LOC120099331 (uncharacterized LOC120099331) - Rat Genome Database

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Gene: LOC120099331 (uncharacterized LOC120099331) Rattus norvegicus
Analyze
Symbol: LOC120099331
Name: uncharacterized LOC120099331
RGD ID: 41054391
Description:
Type: protein-coding
RefSeq Status: MODEL
Previously known as: uncharacterized protein LOC120099331
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X27,457,792 - 27,467,902 (+)NCBIGRCr8
mRatBN7.2X23,901,744 - 23,907,066 (+)NCBImRatBN7.2mRatBN7.2
Cytogenetic MapXq13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

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Variants in LOC120099331
56 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X143491017Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X144812931706553Rat
1298071Edpm12Estrogen-dependent pituitary mass QTL 123.2pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)X292789847927898Rat
10755455Coatc13Coat color QTL 130coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)7440600049406000Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X449454949494549Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
71116Niddm16Non-insulin dependent diabetes mellitus QTL 167.81blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X1529780260297802Rat
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2099094741052531Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2099094741203591Rat


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_063280517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000021 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_063280517   ⟹   XP_063136587
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X27,457,792 - 27,467,902 (+)NCBI
Protein Sequences
Protein RefSeqs XP_063136587 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_063136587   ⟸   XM_063280517


Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-2684 BioCyc
NCBI Gene LOC120099331 ENTREZGENE
PhenoGen LOC120099331 PhenoGen


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-01-27 LOC120099331  uncharacterized LOC120099331      Symbol and Name status set to provisional 70820 PROVISIONAL