Map3k15 (mitogen-activated protein kinase kinase kinase 15) - Rat Genome Database

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Gene: Map3k15 (mitogen-activated protein kinase kinase kinase 15) Rattus norvegicus
Analyze
Symbol: Map3k15
Name: mitogen-activated protein kinase kinase kinase 15
RGD ID: 1560603
Description: Predicted to enable MAP kinase kinase kinase activity. Predicted to be involved in JNK cascade and p38MAPK cascade. Orthologous to human MAP3K15 (mitogen-activated protein kinase kinase kinase 15); INTERACTS WITH 17beta-estradiol; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil.
Type: protein-coding
RefSeq Status: MODEL
Previously known as: AABR07038029.1; LOC501558; RGD1560603; similar to mitogen-activated protein kinase kinase kinase 15
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X38,522,143 - 38,667,746 (-)NCBIGRCr8
mRatBN7.2X34,713,150 - 34,859,054 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX34,713,175 - 34,858,807 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X37,342,251 - 37,755,373 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX37,643,169 - 37,705,263 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X37,654,122 - 38,059,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X55,912,157 - 56,042,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX35,385,725 - 35,526,200 (-)NCBICelera
Cytogenetic MapXq14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions

Genomics

Comparative Map Data
Map3k15
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X38,522,143 - 38,667,746 (-)NCBIGRCr8
mRatBN7.2X34,713,150 - 34,859,054 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX34,713,175 - 34,858,807 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0X37,342,251 - 37,755,373 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX37,643,169 - 37,705,263 (-)NCBIRnor6.0rn6Rnor6.0
Rnor_5.0X37,654,122 - 38,059,872 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X55,912,157 - 56,042,817 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
CeleraX35,385,725 - 35,526,200 (-)NCBICelera
Cytogenetic MapXq14NCBI
MAP3K15
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X19,360,059 - 19,515,508 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX19,360,056 - 19,515,508 (-)EnsemblGRCh38hg38GRCh38
GRCh37X19,378,177 - 19,533,626 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X19,288,095 - 19,410,315 (-)NCBINCBI36Build 36hg18NCBI36
Build 34X19,137,830 - 19,260,051NCBI
CeleraX23,499,514 - 23,656,927 (-)NCBICelera
Cytogenetic MapXp22.12NCBI
HuRefX17,127,352 - 17,281,966 (-)NCBIHuRef
CHM1_1X19,409,233 - 19,563,759 (-)NCBICHM1_1
T2T-CHM13v2.0X18,942,795 - 19,098,393 (-)NCBIT2T-CHM13v2.0
Map3k15
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X158,771,200 - 158,906,342 (+)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX158,771,429 - 158,906,347 (+)EnsemblGRCm39 Ensembl
GRCm38X159,988,204 - 160,123,346 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX159,988,433 - 160,123,351 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X156,426,365 - 156,561,283 (+)NCBIGRCm37MGSCv37mm9NCBIm37
CeleraX143,246,363 - 143,367,779 (+)NCBICelera
Cytogenetic MapXF4NCBI
cM MapX73.95NCBI
Map3k15
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555865,345 - 99,534 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555865,856 - 99,662 (+)NCBIChiLan1.0ChiLan1.0
MAP3K15
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X21,160,443 - 21,315,845 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X21,163,833 - 21,319,232 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X11,984,867 - 12,137,090 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X19,346,814 - 19,518,249 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX19,346,814 - 19,518,249 (-)Ensemblpanpan1.1panPan2
MAP3K15
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X15,353,081 - 15,465,862 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX15,353,081 - 15,465,992 (-)EnsemblCanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0X15,301,710 - 15,425,913 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX15,312,525 - 15,426,249 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X15,362,476 - 15,474,546 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X15,364,256 - 15,476,439 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X15,419,523 - 15,543,818 (-)NCBIUU_Cfam_GSD_1.0
Map3k15
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X8,417,779 - 8,469,243 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936844905,658 - 956,879 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936844905,249 - 958,946 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MAP3K15
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX15,715,991 - 15,867,120 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X15,716,898 - 15,867,377 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X16,964,353 - 17,118,068 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MAP3K15
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X17,820,316 - 17,981,894 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX17,819,474 - 17,981,402 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605619,688,358 - 19,839,732 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Map3k15
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248294,169,717 - 4,318,578 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248294,169,679 - 4,318,966 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:61
Count of miRNA genes:54
Interacting mature miRNAs:55
Transcripts:ENSRNOT00000043666
Prediction methods:Microtar, Miranda, Pita, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598873Memor2Memory QTL 22.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)X2447036044931007Rat
70165Bp64Blood pressure QTL 645.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X400149344939387Rat
2290375Gluco34Glucose level QTL 342.75blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)X2447036045082063Rat
731181Uae27Urinary albumin excretion QTL 272.70.0059urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)X197044046970440Rat
631666Iddm5Insulin dependent diabetes mellitus QTL 5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)X811148653111486Rat

Markers in Region
RH144512  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,574,449 - 35,574,584 (-)MAPPERmRatBN7.2
Rnor_6.0X37,518,533 - 37,518,667NCBIRnor6.0
Rnor_5.0X37,823,441 - 37,823,575UniSTSRnor5.0
RGSC_v3.4X56,776,439 - 56,776,573UniSTSRGSC3.4
CeleraX36,225,755 - 36,225,889UniSTS
RH 3.4 MapX520.0UniSTS
Cytogenetic MapXq21UniSTS
AI170398  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X34,714,460 - 34,714,644 (+)MAPPERmRatBN7.2
Rnor_6.0X37,343,562 - 37,343,745NCBIRnor6.0
Rnor_5.0X37,654,508 - 37,654,691UniSTSRnor5.0
RGSC_v3.4X55,913,471 - 55,913,654UniSTSRGSC3.4
CeleraX35,387,036 - 35,387,219UniSTS
RH 3.4 MapX500.8UniSTS
Cytogenetic MapXq21UniSTS
A010B08  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,548,043 - 35,548,309 (-)MAPPERmRatBN7.2
Rnor_6.0X37,544,779 - 37,545,044NCBIRnor6.0
Rnor_5.0X37,849,687 - 37,849,952UniSTSRnor5.0
RGSC_v3.4X56,749,904 - 56,750,169UniSTSRGSC3.4
CeleraX36,199,413 - 36,199,678UniSTS
Cytogenetic MapXq21UniSTS
RH127412  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,498,744 - 35,498,924 (-)MAPPERmRatBN7.2
Rnor_6.0X37,595,074 - 37,595,253NCBIRnor6.0
Rnor_5.0X37,899,982 - 37,900,161UniSTSRnor5.0
RGSC_v3.4X56,700,195 - 56,700,374UniSTSRGSC3.4
CeleraX36,150,116 - 36,150,295UniSTS
RH 3.4 MapX517.7UniSTS
Cytogenetic MapXq21UniSTS
RH129200  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,498,604 - 35,498,793 (-)MAPPERmRatBN7.2
Rnor_6.0X37,595,205 - 37,595,393NCBIRnor6.0
Rnor_5.0X37,900,113 - 37,900,301UniSTSRnor5.0
RGSC_v3.4X56,700,055 - 56,700,243UniSTSRGSC3.4
CeleraX36,149,976 - 36,150,164UniSTS
RH 3.4 MapX518.7UniSTS
Cytogenetic MapXq21UniSTS
RH131579  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X34,715,625 - 34,715,819 (+)MAPPERmRatBN7.2
Rnor_6.0X37,344,727 - 37,344,920NCBIRnor6.0
Rnor_5.0X37,655,673 - 37,655,866UniSTSRnor5.0
RGSC_v3.4X55,914,636 - 55,914,829UniSTSRGSC3.4
CeleraX35,388,201 - 35,388,394UniSTS
RH 3.4 MapX499.2UniSTS
Cytogenetic MapXq21UniSTS
RH142521  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,615,816 - 35,615,951 (-)MAPPERmRatBN7.2
Rnor_6.0X37,476,825 - 37,476,959NCBIRnor6.0
Rnor_5.0X37,783,256 - 37,783,390UniSTSRnor5.0
RGSC_v3.4X56,817,524 - 56,817,658UniSTSRGSC3.4
CeleraX36,267,020 - 36,267,154UniSTS
RH 3.4 MapX520.41UniSTS
Cytogenetic MapXq21UniSTS
AA819807  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X34,713,892 - 34,714,106 (+)MAPPERmRatBN7.2
mRatBN7.21682,511,694 - 82,511,908 (-)MAPPERmRatBN7.2
mRatBN7.2X34,713,892 - 34,714,106 (-)MAPPERmRatBN7.2
mRatBN7.21682,511,694 - 82,511,908 (+)MAPPERmRatBN7.2
Rnor_6.0X37,342,994 - 37,343,207NCBIRnor6.0
Rnor_6.01688,344,652 - 88,344,865NCBIRnor6.0
Rnor_5.01687,741,383 - 87,741,596UniSTSRnor5.0
Rnor_5.0X37,653,940 - 37,654,153UniSTSRnor5.0
RGSC_v3.4X55,912,903 - 55,913,116UniSTSRGSC3.4
RGSC_v3.41687,958,417 - 87,958,630UniSTSRGSC3.4
Celera1680,231,365 - 80,231,578UniSTS
CeleraX35,386,468 - 35,386,681UniSTS
Cytogenetic MapXq21UniSTS
RH137600  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X35,496,906 - 35,497,044 (-)MAPPERmRatBN7.2
Rnor_6.0X37,596,954 - 37,597,091NCBIRnor6.0
Rnor_5.0X37,901,862 - 37,901,999UniSTSRnor5.0
RGSC_v3.4X56,698,357 - 56,698,494UniSTSRGSC3.4
CeleraX36,148,278 - 36,148,415UniSTS
RH 3.4 MapX521.51UniSTS
Cytogenetic MapXq21UniSTS
RH141520  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21682,512,559 - 82,512,740 (-)MAPPERmRatBN7.2
mRatBN7.21682,512,559 - 82,512,740 (+)MAPPERmRatBN7.2
mRatBN7.2X34,713,049 - 34,713,230 (-)MAPPERmRatBN7.2
mRatBN7.2X34,713,049 - 34,713,230 (+)MAPPERmRatBN7.2
Rnor_6.0X37,342,151 - 37,342,331NCBIRnor6.0
Rnor_6.01688,345,517 - 88,345,697NCBIRnor6.0
Rnor_5.0X37,653,097 - 37,653,277UniSTSRnor5.0
Rnor_5.01687,742,248 - 87,742,428UniSTSRnor5.0
RGSC_v3.4X55,912,060 - 55,912,240UniSTSRGSC3.4
RGSC_v3.41687,959,282 - 87,959,462UniSTSRGSC3.4
Celera1680,232,230 - 80,232,410UniSTS
CeleraX35,385,625 - 35,385,805UniSTS
RH 3.4 MapX503.51UniSTS
Cytogenetic Map16q12.5UniSTS
Cytogenetic MapXq21UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSRNOT00000043666   ⟹   ENSRNOP00000050378
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 EnsemblX34,713,175 - 34,858,807 (-)Ensembl
RefSeq Acc Id: XM_039100568   ⟹   XP_038956496
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8X38,522,143 - 38,667,746 (-)NCBI
mRatBN7.2X34,713,150 - 34,859,054 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038956496 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000050378.6
RefSeq Acc Id: XP_038956496   ⟸   XM_039100568
- UniProtKB: F1LUY7 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000050378   ⟸   ENSRNOT00000043666
Protein Domains
Protein kinase   SAM

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-F1LUY7-F1-model_v2 AlphaFold F1LUY7 1-637 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1560603 AgrOrtholog
BioCyc Gene G2FUF-2491 BioCyc
Ensembl Genes ENSRNOG00000025290 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000043666.6 UniProtKB/TrEMBL
Gene3D-CATH Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro DRHyd-ASK UniProtKB/TrEMBL
  HisK-N-like UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  MAP3K_PH UniProtKB/TrEMBL
  MAP3K_TRAF-bd UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Protein_kinase_ATP_BS UniProtKB/TrEMBL
  SAM UniProtKB/TrEMBL
  SAM/pointed_sf UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene 501558 ENTREZGENE
PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 15 UniProtKB/TrEMBL
  SERINE/THREONINE PROTEIN KINASE UniProtKB/TrEMBL
Pfam ASK_PH UniProtKB/TrEMBL
  DRHyd-ASK UniProtKB/TrEMBL
  DUF4071 UniProtKB/TrEMBL
  HisK-N-like UniProtKB/TrEMBL
  Pkinase UniProtKB/TrEMBL
PhenoGen Map3k15 PhenoGen
PROSITE PROTEIN_KINASE_ATP UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
  SAM_DOMAIN UniProtKB/TrEMBL
RatGTEx ENSRNOG00000025290 RatGTEx
SMART S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF47769 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt F1LUY7 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-06-02 Map3k15  mitogen-activated protein kinase kinase kinase 15  AABR07038029.1    Data merged from RGD:15003610 737654 PROVISIONAL
2019-11-08 AABR07038029.1        Symbol and Name status set to provisional 45752 PROVISIONAL
2012-10-11 Map3k15  mitogen-activated protein kinase kinase kinase 15  RGD1560603  similar to mitogen-activated protein kinase kinase kinase 15  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-04-30 RGD1560603  similar to mitogen-activated protein kinase kinase kinase 15   RGD1560603_predicted  similar to mitogen-activated protein kinase kinase kinase 15 (predicted)  'predicted' is removed 2292626 APPROVED
2006-03-07 RGD1560603_predicted  similar to mitogen-activated protein kinase kinase kinase 15 (predicted)  LOC501558  similar to mitogen-activated protein kinase kinase kinase 15  Symbol and Name status set to approved 1299863 APPROVED
2006-02-09 LOC501558  similar to mitogen-activated protein kinase kinase kinase 15      Symbol and Name status set to provisional 70820 PROVISIONAL