Rat
620904Sh3kbp1SH3 domain-containing kinase-binding protein 1X3779000438196365Rat
620695Vegfdvascular endothelial growth factor DX3181648031852239Rat
69233Smpxsmall muscle protein, X-linkedX4002920040086870Rat
69231Hsd17b10hydroxysteroid (17-beta) dehydrogenase 10X2169679621699241Rat
708489Cltrncollectrin, amino acid transport regulatorX3211808232153687Rat
621622Tmsb4xthymosin beta 4, X-linkedX2859340528617267Rat
3415Prps2phosphoribosyl pyrophosphate synthetase 2X2843527528472882Rat
628618Adgrg2adhesion G protein-coupled receptor G2X3693018637054968Rat
708381Clcn4chloride voltage-gated channel 4X2501617725082563Rat
1303338Spink6serine peptidase inhibitor, Kazal type 6X4303306643044975Rat
620580Gpm6bglycoprotein m6bX2960460729751174Rat
728890Ace2angiotensin I converting enzyme 2X3205073432095860Rat
2253S100gS100 calcium binding protein GX3344282033445714Rat
1306925Trappc2trafficking protein particle complex 2X2955087129562135Rat
61991Smc1astructural maintenance of chromosomes 1AX2171097621755708Rat
708454Cnksr2connector enhancer of kinase suppressor of Ras 2X3971100139953860Rat
1560537Asb9ankyrin repeat and SOCS box-containing 9X3170063731745790Rat
1359188Acot9acyl-CoA thioesterase 9X4354306943592200Rat
1559892RGD1559892similar to 60S ribosomal protein L29 (P23)X3304499033045530Rat
1549783Ca5bcarbonic anhydrase 5BX3223210632291124Rat
1560666Wwc3WWC family member 3X2487249624988671Rat
1359160Gemin8gem (nuclear organelle) associated protein 8X2980660529825439Rat
1549779Saxol1stabilizer of axonemal microtubules like 1X2952026329522420Rat
1564527Ptchd1patched domain containing 1X4255891242610430Rat
1563369Ctps2CTP synthase 2X3338308733522852Rat
1563855Hccsholocytochrome c synthaseX2629402826303461Rat
1560439Klhl34kelch-like family member 34X3995257639956856Rat
1561763Huwe1HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1X2147462721603348Rat
1561803RGD1561803similar to uracil DNA glycosylaseX3485565134856292Rat
1566031Frmpd4FERM and PDZ domain containing 4X2723164828206890Rat
1561818NhsNHS actin remodeling regulatorX3431210234675912Rat
1563321Egfl6EGF-like-domain, multiple 6X2943078929488737Rat
1562231Ofd1OFD1, centriole and centriolar satellite proteinX2956216529602934Rat
1560203RGD1560203similar to ferritin heavy polypeptide-like 17X3416167134165304Rat
1566060RGD1566060similar to Magea5X4329849743310965Rat
1562772Ppef1protein phosphatase with EF-hand domain 1X3582268735947690Rat
1560139Rai2retinoic acid induced 2X3473189134794589Rat
1564852Map7d2MAP7 domain containing 2X3840057838467825Rat
1549733LOC317456hypothetical LOC317456X4388124643882204Rat
1564826Smsspermine synthaseX4036364640415110Rat
1560601Kdm5clysine demethylase 5CX2230266422349298Rat
1560603Map3k15mitogen-activated protein kinase kinase kinase 15X3734225137755373Rat
1549763Msl3MSL complex subunit 3X2701582627033562Rat
1562161Bclaf3BCLAF1 and THRAP3 family member 3X3829400938353525Rat
1303113Syap1synapse associated protein 1X3352807133562584Rat
1561862Ap1s2adaptor related protein complex 1 subunit sigma 2X3232988332376301Rat
1564836RGD1564836similar to HMGA1bX3334917833349519Rat
1566197RGD1566197similar to prohibitinX3471419434715252Rat
1584769LOC679773similar to 40S ribosomal protein SA (p40) (34/67 kDa laminin receptor)X3885407738854940Rat
1584113LOC688853similar to Proteasome subunit beta type 6 precursor (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y)X3368094633685020Rat
1359621Ribc1RIB43A domain with coiled-coils 1X2169936121711335Rat
1586601LOC686095hypothetical protein LOC686095X2823758228238776Rat
1583667LOC679821similar to expressed in non-metastatic cells 1, protein (NM23A) (nucleoside diphosphate kinase)X3938320139387739Rat
1559536RGD1559536similar to vitellogenin-like 1 precursorX4295123742954609Rat
1583773LOC367801similar to sequestosome 1 isoform 1X4326863943269848Rat
1565983Apex2apurinic/apyrimidinic endodeoxyribonuclease 2X2314608523166676Rat
1565844RGD1565844similar to RIKEN cDNA 1700045I19X3249557332496646Rat
1584087LOC688879similar to Mitochondrial carrier protein CGI-69X3373657933737760Rat
1566298Asb11ankyrin repeat and SOCS box containing 11X3175829431781863Rat
1565799Gpr143G protein-coupled receptor 143X2366836323693162Rat
1563283Tspyl2TSPY-like 2X2240811822413886Rat
1563860Rps6ka3ribosomal protein S6 kinase A3X3746973637576055Rat
1564289Scml2Scm polycomb group protein like 2X3530523535431271Rat
1560334Myl6bmyosin light chain 6BX4383177843833044Rat
1563947RGD1563947similar to RIKEN cDNA 4933400A11X2573728125738144Rat
1565643BmxBMX non-receptor tyrosine kinaseX3197623132046326Rat
1559763Zrsr2zinc finger (CCCH type), RNA binding motif and serine/arginine rich 2X3230470732327419Rat
1560198Eif1axeukaryotic translation initiation factor 1A, X-linkedX3757995937595300Rat
1565163Shroom2shroom family member 2X2347886923649424Rat
1560997Rps27a-ps5ribosomal protein S27a, pseudogene 5X3702643737026904Rat
1563952Mospd2motile sperm domain containing 2X3114096731182823Rat
1565778Magea8MAGE family member A8X4317200143184700Rat
1561555FancbFA complementation group BX3112401831140790Rat
1562090RGD1562090similar to cDNA sequence BC023488X4147013541470933Rat
1563357Tlr7toll-like receptor 7X2848683628513004Rat
1561642Reps2RALBP1 associated Eps domain containing 2X3378661134062941Rat
1564371Txlngtaxilin gammaX3359964333648525Rat
1584890LOC367796similar to 60S ribosomal protein L13X3725399837256572Rat
1584893LOC367787similar to amyloid beta precursor protein (cytoplasmic tail) binding protein 2X3221279032214093Rat
1584894Tceanctranscription elongation factor A N-terminal and central domain containingX2949876229505494Rat
1566171Mbtps2membrane-bound transcription factor peptidase, site 2X4025893340309047Rat
1582975LOC688932similar to heat shock protein 8X3429522234297330Rat
1589747LOC315370similar to heat shock protein 1, alphaX3627599736280476Rat
1590206LOC685762hypothetical protein LOC685762X2411702324121003Rat
1592987Cldn34bclaudin 34BX4378071243786767Rat
1592936LOC680393similar to ribosomal protein S24X4430167044305177Rat
1592959Cldn34dclaudin 34DX4387040243878881Rat
1594343Cldn34aclaudin 34AX2337117123415287Rat
1590221LOC685747hypothetical protein LOC685747X2405896524061851Rat
1589067Samt2spermatogenesis associated multipass transmembrane protein 2X2194454721947901Rat
1589079LOC685806hypothetical protein LOC685806X2268201522684323Rat
1587659LOC688520similar to hormone-regulated proliferation-associated 20 kDa proteinX3101238031013030Rat
1359212PirpirinX3185232231968152Rat
1563991RGD1563991similar to TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factorX3879862038800418Rat
1586172LOC302664similar to thyroid hormone receptor associated protein 3X3132206031324977Rat
1586173LOC302647similar to THUMP domain containing 3X4321220443213836Rat
1586174Sat1spermidine/spermine N1-acetyl transferase 1X4362648043629767Rat
1586175LOC302613similar to ribosomal protein L31X2218367422184053Rat
1585274LOC688733similar to Dead end protein homolog 1 (RNA-binding motif, single-stranded interacting protein 4)X3332772333329839Rat
1589723Pigaphosphatidylinositol glycan anchor biosynthesis, class AX3178682331799751Rat
1590739LOC679218similar to Proteasome subunit beta type 3 (Proteasome theta chain) (Proteasome chain 13) (Proteasome component C10-II)X3915416439154762Rat
1587653LOC688526similar to ribonucleic acid binding protein S1X3105444631055377Rat
1594258LOC678972similar to chaperonin subunit 6a (zeta)X3709618137138552Rat
1594528LOC317516similar to enthoprotinX4243274842436137Rat
1596945Phka2phosphorylase kinase regulatory subunit alpha 2X3597065036926616Rat
1594195LOC680236hypothetical protein LOC680236X2278766222797069Rat
1596005LOC691709similar to ribosomal protein L7-like 1X4415772444158535Rat
1595434LOC680190hypothetical protein LOC680190X4328963143294392Rat
1589415LOC680661similar to RIKEN cDNA 1700001F22X3620504736205562Rat
1590194Samt4spermatogenesis associated multipass transmembrane protein 4X2436207924364320Rat
1590327Tlr8toll-like receptor 8X2853915828562803Rat
1591314LOC685699hypothetical protein LOC685699X2346488423469812Rat
1596746Spink9serine peptidase inhibitor, Kazal type 9X4301261243020370Rat
1590179LOC685789hypothetical protein LOC685789X2268197522749355Rat
1591324LOC685689similar to RAB7, member RAS oncogene familyX2341639523416991Rat
1592558LOC685590similar to Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (PI3-kinase p110 subunit alpha) (PtdIns-3-kinase p110) (PI3K)X2324312623254011Rat
1598351LOC295142similar to peptidylprolyl isomerase DX3665698236658103Rat
1596452Iqsec2IQ motif and Sec7 domain ArfGEF 2X2221213722293810Rat
1642515Rs1retinoschisin 1X3574995735777243Rat
2319724LOC100361649hypothetical LOC100361649X4243765342439403Rat
2319751LOC100361621hypothetical LOC100361621X3349178933494624Rat
2318536LOC100362249hypothetical LOC100362249X2419213324300928Rat
2319146LOC100361934NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4X4232878942329266Rat
2319767LOC100361604hypothetical LOC100361604X4011901940119635Rat
2319169LOC100361911poly(rC) binding protein 4-likeX2278126422783151Rat
2319924LOC100361543RhoA activator C11orf59-likeX3726142837262470Rat
2318689LOC100362195hypothetical LOC100362195X2414174224142349Rat
2318711LOC100362173rCG36365-likeX4371312843746425Rat
2318145LOC100362443hypothetical LOC100362443X2261109922614012Rat
2318768LOC100362115rCG64250-likeX2408083924098803Rat
2320115LOC100361450hypothetical LOC100361450X3895269138953645Rat
2318297LOC100362390heterogeneous nuclear ribonucleoprotein D-likeX3357990633580972Rat
2318493LOC100362292ribosomal protein S6-likeX3298340732989886Rat
2318494LOC100362291hypothetical LOC100362291X2294454522961106Rat
2323364Arhgap6Rho GTPase activating protein 6X2631456126845242Rat
2320481LOC100361282ribosomal protein S9-likeX3837134738384351Rat
2323576LOC100363019hypothetical LOC100363019X2416447724166791Rat
2324302LOC100362656hypothetical LOC100362656X3636183436363194Rat
2324089Mt1fmetallothionein 1FX3578320935790894Rat
2324133Cdkl5cyclin-dependent kinase-like 5X3553639635773204Rat
2324567Yy2YY2 transcription factorX4028592340289545Rat
6488256TrotrophininX2307980923090912Rat
6490096LOC100911869uncharacterized LOC100911869X2261550422657485Rat
6488542LOC100912112uncharacterized LOC100912112X2298156022987953Rat
6490802LOC10091174160S acidic ribosomal protein P0-likeX4366442143665016Rat
6502317LOC100909667high mobility group protein B4-likeX3616574636166886Rat
6499548LOC100910245ribose-phosphate pyrophosphokinase 2-likeX2915734929176858Rat
6499893LOC100910203WD repeat-containing protein 76-likeX3715517737157528Rat
6503407LOC100909517uncharacterized LOC100909517X2462671024630064Rat
7525252LOC102550331uncharacterized LOC102550331X3369539333709764Rat
7505527LOC102557137E3 ubiquitin-protein ligase RNF168-likeX4353493943538333Rat
7505939LOC102555721uncharacterized LOC102555721X3237118132372222Rat
7612152LOC10255167360S ribosomal protein L15-likeX3014590230148089Rat
7650146LOC102555294ubiquitin-like protein 4A-likeX3772863937729454Rat
7558343LOC102556957uncharacterized LOC102556957X4391073043915292Rat
7652004LOC102550740uncharacterized LOC102550740X3466899534672301Rat
7623752LOC102551844high mobility group protein B1-likeX3068357830684215Rat
7595622LOC102555147uncharacterized LOC102555147X3721034037236462Rat
7548499LOC102548068nuclease-sensitive element-binding protein 1-likeX2851587028545427Rat
7550250LOC102546402heat shock protein HSP 90-beta-likeX3857504238578758Rat
7584297LOC102547980uncharacterized LOC102547980X2203813922040489Rat
7693716LOC102551617uncharacterized LOC102551617X2923521629254991Rat
7707875LOC102554817uncharacterized LOC102554817X2524942525250257Rat
7723901Scml1Scm polycomb group protein like 1X3467672834694251Rat
7725282LOC102555398uncharacterized LOC102555398X3216667632176524Rat
7741042Bend2BEN domain containing 2X3515137635200501Rat
7702167LOC102549869uncharacterized LOC102549869X2868655628698975Rat
7702890LOC102547271male-specific lethal 3 homologX2694857726950290Rat
7675934LOC102555688probable G-protein coupled receptor 173-likeX2243610822441049Rat
7710901LOC10254816760S ribosomal protein L15-likeX3016386930222206Rat
9177816LOC103690112E3 ubiquitin-protein ligase HUWE1-likeX2320627023219502Rat
9102731LOC103690822uncharacterized LOC103690822X3436152734366205Rat
9081270LOC103690811uncharacterized LOC103690811X2333456023343999Rat
9148120LOC103694482mitogen-activated protein kinase kinase kinase 15-likeX3734234237343452Rat
9165099LOC103694481uncharacterized LOC103694481X3647156136645777Rat
9121813LOC103690816uncharacterized LOC103690816X2894812528957786Rat
9350894LOC10369082160S ribosomal protein L39X3372190733722115Rat
9216888LOC103694475uncharacterized LOC103694475X2338176923396492Rat
9268945LOC103694479uncharacterized LOC103694479X3758652037588347Rat
9227212LOC10369448560S ribosomal protein L7 pseudogeneX4361524943616006Rat
9375048LOC103690823ubiquitin-40S ribosomal protein S27a pseudogeneX3386723633869622Rat
9377282LOC103690819uncharacterized LOC103690819X3263688232648370Rat
9332997LOC10369082460S ribosomal protein L15 pseudogeneX3698755036988234Rat
9252019LOC103690828uncharacterized LOC103690828X4031746940322110Rat
9362363LOC103694483fructose-bisphosphate aldolase A pseudogeneX4050938640519141Rat
9421617LOC103690600serine protease inhibitor Kazal-type 11-likeX4282739042844983Rat
9466165LOC103690818cytochrome c oxidase assembly factor 5 pseudogeneX3201258832013822Rat
9427708LOC10369083160S ribosomal protein L34 pseudogeneX4255381942554290Rat
9389965LOC103694484serine protease inhibitor Kazal-type 11-likeX4269765242705152Rat
9429714LOC103690829uncharacterized LOC103690829X4221164742218922Rat
9393063LOC103694478ubiquitin-conjugating enzyme E2 variant 1 pseudogeneX3329625833297048Rat
9431367LOC103690817mitochondrial import receptor subunit TOM7 homolog pseudogeneX2906081029060971Rat
9433700LOC103690830uncharacterized LOC103690830X4216095842268101Rat
9434873LOC103690826uncharacterized LOC103690826X3876180438763283Rat
9395807LOC103694480uncharacterized LOC103694480X3752452637525725Rat
9407621LOC103690825uncharacterized LOC103690825X3863123638636215Rat
9410908LOC103690815uncharacterized LOC103690815X2514221625163997Rat
9420291LOC103690820interferon-stimulated 20 kDa exonuclease-like 2 pseudogeneX3337402333375334Rat
10045415KantrKDM5C adjacent transcriptX2236952122399881Rat
11361754LOC108349190peptidyl-prolyl cis-trans isomerase H pseudogeneX3635600636356590Rat
11454396LOC108353275uncharacterized LOC108353275X2521274225221567Rat
11466718LOC108353288glyceraldehyde-3-phosphate dehydrogenase pseudogeneX4274526142746378Rat
11468143LOC10834921760S ribosomal protein L19 pseudogeneX3588433435885162Rat
11435878LOC108349216uncharacterized LOC108349216X3458355334589278Rat
11436965LOC108353289glyceraldehyde-3-phosphate dehydrogenase pseudogeneX4292425542925372Rat
11428359LOC108349120glyceraldehyde-3-phosphate dehydrogenase pseudogeneX3337124933373930Rat
11365896LOC10834912240S ribosomal protein S2 pseudogeneX2742921827430800Rat
11451298LOC108353264endogenous retrovirus group K member 18 Pol protein-likeX2288113722892429Rat
11371832LOC10834921940S ribosomal protein S6 pseudogeneX3858208438582850Rat
11406874LOC10834916660S ribosomal protein L35a pseudogeneX4409170344092057Rat
11408642LOC108348216probable G-protein coupled receptor 173X2241894822419698Rat
11377812LOC108349215gamma-aminobutyric acid receptor-associated protein-like 2 pseudogeneX3382785633829369Rat
11403223LOC108349165uncharacterized LOC108349165X3219397332197258Rat
11381977LOC108349214uncharacterized LOC108349214X3244949532475758Rat
11503403LOC108353262olfactory receptor 4C6-likeX3656537536566500Rat
11516539LOC108349213ubiquitin-conjugating enzyme E2 K pseudogeneX3184752331848125Rat
11494000LOC108353287endogenous retrovirus group K member 9 Pol protein-likeX3646175936462542Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10272DXWox7211X3344385033444060Ratregion
10692DXWox17203X3278297332783175Ratregion
11080DXMgh5142X2314340023143537Ratregion
11080DXMgh5142X2314325523143537Ratregion
11081DXArb5301X2314342023143720Ratregion
11081DXArb5301X2314327523143720Ratregion
11082DXWox4139X2314340123143535Ratregion
11082DXWox4139X2314325623143535Ratregion
11167DXWox6144X2915737929157522Ratregion
11167DXWox6144X2843543628435579Ratregion
34148DXMgh8122X2645150026451621Ratregion
34405DXMgh2143X4065328140653423Ratregion
34451DXMgh4509X2347356423473680Ratregion
34559DXMgh12199X3344384833444058Ratregion
36035DXRat13176X4002509940025274Ratregion
36111DXRat8180X2159262321592783Ratregion
36153DXRat10146X3594947135949614Ratregion
36301DXRat9139X2678207126782209Ratregion
35240DXRat24151X2769627527696404Ratregion
35331DXRat25121X3442451834424634Ratregion
36952DXRat11126X4432061644320739Ratregion
37648DXRat73139X3676225736762393Ratregion
36771DXRat12158X4236118242361345Ratregion
34991DXRat66138X3676946036769609Ratregion
39720DXRat86216X3514241335142630Ratregion
39898DXRat111227X3830832638308554Ratregion
39898DXRat111227X3825061038250838Ratregion
39948DXRat110249X3416879934169383Ratregion
39948DXRat110249X3416879934169037Ratregion
38378DXRat36249X2178730421787552Ratregion
38398DXRat54221X4031409040314329Ratregion
40108DXRat108171X2964217929642357Ratregion
38832DXRat61205X4254635142546549Ratregion
39154DXRat83232X2433160624331837Ratregion
39244DXRat40206X2620633126206536Ratregion
42253DXArb10190X3274604332746230Ratregion
41176DXRat84148X2360676023606907Ratregion
42435DXRat143148X2802552228025663Ratregion
42436DXRat144246X3026907230269326Ratregion
42437DXRat145208X3408580334086005Ratregion
40848DXRat87143X3564042435640574Ratregion
41570DXRat85320X2546881725469127Ratregion
41658DXRat129241X3676224936762487Ratregion
41868DXRat125249X3594649335946740Ratregion
43153DXArb4182X2448501524485196Ratregion
43153DXArb4182X2213714722137328Ratregion
43154DXRat124239X2802549428025754Ratregion
60675DXGot22170X2565610225656271Ratregion
45728DXGot9246X2504670325046948Ratregion
45729DXGot19124X2663857126638694Ratregion
45730DXWox14237X2915735529157576Ratregion
45730DXWox14237X2843541228435633Ratregion
45731DXGot23209X2783025827830466Ratregion
45732DXGot20180X2805704328057222Ratregion
45733DXGot17157X3012990030130054Ratregion
45734DXWox15234X3344384833444058Ratregion
45735DXGot26232X3439215534392386Ratregion
45736DXGot29248X3702622637026473Ratregion
45737DXGot30179X3834465038344828Ratregion
45738DXGot45152X4110066541100816Ratregion
45739DXGot42175X4205989242060066Ratregion
45740DXWox34128X4103048141030602Ratregion
45741DXGot40179X4254635242546524Ratregion
45743DXGot44141X4368995843690098Ratregion
60677DXGot25181X3260873332608910Ratregion
60679DXGot28126X3717017337170298Ratregion
60680DXGot31155X3575767635757830Ratregion
60684DXGot43246X2552722825527473Ratregion
625795DXGot41234X4311010243110335Ratregion
62519DXUia1122X2549439025494506Ratregion
66719DXMco1206X2488562324885826Ratregion
66725DXMco3210X3378141833781641Ratregion
67793DXUwm1145X2722105727221190Ratregion
1630677DXGot174150X3916012139160265Ratregion
1628449DXGot12886X3186430831864388Ratregion
1638547DXGot198156X3317276033172915Ratregion
1632842DXWox38X3344385633444072Ratregion
1633425DXGot152170X3215994732160116Ratregion
1640278DXGot185112X3511456835114679Ratregion
1634155DXGot173233X3594651335946740Ratregion
7206058Tubb5201X3511083335111036Ratregion
7193114Smcx435X2234790522348339Ratregion
7205884UniSTS:257081259X2324638623246644Ratregion
5035741AF045340145X2722105727221191Ratregion
5035841PMC224995P1585X3895300538953496Ratregion
5035933PMC311143P1102X2550216925502270Ratregion
5036079Alas2127X2316768623167812Ratregion
5038926RH127412180X3759507437595253Ratregion
5036565AU048449125X2840599028406112Ratregion
5037055A010B08266X3754477937545044Ratregion
5033873RH140438159X3994227139942429Ratregion
5026140RH131066181X3338438833385799Ratregion
5026244RH131465185X3356024633561602Ratregion
5026376RH131969192X2703621227036405Ratregion
5031822AU047040213X2665043726650649Ratregion
5031854AU046935246X2159264821592888Ratregion
5034365RH18201190X3779065937790848Ratregion
5031958AU046559172X3307765933077830Ratregion
5029357RH144489104X2764196527642068Ratregion
5029363RH144512135X3751853337518667Ratregion
5026764RH133439200X2840398028404184Ratregion
5034886AI170398184X3734356237343745Ratregion
5035236AW527792135X3447792934478063Ratregion
5027563AI173248118X3364894833649065Ratregion
5027681D13Die37232X3938690139387132Ratregion
5030597BF398264247X3841431038414556Ratregion
5033431RH138807124X3232727432327397Ratregion
5025504RH128576180X2545881225458991Ratregion
5025794RH129689192X3249641032496601Ratregion
5052053RH94813185X2309214623092329Ratregion
5055181RH143652212X2545958325459794Ratregion
5056161RH144218101X3734173837341838Ratregion
5053867RH142896139X2169940221699540Ratregion
5057526AA819807214X3734299437343207Ratregion
5054647RH143344225X2174923321749457Ratregion
5059430AW530792121X3779023537790355Ratregion
5054799RH143432119X2944055129440669Ratregion
5054819RH143443102X2609061326090714Ratregion
5059612AW524902173X4041670640416878Ratregion
505221136.MMHAP9FLD6.seq185X3035122530351409Ratregion
5053217RH142521135X3747682537476959Ratregion
5053339RH142591188X2507874025078927Ratregion
5053515RH142693118X3392435833924475Ratregion
5059292BF3879960X2326694823267256Ratregion
5050512RH134099187X2702785727028043Ratregion
5051621AA40940896X2309076023090855Ratregion
5050948RH134351208X2169855421698982Ratregion
5041646RH128976210X3338314433383353Ratregion
5044662RH130732185X3175891231759096Ratregion
5041088RH128656209X2955106429551272Ratregion
5045366RH131137219X3211812732118345Ratregion
5046136RH131579194X3734472737344920Ratregion
5045028RH130941189X3232992732330115Ratregion
5046082RH131548200X2856397728564178Ratregion
5047600RH132421186X2508216025082345Ratregion
5047802RH132537205X3364874933648953Ratregion
5045902RH131444181X2948848729488667Ratregion
5049336RH133422187X3431268934312875Ratregion
5049796RH133686202X2960728429607485Ratregion
5047244RH132216195X2524998925250190Ratregion
5048388RH132875186X3995962939959814Ratregion
5042474RH129456216X2175505921755590Ratregion
5042494RH129467155X2175552821755682Ratregion
5040032RH128050194X3334816533348356Ratregion
5042732RH129613150X3596684035966989Ratregion
5042802RH129654186X2630317026303355Ratregion
5042034RH129200189X3759520537595393Ratregion
5040642RH128400185X2630300726303191Ratregion
5043594RH130115185X2309221023092394Ratregion
5043916RH130302193X2498836324988555Ratregion
5043204RH1298910X3596682435967004Ratregion
5075034RH138360120X2961176329611882Ratregion
5073976RH137747122X2508018225080303Ratregion
5074088RH137814204X3571699835717201Ratregion
5072270RH136752161X3575617435756334Ratregion
5072496RH136883212X3356223733562448Ratregion
5075882RH138851165X2230824622308410Ratregion
5074840RH138248204X2240929422409497Ratregion
5080650RH141702215X3364806633648280Ratregion
5079420RH140986187X3726215137262337Ratregion
5075842RH138828140X2169939721699536Ratregion
5079656RH141127220X2966144929661668Ratregion
5078730RH140519203X4030865240308854Ratregion
5078030RH140102216X3112432831124543Ratregion
5078030RH140102216X3112418431124543Ratregion
5080336RH141520181X3734215137342331Ratregion
5071032RH134847187X3175845031758636Ratregion
5073170RH137280211X2233845922338669Ratregion
5073170RH137280211X2232845022328660Ratregion
5080462RH141593154X2175697521757128Ratregion
5080492RH141610203X2324269523242897Ratregion
5078862RH140595184X4002931940029502Ratregion
5071500RH135118198X3178485631785053Ratregion
5073722RH137600138X3759695437597091Ratregion
5070822RH134725203X2235344522353647Ratregion
5070880RH134759218X2369291823693135Ratregion
5071308RH135007213X2851213728512349Ratregion
5071442RH135084183X2280209222802274Ratregion
5072418RH136838181X2703320527033385Ratregion
5066682AU048213176X3408583334086008Ratregion
5066724AU048188270X3558663135586902Ratregion
5066916AU048074136X4030664040306775Ratregion
5066990AU048030208X4261352942613736Ratregion
5068058AU047373229X4362185043622078Ratregion
5069520AU046443191X2821262828212818Ratregion
5070378AI64203693X4243576742435859Ratregion
5061886BI294000152X2314649923146650Ratregion
5065374AI53550992X2868796628688057Ratregion
5060638BE098785160X3204995732050116Ratregion
5062554BF403405179X2169951521699802Ratregion
5060044BF394943112X4229566442295775Ratregion
5061030BF389763121X3829026138290381Ratregion
5061030BF389763121X3823254638232666Ratregion
5061128AW526165160X4415868544158844Ratregion
5066212DXS423102X2172017921720280Ratregion
5064702BF39959695X2760144627601540Ratregion
5066420AU048367141X3649957436499718Ratregion
5066512AU048313129X3818503738185165Ratregion
5061638BF396954123X2238917222389294Ratregion
5087370AW532386150X3898550638985655Ratregion
5089293AU049069172X3361906233619237Ratregion
5083415BI282009114X3405821334058326Ratregion
5088307AU048491166X3361731933617484Ratregion
5081723AI577388110X3574546935745578Ratregion
5084784AI171441249X2950738129507629Ratregion
5080794RH141785205X4243499742435201Ratregion
5081296RH142078192X2578494225785133Ratregion
5085848BE104231151X2316644323166593Ratregion
5086098BF387721191X3178685031787040Ratregion
5503482CNKSR2_4601529X3995145939951987Ratregion
5503732GPR173_9777884X2241750322419112Ratregion
5503732GPR173_9777884X2241750322418384Ratregion
5503984UniSTS:2570830X2324400523244413Ratregion
5504080px-70g9238X2960420329604440Ratregion
5504101px-37e4262X2954655529546816Ratregion
5503849UniSTS:4718511100X2241021122411310Ratregion
5503978UniSTS:257082526X2324531623245841Ratregion
5503998px-15d1121X3251506032515180Ratregion
5504014px-24c3190X3197783531978024Ratregion
5504050px-44e9286X2634827926348564Ratregion
5504000px-15e7254X3144461031444863Ratregion
5504034px-38g11234X4425880544259038Ratregion
5504484PMC22111P1619X3179606331796681Ratregion
5504076px-6e9104X3887946638879569Ratregion
5504107px-5g3194X3887937238879565Ratregion
5504212RH15676190X3994207239942261Ratregion
5504300D8S1373E183X4011871340118895Ratregion
5504893ha31131037X2853568128537003Ratregion
5505237Phka284X3597141235971495Ratregion
5505085Hnrnpd263X3358066133580919Ratregion
5506771G45234231X2634080326341033Ratregion
5507065UniSTS:224320161X3994096939941129Ratregion
5506997fi17a01.x10X3431553334316209Ratregion
5500577RH136048197X4019081640191013Ratregion
5500163D14Mit171875X4363145743632331Ratregion
5500643RH136436200X3364875333648952Ratregion
5501197PMC153757P1249X3511091635111164Ratregion
5505468UniSTS:530593204X4028732840287531Ratregion
5501842MARC_15341-15342:1017678837:1217X2159246621593358Ratregion
5501978MARC_21748-21749:1023808694:5266X3184776431848029Ratregion
5502821TMSB4X218X2859502928595246Ratregion
5502825GPM6B166X2962132929621494Ratregion
5502827GLRA2296X3083086630831161Ratregion
5502451RH124898225X3364873733648961Ratregion
Position Markers

Flank 1: (DXRat8)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X21,592,623 - 21,592,783NCBI
Rnor_5.0X21,859,080 - 21,859,240UniSTS
RGSC_v3.4X41,386,788 - 41,387,080RGD
RGSC_v3.4X41,386,879 - 41,387,039UniSTS
RGSC_v3.1X41,440,348 - 41,440,508RGD
CeleraX21,272,130 - 21,272,290UniSTS
Cytogenetic MapXq21UniSTS
RH 3.4 MapX186.31UniSTS
RH 3.4 MapX186.31RGD
RH 2.0 Map21223.4RGD
SHRSP x BN MapX6.8999RGD
FHH x ACI MapX7.93RGD
Peak: (DXRat25)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X34,424,518 - 34,424,634NCBI
Rnor_5.0X34,768,466 - 34,768,582UniSTS
CeleraX32,956,567 - 32,956,683UniSTS
Cytogenetic MapXq21UniSTS
RH 3.4 MapX474.4UniSTS
RH 3.4 MapX474.4RGD
RH 2.0 Map21361.4RGD
FHH x ACI MapX14.5099RGD
Flank 2: (DXRat11)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0X44,320,616 - 44,320,739NCBI
Rnor_5.0X44,619,917 - 44,620,040UniSTS
RGSC_v3.4X62,691,290 - 62,691,410RGD
RGSC_v3.4X62,691,291 - 62,691,414UniSTS
RGSC_v3.1X62,744,759 - 62,744,879RGD
CeleraX41,711,842 - 41,711,965UniSTS
RH 3.4 MapX575.2UniSTS
RH 3.4 MapX575.2RGD
RH 2.0 Map21465.1RGD
SHRSP x BN MapX14.89RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X144092703Rat
634325Bw13Body weight QTL 130body mass (VT:0001259)body weight (CMO:0000012)X166245321592783Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X166260933443848Rat
631204Gluco15Glucose level QTL 150.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X183816624331837Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X428214049282140Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X595407850954078Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X15688119127888215Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1815335263153352Rat
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2159262344320739Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2159262344468300Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X44320616158345622Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general parental S allele was responsible for impaired cognitive performance 1581615
qtl_general this region affects spatial accuracy performance without changing acquisition performance 1581615