LOC120099497 (small nucleolar RNA SNORA17) - Rat Genome Database

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Gene: LOC120099497 (small nucleolar RNA SNORA17) Rattus norvegicus
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Symbol: LOC120099497
Name: small nucleolar RNA SNORA17
RGD ID: 41286795
Description:
Type: snorna
RefSeq Status: MODEL
Previously known as: AABR07038114.1
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X41,400,734 - 41,400,864 (-)NCBIGRCr8
mRatBN7.2X37,585,680 - 37,585,810 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX37,585,680 - 37,585,810 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0 EnsemblX40,433,948 - 40,434,078 (-)NCBIRnor6.0rn6Rnor6.0
Cytogenetic MapXq21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2099094741052531Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2099094741203591Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
RefSeq Transcripts XR_005498666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSRNOT00000082189
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX37,585,680 - 37,585,810 (-)Ensembl
RefSeq Acc Id: XR_005498666
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X41,400,734 - 41,400,864 (-)NCBI
mRatBN7.2X37,585,680 - 37,585,810 (-)NCBI

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



Database
Acc Id
Source(s)
BioCyc Gene G2FUF-2460 BioCyc
Ensembl Genes ENSRNOG00000056924 Ensembl
NCBI Gene LOC120099497 ENTREZGENE
PhenoGen LOC120099497 PhenoGen
RatGTEx ENSRNOG00000056924 RatGTEx
RNAcentral URS00006AF8CF RNACentral


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 LOC120099497  small nucleolar RNA SNORA17  AABR07038114.1    Data merged from RGD:15010620 737654 PROVISIONAL
2021-01-27 LOC120099497  small nucleolar RNA SNORA17      Symbol and Name status set to provisional 70820 PROVISIONAL
2019-11-08 AABR07038114.1        Symbol and Name status set to provisional 45752 PROVISIONAL